AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1117880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1117880 MtrunA17_Chr7g0254981 89.286 280 5 3 1 256 1 279 8.16e-177 487
Msa1117880 MtrunA17_Chr2g0291021 47.980 198 61 5 1 166 1 188 1.66e-49 166
Msa1117880 MtrunA17_Chr8g0356501 47.619 147 53 5 48 170 37 183 1.61e-33 124
Msa1117880 MtrunA17_Chr5g0409731 44.755 143 48 2 48 159 25 167 4.91e-33 122
Msa1117880 MtrunA17_Chr7g0261911 45.161 155 62 3 31 162 241 395 1.87e-32 124
Msa1117880 MtrunA17_Chr1g0175091 41.667 156 58 4 31 165 249 392 5.93e-32 121
Msa1117880 MtrunA17_Chr4g0042451 45.139 144 49 3 47 160 16 159 3.81e-31 117
Msa1117880 MtrunA17_Chr2g0310011 50.388 129 40 3 48 153 35 162 7.41e-31 117
Msa1117880 MtrunA17_Chr7g0258551 40.580 138 64 2 46 165 210 347 6.65e-30 115
Msa1117880 MtrunA17_Chr7g0274471 42.336 137 54 2 48 162 218 351 1.67e-29 115
Msa1117880 MtrunA17_Chr2g0321461 38.776 196 76 6 47 201 44 236 5.40e-29 113
Msa1117880 MtrunA17_Chr5g0417521 45.517 145 48 5 47 160 14 158 7.90e-29 112
Msa1117880 MtrunA17_Chr1g0190301 46.324 136 48 4 47 160 174 306 8.70e-29 112
Msa1117880 MtrunA17_Chr6g0461641 36.923 195 83 5 47 204 41 232 1.31e-28 112
Msa1117880 MtrunA17_Chr7g0242521 46.970 132 41 4 48 154 13 140 6.41e-28 107
Msa1117880 MtrunA17_Chr1g0197171 42.963 135 49 2 48 154 44 178 2.62e-27 106
Msa1117880 MtrunA17_Chr2g0290991 47.619 126 44 4 48 152 39 163 5.86e-26 103
Msa1117880 MtrunA17_Chr1g0175081 52.941 68 31 1 50 117 24 90 3.19e-21 85.5
Msa1117880 MtrunA17_Chr1g0175071 34.815 135 70 2 45 161 174 308 8.68e-20 87.0
Msa1117880 MtrunA17_Chr7g0243081 44.681 94 43 1 22 106 36 129 3.09e-18 82.8
Msa1117880 MtrunA17_Chr2g0288601 59.091 66 27 0 40 105 63 128 8.16e-18 77.4
Msa1117880 MtrunA17_Chr6g0479431 57.576 66 26 1 50 113 204 269 2.27e-17 80.5
Msa1117880 MtrunA17_Chr2g0320231 65.000 60 20 1 50 109 99 157 1.76e-16 78.2
Msa1117880 MtrunA17_Chr8g0366281 56.452 62 27 0 50 111 175 236 2.27e-16 77.8
Msa1117880 MtrunA17_Chr8g0379121 63.636 55 20 0 50 104 113 167 2.68e-16 77.8
Msa1117880 MtrunA17_Chr3g0109981 63.636 55 20 0 50 104 276 330 5.61e-16 77.0
Msa1117880 MtrunA17_Chr5g0410741 61.818 55 21 0 50 104 221 275 9.40e-16 76.3
Msa1117880 MtrunA17_Chr1g0154261 60.000 55 22 0 50 104 128 182 1.16e-15 75.1
Msa1117880 MtrunA17_Chr3g0095611 47.222 72 38 0 33 104 4 75 2.45e-15 72.8
Msa1117880 MtrunA17_Chr1g0162931 67.308 52 17 0 50 101 20 71 3.05e-15 73.6
Msa1117880 MtrunA17_Chr1g0210911 65.385 52 18 0 50 101 24 75 3.40e-15 73.9
Msa1117880 MtrunA17_Chr1g0198601 55.385 65 29 0 48 112 211 275 4.70e-15 73.9
Msa1117880 MtrunA17_Chr4g0009981 52.174 69 30 2 46 114 114 179 3.33e-14 70.5
Msa1117880 MtrunA17_Chr5g0402631 63.636 55 20 0 48 102 214 268 4.90e-14 70.9
Msa1117880 MtrunA17_Chr4g0009901 42.529 87 47 2 40 126 160 243 5.66e-14 70.1
Msa1117880 MtrunA17_Chr7g0258531 47.222 72 32 1 48 113 213 284 6.48e-14 70.5
Msa1117880 MtrunA17_Chr4g0009851 47.368 76 37 2 39 114 160 232 1.06e-13 69.7
Msa1117880 MtrunA17_Chr4g0045361 49.315 73 36 1 40 111 266 338 1.35e-13 70.1
Msa1117880 MtrunA17_Chr2g0283951 63.265 49 18 0 50 98 91 139 1.66e-13 69.3
Msa1117880 MtrunA17_Chr5g0422621 55.172 58 26 0 45 102 195 252 6.81e-13 67.8
Msa1117880 MtrunA17_Chr4g0062921 55.000 60 27 0 48 107 235 294 1.14e-12 67.4
Msa1117880 MtrunA17_Chr4g0067981 56.364 55 23 1 48 102 215 268 2.94e-12 66.2
Msa1117880 MtrunA17_Chr1g0161431 54.545 55 24 1 48 102 200 253 4.80e-12 65.5
Msa1117880 MtrunA17_Chr7g0255711 51.613 62 29 1 41 102 84 144 1.11e-11 63.5
Msa1117880 MtrunA17_Chr8g0376881 46.341 82 32 3 48 129 209 278 3.51e-11 62.8
Msa1117880 MtrunA17_Chr5g0400241 39.535 86 48 2 19 104 285 366 3.69e-11 62.8
Msa1117880 MtrunA17_Chr2g0294911 50.909 55 26 1 48 102 211 264 4.00e-11 62.8
Msa1117880 MtrunA17_Chr6g0471041 46.154 65 32 2 39 103 165 226 5.22e-11 62.4
Msa1117880 MtrunA17_Chr4g0040481 49.123 57 28 1 45 101 155 210 6.72e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1117880 AT2G01060.1 63.571 140 27 2 48 165 15 152 7.64e-52 171
Msa1117880 AT4G13640.1 47.222 144 45 3 48 160 37 180 3.01e-33 122
Msa1117880 AT3G24120.1 46.528 144 46 3 48 160 41 184 3.68e-33 122
Msa1117880 AT4G13640.2 46.259 147 45 3 48 160 37 183 4.84e-33 122
Msa1117880 AT3G13040.3 41.667 156 67 1 43 174 236 391 6.33e-33 125
Msa1117880 AT3G13040.1 41.667 156 67 1 43 174 236 391 6.33e-33 125
Msa1117880 AT3G13040.2 41.667 156 67 1 43 174 236 391 6.33e-33 125
Msa1117880 AT3G24120.2 45.578 147 46 3 48 160 41 187 1.05e-32 121
Msa1117880 AT5G29000.1 42.466 146 62 1 38 161 178 323 1.47e-32 122
Msa1117880 AT5G29000.3 42.466 146 62 1 38 161 178 323 1.47e-32 122
Msa1117880 AT5G29000.2 42.466 146 62 1 38 161 221 366 1.98e-32 123
Msa1117880 AT1G79430.2 50.000 132 42 3 48 156 34 164 6.51e-32 120
Msa1117880 AT3G04450.4 37.563 197 87 4 42 208 191 381 9.62e-32 121
Msa1117880 AT3G04450.2 37.563 197 87 4 42 208 191 381 9.62e-32 121
Msa1117880 AT3G04450.1 37.696 191 84 3 47 208 237 421 1.35e-31 121
Msa1117880 AT5G06800.1 44.853 136 49 2 47 160 191 322 4.40e-31 119
Msa1117880 AT4G28610.1 45.985 137 50 2 44 158 221 355 5.20e-31 119
Msa1117880 AT5G06800.2 44.526 137 53 2 47 160 191 327 1.48e-30 117
Msa1117880 AT5G18240.2 45.070 142 50 3 47 160 44 185 1.75e-30 117
Msa1117880 AT5G18240.3 45.070 142 50 3 47 160 44 185 1.75e-30 117
Msa1117880 AT5G18240.1 44.595 148 48 3 47 160 44 191 1.90e-30 117
Msa1117880 AT5G18240.4 44.595 148 48 3 47 160 44 191 1.90e-30 117
Msa1117880 AT3G04030.3 41.892 148 52 3 47 160 44 191 2.62e-30 117
Msa1117880 AT1G69580.1 40.385 156 54 4 47 166 33 185 4.33e-30 115
Msa1117880 AT3G04030.1 42.254 142 54 3 47 160 44 185 5.58e-30 116
Msa1117880 AT1G69580.2 40.127 157 54 4 47 166 33 186 7.02e-30 114
Msa1117880 AT5G18240.5 43.836 146 50 3 47 160 44 189 1.18e-29 115
Msa1117880 AT5G45580.2 40.113 177 55 5 27 160 4 172 1.29e-29 112
Msa1117880 AT5G45580.1 42.208 154 44 4 48 160 7 156 1.92e-29 112
Msa1117880 AT3G04030.2 41.216 148 52 4 47 160 44 190 9.63e-28 110
Msa1117880 AT3G12730.1 40.876 137 54 3 48 157 23 159 2.00e-27 105
Msa1117880 AT2G20400.1 46.154 130 51 2 48 158 231 360 6.80e-27 107
Msa1117880 AT2G01060.2 56.190 105 22 2 83 165 1 103 1.52e-26 103
Msa1117880 AT2G20400.2 46.212 132 49 3 48 158 231 361 2.59e-26 106
Msa1117880 AT5G29000.4 59.722 72 29 0 38 109 221 292 3.31e-25 102
Msa1117880 AT3G04450.3 67.742 62 20 0 47 108 237 298 4.82e-25 101
Msa1117880 AT5G06800.3 63.492 63 23 0 47 109 191 253 1.58e-24 99.4
Msa1117880 AT2G06020.1 54.667 75 30 2 33 104 69 142 6.85e-20 87.4
Msa1117880 AT2G42660.1 57.895 76 31 1 39 113 41 116 2.94e-19 84.7
Msa1117880 AT4G04605.1 58.667 75 30 1 50 124 16 89 4.05e-19 83.6
Msa1117880 AT5G42630.2 52.564 78 36 1 50 126 107 184 2.28e-18 81.6
Msa1117880 AT2G02060.2 56.944 72 31 0 30 101 11 82 2.30e-18 82.4
Msa1117880 AT2G02060.1 56.944 72 31 0 30 101 11 82 2.30e-18 82.4
Msa1117880 AT5G42630.1 57.143 70 29 1 50 118 107 176 4.32e-18 82.0
Msa1117880 AT2G40260.1 54.795 73 33 0 40 112 74 146 5.62e-18 83.2
Msa1117880 AT2G38300.1 56.923 65 28 0 40 104 46 110 1.42e-16 78.6
Msa1117880 AT5G16560.1 57.576 66 26 1 50 113 221 286 2.91e-16 78.2
Msa1117880 AT1G32240.1 61.818 55 21 0 50 104 215 269 8.52e-16 76.6
Msa1117880 AT1G14600.1 52.778 72 34 0 30 101 5 76 8.73e-16 75.1
Msa1117880 AT1G32240.2 61.818 55 21 0 50 104 215 269 8.89e-16 76.3
Msa1117880 AT1G13300.1 57.812 64 27 0 44 107 177 240 2.95e-15 74.7
Msa1117880 AT4G17695.1 60.000 55 22 0 50 104 166 220 3.53e-15 74.3
Msa1117880 AT4G04580.1 59.615 52 21 0 50 101 16 67 9.72e-15 70.5
Msa1117880 AT4G37180.1 44.118 102 48 3 48 140 210 311 7.64e-14 70.9
Msa1117880 AT4G37180.2 44.118 102 48 3 48 140 217 318 8.77e-14 70.5
Msa1117880 AT2G01760.3 45.333 75 38 2 44 118 131 202 1.43e-13 69.7
Msa1117880 AT5G18240.6 39.450 109 38 3 80 160 1 109 2.38e-13 68.9
Msa1117880 AT2G01760.1 45.333 75 38 2 44 118 196 267 2.44e-13 69.3
Msa1117880 AT1G25550.1 53.968 63 29 0 48 110 209 271 2.82e-13 68.9
Msa1117880 AT2G01760.2 45.333 75 38 2 44 118 224 295 3.67e-13 68.9
Msa1117880 AT1G49560.1 58.065 62 26 0 48 109 192 253 4.20e-13 68.6
Msa1117880 AT3G10760.1 41.758 91 52 1 12 102 69 158 5.60e-13 68.2
Msa1117880 AT3G25790.1 56.364 55 24 0 53 107 201 255 7.30e-13 67.8
Msa1117880 AT1G79430.1 43.000 100 33 3 80 156 1 99 7.40e-13 67.4
Msa1117880 AT3G04030.4 36.697 109 41 3 80 160 1 109 1.55e-12 66.6
Msa1117880 AT5G05090.1 51.613 62 29 1 41 102 74 134 2.85e-12 65.5
Msa1117880 AT2G40970.1 43.333 90 44 2 13 102 76 158 5.17e-12 64.3
Msa1117880 AT2G03500.1 55.000 60 27 0 48 107 233 292 5.72e-12 65.5
Msa1117880 AT1G68670.1 55.000 60 27 0 48 107 215 274 1.19e-11 64.3
Msa1117880 AT4G37180.3 53.448 58 27 0 48 105 210 267 1.93e-11 63.2
Msa1117880 AT3G16857.3 52.727 55 25 1 48 102 167 220 2.07e-11 63.9
Msa1117880 AT1G67710.3 44.706 85 40 3 50 134 121 198 2.23e-11 63.9
Msa1117880 AT3G16857.1 52.727 55 25 1 48 102 237 290 2.42e-11 63.9
Msa1117880 AT3G16857.2 52.727 55 25 1 48 102 237 290 2.49e-11 63.9
Msa1117880 AT1G67710.2 44.706 85 40 3 50 134 130 207 2.65e-11 63.5
Msa1117880 AT1G67710.1 44.706 85 40 3 50 134 195 272 3.36e-11 63.5
Msa1117880 AT4G04555.1 56.000 50 22 0 52 101 18 67 4.52e-11 58.9
Msa1117880 AT5G58080.1 39.796 98 51 3 43 140 189 278 4.94e-11 63.2

Find 90 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTGGAGACAGCATTTC+TGG 0.169125 7_3:-66333791 Msa1117880:CDS
CAGCCCCTATCAGAGCCTTC+TGG 0.281442 7_3:-66332686 Msa1117880:CDS
TCATGTTAAAAGCCATTTAC+AGG 0.288705 7_3:-66334090 Msa1117880:intron
TTACCATCACCTGGTGATTC+AGG 0.291103 7_3:+66333943 None:intergenic
AAGAATTAGTTTCTGTTTGT+AGG 0.306362 7_3:-66332445 Msa1117880:three_prime_UTR
GGGTCTAGTGATGCCCTTGC+AGG 0.311416 7_3:-66332665 Msa1117880:CDS
AAAGATGAGAAAAGGAATTC+TGG 0.312253 7_3:-66333806 Msa1117880:CDS
CACATATTGATACCTGTAAA+TGG 0.320680 7_3:+66334078 None:intergenic
AGTGAAACTTGTTAATATCT+TGG 0.325989 7_3:+66332082 None:intergenic
AAATTGAAGCATTCAGAATC+TGG 0.331873 7_3:+66337716 None:intergenic
TGCTGGCTATGGATTTGATT+TGG 0.345238 7_3:-66332504 Msa1117880:CDS
GTATCATGCAAAGAAGTTTC+CGG 0.366560 7_3:-66337496 Msa1117880:CDS
GCATCGTCTTCATACAAGTT+TGG 0.374272 7_3:+66332524 None:intergenic
GAGCAGTCTTTCTTGTAACT+TGG 0.380002 7_3:+66332579 None:intergenic
TAGACCCAGAAGGCTCTGAT+AGG 0.397855 7_3:+66332681 None:intergenic
ATCACTCTCAAAACACCTTT+CGG 0.400760 7_3:+66334137 None:intergenic
TGATTGTGATGTTGGTCCTT+TGG 0.405745 7_3:-66332549 Msa1117880:CDS
TTGTCATCATTTATTATGTT+CGG 0.411164 7_3:-66332208 Msa1117880:three_prime_UTR
CTGGCGCTGATTCTTCCCCA+TGG 0.437477 7_3:-66333772 Msa1117880:CDS
TTGAGAGTGATGGGTGTGCC+TGG 0.439476 7_3:-66334125 Msa1117880:CDS
TACATCAAATAAATTTATAG+AGG 0.441978 7_3:+66338187 None:intergenic
AGCAGTCTTTCTTGTAACTT+GGG 0.448297 7_3:+66332580 None:intergenic
GTCGATGCTATTACGCAGCT+TGG 0.451599 7_3:-66337315 Msa1117880:CDS
GTGAACAGTTTGCAAATGGT+GGG 0.466595 7_3:-66337431 Msa1117880:CDS
TCTACATTAATATATACAAA+TGG 0.467748 7_3:+66332349 None:intergenic
CAGATTCTAAAGATGAGAAA+AGG 0.474395 7_3:-66333814 Msa1117880:CDS
TGGCGCTGATTCTTCCCCAT+GGG 0.475638 7_3:-66333771 Msa1117880:intron
AAATCTCAAGGCGGTGGTGG+TGG 0.477044 7_3:-66337453 Msa1117880:CDS
GTACATGTGGCGATGAATGC+TGG 0.478788 7_3:-66332246 Msa1117880:three_prime_UTR
AGCCCCTATCAGAGCCTTCT+GGG 0.481660 7_3:-66332685 Msa1117880:CDS
GCGTAATAGCATCGACAAAA+CGG 0.482228 7_3:+66337322 None:intergenic
CTTCTGCAAGTATTTACCCT+GGG 0.483213 7_3:+66332787 None:intergenic
GGTGAACAGTTTGCAAATGG+TGG 0.483332 7_3:-66337432 Msa1117880:CDS
GTTCAACCTGCTGGAGGTGG+TGG 0.495717 7_3:-66337381 Msa1117880:CDS
TATGAAGACGATGCTGGCTA+TGG 0.503534 7_3:-66332515 Msa1117880:CDS
ATATATACAAATGGATTGCA+TGG 0.506158 7_3:+66332358 None:intergenic
TGTAGCATCATCGTCTCCTC+CGG 0.509828 7_3:+66337477 None:intergenic
AGACCCAGAAGGCTCTGATA+GGG 0.512319 7_3:+66332682 None:intergenic
CAGAAGGCTCTGATAGGGGC+TGG 0.517321 7_3:+66332687 None:intergenic
TGCTTCCCACCACCTCCAGC+AGG 0.519989 7_3:+66337375 None:intergenic
GTGGGAAGCAGCGTTTGCGT+TGG 0.522000 7_3:-66337362 Msa1117880:CDS
GATGCTATTACGCAGCTTGG+TGG 0.523773 7_3:-66337312 Msa1117880:CDS
GTAATGAGATTGAGGATTAG+TGG 0.525216 7_3:+66337809 None:intergenic
GAGAATTGATGAAGGTTCAA+AGG 0.527042 7_3:-66332618 Msa1117880:CDS
AGGTAGTACCTTGGCAGCAT+CGG 0.527216 7_3:-66332741 Msa1117880:CDS
CAGAAGAATGATTGTGATGT+TGG 0.531947 7_3:-66332557 Msa1117880:CDS
ACAAATGAGAATTGAAGCCC+AGG 0.536357 7_3:-66332804 Msa1117880:CDS
GAACAGTTTGCAAATGGTGG+GGG 0.537010 7_3:-66337429 Msa1117880:CDS
CATAAATCTCAAGGCGGTGG+TGG 0.541663 7_3:-66337456 Msa1117880:CDS
ATAGAGGAACAGCAGAAACT+AGG 0.544970 7_3:-66332761 Msa1117880:CDS
ATTGATGAAGGTTCAAAGGA+TGG 0.546371 7_3:-66332614 Msa1117880:CDS
ATTCAGGCAAGTACTTCGCC+AGG 0.553148 7_3:+66333959 None:intergenic
TGATCTTTGTAGTCAACTTG+TGG 0.554077 7_3:-66332130 Msa1117880:three_prime_UTR
TGAACAGTTTGCAAATGGTG+GGG 0.557194 7_3:-66337430 Msa1117880:CDS
GGGAAAGTGTAATGAGATTG+AGG 0.557969 7_3:+66337801 None:intergenic
CTACATGTAGAAGTATCGCC+TGG 0.558759 7_3:-66333977 Msa1117880:intron
AAGTGTTTCCGATGCTGCCA+AGG 0.559809 7_3:+66332733 None:intergenic
TCAACTTGTGGTATATAACT+TGG 0.562621 7_3:-66332118 Msa1117880:three_prime_UTR
GAATCACCAGGTGATGGTAA+AGG 0.568026 7_3:-66333940 Msa1117880:intron
TCATACAAGTTTGGATCCAA+AGG 0.570266 7_3:+66332533 None:intergenic
AAGTACTTGCCTGAATCACC+AGG 0.571352 7_3:-66333952 Msa1117880:CDS
ACATGATAAATGGTCAGTCC+AGG 0.573039 7_3:+66334107 None:intergenic
GCAGCGTTTGCGTTGGACGT+CGG 0.573253 7_3:-66337355 Msa1117880:CDS
CTTCTCTCCTGTCGTGAGAG+TGG 0.573861 7_3:-66332314 Msa1117880:three_prime_UTR
CTACATAAATCTCAAGGCGG+TGG 0.580370 7_3:-66337459 Msa1117880:CDS
GGTGGTGAACAGTTTGCAAA+TGG 0.580373 7_3:-66337435 Msa1117880:CDS
GTGTTTACCACTCTCACGAC+AGG 0.581242 7_3:+66332307 None:intergenic
AACTTGTATGAAGACGATGC+TGG 0.582842 7_3:-66332521 Msa1117880:CDS
TACATGTGGCGATGAATGCT+GGG 0.593026 7_3:-66332245 Msa1117880:three_prime_UTR
GACCCAGAAGGCTCTGATAG+GGG 0.597299 7_3:+66332683 None:intergenic
AATGTTCAACCTGCTGGAGG+TGG 0.620630 7_3:-66337384 Msa1117880:CDS
TTGCCTGAATCACCAGGTGA+TGG 0.621799 7_3:-66333946 Msa1117880:CDS
ATGATGCTACATAAATCTCA+AGG 0.630109 7_3:-66337465 Msa1117880:CDS
ATGACAGGAGCAACACCGAA+AGG 0.633323 7_3:-66334152 Msa1117880:intron
TCAAGCTTGTCAATTAGTGA+CGG 0.634724 7_3:-66332160 Msa1117880:three_prime_UTR
TGACAAGCTTGATATTGACA+TGG 0.637216 7_3:+66332171 None:intergenic
TCTTCTGCAAGTATTTACCC+TGG 0.641154 7_3:+66332786 None:intergenic
ATTTCTGTTGACTGAGAGTG+CGG 0.642747 7_3:+66332284 None:intergenic
TTTCTGTTGACTGAGAGTGC+GGG 0.644510 7_3:+66332285 None:intergenic
GCAGAAACTAGGTAGTACCT+TGG 0.646490 7_3:-66332750 Msa1117880:CDS
AAGGCACCTTTACCATCACC+TGG 0.649278 7_3:+66333934 None:intergenic
CAAATGAGAATTGAAGCCCA+GGG 0.650033 7_3:-66332803 Msa1117880:CDS
TTCAACCTGCTGGAGGTGGT+GGG 0.656162 7_3:-66337380 Msa1117880:CDS
AGGGCATCACTAGACCCAGA+AGG 0.683087 7_3:+66332671 None:intergenic
ATACTTGCAGAAGATCATAG+AGG 0.704943 7_3:-66332777 Msa1117880:CDS
ATTGACATGCATTGTACATG+TGG 0.705794 7_3:-66332259 Msa1117880:three_prime_UTR
TTGGAAACAGAAAATGACGA+CGG 0.712157 7_3:-66332485 Msa1117880:CDS
TCATGCAAAGAAGTTTCCGG+AGG 0.726416 7_3:-66337493 Msa1117880:CDS
ATGCTACATAAATCTCAAGG+CGG 0.774912 7_3:-66337462 Msa1117880:CDS
AAACAACTAAGACACCCATG+GGG 0.798673 7_3:+66333757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGAATTTGTATTTTTTTT+CGG + chr7_3:66332078-66332097 None:intergenic 10.0%
!!! AACTATTTACTATTTTTTAT+AGG - chr7_3:66332155-66332174 Msa1117880:three_prime_UTR 10.0%
!! AAAAAAAAAAGAGTTTATAT+AGG + chr7_3:66334725-66334744 None:intergenic 10.0%
!!! TGAATAATTTAAAGTTAAAA+AGG + chr7_3:66336137-66336156 None:intergenic 10.0%
!!! AATATTTTACTAATTTTACA+TGG - chr7_3:66336282-66336301 Msa1117880:intron 10.0%
!! AATATATAATTTACAAAAAC+AGG + chr7_3:66337930-66337949 None:intergenic 10.0%
!!! TTGAATTTGTATTTTTTTTC+GGG + chr7_3:66332077-66332096 None:intergenic 15.0%
!! TACATCAAATAAATTTATAG+AGG + chr7_3:66332124-66332143 None:intergenic 15.0%
!!! TTTTTTTTTTTTTGTGATTG+AGG + chr7_3:66332455-66332474 None:intergenic 15.0%
!! GTTTGTGTATATTTATATTA+TGG - chr7_3:66333155-66333174 Msa1117880:intron 15.0%
!!! TCATTAGTTTAAAATGATAA+AGG - chr7_3:66333545-66333564 Msa1117880:intron 15.0%
!!! ACCTTTTTTTAATATTTTAG+TGG - chr7_3:66336006-66336025 Msa1117880:intron 15.0%
!! TCCACTAAAATATTAAAAAA+AGG + chr7_3:66336010-66336029 None:intergenic 15.0%
!!! TTTTTTAATATTTTAGTGGA+TGG - chr7_3:66336010-66336029 Msa1117880:intron 15.0%
!!! TTGTTTTATTAAAATGTTAG+AGG + chr7_3:66336617-66336636 None:intergenic 15.0%
!! AAGAATATATAAAAAATTGC+AGG + chr7_3:66337220-66337239 None:intergenic 15.0%
!! TCTACATTAATATATACAAA+TGG + chr7_3:66337962-66337981 None:intergenic 15.0%
!!! TGAATTTGTATTTTTTTTCG+GGG + chr7_3:66332076-66332095 None:intergenic 20.0%
!! TGTGTATATTTATATTATGG+TGG - chr7_3:66333158-66333177 Msa1117880:intron 20.0%
!! GTGTATATTTATATTATGGT+GGG - chr7_3:66333159-66333178 Msa1117880:intron 20.0%
!! ATGAAAAATGAAATGCTTTA+CGG - chr7_3:66333478-66333497 Msa1117880:intron 20.0%
!! ACATTAACTCTCATATTTAA+TGG + chr7_3:66333731-66333750 None:intergenic 20.0%
!! TTAAATATGAGAGTTAATGT+TGG - chr7_3:66333731-66333750 Msa1117880:intron 20.0%
!!! CTTTTTTGTACTTGTAATAT+GGG - chr7_3:66333838-66333857 Msa1117880:intron 20.0%
!!! TTTTTTGTACTTGTAATATG+GGG - chr7_3:66333839-66333858 Msa1117880:intron 20.0%
!!! AGAATTTAAAACATTAGTAG+TGG + chr7_3:66333902-66333921 None:intergenic 20.0%
!! AAAAACAATAAAGAGAAAGA+TGG - chr7_3:66335095-66335114 Msa1117880:intron 20.0%
!! AGTAGTTAAGGAATAAAAAA+TGG + chr7_3:66335962-66335981 None:intergenic 20.0%
!!! ATTTAAAGTTAAAAAGGTCT+AGG + chr7_3:66336131-66336150 None:intergenic 20.0%
!! AACTTTAAATTATTCATGAC+AGG - chr7_3:66336141-66336160 Msa1117880:intron 20.0%
!! TACATGTAGTGATATATAAT+AGG + chr7_3:66336320-66336339 None:intergenic 20.0%
!! CTATGCTATTAGTATAAATA+AGG - chr7_3:66336733-66336752 Msa1117880:intron 20.0%
!! TTAATCATTGTTGAAGTTAT+GGG + chr7_3:66336858-66336877 None:intergenic 20.0%
!! TTTAATCATTGTTGAAGTTA+TGG + chr7_3:66336859-66336878 None:intergenic 20.0%
!! ATGATAAATAAAAGATGGTT+GGG + chr7_3:66336895-66336914 None:intergenic 20.0%
!!! TAGAAACATTTGAAGTTTTA+CGG + chr7_3:66337070-66337089 None:intergenic 20.0%
!!! TTTCAAGTTAAATTTCTTCA+CGG - chr7_3:66337135-66337154 Msa1117880:intron 20.0%
!!! TGTAGTTTCATCTAAAATAA+TGG + chr7_3:66337162-66337181 None:intergenic 20.0%
!! CTTATTTAATAGATAAGTGA+TGG + chr7_3:66337303-66337322 None:intergenic 20.0%
!!! ATCAATTCTCTGTTTTTTAT+GGG + chr7_3:66337680-66337699 None:intergenic 20.0%
!! TTGTCATCATTTATTATGTT+CGG - chr7_3:66338100-66338119 Msa1117880:intron 20.0%
!!! GTACTTTTTGGGTTTTTATT+TGG + chr7_3:66332315-66332334 None:intergenic 25.0%
!!! AAATAGGGATTTGATTTTCT+CGG + chr7_3:66332531-66332550 None:intergenic 25.0%
! TTAAATTCATCCAAGTCAAA+TGG + chr7_3:66332675-66332694 None:intergenic 25.0%
!!! AGATTAAGATGTGTTGTTTT+TGG - chr7_3:66333050-66333069 Msa1117880:intron 25.0%
!!! GTTTCTTTTTGATTGTGTTT+AGG - chr7_3:66333082-66333101 Msa1117880:intron 25.0%
! TGAAAAATGAAATGCTTTAC+GGG - chr7_3:66333479-66333498 Msa1117880:intron 25.0%
! GCATTAACTCTCATATTTAA+TGG + chr7_3:66333778-66333797 None:intergenic 25.0%
! GAATCATACCTTATATGATT+CGG - chr7_3:66333806-66333825 Msa1117880:CDS 25.0%
! ACTATTTACCGAATCATATA+AGG + chr7_3:66333817-66333836 None:intergenic 25.0%
!!! GCTTTTTTGTACTTGTAATA+TGG - chr7_3:66333837-66333856 Msa1117880:intron 25.0%
! ACAGAATATGTACTTTCATT+TGG + chr7_3:66334074-66334093 None:intergenic 25.0%
!! AAATGAAAGTACATATTCTG+TGG - chr7_3:66334073-66334092 Msa1117880:intron 25.0%
!! AGTTGATTAATTCTGTTTTG+TGG - chr7_3:66334450-66334469 Msa1117880:intron 25.0%
!!! TTTAGCTTTCAGTTTATGAA+AGG - chr7_3:66334664-66334683 Msa1117880:intron 25.0%
!! TTAGCTTTCAGTTTATGAAA+GGG - chr7_3:66334665-66334684 Msa1117880:intron 25.0%
!!! CTTTGTTTTAGTTGGTTTTT+AGG - chr7_3:66334696-66334715 Msa1117880:intron 25.0%
!!! TGTGGTATTTTAATGAAATG+TGG + chr7_3:66334795-66334814 None:intergenic 25.0%
! GTTGCATTATTAATGAAATG+TGG + chr7_3:66334813-66334832 None:intergenic 25.0%
! CTTCAAAGTCATTTCATATA+GGG + chr7_3:66334953-66334972 None:intergenic 25.0%
! ACTTCAAAGTCATTTCATAT+AGG + chr7_3:66334954-66334973 None:intergenic 25.0%
!!! GTCATTATGAAGGTTTTAAA+TGG + chr7_3:66335002-66335021 None:intergenic 25.0%
!! GTTTTTATCTCAAAAGATGA+GGG + chr7_3:66335081-66335100 None:intergenic 25.0%
!!! TGTTTTTATCTCAAAAGATG+AGG + chr7_3:66335082-66335101 None:intergenic 25.0%
!! TGATATTTGTACAACCATTT+TGG + chr7_3:66335918-66335937 None:intergenic 25.0%
! ACTTGATGTATAATCATTGT+TGG - chr7_3:66336037-66336056 Msa1117880:intron 25.0%
! ATGTATAATCATTGTTGGAA+GGG - chr7_3:66336042-66336061 Msa1117880:intron 25.0%
!! ATGGCTTTTAACATGATAAA+TGG + chr7_3:66336214-66336233 None:intergenic 25.0%
!! GACATTTCTCATAACTTTTT+AGG + chr7_3:66336423-66336442 None:intergenic 25.0%
! AAGGAGTTACAAATTATCTT+CGG + chr7_3:66336578-66336597 None:intergenic 25.0%
! TATTAAAATGTTAGAGGTAG+AGG + chr7_3:66336611-66336630 None:intergenic 25.0%
! TTTATACTAATAGCATAGCT+AGG + chr7_3:66336731-66336750 None:intergenic 25.0%
! TGCTATTAGTATAAATAAGG+AGG - chr7_3:66336736-66336755 Msa1117880:intron 25.0%
! AAAGAGAAAAATGAAGACTT+TGG + chr7_3:66336827-66336846 None:intergenic 25.0%
! ACTTCAACAATGATTAAACT+TGG - chr7_3:66336861-66336880 Msa1117880:intron 25.0%
! GATGATAAATAAAAGATGGT+TGG + chr7_3:66336896-66336915 None:intergenic 25.0%
! CACAGATGATAAATAAAAGA+TGG + chr7_3:66336900-66336919 None:intergenic 25.0%
! TATAATTCTTCATTGTCAGA+AGG + chr7_3:66337326-66337345 None:intergenic 25.0%
!!! TCAATTCTCTGTTTTTTATG+GGG + chr7_3:66337679-66337698 None:intergenic 25.0%
!!! CATCAATTCTCTGTTTTTTA+TGG + chr7_3:66337681-66337700 None:intergenic 25.0%
! AAAAAACAGAGAATTGATGA+AGG - chr7_3:66337682-66337701 Msa1117880:intron 25.0%
!! AAGAATTAGTTTCTGTTTGT+AGG - chr7_3:66337863-66337882 Msa1117880:intron 25.0%
!!! ATATATACAAATGGATTGCA+TGG + chr7_3:66337953-66337972 None:intergenic 25.0%
!!! AGTGAAACTTGTTAATATCT+TGG + chr7_3:66338229-66338248 None:intergenic 25.0%
!! AAAATGAGCGTTGAAATGAA+CGG + chr7_3:66332409-66332428 None:intergenic 30.0%
!! AATAGGGATTTGATTTTCTC+GGG + chr7_3:66332530-66332549 None:intergenic 30.0%
! AAATTGAAGCATTCAGAATC+TGG + chr7_3:66332595-66332614 None:intergenic 30.0%
AAGTCAAATGGAAAGTTTCT+AGG + chr7_3:66332663-66332682 None:intergenic 30.0%
TAGAAACTTTCCATTTGACT+TGG - chr7_3:66332662-66332681 Msa1117880:CDS 30.0%
!! ATTGTTGTGTTTTTGTGTTG+TGG - chr7_3:66332769-66332788 Msa1117880:CDS 30.0%
ATGATGCTACATAAATCTCA+AGG - chr7_3:66332843-66332862 Msa1117880:intron 30.0%
!!! GTGTTTAGGTTTTAGAAGTT+AGG - chr7_3:66333096-66333115 Msa1117880:intron 30.0%
!!! TTTAGGTTTTAGAAGTTAGG+AGG - chr7_3:66333099-66333118 Msa1117880:intron 30.0%
AAGCTACAAAGTTTAACTGT+TGG - chr7_3:66333218-66333237 Msa1117880:intron 30.0%
TAGTATCATTGTAGGTATGT+CGG + chr7_3:66333269-66333288 None:intergenic 30.0%
CCTATGTTTAGTATCATTGT+AGG + chr7_3:66333277-66333296 None:intergenic 30.0%
CCTACAATGATACTAAACAT+AGG - chr7_3:66333274-66333293 Msa1117880:intron 30.0%
ATAGGCTAAACCTTCTAAAT+TGG - chr7_3:66333292-66333311 Msa1117880:intron 30.0%
TAGGCTAAACCTTCTAAATT+GGG - chr7_3:66333293-66333312 Msa1117880:intron 30.0%
! AAAAAGGGTTTAGACTTGTT+TGG + chr7_3:66333432-66333451 None:intergenic 30.0%
TTGCTAGAACATGCTAAAAA+GGG + chr7_3:66333447-66333466 None:intergenic 30.0%
ATTGCTAGAACATGCTAAAA+AGG + chr7_3:66333448-66333467 None:intergenic 30.0%
AAATAAGTAATGCATGCGTA+AGG - chr7_3:66333521-66333540 Msa1117880:intron 30.0%
AATAAGTAATGCATGCGTAA+GGG - chr7_3:66333522-66333541 Msa1117880:intron 30.0%
!! ATTTTGTTACTTGCATTCCA+AGG - chr7_3:66333640-66333659 Msa1117880:intron 30.0%
ACCAATTGACAATACAATGT+TGG - chr7_3:66333675-66333694 Msa1117880:intron 30.0%
TCCAACATTGTATTGTCAAT+TGG + chr7_3:66333679-66333698 None:intergenic 30.0%
AATACAATGTTGGAGTGTAT+GGG - chr7_3:66333685-66333704 Msa1117880:intron 30.0%
GGAATCAAAAAGAAATTGCA+AGG + chr7_3:66333881-66333900 None:intergenic 30.0%
ATTCTAACAAGGACTAAAAC+TGG + chr7_3:66333926-66333945 None:intergenic 30.0%
!! GTGGCTTTATTAATGAAATG+TGG - chr7_3:66333981-66334000 Msa1117880:intron 30.0%
AAACGGTAAAGAATCAGTTT+AGG - chr7_3:66334286-66334305 Msa1117880:intron 30.0%
AACGGTAAAGAATCAGTTTA+GGG - chr7_3:66334287-66334306 Msa1117880:intron 30.0%
! TCTTTGCTCTTATTTAGAGA+TGG - chr7_3:66334557-66334576 Msa1117880:intron 30.0%
ATGTTATGGAAGAAACTTGT+AGG - chr7_3:66334604-66334623 Msa1117880:intron 30.0%
GCAACATCAACATTTCTATA+AGG - chr7_3:66334828-66334847 Msa1117880:intron 30.0%
TGGAAGAAGCTTAAATGTTA+GGG - chr7_3:66334881-66334900 Msa1117880:intron 30.0%
GAACCAAAAAGAAAATCTAG+AGG - chr7_3:66334911-66334930 Msa1117880:intron 30.0%
! AAGCCTCTAGATTTTCTTTT+TGG + chr7_3:66334917-66334936 None:intergenic 30.0%
AATCTTCAGAGTCATTATGA+AGG + chr7_3:66335012-66335031 None:intergenic 30.0%
! AACCATTTTGGACAACTTAT+GGG + chr7_3:66335906-66335925 None:intergenic 30.0%
!! ATTCCTTAACTACTTTTCTC+TGG - chr7_3:66335968-66335987 Msa1117880:intron 30.0%
!! TTCCTTAACTACTTTTCTCT+GGG - chr7_3:66335969-66335988 Msa1117880:intron 30.0%
TAAAAAAAGGTTCTGCTAAC+TGG + chr7_3:66335997-66336016 None:intergenic 30.0%
GATGTATAATCATTGTTGGA+AGG - chr7_3:66336041-66336060 Msa1117880:intron 30.0%
TGTATAATCATTGTTGGAAG+GGG - chr7_3:66336043-66336062 Msa1117880:intron 30.0%
GGTAAAAGCAAAAACAGAAA+AGG + chr7_3:66336084-66336103 None:intergenic 30.0%
TTAGCTAAACTATTGTCATC+TGG + chr7_3:66336105-66336124 None:intergenic 30.0%
TCATGTTAAAAGCCATTTAC+AGG - chr7_3:66336218-66336237 Msa1117880:intron 30.0%
CACATATTGATACCTGTAAA+TGG + chr7_3:66336233-66336252 None:intergenic 30.0%
CATTTACAGGTATCAATATG+TGG - chr7_3:66336231-66336250 Msa1117880:intron 30.0%
! CAGATTCTAAAGATGAGAAA+AGG - chr7_3:66336494-66336513 Msa1117880:intron 30.0%
AAAGATGAGAAAAGGAATTC+TGG - chr7_3:66336502-66336521 Msa1117880:intron 30.0%
TAACTGATTAAGCATCCATA+TGG - chr7_3:66337011-66337030 Msa1117880:intron 30.0%
AAGAGCGATCATTACATTAA+TGG - chr7_3:66337100-66337119 Msa1117880:intron 30.0%
! AATTAGCTTCTAATTTGCCT+CGG - chr7_3:66337345-66337364 Msa1117880:CDS 30.0%
ATATCAAGGAAGTAAATGCA+CGG + chr7_3:66337465-66337484 None:intergenic 30.0%
ATTTACTTCCTTGATATTCC+AGG - chr7_3:66337468-66337487 Msa1117880:CDS 30.0%
!! TTTGTAATTGCTTTTGAACC+TGG + chr7_3:66337489-66337508 None:intergenic 30.0%
TCAACTTGTGGTATATAACT+TGG - chr7_3:66338190-66338209 Msa1117880:intron 30.0%
GTAATGAGATTGAGGATTAG+TGG + chr7_3:66332502-66332521 None:intergenic 35.0%
AGAGAGAGAGAGAGAAAATA+GGG + chr7_3:66332546-66332565 None:intergenic 35.0%
!! AATCTGGTTTCGAATTTTGC+GGG + chr7_3:66332579-66332598 None:intergenic 35.0%
!! GAATCTGGTTTCGAATTTTG+CGG + chr7_3:66332580-66332599 None:intergenic 35.0%
! TTCAATTTTAAGCTTCTCGC+TGG - chr7_3:66332607-66332626 Msa1117880:CDS 35.0%
GTATCATGCAAAGAAGTTTC+CGG - chr7_3:66332812-66332831 Msa1117880:CDS 35.0%
ATGCTACATAAATCTCAAGG+CGG - chr7_3:66332846-66332865 Msa1117880:intron 35.0%
GAAAAGAAATACCCACTATC+TGG + chr7_3:66333023-66333042 None:intergenic 35.0%
TAACTGTTGGAAAATCACAG+TGG - chr7_3:66333231-66333250 Msa1117880:intron 35.0%
AACTGTTGGAAAATCACAGT+GGG - chr7_3:66333232-66333251 Msa1117880:intron 35.0%
CAATACAATGTTGGAGTGTA+TGG - chr7_3:66333684-66333703 Msa1117880:intron 35.0%
! GGATTGAGTTCAATTTTGTG+TGG - chr7_3:66333752-66333771 Msa1117880:intron 35.0%
! GAATGTTACCATTTGGTCTT+GGG - chr7_3:66334234-66334253 Msa1117880:intron 35.0%
! ACTGATTCTTTACCGTTTGA+GGG + chr7_3:66334284-66334303 None:intergenic 35.0%
! AACTGATTCTTTACCGTTTG+AGG + chr7_3:66334285-66334304 None:intergenic 35.0%
GTACCTATTCCAGAATTTCT+CGG - chr7_3:66334375-66334394 Msa1117880:intron 35.0%
TACCTATTCCAGAATTTCTC+GGG - chr7_3:66334376-66334395 Msa1117880:intron 35.0%
CAGGGTAACTAAGAATGTTA+TGG - chr7_3:66334590-66334609 Msa1117880:intron 35.0%
TCAGTTTATGAAAGGGAGAA+AGG - chr7_3:66334672-66334691 Msa1117880:intron 35.0%
CAGTTTATGAAAGGGAGAAA+GGG - chr7_3:66334673-66334692 Msa1117880:intron 35.0%
!!! AGAAAGGGCTTTGTTTTAGT+TGG - chr7_3:66334688-66334707 Msa1117880:intron 35.0%
TATAAGGTCCGATTTCAACA+AGG - chr7_3:66334844-66334863 Msa1117880:intron 35.0%
GTGGAAGAAGCTTAAATGTT+AGG - chr7_3:66334880-66334899 Msa1117880:intron 35.0%
! TGATATCTGCACAACCATTT+TGG - chr7_3:66335042-66335061 Msa1117880:intron 35.0%
! GATATCTGCACAACCATTTT+GGG - chr7_3:66335043-66335062 Msa1117880:intron 35.0%
GAAAAAAGGTTGTCCCAAAA+TGG + chr7_3:66335059-66335078 None:intergenic 35.0%
CTCAAAAGATGAGGGAAAAA+AGG + chr7_3:66335073-66335092 None:intergenic 35.0%
! CAACCATTTTGGACAACTTA+TGG + chr7_3:66335907-66335926 None:intergenic 35.0%
ATCACTCTCAAAACACCTTT+CGG + chr7_3:66336174-66336193 None:intergenic 35.0%
!!! AAAGGTGTTTTGAGAGTGAT+GGG - chr7_3:66336174-66336193 Msa1117880:intron 35.0%
!!! CAGTTGACTCAGTTCTTTTT+TGG - chr7_3:66336466-66336485 Msa1117880:intron 35.0%
AAAACAACTAAGACACCCAT+GGG + chr7_3:66336555-66336574 None:intergenic 35.0%
AATCACTCAAATCAGCCATA+TGG + chr7_3:66337029-66337048 None:intergenic 35.0%
! CTTTTGAACCTGGAATATCA+AGG + chr7_3:66337479-66337498 None:intergenic 35.0%
ATACTTGCAGAAGATCATAG+AGG - chr7_3:66337531-66337550 Msa1117880:intron 35.0%
GAGAATTGATGAAGGTTCAA+AGG - chr7_3:66337690-66337709 Msa1117880:intron 35.0%
ATTGATGAAGGTTCAAAGGA+TGG - chr7_3:66337694-66337713 Msa1117880:intron 35.0%
AGCAGTCTTTCTTGTAACTT+GGG + chr7_3:66337731-66337750 None:intergenic 35.0%
CAGAAGAATGATTGTGATGT+TGG - chr7_3:66337751-66337770 Msa1117880:five_prime_UTR 35.0%
TCATACAAGTTTGGATCCAA+AGG + chr7_3:66337778-66337797 None:intergenic 35.0%
TTGGAAACAGAAAATGACGA+CGG - chr7_3:66337823-66337842 Msa1117880:five_prime_UTR 35.0%
ATTGACATGCATTGTACATG+TGG - chr7_3:66338049-66338068 Msa1117880:intron 35.0%
TGACAAGCTTGATATTGACA+TGG + chr7_3:66338140-66338159 None:intergenic 35.0%
TCAAGCTTGTCAATTAGTGA+CGG - chr7_3:66338148-66338167 Msa1117880:intron 35.0%
TGATCTTTGTAGTCAACTTG+TGG - chr7_3:66338178-66338197 Msa1117880:intron 35.0%
!! ACGTGTCGTTCGTACTTTTT+GGG + chr7_3:66332326-66332345 None:intergenic 40.0%
!! TTGGAAGGTGTCGTTAACAA+TGG + chr7_3:66332371-66332390 None:intergenic 40.0%
! GGGAAAGTGTAATGAGATTG+AGG + chr7_3:66332510-66332529 None:intergenic 40.0%
GAGAGAGAGAGAGAGAAAAT+AGG + chr7_3:66332547-66332566 None:intergenic 40.0%
GTGAACAGTTTGCAAATGGT+GGG - chr7_3:66332877-66332896 Msa1117880:intron 40.0%
TGAACAGTTTGCAAATGGTG+GGG - chr7_3:66332878-66332897 Msa1117880:intron 40.0%
GTGAAAAATGTTCAACCTGC+TGG - chr7_3:66332918-66332937 Msa1117880:intron 40.0%
AAAAATGTTCAACCTGCTGG+AGG - chr7_3:66332921-66332940 Msa1117880:intron 40.0%
!! GCGTAATAGCATCGACAAAA+CGG + chr7_3:66332989-66333008 None:intergenic 40.0%
TTTAGAAGTTAGGAGGAGTG+TGG - chr7_3:66333106-66333125 Msa1117880:intron 40.0%
TTGTAGGTATGTCGGAATCA+CGG + chr7_3:66333261-66333280 None:intergenic 40.0%
CTAGGTTCTCCCAATTTAGA+AGG + chr7_3:66333305-66333324 None:intergenic 40.0%
CTTGAAGTCTAAACCCTTTC+TGG - chr7_3:66333376-66333395 Msa1117880:intron 40.0%
! AGGGTTTAGGATACCAGAAA+GGG + chr7_3:66333392-66333411 None:intergenic 40.0%
! AGGGTTTAGACTTGTTTGGA+AGG + chr7_3:66333428-66333447 None:intergenic 40.0%
CTGCAAGACTGTAACTACAT+GGG - chr7_3:66333608-66333627 Msa1117880:intron 40.0%
TGGAAGGTCAGATTCTAACA+AGG + chr7_3:66333937-66333956 None:intergenic 40.0%
! ACCTTCCAGAAATGCTGATT+TGG - chr7_3:66333949-66333968 Msa1117880:CDS 40.0%
GCTGCTGCGAATACAATTTA+GGG + chr7_3:66334100-66334119 None:intergenic 40.0%
AGCTGCTGCGAATACAATTT+AGG + chr7_3:66334101-66334120 None:intergenic 40.0%
CCTAGATTGAATCTCGTGAT+GGG - chr7_3:66334151-66334170 Msa1117880:intron 40.0%
GGAATGTTACCATTTGGTCT+TGG - chr7_3:66334233-66334252 Msa1117880:intron 40.0%
TTAGGGTACAAGAATTGACG+AGG - chr7_3:66334304-66334323 Msa1117880:intron 40.0%
TAGGGTACAAGAATTGACGA+GGG - chr7_3:66334305-66334324 Msa1117880:intron 40.0%
!! CAACAGAAATTGGTCTTGTG+TGG + chr7_3:66334335-66334354 None:intergenic 40.0%
!! AAGAAGAGTGCTAAGCTTGT+TGG - chr7_3:66334630-66334649 Msa1117880:intron 40.0%
!! AGAAGAGTGCTAAGCTTGTT+GGG - chr7_3:66334631-66334650 Msa1117880:intron 40.0%
TCCGATTTCAACAAGGACAA+GGG - chr7_3:66334851-66334870 Msa1117880:intron 40.0%
AGAAGCTTAAATGTTAGGGC+TGG - chr7_3:66334885-66334904 Msa1117880:intron 40.0%
GTCCCATAAGTTGTCCAAAA+TGG - chr7_3:66335901-66335920 Msa1117880:intron 40.0%
TGCCCAGAGAAAAGTAGTTA+AGG + chr7_3:66335974-66335993 None:intergenic 40.0%
!!! GAAAGGTGTTTTGAGAGTGA+TGG - chr7_3:66336173-66336192 Msa1117880:intron 40.0%
ACATGATAAATGGTCAGTCC+AGG + chr7_3:66336204-66336223 None:intergenic 40.0%
ACGAAGCGCAAGAAAAAACA+AGG + chr7_3:66336396-66336415 None:intergenic 40.0%
! AATTCTGGAGACAGCATTTC+TGG - chr7_3:66336517-66336536 Msa1117880:intron 40.0%
AAACAACTAAGACACCCATG+GGG + chr7_3:66336554-66336573 None:intergenic 40.0%
GAAAACAACTAAGACACCCA+TGG + chr7_3:66336556-66336575 None:intergenic 40.0%
!! AGATAAGTGATGGATTACCC+AGG + chr7_3:66337293-66337312 None:intergenic 40.0%
CTTCTATGAGTGAGCATTTC+TGG - chr7_3:66337428-66337447 Msa1117880:CDS 40.0%
!! TGAGTGAGCATTTCTGGTAA+TGG - chr7_3:66337434-66337453 Msa1117880:CDS 40.0%
ACAAATGAGAATTGAAGCCC+AGG - chr7_3:66337504-66337523 Msa1117880:exon 40.0%
CAAATGAGAATTGAAGCCCA+GGG - chr7_3:66337505-66337524 Msa1117880:exon 40.0%
CTTCTGCAAGTATTTACCCT+GGG + chr7_3:66337524-66337543 None:intergenic 40.0%
TCTTCTGCAAGTATTTACCC+TGG + chr7_3:66337525-66337544 None:intergenic 40.0%
ATAGAGGAACAGCAGAAACT+AGG - chr7_3:66337547-66337566 Msa1117880:intron 40.0%
! TTTTGCTTATCATGGGACAG+CGG + chr7_3:66337601-66337620 None:intergenic 40.0%
GAGCAGTCTTTCTTGTAACT+TGG + chr7_3:66337732-66337751 None:intergenic 40.0%
TGATTGTGATGTTGGTCCTT+TGG - chr7_3:66337759-66337778 Msa1117880:five_prime_UTR 40.0%
GCATCGTCTTCATACAAGTT+TGG + chr7_3:66337787-66337806 None:intergenic 40.0%
AACTTGTATGAAGACGATGC+TGG - chr7_3:66337787-66337806 Msa1117880:five_prime_UTR 40.0%
! TGCTGGCTATGGATTTGATT+TGG - chr7_3:66337804-66337823 Msa1117880:five_prime_UTR 40.0%
! ATTTCTGTTGACTGAGAGTG+CGG + chr7_3:66338027-66338046 None:intergenic 40.0%
TCTTTCGAGCCTTGAGAATG+AGG - chr7_3:66332250-66332269 Msa1117880:three_prime_UTR 45.0%
CTTTCGAGCCTTGAGAATGA+GGG - chr7_3:66332251-66332270 Msa1117880:three_prime_UTR 45.0%
TTACCTCTCCCTCATTCTCA+AGG + chr7_3:66332262-66332281 None:intergenic 45.0%
GAGAATGAGGGAGAGGTAAA+CGG - chr7_3:66332263-66332282 Msa1117880:three_prime_UTR 45.0%
!! CACGTGTCGTTCGTACTTTT+TGG + chr7_3:66332327-66332346 None:intergenic 45.0%
! GTGTCGTTAACAATGGTGGA+GGG + chr7_3:66332364-66332383 None:intergenic 45.0%
!! GAAGGTGTCGTTAACAATGG+TGG + chr7_3:66332368-66332387 None:intergenic 45.0%
!! TGAGCGTTGAAATGAACGGA+CGG + chr7_3:66332405-66332424 None:intergenic 45.0%
TCATGCAAAGAAGTTTCCGG+AGG - chr7_3:66332815-66332834 Msa1117880:CDS 45.0%
CTACATAAATCTCAAGGCGG+TGG - chr7_3:66332849-66332868 Msa1117880:intron 45.0%
GGTGGTGAACAGTTTGCAAA+TGG - chr7_3:66332873-66332892 Msa1117880:intron 45.0%
GGTGAACAGTTTGCAAATGG+TGG - chr7_3:66332876-66332895 Msa1117880:intron 45.0%
GAACAGTTTGCAAATGGTGG+GGG - chr7_3:66332879-66332898 Msa1117880:intron 45.0%
!!! CCTGTGCTGTGCTTTTTTCT+AGG + chr7_3:66333323-66333342 None:intergenic 45.0%
! CCTAGAAAAAAGCACAGCAC+AGG - chr7_3:66333320-66333339 Msa1117880:intron 45.0%
! AGAAAAAAGCACAGCACAGG+AGG - chr7_3:66333323-66333342 Msa1117880:intron 45.0%
! GAGGGTTTAGGATACCAGAA+AGG + chr7_3:66333393-66333412 None:intergenic 45.0%
! TAGACTTGTTTGGAAGGCGT+GGG + chr7_3:66333422-66333441 None:intergenic 45.0%
! TTAGACTTGTTTGGAAGGCG+TGG + chr7_3:66333423-66333442 None:intergenic 45.0%
CCATGTAGTTACAGTCTTGC+AGG + chr7_3:66333610-66333629 None:intergenic 45.0%
CCTGCAAGACTGTAACTACA+TGG - chr7_3:66333607-66333626 Msa1117880:intron 45.0%
TTGGTGCACAACTCAAACCT+TGG + chr7_3:66333660-66333679 None:intergenic 45.0%
! GCCAAATCAGCATTTCTGGA+AGG + chr7_3:66333953-66333972 None:intergenic 45.0%
GCATGCCAAATCAGCATTTC+TGG + chr7_3:66333957-66333976 None:intergenic 45.0%
GCCTAGATTGAATCTCGTGA+TGG - chr7_3:66334150-66334169 Msa1117880:intron 45.0%
CCCATCACGAGATTCAATCT+AGG + chr7_3:66334154-66334173 None:intergenic 45.0%
!! ATTGAATCTCGTGATGGGTC+AGG - chr7_3:66334156-66334175 Msa1117880:intron 45.0%
GAGGGAGGAATGTTACCATT+TGG - chr7_3:66334227-66334246 Msa1117880:intron 45.0%
TTCTTTACCGTTTGAGGGAC+CGG + chr7_3:66334279-66334298 None:intergenic 45.0%
AGGGTACAAGAATTGACGAG+GGG - chr7_3:66334306-66334325 Msa1117880:intron 45.0%
AGTGAGGACGCAACAGAAAT+TGG + chr7_3:66334345-66334364 None:intergenic 45.0%
AGGTACATAACTCGACAGTG+AGG + chr7_3:66334361-66334380 None:intergenic 45.0%
!! CTCCCGAGAAATTCTGGAAT+AGG + chr7_3:66334381-66334400 None:intergenic 45.0%
CTATTCCAGAATTTCTCGGG+AGG - chr7_3:66334379-66334398 Msa1117880:intron 45.0%
GATTGCGTGATACACGAAGA+AGG - chr7_3:66334498-66334517 Msa1117880:intron 45.0%
!!! GAAGGTTTTGTTTGCTCGCA+TGG - chr7_3:66334516-66334535 Msa1117880:intron 45.0%
CAAAGAAGCCCATCATCATC+GGG + chr7_3:66334543-66334562 None:intergenic 45.0%
GCAAAGAAGCCCATCATCAT+CGG + chr7_3:66334544-66334563 None:intergenic 45.0%
TAGAGATGGTCATTGAGTGC+AGG - chr7_3:66334571-66334590 Msa1117880:intron 45.0%
AGAGATGGTCATTGAGTGCA+GGG - chr7_3:66334572-66334591 Msa1117880:intron 45.0%
GTCCGATTTCAACAAGGACA+AGG - chr7_3:66334850-66334869 Msa1117880:intron 45.0%
GCCCTTGTCCTTGTTGAAAT+CGG + chr7_3:66334855-66334874 None:intergenic 45.0%
ACAAGGACAAGGGCTAAAAG+TGG - chr7_3:66334861-66334880 Msa1117880:intron 45.0%
!! CTACATGTAGAAGTATCGCC+TGG - chr7_3:66336331-66336350 Msa1117880:intron 45.0%
AAGTACTTGCCTGAATCACC+AGG - chr7_3:66336356-66336375 Msa1117880:intron 45.0%
TTACCATCACCTGGTGATTC+AGG + chr7_3:66336368-66336387 None:intergenic 45.0%
! GAATCACCAGGTGATGGTAA+AGG - chr7_3:66336368-66336387 Msa1117880:intron 45.0%
ATAAAACAATCGTGCCCTGC+AGG - chr7_3:66336628-66336647 Msa1117880:intron 45.0%
TAAAACAATCGTGCCCTGCA+GGG - chr7_3:66336629-66336648 Msa1117880:intron 45.0%
!! TTGATTTGCAATCCCCTGCA+GGG + chr7_3:66336645-66336664 None:intergenic 45.0%
!! ATTGATTTGCAATCCCCTGC+AGG + chr7_3:66336646-66336665 None:intergenic 45.0%
AGTCATGCATCTTGTGTCCT+GGG - chr7_3:66337273-66337292 Msa1117880:intron 45.0%
! TTCTAATTTGCCTCGGACTC+AGG - chr7_3:66337352-66337371 Msa1117880:CDS 45.0%
ACACTTAAATCCTGAGTCCG+AGG + chr7_3:66337365-66337384 None:intergenic 45.0%
GCAGAAACTAGGTAGTACCT+TGG - chr7_3:66337558-66337577 Msa1117880:intron 45.0%
!!! GGGCTGGTTTTGCTTATCAT+GGG + chr7_3:66337608-66337627 None:intergenic 45.0%
! TATGAAGACGATGCTGGCTA+TGG - chr7_3:66337793-66337812 Msa1117880:five_prime_UTR 45.0%
! TTTCTGTTGACTGAGAGTGC+GGG + chr7_3:66338026-66338045 None:intergenic 45.0%
TACATGTGGCGATGAATGCT+GGG - chr7_3:66338063-66338082 Msa1117880:intron 45.0%
!! GGTGTCGTTAACAATGGTGG+AGG + chr7_3:66332365-66332384 None:intergenic 50.0%
!!! ACGGCGGCGTTTTAATTGGA+AGG + chr7_3:66332386-66332405 None:intergenic 50.0%
TGTAGCATCATCGTCTCCTC+CGG + chr7_3:66332834-66332853 None:intergenic 50.0%
CATAAATCTCAAGGCGGTGG+TGG - chr7_3:66332852-66332871 Msa1117880:intron 50.0%
! GCAAATGGTGGGGGTTTGAA+TGG - chr7_3:66332888-66332907 Msa1117880:intron 50.0%
AATGTTCAACCTGCTGGAGG+TGG - chr7_3:66332924-66332943 Msa1117880:intron 50.0%
GTCGATGCTATTACGCAGCT+TGG - chr7_3:66332993-66333012 Msa1117880:intron 50.0%
GATGCTATTACGCAGCTTGG+TGG - chr7_3:66332996-66333015 Msa1117880:intron 50.0%
! AGCTTGGTGGACCAGATAGT+GGG - chr7_3:66333009-66333028 Msa1117880:intron 50.0%
! AGAAGTTAGGAGGAGTGTGG+AGG - chr7_3:66333109-66333128 Msa1117880:intron 50.0%
! GAAGTTAGGAGGAGTGTGGA+GGG - chr7_3:66333110-66333129 Msa1117880:intron 50.0%
! TGTGGAGGGAAAGGGCTTTT+TGG - chr7_3:66333124-66333143 Msa1117880:intron 50.0%
! GAGGGAAAGGGCTTTTTGGA+TGG - chr7_3:66333128-66333147 Msa1117880:intron 50.0%
! AAAAAGCACAGCACAGGAGG+AGG - chr7_3:66333326-66333345 Msa1117880:intron 50.0%
AGGAGGAGGATGACTTTGGA+GGG - chr7_3:66333340-66333359 Msa1117880:intron 50.0%
! AGACTTGTTTGGAAGGCGTG+GGG + chr7_3:66333421-66333440 None:intergenic 50.0%
!! GCTGATTTGGCATGCTGATG+TGG - chr7_3:66333962-66333981 Msa1117880:CDS 50.0%
GGGTACAAGAATTGACGAGG+GGG - chr7_3:66334307-66334326 Msa1117880:intron 50.0%
GTTCTCCTCCCGAGAAATTC+TGG + chr7_3:66334387-66334406 None:intergenic 50.0%
! GCTTAAATGTTAGGGCTGGC+TGG - chr7_3:66334889-66334908 Msa1117880:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr7_3:66335118-66335137 Msa1117880:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr7_3:66335118-66335137 Msa1117880:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr7_3:66335118-66335137 Msa1117880:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr7_3:66335118-66335137 Msa1117880:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr7_3:66335118-66335137 Msa1117880:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr7_3:66335118-66335137 Msa1117880:intron 50.0%
GAGAGAGAAGAGAGAGAGAG+AGG - chr7_3:66335466-66335485 Msa1117880:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr7_3:66335118-66335137 Msa1117880:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr7_3:66335118-66335137 Msa1117880:intron 50.0%
ATGACAGGAGCAACACCGAA+AGG - chr7_3:66336156-66336175 Msa1117880:intron 50.0%
ATTCAGGCAAGTACTTCGCC+AGG + chr7_3:66336352-66336371 None:intergenic 50.0%
TTGCCTGAATCACCAGGTGA+TGG - chr7_3:66336362-66336381 Msa1117880:intron 50.0%
! AAGGCACCTTTACCATCACC+TGG + chr7_3:66336377-66336396 None:intergenic 50.0%
!! AGGTAGAGGCGTCAAAGTGA+AGG + chr7_3:66336597-66336616 None:intergenic 50.0%
AAAACAATCGTGCCCTGCAG+GGG - chr7_3:66336630-66336649 Msa1117880:intron 50.0%
TGACGCACTACGAATGCAGA+TGG - chr7_3:66336665-66336684 Msa1117880:intron 50.0%
ACGTCTGCATGAACAGCTTG+AGG - chr7_3:66336698-66336717 Msa1117880:intron 50.0%
GAGTCATGCATCTTGTGTCC+TGG - chr7_3:66337272-66337291 Msa1117880:intron 50.0%
AGGTAGTACCTTGGCAGCAT+CGG - chr7_3:66337567-66337586 Msa1117880:intron 50.0%
AAGTGTTTCCGATGCTGCCA+AGG + chr7_3:66337578-66337597 None:intergenic 50.0%
!!! GGGGCTGGTTTTGCTTATCA+TGG + chr7_3:66337609-66337628 None:intergenic 50.0%
! AGACCCAGAAGGCTCTGATA+GGG + chr7_3:66337629-66337648 None:intergenic 50.0%
! TAGACCCAGAAGGCTCTGAT+AGG + chr7_3:66337630-66337649 None:intergenic 50.0%
!! GGGAGAAAAAGTGCCTGCAA+GGG + chr7_3:66337659-66337678 None:intergenic 50.0%
GTGTTTACCACTCTCACGAC+AGG + chr7_3:66338004-66338023 None:intergenic 50.0%
GTACATGTGGCGATGAATGC+TGG - chr7_3:66338062-66338081 Msa1117880:intron 50.0%
GAGCCTTGAGAATGAGGGAG+AGG - chr7_3:66332256-66332275 Msa1117880:three_prime_UTR 55.0%
AACGACACGTGACAAACGCG+TGG - chr7_3:66332336-66332355 Msa1117880:three_prime_UTR 55.0%
ACGACACGTGACAAACGCGT+GGG - chr7_3:66332337-66332356 Msa1117880:three_prime_UTR 55.0%
!! ACGGACGGCGGCGTTTTAAT+TGG + chr7_3:66332390-66332409 None:intergenic 55.0%
GCGTTGAAATGAACGGACGG+CGG + chr7_3:66332402-66332421 None:intergenic 55.0%
! AAATCTCAAGGCGGTGGTGG+TGG - chr7_3:66332855-66332874 Msa1117880:intron 55.0%
TTCAACCTGCTGGAGGTGGT+GGG - chr7_3:66332928-66332947 Msa1117880:intron 55.0%
! CAGCTTGGTGGACCAGATAG+TGG - chr7_3:66333008-66333027 Msa1117880:intron 55.0%
! TAGGAGGAGTGTGGAGGGAA+AGG - chr7_3:66333115-66333134 Msa1117880:intron 55.0%
! AGGAGGAGTGTGGAGGGAAA+GGG - chr7_3:66333116-66333135 Msa1117880:intron 55.0%
GCACAGGAGGAGGATGACTT+TGG - chr7_3:66333336-66333355 Msa1117880:intron 55.0%
CAGGAGGAGGATGACTTTGG+AGG - chr7_3:66333339-66333358 Msa1117880:intron 55.0%
! GACTTGTTTGGAAGGCGTGG+GGG + chr7_3:66333420-66333439 None:intergenic 55.0%
CGGTGGATCCCAAGACCAAA+TGG + chr7_3:66334245-66334264 None:intergenic 55.0%
! TGGTCTTGGGATCCACCGAT+CGG - chr7_3:66334247-66334266 Msa1117880:intron 55.0%
AGGAGAACAGTTGCCGTCAG+TGG - chr7_3:66334399-66334418 Msa1117880:intron 55.0%
CCGCTACGAATCACCACTGA+CGG + chr7_3:66334415-66334434 None:intergenic 55.0%
CCGTCAGTGGTGATTCGTAG+CGG - chr7_3:66334412-66334431 Msa1117880:intron 55.0%
TCGCATGGTCCCGATGATGA+TGG - chr7_3:66334531-66334550 Msa1117880:intron 55.0%
CGCATGGTCCCGATGATGAT+GGG - chr7_3:66334532-66334551 Msa1117880:intron 55.0%
GAGAGAGAGGAGAGAGAGAG+AGG - chr7_3:66335173-66335192 Msa1117880:intron 55.0%
GGAGAGAGAGAGAGAGAGAG+AGG - chr7_3:66335116-66335135 Msa1117880:intron 55.0%
GAGAGAGAGGAGAGAGAGAG+AGG - chr7_3:66335173-66335192 Msa1117880:intron 55.0%
!! TTGAGAGTGATGGGTGTGCC+TGG - chr7_3:66336183-66336202 Msa1117880:intron 55.0%
!! TGGCGCTGATTCTTCCCCAT+GGG - chr7_3:66336537-66336556 Msa1117880:intron 55.0%
CGCACTACGAATGCAGATGG+AGG - chr7_3:66336668-66336687 Msa1117880:intron 55.0%
AGCCCCTATCAGAGCCTTCT+GGG - chr7_3:66337623-66337642 Msa1117880:intron 55.0%
! GACCCAGAAGGCTCTGATAG+GGG + chr7_3:66337628-66337647 None:intergenic 55.0%
! AGGGCATCACTAGACCCAGA+AGG + chr7_3:66337640-66337659 None:intergenic 55.0%
!! GGGGAGAAAAAGTGCCTGCA+AGG + chr7_3:66337660-66337679 None:intergenic 55.0%
CTTCTCTCCTGTCGTGAGAG+TGG - chr7_3:66337994-66338013 Msa1117880:intron 55.0%
GTTCAACCTGCTGGAGGTGG+TGG - chr7_3:66332927-66332946 Msa1117880:intron 60.0%
GTGGGAAGCAGCGTTTGCGT+TGG - chr7_3:66332946-66332965 Msa1117880:intron 60.0%
GCAGCGTTTGCGTTGGACGT+CGG - chr7_3:66332953-66332972 Msa1117880:intron 60.0%
! GTTTGGAAGGCGTGGGGGAA+GGG + chr7_3:66333415-66333434 None:intergenic 60.0%
! TGTTTGGAAGGCGTGGGGGA+AGG + chr7_3:66333416-66333435 None:intergenic 60.0%
AGTCCCGATACGTGACGACG+AGG - chr7_3:66334208-66334227 Msa1117880:intron 60.0%
GTCCCGATACGTGACGACGA+GGG - chr7_3:66334209-66334228 Msa1117880:intron 60.0%
CTCCCTCGTCGTCACGTATC+GGG + chr7_3:66334214-66334233 None:intergenic 60.0%
CCTCCCTCGTCGTCACGTAT+CGG + chr7_3:66334215-66334234 None:intergenic 60.0%
TTGGGATCCACCGATCGGCT+TGG - chr7_3:66334252-66334271 Msa1117880:intron 60.0%
!! ATCCACCGATCGGCTTGGTC+CGG - chr7_3:66334257-66334276 Msa1117880:intron 60.0%
GCTTGGTCCGGTCCCTCAAA+CGG - chr7_3:66334269-66334288 Msa1117880:intron 60.0%
!! CTGGCGCTGATTCTTCCCCA+TGG - chr7_3:66336536-66336555 Msa1117880:intron 60.0%
! CAGAAGGCTCTGATAGGGGC+TGG + chr7_3:66337624-66337643 None:intergenic 60.0%
CAGCCCCTATCAGAGCCTTC+TGG - chr7_3:66337622-66337641 Msa1117880:intron 60.0%
GGGTCTAGTGATGCCCTTGC+AGG - chr7_3:66337643-66337662 Msa1117880:intron 60.0%
TGCTTCCCACCACCTCCAGC+AGG + chr7_3:66332936-66332955 None:intergenic 65.0%
CGTGGGGGAAGGGAGGGTTT+AGG + chr7_3:66333405-66333424 None:intergenic 65.0%
CCGATACGTGACGACGAGGG+AGG - chr7_3:66334212-66334231 Msa1117880:intron 65.0%
AGGGACCGGACCAAGCCGAT+CGG + chr7_3:66334265-66334284 None:intergenic 65.0%
! GGAAGGCGTGGGGGAAGGGA+GGG + chr7_3:66333411-66333430 None:intergenic 70.0%
! TGGAAGGCGTGGGGGAAGGG+AGG + chr7_3:66333412-66333431 None:intergenic 70.0%
GACCGGACCAAGCCGATCGG+TGG + chr7_3:66334262-66334281 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 66332067 66338263 66332067 ID=Msa1117880;Name=Msa1117880
chr7_3 mRNA 66332067 66338263 66332067 ID=Msa1117880-mRNA-1;Parent=Msa1117880;Name=Msa1117880-mRNA-1;_AED=0.12;_eAED=0.12;_QI=242|0.83|1|1|0.5|0.42|7|399|259
chr7_3 exon 66332067 66332840 66332067 ID=Msa1117880-mRNA-1:exon:16067;Parent=Msa1117880-mRNA-1
chr7_3 exon 66333772 66333833 66333772 ID=Msa1117880-mRNA-1:exon:16066;Parent=Msa1117880-mRNA-1
chr7_3 exon 66333941 66333989 66333941 ID=Msa1117880-mRNA-1:exon:16065;Parent=Msa1117880-mRNA-1
chr7_3 exon 66334091 66334167 66334091 ID=Msa1117880-mRNA-1:exon:16064;Parent=Msa1117880-mRNA-1
chr7_3 exon 66337304 66337527 66337304 ID=Msa1117880-mRNA-1:exon:16063;Parent=Msa1117880-mRNA-1
chr7_3 exon 66337702 66337872 66337702 ID=Msa1117880-mRNA-1:exon:16062;Parent=Msa1117880-mRNA-1
chr7_3 exon 66338200 66338263 66338200 ID=Msa1117880-mRNA-1:exon:16061;Parent=Msa1117880-mRNA-1
chr7_3 five_prime_UTR 66338200 66338263 66338200 ID=Msa1117880-mRNA-1:five_prime_utr;Parent=Msa1117880-mRNA-1
chr7_3 five_prime_UTR 66337702 66337872 66337702 ID=Msa1117880-mRNA-1:five_prime_utr;Parent=Msa1117880-mRNA-1
chr7_3 five_prime_UTR 66337521 66337527 66337521 ID=Msa1117880-mRNA-1:five_prime_utr;Parent=Msa1117880-mRNA-1
chr7_3 CDS 66337304 66337520 66337304 ID=Msa1117880-mRNA-1:cds;Parent=Msa1117880-mRNA-1
chr7_3 CDS 66334091 66334167 66334091 ID=Msa1117880-mRNA-1:cds;Parent=Msa1117880-mRNA-1
chr7_3 CDS 66333941 66333989 66333941 ID=Msa1117880-mRNA-1:cds;Parent=Msa1117880-mRNA-1
chr7_3 CDS 66333772 66333833 66333772 ID=Msa1117880-mRNA-1:cds;Parent=Msa1117880-mRNA-1
chr7_3 CDS 66332466 66332840 66332466 ID=Msa1117880-mRNA-1:cds;Parent=Msa1117880-mRNA-1
chr7_3 three_prime_UTR 66332067 66332465 66332067 ID=Msa1117880-mRNA-1:three_prime_utr;Parent=Msa1117880-mRNA-1
Gene Sequence

>Msa1117880

ATGTATCATGCAAAGAAGTTTCCGGAGGAGACGATGATGCTACATAAATCTCAAGGCGGTGGTGGTGGTGAACAGTTTGCAAATGGTGGGGGTTTGAATGGATCTGCTGTGAAAAATGTTCAACCTGCTGGAGGTGGTGGGAAGCAGCGTTTGCGTTGGACGTCGGATCTTCATGACCGTTTTGTCGATGCTATTACGCAGCTTGGTGGACCAGATAGAGCAACACCGAAAGGTGTTTTGAGAGTGATGGGTGTGCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAGTATCGCCTGGCGAAGTACTTGCCTGAATCACCAGGTGATGGTAAAGATTCTAAAGATGAGAAAAGGAATTCTGGAGACAGCATTTCTGGCGCTGATTCTTCCCCATGGGTTCAAAAGCAATTACAAATGAGAATTGAAGCCCAGGGTAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAACTAGGTAGTACCTTGGCAGCATCGGAAACACTTCCGCTGTCCCATGATAAGCAAAACCAGCCCCTATCAGAGCCTTCTGGGTCTAGTGATGCCCTTGCAGGCACTTTTTCTCCCCATAAAAAACAGAGAATTGATGAAGGTTCAAAGGATGGCTTCACTGCATCCCAAGTTACAAGAAAGACTGCTCAGAAGAATGATTGTGATGTTGGTCCTTTGGATCCAAACTTGTATGAAGACGATGCTGGCTATGGATTTGATTTGGAAACAGAAAATGACGACGGCAATGAGAGTGAGCAGTAA
Protein sequence

>Msa1117880

MYHAKKFPEETMMLHKSQGGGGGEQFANGGGLNGSAVKNVQPAGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPGDGKDSKDEKRNSGDSISGADSSPWVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLAASETLPLSHDKQNQPLSEPSGSSDALAGTFSPHKKQRIDEGSKDGFTASQVTRKTAQKNDCDVGPLDPNLYEDDAGYGFDLETENDDGNESEQ*