Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118100 | XP_003624785.1 | 97.799 | 318 | 7 | 0 | 1 | 318 | 1 | 318 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118100 | sp|Q54YW1|ELMOA_DICDI | 32.308 | 195 | 111 | 3 | 118 | 293 | 362 | 554 | 1.94e-26 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118100 | G7L2P5 | 97.799 | 318 | 7 | 0 | 1 | 318 | 1 | 318 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1118100 | Msa1170000 | 0.900775 | 5.226547e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118100 | MtrunA17_Chr7g0254541 | 97.799 | 318 | 7 | 0 | 1 | 318 | 1 | 318 | 0.0 | 647 |
| Msa1118100 | MtrunA17_Chr4g0022101 | 61.215 | 214 | 82 | 1 | 105 | 317 | 19 | 232 | 3.83e-91 | 271 |
| Msa1118100 | MtrunA17_Chr8g0335681 | 55.328 | 244 | 93 | 3 | 81 | 317 | 26 | 260 | 3.85e-89 | 267 |
| Msa1118100 | MtrunA17_Chr7g0250291 | 54.008 | 237 | 108 | 1 | 81 | 317 | 29 | 264 | 4.91e-82 | 249 |
| Msa1118100 | MtrunA17_Chr3g0122601 | 57.277 | 213 | 90 | 1 | 106 | 317 | 48 | 260 | 2.35e-76 | 234 |
| Msa1118100 | MtrunA17_Chr0c29g0494021 | 53.933 | 89 | 41 | 0 | 229 | 317 | 1 | 89 | 1.05e-23 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118100 | AT3G03610.1 | 70.370 | 324 | 86 | 2 | 1 | 317 | 1 | 321 | 1.62e-170 | 476 |
| Msa1118100 | AT3G03610.3 | 70.370 | 324 | 86 | 2 | 1 | 317 | 1 | 321 | 1.62e-170 | 476 |
| Msa1118100 | AT3G03610.2 | 70.370 | 324 | 86 | 2 | 1 | 317 | 1 | 321 | 1.62e-170 | 476 |
| Msa1118100 | AT3G03610.4 | 70.370 | 324 | 86 | 2 | 1 | 317 | 13 | 333 | 2.04e-170 | 476 |
| Msa1118100 | AT1G03620.12 | 56.863 | 255 | 100 | 4 | 70 | 317 | 44 | 295 | 2.20e-94 | 282 |
| Msa1118100 | AT1G03620.3 | 59.149 | 235 | 91 | 2 | 84 | 317 | 1 | 231 | 2.67e-94 | 279 |
| Msa1118100 | AT1G03620.6 | 59.149 | 235 | 91 | 2 | 84 | 317 | 1 | 231 | 2.67e-94 | 279 |
| Msa1118100 | AT1G03620.2 | 59.149 | 235 | 91 | 2 | 84 | 317 | 1 | 231 | 2.67e-94 | 279 |
| Msa1118100 | AT1G03620.8 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1118100 | AT1G03620.10 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1118100 | AT1G03620.9 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1118100 | AT1G03620.1 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1118100 | AT1G03620.7 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1118100 | AT1G03620.4 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1118100 | AT1G03620.5 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1118100 | AT1G03620.11 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1118100 | AT1G03620.13 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1118100 | AT3G60260.3 | 57.083 | 240 | 98 | 2 | 80 | 317 | 6 | 242 | 1.50e-91 | 273 |
| Msa1118100 | AT3G60260.2 | 57.500 | 240 | 95 | 3 | 81 | 317 | 29 | 264 | 1.56e-91 | 273 |
| Msa1118100 | AT3G60260.4 | 57.500 | 240 | 95 | 3 | 81 | 317 | 29 | 264 | 1.56e-91 | 273 |
| Msa1118100 | AT3G60260.1 | 57.500 | 240 | 95 | 3 | 81 | 317 | 29 | 264 | 1.56e-91 | 273 |
| Msa1118100 | AT1G67400.1 | 59.615 | 208 | 84 | 0 | 110 | 317 | 73 | 280 | 7.63e-89 | 267 |
| Msa1118100 | AT2G44770.1 | 55.696 | 237 | 104 | 1 | 81 | 317 | 29 | 264 | 8.27e-88 | 264 |
| Msa1118100 | AT3G43400.1 | 62.590 | 139 | 48 | 1 | 152 | 290 | 73 | 207 | 5.11e-55 | 178 |
Find 82 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAGATTATTCTGATATT+TGG | 0.132675 | 7_3:-66638043 | Msa1118110:intron |
| CTAACAAATGCTTAAATAAA+AGG | 0.136455 | 7_3:-66638081 | Msa1118110:intron |
| GAATACTTTACATACATTTA+AGG | 0.163997 | 7_3:-66637969 | None:intergenic |
| CGTTTCACTCGTTGAAATTC+AGG | 0.193695 | 7_3:+66633043 | Msa1118100:five_prime_UTR |
| TTTGCAGCAAACATTGTTCT+AGG | 0.245670 | 7_3:+66634809 | Msa1118100:intron |
| CAGGAACATTTGGATACTTC+TGG | 0.260450 | 7_3:+66633579 | Msa1118100:CDS |
| ACGAGTGAAACGAATCTCTT+TGG | 0.304602 | 7_3:-66633032 | None:intergenic |
| TGCAAAGCGTGCTACATATA+TGG | 0.313380 | 7_3:+66637686 | Msa1118100:CDS |
| TTCATTGAATGAACCGTTGC+TGG | 0.321817 | 7_3:+66633608 | Msa1118100:CDS |
| ATCAGATTGTTGGAAGGAAA+TGG | 0.322781 | 7_3:+66636269 | Msa1118100:CDS |
| CATGTAAATCACAAGTGAAA+TGG | 0.357229 | 7_3:+66638015 | Msa1118100:three_prime_UTR |
| ATGTAAATCACAAGTGAAAT+GGG | 0.362888 | 7_3:+66638016 | Msa1118100:three_prime_UTR |
| TGGAAAACGGCAGGAACATT+TGG | 0.381041 | 7_3:+66633569 | Msa1118100:CDS |
| ACCATGGTTTGCAGGGGTGG+AGG | 0.391694 | 7_3:+66636762 | Msa1118100:intron |
| CTCCACTTAAATCAGATTGT+TGG | 0.392141 | 7_3:+66636259 | Msa1118100:CDS |
| CGGCTTGAAGTTCCCTTTGA+CGG | 0.402080 | 7_3:+66635670 | Msa1118100:CDS |
| TAACAAATGCTTAAATAAAA+GGG | 0.404789 | 7_3:-66638080 | Msa1118110:intron |
| GCAAACATTGTTCTAGGGTC+TGG | 0.406999 | 7_3:+66634815 | Msa1118100:intron |
| TTCGAACCTCATTGCGCAAT+GGG | 0.413507 | 7_3:+66633824 | Msa1118100:CDS |
| CCATGGTTTGCAGGGGTGGA+GGG | 0.415346 | 7_3:+66636763 | Msa1118100:intron |
| GAAAGAAGGCACAAATTCAT+TGG | 0.422747 | 7_3:+66633790 | Msa1118100:CDS |
| TTGATTCCAGCTACTGCAAA+TGG | 0.423995 | 7_3:-66636979 | None:intergenic |
| ATTTATGTTGGTGCAGATGC+TGG | 0.425464 | 7_3:+66637008 | Msa1118100:CDS |
| ATACTATAATTCTTTACTAT+AGG | 0.425884 | 7_3:-66633497 | None:intergenic |
| TTGCATTGCCTTTCAAATGA+TGG | 0.429352 | 7_3:+66637650 | Msa1118100:CDS |
| ACACACCTAAAATCTGTTGA+TGG | 0.432758 | 7_3:-66636309 | None:intergenic |
| TCAGATTGTTGGAAGGAAAT+GGG | 0.433239 | 7_3:+66636270 | Msa1118100:CDS |
| TTCCAACAATCTGATTTAAG+TGG | 0.437679 | 7_3:-66636261 | None:intergenic |
| GCGCAATGGGCACAGTGGTT+AGG | 0.448913 | 7_3:+66633837 | Msa1118100:CDS |
| GTTGTTCCATCTTCTTCGTC+GGG | 0.460134 | 7_3:+66637573 | Msa1118100:intron |
| ATCTCTATACATACCTGCAC+AGG | 0.463215 | 7_3:-66634920 | None:intergenic |
| AGTTGTTCCATCTTCTTCGT+CGG | 0.478166 | 7_3:+66637572 | Msa1118100:intron |
| GCTGCTTGAGGAGGATGAAA+TGG | 0.495909 | 7_3:+66637611 | Msa1118100:CDS |
| TTCCATCGACATCCCCGTGA+TGG | 0.495966 | 7_3:-66633551 | None:intergenic |
| CAGATGCTGGATCTTCAATC+AGG | 0.501555 | 7_3:+66637021 | Msa1118100:CDS |
| TATGTACACTTGAAGATTTG+TGG | 0.503025 | 7_3:+66633757 | Msa1118100:CDS |
| GAATATCCATTTGCAGTAGC+TGG | 0.503288 | 7_3:+66636973 | Msa1118100:CDS |
| CATATTCCCGACGAAGAAGA+TGG | 0.508986 | 7_3:-66637579 | None:intergenic |
| CTCCAGTATAAAAGATATAC+CGG | 0.509227 | 7_3:+66637869 | Msa1118100:CDS |
| TTGCAGCAAACATTGTTCTA+GGG | 0.514573 | 7_3:+66634810 | Msa1118100:intron |
| AGTGGAGGAAGCTCTCGGTC+AGG | 0.522963 | 7_3:-66636243 | None:intergenic |
| AATCAATATCTCATTTATGT+TGG | 0.524266 | 7_3:+66636996 | Msa1118100:CDS |
| TCCAACACTTAGCCCTGTGC+AGG | 0.527434 | 7_3:+66634907 | Msa1118100:CDS |
| ACGGGGATGTCGATGGAAAA+CGG | 0.534153 | 7_3:+66633556 | Msa1118100:CDS |
| CAACAATCTGATTTAAGTGG+AGG | 0.536607 | 7_3:-66636258 | None:intergenic |
| TGCACAGGGCTAAGTGTTGG+AGG | 0.541071 | 7_3:-66634905 | None:intergenic |
| CTCCATCACGGGGATGTCGA+TGG | 0.541121 | 7_3:+66633549 | Msa1118100:CDS |
| TTTCGAACCTCATTGCGCAA+TGG | 0.542371 | 7_3:+66633823 | Msa1118100:CDS |
| AACAGCTCAAACGTGTGCTG+TGG | 0.546422 | 7_3:-66632855 | None:intergenic |
| CGATTATTGCACAAACAAGA+TGG | 0.547169 | 7_3:+66636934 | Msa1118100:CDS |
| ACCTGCACAGGGCTAAGTGT+TGG | 0.548439 | 7_3:-66634908 | None:intergenic |
| ATGGATATTCCCACTCTGCT+CGG | 0.549193 | 7_3:-66636960 | None:intergenic |
| ATGTACACTTGAAGATTTGT+GGG | 0.552958 | 7_3:+66633758 | Msa1118100:CDS |
| TTACTTGCAAAACAATAGGA+TGG | 0.554335 | 7_3:+66634880 | Msa1118100:CDS |
| CACACCTAAAATCTGTTGAT+GGG | 0.557506 | 7_3:-66636308 | None:intergenic |
| TGAGGAGAAGACTCCATCAC+GGG | 0.558881 | 7_3:+66633538 | Msa1118100:CDS |
| CATCTCAACATGTTGTGAGC+CGG | 0.561847 | 7_3:-66637888 | None:intergenic |
| TCATTGAATGAACCGTTGCT+GGG | 0.564464 | 7_3:+66633609 | Msa1118100:CDS |
| CTGAGCATCCATCATTTGAA+AGG | 0.566308 | 7_3:-66637658 | None:intergenic |
| GACTAAGAAACTTAAAGCAA+CGG | 0.573979 | 7_3:+66635650 | Msa1118100:CDS |
| TGGAAGGAAATGGGATGGCA+AGG | 0.585634 | 7_3:+66636279 | Msa1118100:CDS |
| GGATGTCGATGGAAAACGGC+AGG | 0.585718 | 7_3:+66633560 | Msa1118100:CDS |
| AAAATAAAGAAATAAATGAA+AGG | 0.593271 | 7_3:-66632907 | None:intergenic |
| GTGGGATGATGAGAGAAAGA+AGG | 0.593292 | 7_3:+66633776 | Msa1118100:CDS |
| ACAGCTCAAACGTGTGCTGT+GGG | 0.595203 | 7_3:-66632854 | None:intergenic |
| AACAAATGCTTAAATAAAAG+GGG | 0.595384 | 7_3:-66638079 | Msa1118110:intron |
| TGATTATATTGAGAGTAAGA+AGG | 0.599715 | 7_3:+66633638 | Msa1118100:CDS |
| ATTTAAGTGGAGGAAGCTCT+CGG | 0.606705 | 7_3:-66636248 | None:intergenic |
| ACTTAAATCAGATTGTTGGA+AGG | 0.607130 | 7_3:+66636263 | Msa1118100:CDS |
| AGATGGAATCCGAGCAGAGT+GGG | 0.614159 | 7_3:+66636951 | Msa1118100:CDS |
| TGTAAATCACAAGTGAAATG+GGG | 0.618313 | 7_3:+66638017 | Msa1118100:three_prime_UTR |
| TAATCATCACCTCCCAGCAA+CGG | 0.628970 | 7_3:-66633621 | None:intergenic |
| TTCAAATGATGGATGCTCAG+TGG | 0.634607 | 7_3:+66637661 | Msa1118100:CDS |
| ACTGTGCCCATTGCGCAATG+AGG | 0.645478 | 7_3:-66633830 | None:intergenic |
| ATTGTTGGAAGGAAATGGGA+TGG | 0.650850 | 7_3:+66636274 | Msa1118100:CDS |
| GTAAATCACAAGTGAAATGG+GGG | 0.654503 | 7_3:+66638018 | Msa1118100:three_prime_UTR |
| TTGAGGAGAAGACTCCATCA+CGG | 0.656992 | 7_3:+66633537 | Msa1118100:CDS |
| TCTCTATACATACCTGCACA+GGG | 0.703300 | 7_3:-66634919 | None:intergenic |
| GAGGAGAAGACTCCATCACG+GGG | 0.729277 | 7_3:+66633539 | Msa1118100:CDS |
| AAGATGGAATCCGAGCAGAG+TGG | 0.735731 | 7_3:+66636950 | Msa1118100:CDS |
| TCATTGCGCAATGGGCACAG+TGG | 0.737416 | 7_3:+66633832 | Msa1118100:CDS |
| TTGAATGAACCGTTGCTGGG+AGG | 0.740209 | 7_3:+66633612 | Msa1118100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAGAAATAAATGAA+AGG | - | chr7_3:66632910-66632929 | None:intergenic | 10.0% |
| !!! | AATAACTGAATTTTTCAAAA+GGG | - | chr7_3:66633190-66633209 | None:intergenic | 15.0% |
| !!! | AAATAACTGAATTTTTCAAA+AGG | - | chr7_3:66633191-66633210 | None:intergenic | 15.0% |
| !! | ATACTATAATTCTTTACTAT+AGG | - | chr7_3:66633500-66633519 | None:intergenic | 15.0% |
| !! | TAAGAATTGAATAAAAATCA+TGG | - | chr7_3:66634637-66634656 | None:intergenic | 15.0% |
| !! | ATATATATAAAGACAAATGT+CGG | - | chr7_3:66635750-66635769 | None:intergenic | 15.0% |
| !!! | TATTTTTAATATCTGAATTG+TGG | + | chr7_3:66635966-66635985 | Msa1118100:intron | 15.0% |
| !!! | ATTTTTAATATCTGAATTGT+GGG | + | chr7_3:66635967-66635986 | Msa1118100:intron | 15.0% |
| !!! | TGTTTAATTGTTTTACTTTA+AGG | + | chr7_3:66636329-66636348 | Msa1118100:intron | 15.0% |
| !! | AGTAATATTAAATGTATCTT+AGG | - | chr7_3:66637455-66637474 | None:intergenic | 15.0% |
| !! | TAACAAATGCTTAAATAAAA+GGG | - | chr7_3:66638083-66638102 | Msa1118110:intron | 15.0% |
| !! | GAAGTAACAAACAAAAATTA+GGG | - | chr7_3:66633005-66633024 | None:intergenic | 20.0% |
| !! | TTCAAATCAAGAAAAACAAA+GGG | - | chr7_3:66633081-66633100 | None:intergenic | 20.0% |
| !! | ATTCAAATCAAGAAAAACAA+AGG | - | chr7_3:66633082-66633101 | None:intergenic | 20.0% |
| !!! | GTTTTTCTTGATTTGAATTT+CGG | + | chr7_3:66633084-66633103 | Msa1118100:intron | 20.0% |
| !! | AATTTATTGAGTAATTGAAG+AGG | + | chr7_3:66633236-66633255 | Msa1118100:intron | 20.0% |
| !! | TGTTTATCAAAATCTGAAAA+TGG | + | chr7_3:66633312-66633331 | Msa1118100:intron | 20.0% |
| !!! | ATATATATTAAAGTGTTAGC+TGG | + | chr7_3:66633364-66633383 | Msa1118100:intron | 20.0% |
| !!! | AATTGTCGTTATTTTGTATT+TGG | + | chr7_3:66633666-66633685 | Msa1118100:intron | 20.0% |
| !! | TATTAGTGTACTACATATTA+GGG | + | chr7_3:66634283-66634302 | Msa1118100:intron | 20.0% |
| !! | TCAAAATGACAAAAAAATTG+TGG | - | chr7_3:66634524-66634543 | None:intergenic | 20.0% |
| !! | AAATAAGAAGAAAATGCAAA+TGG | + | chr7_3:66634735-66634754 | Msa1118100:intron | 20.0% |
| !! | GTTAAACTTAAAGTTGAAAT+TGG | - | chr7_3:66634991-66635010 | None:intergenic | 20.0% |
| !!! | ATTTAGATCAATTGCATTTT+CGG | - | chr7_3:66635019-66635038 | None:intergenic | 20.0% |
| !!! | ATATCATTTTCAAAAGACAA+AGG | - | chr7_3:66635111-66635130 | None:intergenic | 20.0% |
| !!! | GGAATTTGATGATATATATT+TGG | + | chr7_3:66635282-66635301 | Msa1118100:intron | 20.0% |
| !! | TCTTTGATTATAAATATCAC+AGG | - | chr7_3:66635386-66635405 | None:intergenic | 20.0% |
| !!! | GAACAATCAATTTTAAATTG+TGG | + | chr7_3:66635414-66635433 | Msa1118100:intron | 20.0% |
| !! | TATTTCTTTCTTTCTTTCTT+AGG | + | chr7_3:66635621-66635640 | Msa1118100:intron | 20.0% |
| !! | AAATGCATTAAATACATACT+TGG | - | chr7_3:66635711-66635730 | None:intergenic | 20.0% |
| !!! | TTTATTTATTTCTTTGTTGC+AGG | + | chr7_3:66636188-66636207 | Msa1118100:intron | 20.0% |
| !!! | ATAAGGTTTTATTCAGTTAT+AGG | + | chr7_3:66636376-66636395 | Msa1118100:intron | 20.0% |
| !!! | AAGTATTCTTTAGAAATACT+TGG | + | chr7_3:66636597-66636616 | Msa1118100:intron | 20.0% |
| !! | TAATTTCAAAAAAACAGAGT+TGG | - | chr7_3:66636721-66636740 | None:intergenic | 20.0% |
| !!! | ACTCTGTTTTTTTGAAATTA+TGG | + | chr7_3:66636721-66636740 | Msa1118100:intron | 20.0% |
| !! | TATACATACAAATGCAAATA+CGG | - | chr7_3:66636848-66636867 | None:intergenic | 20.0% |
| !! | AATCAATATCTCATTTATGT+TGG | + | chr7_3:66636996-66637015 | Msa1118100:CDS | 20.0% |
| !!! | GCATTATTATGTTTTTAGAT+TGG | - | chr7_3:66637194-66637213 | None:intergenic | 20.0% |
| !! | TACATTTAATATTACTGTAG+CGG | + | chr7_3:66637459-66637478 | Msa1118100:intron | 20.0% |
| !!! | AAAATTTTGCTATTTTCTGT+AGG | + | chr7_3:66637791-66637810 | Msa1118100:intron | 20.0% |
| !!! | AACATTTTCTAACTACAAAA+TGG | - | chr7_3:66637948-66637967 | None:intergenic | 20.0% |
| !! | GAATACTTTACATACATTTA+AGG | - | chr7_3:66637972-66637991 | None:intergenic | 20.0% |
| !! | AACAAATGCTTAAATAAAAG+GGG | - | chr7_3:66638082-66638101 | Msa1118110:intron | 20.0% |
| !! | CTAACAAATGCTTAAATAAA+AGG | - | chr7_3:66638084-66638103 | Msa1118110:intron | 20.0% |
| ! | CGAAGTAACAAACAAAAATT+AGG | - | chr7_3:66633006-66633025 | None:intergenic | 25.0% |
| ! | GATTTGAATTTCGGTTTATT+CGG | + | chr7_3:66633093-66633112 | Msa1118100:intron | 25.0% |
| ! | GGTTAAATTTGTCAACTTTA+GGG | + | chr7_3:66633144-66633163 | Msa1118100:intron | 25.0% |
| ! | TATGTGACTGAATTTCAAAA+GGG | - | chr7_3:66633263-66633282 | None:intergenic | 25.0% |
| ! | ATATGTGACTGAATTTCAAA+AGG | - | chr7_3:66633264-66633283 | None:intergenic | 25.0% |
| !!! | TGTATTTTTTTGACTCGTAT+AGG | + | chr7_3:66633470-66633489 | Msa1118100:intron | 25.0% |
| ! | TGATTATATTGAGAGTAAGA+AGG | + | chr7_3:66633638-66633657 | Msa1118100:CDS | 25.0% |
| ! | ACTGTCAAGCATAAATTTAT+AGG | - | chr7_3:66633886-66633905 | None:intergenic | 25.0% |
| ! | TAGTGAAAAACAATGTTAGA+CGG | + | chr7_3:66633948-66633967 | Msa1118100:intron | 25.0% |
| !! | TTTTCCGTTAGTAATAGTTA+TGG | + | chr7_3:66634013-66634032 | Msa1118100:intron | 25.0% |
| ! | AAAAGAATCATTCTTAGGAT+TGG | + | chr7_3:66634142-66634161 | Msa1118100:intron | 25.0% |
| ! | GTATTAGTGTACTACATATT+AGG | + | chr7_3:66634282-66634301 | Msa1118100:intron | 25.0% |
| !!! | ATTGTTTTGCAAGTAAAAAC+CGG | - | chr7_3:66634876-66634895 | None:intergenic | 25.0% |
| !! | GTTTTTACTTGCAAAACAAT+AGG | + | chr7_3:66634876-66634895 | Msa1118100:CDS | 25.0% |
| !!! | AACACTTACTTGATAATGAT+AGG | + | chr7_3:66635164-66635183 | Msa1118100:intron | 25.0% |
| ! | TAATGATAGGATATTATCAC+TGG | + | chr7_3:66635177-66635196 | Msa1118100:intron | 25.0% |
| !! | GAAAACAACGAGTAATTTTA+TGG | - | chr7_3:66635324-66635343 | None:intergenic | 25.0% |
| ! | TATAACAAAATGGTATCAAG+AGG | - | chr7_3:66635882-66635901 | None:intergenic | 25.0% |
| !! | GACATGTATAGCAATTTTAT+TGG | - | chr7_3:66636049-66636068 | None:intergenic | 25.0% |
| ! | ATAAAACCTTATCCATATTC+AGG | - | chr7_3:66636368-66636387 | None:intergenic | 25.0% |
| !!! | AGGATTCATTGACTTAATAA+TGG | + | chr7_3:66636431-66636450 | Msa1118100:intron | 25.0% |
| !!! | GGATTCATTGACTTAATAAT+GGG | + | chr7_3:66636432-66636451 | Msa1118100:intron | 25.0% |
| ! | GAATACTTGTGACATATATA+AGG | - | chr7_3:66636585-66636604 | None:intergenic | 25.0% |
| ! | CTAAAAGTTTCATCAAACTT+CGG | + | chr7_3:66636681-66636700 | Msa1118100:intron | 25.0% |
| !!! | CTGTTTTTTTGAAATTATGG+AGG | + | chr7_3:66636724-66636743 | Msa1118100:intron | 25.0% |
| !! | TTTGAACCATTATTTTCACT+CGG | - | chr7_3:66637217-66637236 | None:intergenic | 25.0% |
| ! | AATAATGGTTCAAATCAAGT+TGG | + | chr7_3:66637223-66637242 | Msa1118100:intron | 25.0% |
| ! | CCAAACATAATAAATGAATG+TGG | - | chr7_3:66637299-66637318 | None:intergenic | 25.0% |
| ! | CCACATTCATTTATTATGTT+TGG | + | chr7_3:66637296-66637315 | Msa1118100:intron | 25.0% |
| ! | ATCAACAATTGCTGAAAATA+AGG | - | chr7_3:66637491-66637510 | None:intergenic | 25.0% |
| !! | GATTTTACATGAAAAATGAG+AGG | - | chr7_3:66637528-66637547 | None:intergenic | 25.0% |
| ! | ATTAAACTGTGTTTGTTCAT+TGG | + | chr7_3:66637722-66637741 | Msa1118100:intron | 25.0% |
| ! | TTATTAGCATTATTCTGTGA+TGG | + | chr7_3:66637754-66637773 | Msa1118100:intron | 25.0% |
| !!! | TGCTCATTTTAGTTTAACAT+TGG | + | chr7_3:66637916-66637935 | Msa1118100:three_prime_UTR | 25.0% |
| ! | ATGTAAATCACAAGTGAAAT+GGG | + | chr7_3:66638016-66638035 | Msa1118100:three_prime_UTR | 25.0% |
| ! | CAGAAGATTATTCTGATATT+TGG | - | chr7_3:66638046-66638065 | Msa1118110:intron | 25.0% |
| GGGTTAAATTTGTCAACTTT+AGG | + | chr7_3:66633143-66633162 | Msa1118100:intron | 30.0% | |
| TTGATAAACACCAAACCATA+GGG | - | chr7_3:66633302-66633321 | None:intergenic | 30.0% | |
| TTTGATAAACACCAAACCAT+AGG | - | chr7_3:66633303-66633322 | None:intergenic | 30.0% | |
| ! | TTCTTGAACTTGATGGTTAT+GGG | + | chr7_3:66633436-66633455 | Msa1118100:intron | 30.0% |
| TGATGTCTTCAAAAACATTG+AGG | + | chr7_3:66633520-66633539 | Msa1118100:exon | 30.0% | |
| !! | TGTCGTTATTTTGTATTTGG+AGG | + | chr7_3:66633669-66633688 | Msa1118100:intron | 30.0% |
| !! | GTCGTTATTTTGTATTTGGA+GGG | + | chr7_3:66633670-66633689 | Msa1118100:intron | 30.0% |
| TATGTACACTTGAAGATTTG+TGG | + | chr7_3:66633757-66633776 | Msa1118100:CDS | 30.0% | |
| ATGTACACTTGAAGATTTGT+GGG | + | chr7_3:66633758-66633777 | Msa1118100:CDS | 30.0% | |
| CGAATAAAATCCTATTCCAA+TGG | + | chr7_3:66634038-66634057 | Msa1118100:intron | 30.0% | |
| CTGCTAAAAGAATCATTCTT+AGG | + | chr7_3:66634137-66634156 | Msa1118100:intron | 30.0% | |
| ! | AATTGGCACTGAATTTAATG+AGG | + | chr7_3:66634234-66634253 | Msa1118100:intron | 30.0% |
| ATTAGGGTTGAATCTCATTA+AGG | + | chr7_3:66634299-66634318 | Msa1118100:intron | 30.0% | |
| ! | TGCAGCAATTCATATTGATT+GGG | - | chr7_3:66634414-66634433 | None:intergenic | 30.0% |
| ATGCAGCAATTCATATTGAT+TGG | - | chr7_3:66634415-66634434 | None:intergenic | 30.0% | |
| AATGACAAAAAAATTGTGGC+TGG | - | chr7_3:66634520-66634539 | None:intergenic | 30.0% | |
| TTTCACAAGCTACATAAATG+AGG | - | chr7_3:66634663-66634682 | None:intergenic | 30.0% | |
| ! | TATGTAGCTTGTGAAAAATC+CGG | + | chr7_3:66634667-66634686 | Msa1118100:intron | 30.0% |
| ! | CTATTTTCTTCATTGTTGAC+TGG | + | chr7_3:66634707-66634726 | Msa1118100:intron | 30.0% |
| TTACTTGCAAAACAATAGGA+TGG | + | chr7_3:66634880-66634899 | Msa1118100:CDS | 30.0% | |
| ! | GTTGAAATTGGTTCCTTAAT+TGG | - | chr7_3:66634979-66634998 | None:intergenic | 30.0% |
| ! | ATCAATTGCATTTTCGGATA+GGG | - | chr7_3:66635013-66635032 | None:intergenic | 30.0% |
| ! | CATTTTCAAAAGACAAAGGA+TGG | - | chr7_3:66635107-66635126 | None:intergenic | 30.0% |
| CACGTGATCTTTAGTTAAAA+AGG | - | chr7_3:66635349-66635368 | None:intergenic | 30.0% | |
| AATATGACATAACCACATGT+AGG | - | chr7_3:66635595-66635614 | None:intergenic | 30.0% | |
| GACTAAGAAACTTAAAGCAA+CGG | + | chr7_3:66635650-66635669 | Msa1118100:CDS | 30.0% | |
| AAATGTCGGTAATGTGATTA+GGG | - | chr7_3:66635736-66635755 | None:intergenic | 30.0% | |
| ! | AGAGCATCACTATAACAAAA+TGG | - | chr7_3:66635892-66635911 | None:intergenic | 30.0% |
| TAATATCTGAATTGTGGGTA+TGG | + | chr7_3:66635972-66635991 | Msa1118100:intron | 30.0% | |
| AATATCTGAATTGTGGGTAT+GGG | + | chr7_3:66635973-66635992 | Msa1118100:intron | 30.0% | |
| TGGGGTTGTCAATTTATAAA+TGG | + | chr7_3:66635992-66636011 | Msa1118100:intron | 30.0% | |
| ! | TCTTTTACAACTGTGGAAAT+TGG | + | chr7_3:66636215-66636234 | Msa1118100:CDS | 30.0% |
| TTCCAACAATCTGATTTAAG+TGG | - | chr7_3:66636264-66636283 | None:intergenic | 30.0% | |
| ACTTAAATCAGATTGTTGGA+AGG | + | chr7_3:66636263-66636282 | Msa1118100:CDS | 30.0% | |
| TACTGTAAGACCATTAAGTA+AGG | + | chr7_3:66636411-66636430 | Msa1118100:intron | 30.0% | |
| GTCAATGAATCCTTACTTAA+TGG | - | chr7_3:66636424-66636443 | None:intergenic | 30.0% | |
| !! | TTCATTGACTTAATAATGGG+AGG | + | chr7_3:66636435-66636454 | Msa1118100:intron | 30.0% |
| GATGTATGTCAAACCTATAA+GGG | - | chr7_3:66636479-66636498 | None:intergenic | 30.0% | |
| AGATGTATGTCAAACCTATA+AGG | - | chr7_3:66636480-66636499 | None:intergenic | 30.0% | |
| ACATACATCTACTTGTTTGA+TGG | + | chr7_3:66636490-66636509 | Msa1118100:intron | 30.0% | |
| !! | CTTGTTTGATGGTTTGATTT+TGG | + | chr7_3:66636501-66636520 | Msa1118100:intron | 30.0% |
| !!! | TGGTTTGATTTTGGTTCTTT+AGG | + | chr7_3:66636510-66636529 | Msa1118100:intron | 30.0% |
| !!! | GGTTTGATTTTGGTTCTTTA+GGG | + | chr7_3:66636511-66636530 | Msa1118100:intron | 30.0% |
| !!! | GTTTGATTTTGGTTCTTTAG+GGG | + | chr7_3:66636512-66636531 | Msa1118100:intron | 30.0% |
| GACATATATAAGGTACATGT+GGG | - | chr7_3:66636575-66636594 | None:intergenic | 30.0% | |
| TGACATATATAAGGTACATG+TGG | - | chr7_3:66636576-66636595 | None:intergenic | 30.0% | |
| ! | AGTCTTTATAAAGAGTATGC+AGG | - | chr7_3:66636659-66636678 | None:intergenic | 30.0% |
| AATTCTCTCAAGAAATTCAG+TGG | + | chr7_3:66637051-66637070 | Msa1118100:intron | 30.0% | |
| ! | TTGAACCATTATTTTCACTC+GGG | - | chr7_3:66637216-66637235 | None:intergenic | 30.0% |
| CTCCAGTATAAAAGATATAC+CGG | + | chr7_3:66637869-66637888 | Msa1118100:CDS | 30.0% | |
| CATGTAAATCACAAGTGAAA+TGG | + | chr7_3:66638015-66638034 | Msa1118100:three_prime_UTR | 30.0% | |
| TGTAAATCACAAGTGAAATG+GGG | + | chr7_3:66638017-66638036 | Msa1118100:three_prime_UTR | 30.0% | |
| ! | TACACTTTTCGTGCTTGATA+AGG | - | chr7_3:66632947-66632966 | None:intergenic | 35.0% |
| GAATTTCGGTTTATTCGGTT+TGG | + | chr7_3:66633098-66633117 | Msa1118100:intron | 35.0% | |
| TTTCAGTTGAGAGGTGAAAA+TGG | + | chr7_3:66633121-66633140 | Msa1118100:intron | 35.0% | |
| TTCAGTTGAGAGGTGAAAAT+GGG | + | chr7_3:66633122-66633141 | Msa1118100:intron | 35.0% | |
| !! | TGTTGATTTGAGTAACCCTA+TGG | + | chr7_3:66633284-66633303 | Msa1118100:intron | 35.0% |
| ATTTGAGTAACCCTATGGTT+TGG | + | chr7_3:66633289-66633308 | Msa1118100:intron | 35.0% | |
| GGAGTGATGAATGAAAAGAA+TGG | + | chr7_3:66633385-66633404 | Msa1118100:intron | 35.0% | |
| GATGATGTTCTTGAACTTGA+TGG | + | chr7_3:66633429-66633448 | Msa1118100:intron | 35.0% | |
| ! | GTTCTTGAACTTGATGGTTA+TGG | + | chr7_3:66633435-66633454 | Msa1118100:intron | 35.0% |
| ! | GAAAGAAGGCACAAATTCAT+TGG | + | chr7_3:66633790-66633809 | Msa1118100:CDS | 35.0% |
| AGGTATGTTTACGATTGAGT+TGG | + | chr7_3:66633857-66633876 | Msa1118100:intron | 35.0% | |
| TAGTTCATACGTTCTATGCT+TGG | + | chr7_3:66633976-66633995 | Msa1118100:intron | 35.0% | |
| CGCTCCATAACTATTACTAA+CGG | - | chr7_3:66634020-66634039 | None:intergenic | 35.0% | |
| CGTAAGAGTTCAGATTCATA+GGG | - | chr7_3:66634107-66634126 | None:intergenic | 35.0% | |
| ACGTAAGAGTTCAGATTCAT+AGG | - | chr7_3:66634108-66634127 | None:intergenic | 35.0% | |
| GTATTAGTGGAGTGAATTGA+TGG | + | chr7_3:66634196-66634215 | Msa1118100:intron | 35.0% | |
| ! | GGCTGGCTATACAAAATTTA+GGG | - | chr7_3:66634503-66634522 | None:intergenic | 35.0% |
| ! | TGGCTGGCTATACAAAATTT+AGG | - | chr7_3:66634504-66634523 | None:intergenic | 35.0% |
| ! | ATGTAGCTTGTGAAAAATCC+GGG | + | chr7_3:66634668-66634687 | Msa1118100:intron | 35.0% |
| AGAGATATATACGTATGACC+CGG | - | chr7_3:66634689-66634708 | None:intergenic | 35.0% | |
| ! | TAGAACAATGTTTGCTGCAA+AGG | - | chr7_3:66634810-66634829 | None:intergenic | 35.0% |
| TTTGCAGCAAACATTGTTCT+AGG | + | chr7_3:66634809-66634828 | Msa1118100:intron | 35.0% | |
| TTGCAGCAAACATTGTTCTA+GGG | + | chr7_3:66634810-66634829 | Msa1118100:intron | 35.0% | |
| !! | AAGCTCGTTTTAGCCAATTA+AGG | + | chr7_3:66634963-66634982 | Msa1118100:intron | 35.0% |
| ! | GATCAATTGCATTTTCGGAT+AGG | - | chr7_3:66635014-66635033 | None:intergenic | 35.0% |
| ! | TGTGATGGAGTTCAATTCAA+AGG | - | chr7_3:66635071-66635090 | None:intergenic | 35.0% |
| TTTGAAAATGATATGCTGCC+AGG | + | chr7_3:66635117-66635136 | Msa1118100:intron | 35.0% | |
| TTGAAAATGATATGCTGCCA+GGG | + | chr7_3:66635118-66635137 | Msa1118100:intron | 35.0% | |
| ATCACAAATCAGAATATCCC+TGG | - | chr7_3:66635138-66635157 | None:intergenic | 35.0% | |
| ! | TACCTCACTGTATTGTGTTT+TGG | + | chr7_3:66635229-66635248 | Msa1118100:intron | 35.0% |
| TTCCAAAACACAATACAGTG+AGG | - | chr7_3:66635234-66635253 | None:intergenic | 35.0% | |
| !! | TCACTGTATTGTGTTTTGGA+AGG | + | chr7_3:66635233-66635252 | Msa1118100:intron | 35.0% |
| !! | GTGGGTAATGGATATTTCTT+TGG | + | chr7_3:66635261-66635280 | Msa1118100:intron | 35.0% |
| ! | AACTTCTGTAGTCTCTTTTG+TGG | + | chr7_3:66635535-66635554 | Msa1118100:intron | 35.0% |
| TCTCAATAATCTCCTACATG+TGG | + | chr7_3:66635580-66635599 | Msa1118100:intron | 35.0% | |
| !!! | TCTGTTTTAGAACCGTCAAA+GGG | - | chr7_3:66635685-66635704 | None:intergenic | 35.0% |
| !!! | ATCTGTTTTAGAACCGTCAA+AGG | - | chr7_3:66635686-66635705 | None:intergenic | 35.0% |
| CAAATGTCGGTAATGTGATT+AGG | - | chr7_3:66635737-66635756 | None:intergenic | 35.0% | |
| ATATCTGAATTGTGGGTATG+GGG | + | chr7_3:66635974-66635993 | Msa1118100:intron | 35.0% | |
| ATAAATGGAATGTCCTTCCA+TGG | + | chr7_3:66636007-66636026 | Msa1118100:intron | 35.0% | |
| CCTTTAAATTCATCCATGGA+AGG | - | chr7_3:66636023-66636042 | None:intergenic | 35.0% | |
| CCTTCCATGGATGAATTTAA+AGG | + | chr7_3:66636020-66636039 | Msa1118100:intron | 35.0% | |
| GTCACCTTTAAATTCATCCA+TGG | - | chr7_3:66636027-66636046 | None:intergenic | 35.0% | |
| CAACAATCTGATTTAAGTGG+AGG | - | chr7_3:66636261-66636280 | None:intergenic | 35.0% | |
| CTCCACTTAAATCAGATTGT+TGG | + | chr7_3:66636259-66636278 | Msa1118100:CDS | 35.0% | |
| ATCAGATTGTTGGAAGGAAA+TGG | + | chr7_3:66636269-66636288 | Msa1118100:CDS | 35.0% | |
| TCAGATTGTTGGAAGGAAAT+GGG | + | chr7_3:66636270-66636289 | Msa1118100:CDS | 35.0% | |
| CACACCTAAAATCTGTTGAT+GGG | - | chr7_3:66636311-66636330 | None:intergenic | 35.0% | |
| ACACACCTAAAATCTGTTGA+TGG | - | chr7_3:66636312-66636331 | None:intergenic | 35.0% | |
| CAAAATAGTCTGACCCTTAT+AGG | + | chr7_3:66636463-66636482 | Msa1118100:intron | 35.0% | |
| ATACGGTAGAAGAAACTTAC+TGG | - | chr7_3:66636831-66636850 | None:intergenic | 35.0% | |
| CGATTATTGCACAAACAAGA+TGG | + | chr7_3:66636934-66636953 | Msa1118100:CDS | 35.0% | |
| TAATGCCCGAGTGAAAATAA+TGG | + | chr7_3:66637208-66637227 | Msa1118100:intron | 35.0% | |
| AGGGAACTGTATAGATAGTT+TGG | + | chr7_3:66637359-66637378 | Msa1118100:intron | 35.0% | |
| GGGAACTGTATAGATAGTTT+GGG | + | chr7_3:66637360-66637379 | Msa1118100:intron | 35.0% | |
| ! | CTAGTTAGATAAGGTTTGGT+TGG | - | chr7_3:66637418-66637437 | None:intergenic | 35.0% |
| CAACCAAACCTTATCTAACT+AGG | + | chr7_3:66637416-66637435 | Msa1118100:intron | 35.0% | |
| TTGCATTGCCTTTCAAATGA+TGG | + | chr7_3:66637650-66637669 | Msa1118100:CDS | 35.0% | |
| ! | CGGTATATCTTTTATACTGG+AGG | - | chr7_3:66637871-66637890 | None:intergenic | 35.0% |
| ! | AGCCGGTATATCTTTTATAC+TGG | - | chr7_3:66637874-66637893 | None:intergenic | 35.0% |
| GTAAATCACAAGTGAAATGG+GGG | + | chr7_3:66638018-66638037 | Msa1118100:three_prime_UTR | 35.0% | |
| ACGAGTGAAACGAATCTCTT+TGG | - | chr7_3:66633035-66633054 | None:intergenic | 40.0% | |
| CGTTTCACTCGTTGAAATTC+AGG | + | chr7_3:66633043-66633062 | Msa1118100:five_prime_UTR | 40.0% | |
| TCAGTTGAGAGGTGAAAATG+GGG | + | chr7_3:66633123-66633142 | Msa1118100:intron | 40.0% | |
| CAGGAACATTTGGATACTTC+TGG | + | chr7_3:66633579-66633598 | Msa1118100:CDS | 40.0% | |
| TTCATTGAATGAACCGTTGC+TGG | + | chr7_3:66633608-66633627 | Msa1118100:CDS | 40.0% | |
| TCATTGAATGAACCGTTGCT+GGG | + | chr7_3:66633609-66633628 | Msa1118100:CDS | 40.0% | |
| !! | CGTTCTATGCTTGGTTTTTG+TGG | + | chr7_3:66633985-66634004 | Msa1118100:intron | 40.0% |
| AGTGGCAAATCCATTGGAAT+AGG | - | chr7_3:66634051-66634070 | None:intergenic | 40.0% | |
| ATTTGCCACTCTTGCAAACA+AGG | + | chr7_3:66634061-66634080 | Msa1118100:intron | 40.0% | |
| ! | ACTTTCCTTGTTTGCAAGAG+TGG | - | chr7_3:66634069-66634088 | None:intergenic | 40.0% |
| CTGAACTCTTACGTTTAGAG+TGG | + | chr7_3:66634114-66634133 | Msa1118100:intron | 40.0% | |
| ! | GTATGATCAAGCACGTCTTT+TGG | + | chr7_3:66634164-66634183 | Msa1118100:intron | 40.0% |
| TTAGTGGAGTGAATTGATGG+AGG | + | chr7_3:66634199-66634218 | Msa1118100:intron | 40.0% | |
| TTAATGAGGTCGCAATCACA+AGG | + | chr7_3:66634248-66634267 | Msa1118100:intron | 40.0% | |
| ! | TGCAAATGGCATGCTTTTAG+TGG | + | chr7_3:66634749-66634768 | Msa1118100:intron | 40.0% |
| TCTCTATACATACCTGCACA+GGG | - | chr7_3:66634922-66634941 | None:intergenic | 40.0% | |
| ATCTCTATACATACCTGCAC+AGG | - | chr7_3:66634923-66634942 | None:intergenic | 40.0% | |
| ACAAAGGATGGTTGAGTTAC+GGG | - | chr7_3:66635095-66635114 | None:intergenic | 40.0% | |
| GACAAAGGATGGTTGAGTTA+CGG | - | chr7_3:66635096-66635115 | None:intergenic | 40.0% | |
| AGACTACAGAAGTTCAGCAA+AGG | - | chr7_3:66635529-66635548 | None:intergenic | 40.0% | |
| ! | TGTAGTCTCTTTTGTGGAGT+TGG | + | chr7_3:66635541-66635560 | Msa1118100:intron | 40.0% |
| AGATTGAACAGGCAGAATAC+AGG | - | chr7_3:66635839-66635858 | None:intergenic | 40.0% | |
| AAATGACAGCGAGATTGAAC+AGG | - | chr7_3:66635850-66635869 | None:intergenic | 40.0% | |
| AGATGCGCAAAAGCAAGATA+TGG | - | chr7_3:66636098-66636117 | None:intergenic | 40.0% | |
| ATTTAAGTGGAGGAAGCTCT+CGG | - | chr7_3:66636251-66636270 | None:intergenic | 40.0% | |
| ATTGTTGGAAGGAAATGGGA+TGG | + | chr7_3:66636274-66636293 | Msa1118100:CDS | 40.0% | |
| ! | CAGACCCATCAACAGATTTT+AGG | + | chr7_3:66636304-66636323 | Msa1118100:CDS | 40.0% |
| CCCAAAAACTAGCTCAAGAA+GGG | - | chr7_3:66636633-66636652 | None:intergenic | 40.0% | |
| !!! | CCCTTCTTGAGCTAGTTTTT+GGG | + | chr7_3:66636630-66636649 | Msa1118100:intron | 40.0% |
| GAGCTCATTAGATCTAACCA+TGG | + | chr7_3:66636746-66636765 | Msa1118100:intron | 40.0% | |
| ! | TAGATCTAACCATGGTTTGC+AGG | + | chr7_3:66636754-66636773 | Msa1118100:intron | 40.0% |
| ! | AGATCTAACCATGGTTTGCA+GGG | + | chr7_3:66636755-66636774 | Msa1118100:intron | 40.0% |
| ACTTCTGCGCAAAAAAGATG+AGG | - | chr7_3:66636806-66636825 | None:intergenic | 40.0% | |
| TTTCTACTTGGCAATGCCAT+AGG | + | chr7_3:66636900-66636919 | Msa1118100:intron | 40.0% | |
| AATCGCTGAAATGAGACCTA+TGG | - | chr7_3:66636919-66636938 | None:intergenic | 40.0% | |
| GAATATCCATTTGCAGTAGC+TGG | + | chr7_3:66636973-66636992 | Msa1118100:CDS | 40.0% | |
| TTGATTCCAGCTACTGCAAA+TGG | - | chr7_3:66636982-66637001 | None:intergenic | 40.0% | |
| ATTTATGTTGGTGCAGATGC+TGG | + | chr7_3:66637008-66637027 | Msa1118100:CDS | 40.0% | |
| GACCATATCTCATCCAATGT+GGG | - | chr7_3:66637103-66637122 | None:intergenic | 40.0% | |
| AGACCATATCTCATCCAATG+TGG | - | chr7_3:66637104-66637123 | None:intergenic | 40.0% | |
| AAAACAAGCGTACGAGATAG+AGG | - | chr7_3:66637154-66637173 | None:intergenic | 40.0% | |
| !!! | CTTGTTTTGTTACGATGAGC+TGG | + | chr7_3:66637166-66637185 | Msa1118100:intron | 40.0% |
| GACTCGATTGTACTTTGCAA+TGG | - | chr7_3:66637326-66637345 | None:intergenic | 40.0% | |
| CTATCTATACAGTTCCCTTG+AGG | - | chr7_3:66637357-66637376 | None:intergenic | 40.0% | |
| CCACCTAGTTAGATAAGGTT+TGG | - | chr7_3:66637422-66637441 | None:intergenic | 40.0% | |
| CCAAACCTTATCTAACTAGG+TGG | + | chr7_3:66637419-66637438 | Msa1118100:intron | 40.0% | |
| GTTCTCCACCTAGTTAGATA+AGG | - | chr7_3:66637427-66637446 | None:intergenic | 40.0% | |
| AGAAGATGGAACAACTGCAA+CGG | - | chr7_3:66637568-66637587 | None:intergenic | 40.0% | |
| AGTTGTTCCATCTTCTTCGT+CGG | + | chr7_3:66637572-66637591 | Msa1118100:intron | 40.0% | |
| ! | CGTCGGGAATATGTTTTCTA+CGG | + | chr7_3:66637589-66637608 | Msa1118100:CDS | 40.0% |
| CTGAGCATCCATCATTTGAA+AGG | - | chr7_3:66637661-66637680 | None:intergenic | 40.0% | |
| !! | TTCAAATGATGGATGCTCAG+TGG | + | chr7_3:66637661-66637680 | Msa1118100:CDS | 40.0% |
| TGCAAAGCGTGCTACATATA+TGG | + | chr7_3:66637686-66637705 | Msa1118100:CDS | 40.0% | |
| !! | TCGGTTTGGTTTCAGTTGAG+AGG | + | chr7_3:66633112-66633131 | Msa1118100:intron | 45.0% |
| TTGAGGAGAAGACTCCATCA+CGG | + | chr7_3:66633537-66633556 | Msa1118100:CDS | 45.0% | |
| TGGAAAACGGCAGGAACATT+TGG | + | chr7_3:66633569-66633588 | Msa1118100:CDS | 45.0% | |
| TAATCATCACCTCCCAGCAA+CGG | - | chr7_3:66633624-66633643 | None:intergenic | 45.0% | |
| GTGGGATGATGAGAGAAAGA+AGG | + | chr7_3:66633776-66633795 | Msa1118100:CDS | 45.0% | |
| TTTCGAACCTCATTGCGCAA+TGG | + | chr7_3:66633823-66633842 | Msa1118100:CDS | 45.0% | |
| TTCGAACCTCATTGCGCAAT+GGG | + | chr7_3:66633824-66633843 | Msa1118100:CDS | 45.0% | |
| TGCAAGAGTGGCAAATCCAT+TGG | - | chr7_3:66634057-66634076 | None:intergenic | 45.0% | |
| !!! | AAGCACGTCTTTTGGAGCTT+GGG | + | chr7_3:66634172-66634191 | Msa1118100:intron | 45.0% |
| !! | TTGGAGCTTGGGAGTATTAG+TGG | + | chr7_3:66634183-66634202 | Msa1118100:intron | 45.0% |
| TGGAGTGAATTGATGGAGGA+GGG | + | chr7_3:66634203-66634222 | Msa1118100:intron | 45.0% | |
| GGAGGAGGGTGATTGAAAAT+TGG | + | chr7_3:66634217-66634236 | Msa1118100:intron | 45.0% | |
| !! | GCAAACATTGTTCTAGGGTC+TGG | + | chr7_3:66634815-66634834 | Msa1118100:intron | 45.0% |
| ! | CTTTTATCGCATTCCACTGC+CGG | + | chr7_3:66634854-66634873 | Msa1118100:CDS | 45.0% |
| TTGCAAGTAAAAACCGGCAG+TGG | - | chr7_3:66634870-66634889 | None:intergenic | 45.0% | |
| CAAAGGATGGTTGAGTTACG+GGG | - | chr7_3:66635094-66635113 | None:intergenic | 45.0% | |
| ! | CAGTGAGGTATTCGAGAAAC+TGG | - | chr7_3:66635219-66635238 | None:intergenic | 45.0% |
| !!! | TGTGTTTTGGAAGGCATCAG+TGG | + | chr7_3:66635242-66635261 | Msa1118100:intron | 45.0% |
| !!! | GTGTTTTGGAAGGCATCAGT+GGG | + | chr7_3:66635243-66635262 | Msa1118100:intron | 45.0% |
| ! | AGGACGCTCTTTTACAACTG+TGG | + | chr7_3:66636208-66636227 | Msa1118100:intron | 45.0% |
| !!! | GCCCTTCTTGAGCTAGTTTT+TGG | + | chr7_3:66636629-66636648 | Msa1118100:intron | 45.0% |
| GCCCAAAAACTAGCTCAAGA+AGG | - | chr7_3:66636634-66636653 | None:intergenic | 45.0% | |
| ! | GATCTAACCATGGTTTGCAG+GGG | + | chr7_3:66636756-66636775 | Msa1118100:intron | 45.0% |
| TAGCCTACCGCATTTCTACT+TGG | + | chr7_3:66636888-66636907 | Msa1118100:intron | 45.0% | |
| TTGCCAAGTAGAAATGCGGT+AGG | - | chr7_3:66636894-66636913 | None:intergenic | 45.0% | |
| GGCATTGCCAAGTAGAAATG+CGG | - | chr7_3:66636898-66636917 | None:intergenic | 45.0% | |
| ATGGATATTCCCACTCTGCT+CGG | - | chr7_3:66636963-66636982 | None:intergenic | 45.0% | |
| CAGATGCTGGATCTTCAATC+AGG | + | chr7_3:66637021-66637040 | Msa1118100:CDS | 45.0% | |
| ACATGTTGAGAGTCCCACAT+TGG | + | chr7_3:66637087-66637106 | Msa1118100:intron | 45.0% | |
| GTCCCACATTGGATGAGATA+TGG | + | chr7_3:66637098-66637117 | Msa1118100:intron | 45.0% | |
| TCGAGTCTGAATTTGCCTCA+AGG | + | chr7_3:66637339-66637358 | Msa1118100:intron | 45.0% | |
| CGAGTCTGAATTTGCCTCAA+GGG | + | chr7_3:66637340-66637359 | Msa1118100:intron | 45.0% | |
| AAGATGGAACAACTGCAACG+GGG | - | chr7_3:66637566-66637585 | None:intergenic | 45.0% | |
| GAAGATGGAACAACTGCAAC+GGG | - | chr7_3:66637567-66637586 | None:intergenic | 45.0% | |
| GTTGTTCCATCTTCTTCGTC+GGG | + | chr7_3:66637573-66637592 | Msa1118100:intron | 45.0% | |
| CATATTCCCGACGAAGAAGA+TGG | - | chr7_3:66637582-66637601 | None:intergenic | 45.0% | |
| ! | ATGTTTTCTACGGCTGCTTG+AGG | + | chr7_3:66637599-66637618 | Msa1118100:CDS | 45.0% |
| CATCTCAACATGTTGTGAGC+CGG | - | chr7_3:66637891-66637910 | None:intergenic | 45.0% | |
| TGAGGAGAAGACTCCATCAC+GGG | + | chr7_3:66633538-66633557 | Msa1118100:CDS | 50.0% | |
| ACGGGGATGTCGATGGAAAA+CGG | + | chr7_3:66633556-66633575 | Msa1118100:CDS | 50.0% | |
| TTGAATGAACCGTTGCTGGG+AGG | + | chr7_3:66633612-66633631 | Msa1118100:CDS | 50.0% | |
| !!! | CAAGCACGTCTTTTGGAGCT+TGG | + | chr7_3:66634171-66634190 | Msa1118100:intron | 50.0% |
| GTGGAGTGAATTGATGGAGG+AGG | + | chr7_3:66634202-66634221 | Msa1118100:intron | 50.0% | |
| ATGAGGTCGCAATCACAAGG+TGG | + | chr7_3:66634251-66634270 | Msa1118100:intron | 50.0% | |
| !! | TGGAAGGCATCAGTGGGTAA+TGG | + | chr7_3:66635249-66635268 | Msa1118100:intron | 50.0% |
| CGGCTTGAAGTTCCCTTTGA+CGG | + | chr7_3:66635670-66635689 | Msa1118100:CDS | 50.0% | |
| TGGAAGGAAATGGGATGGCA+AGG | + | chr7_3:66636279-66636298 | Msa1118100:CDS | 50.0% | |
| GAGGGGCCTGAATATGGATA+AGG | + | chr7_3:66636359-66636378 | Msa1118100:intron | 50.0% | |
| AGCTCAAGAAGGGCGATGAT+TGG | - | chr7_3:66636623-66636642 | None:intergenic | 50.0% | |
| AAGATGGAATCCGAGCAGAG+TGG | + | chr7_3:66636950-66636969 | Msa1118100:CDS | 50.0% | |
| AGATGGAATCCGAGCAGAGT+GGG | + | chr7_3:66636951-66636970 | Msa1118100:CDS | 50.0% | |
| ! | TTTTCTACGGCTGCTTGAGG+AGG | + | chr7_3:66637602-66637621 | Msa1118100:CDS | 50.0% |
| GCTGCTTGAGGAGGATGAAA+TGG | + | chr7_3:66637611-66637630 | Msa1118100:CDS | 50.0% | |
| GAGGAGAAGACTCCATCACG+GGG | + | chr7_3:66633539-66633558 | Msa1118100:CDS | 55.0% | |
| TTCCATCGACATCCCCGTGA+TGG | - | chr7_3:66633554-66633573 | None:intergenic | 55.0% | |
| GGATGTCGATGGAAAACGGC+AGG | + | chr7_3:66633560-66633579 | Msa1118100:CDS | 55.0% | |
| ACTGTGCCCATTGCGCAATG+AGG | - | chr7_3:66633833-66633852 | None:intergenic | 55.0% | |
| TCATTGCGCAATGGGCACAG+TGG | + | chr7_3:66633832-66633851 | Msa1118100:CDS | 55.0% | |
| GGTCGCAATCACAAGGTGGT+TGG | + | chr7_3:66634255-66634274 | Msa1118100:intron | 55.0% | |
| !! | TGCACAGGGCTAAGTGTTGG+AGG | - | chr7_3:66634908-66634927 | None:intergenic | 55.0% |
| TCCAACACTTAGCCCTGTGC+AGG | + | chr7_3:66634907-66634926 | Msa1118100:CDS | 55.0% | |
| ACCTGCACAGGGCTAAGTGT+TGG | - | chr7_3:66634911-66634930 | None:intergenic | 55.0% | |
| GGTTGAGTTACGGGGTGTGA+TGG | - | chr7_3:66635086-66635105 | None:intergenic | 55.0% | |
| ! | CTAACCATGGTTTGCAGGGG+TGG | + | chr7_3:66636759-66636778 | Msa1118100:intron | 55.0% |
| CTCCATCACGGGGATGTCGA+TGG | + | chr7_3:66633549-66633568 | Msa1118100:CDS | 60.0% | |
| GCGCAATGGGCACAGTGGTT+AGG | + | chr7_3:66633837-66633856 | Msa1118100:CDS | 60.0% | |
| AGTGGAGGAAGCTCTCGGTC+AGG | - | chr7_3:66636246-66636265 | None:intergenic | 60.0% | |
| ! | ACCATGGTTTGCAGGGGTGG+AGG | + | chr7_3:66636762-66636781 | Msa1118100:intron | 60.0% |
| ! | CCATGGTTTGCAGGGGTGGA+GGG | + | chr7_3:66636763-66636782 | Msa1118100:intron | 60.0% |
| CCCTCCACCCCTGCAAACCA+TGG | - | chr7_3:66636766-66636785 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 66632856 | 66638168 | 66632856 | ID=Msa1118100;Name=Msa1118100 |
| chr7_3 | mRNA | 66632856 | 66638168 | 66632856 | ID=Msa1118100-mRNA-1;Parent=Msa1118100;Name=Msa1118100-mRNA-1;_AED=0.14;_eAED=0.14;_QI=239|1|1|1|0.88|0.8|10|257|318 |
| chr7_3 | exon | 66632856 | 66633064 | 66632856 | ID=Msa1118100-mRNA-1:exon:16171;Parent=Msa1118100-mRNA-1 |
| chr7_3 | exon | 66633492 | 66633659 | 66633492 | ID=Msa1118100-mRNA-1:exon:16172;Parent=Msa1118100-mRNA-1 |
| chr7_3 | exon | 66633756 | 66633858 | 66633756 | ID=Msa1118100-mRNA-1:exon:16173;Parent=Msa1118100-mRNA-1 |
| chr7_3 | exon | 66634816 | 66634928 | 66634816 | ID=Msa1118100-mRNA-1:exon:16174;Parent=Msa1118100-mRNA-1 |
| chr7_3 | exon | 66635643 | 66635711 | 66635643 | ID=Msa1118100-mRNA-1:exon:16175;Parent=Msa1118100-mRNA-1 |
| chr7_3 | exon | 66636210 | 66636325 | 66636210 | ID=Msa1118100-mRNA-1:exon:16176;Parent=Msa1118100-mRNA-1 |
| chr7_3 | exon | 66636776 | 66636830 | 66636776 | ID=Msa1118100-mRNA-1:exon:16177;Parent=Msa1118100-mRNA-1 |
| chr7_3 | exon | 66636922 | 66637042 | 66636922 | ID=Msa1118100-mRNA-1:exon:16178;Parent=Msa1118100-mRNA-1 |
| chr7_3 | exon | 66637574 | 66637716 | 66637574 | ID=Msa1118100-mRNA-1:exon:16179;Parent=Msa1118100-mRNA-1 |
| chr7_3 | exon | 66637813 | 66638168 | 66637813 | ID=Msa1118100-mRNA-1:exon:16180;Parent=Msa1118100-mRNA-1 |
| chr7_3 | five_prime_UTR | 66632856 | 66633064 | 66632856 | ID=Msa1118100-mRNA-1:five_prime_utr;Parent=Msa1118100-mRNA-1 |
| chr7_3 | five_prime_UTR | 66633492 | 66633521 | 66633492 | ID=Msa1118100-mRNA-1:five_prime_utr;Parent=Msa1118100-mRNA-1 |
| chr7_3 | CDS | 66633522 | 66633659 | 66633522 | ID=Msa1118100-mRNA-1:cds;Parent=Msa1118100-mRNA-1 |
| chr7_3 | CDS | 66633756 | 66633858 | 66633756 | ID=Msa1118100-mRNA-1:cds;Parent=Msa1118100-mRNA-1 |
| chr7_3 | CDS | 66634816 | 66634928 | 66634816 | ID=Msa1118100-mRNA-1:cds;Parent=Msa1118100-mRNA-1 |
| chr7_3 | CDS | 66635643 | 66635711 | 66635643 | ID=Msa1118100-mRNA-1:cds;Parent=Msa1118100-mRNA-1 |
| chr7_3 | CDS | 66636210 | 66636325 | 66636210 | ID=Msa1118100-mRNA-1:cds;Parent=Msa1118100-mRNA-1 |
| chr7_3 | CDS | 66636776 | 66636830 | 66636776 | ID=Msa1118100-mRNA-1:cds;Parent=Msa1118100-mRNA-1 |
| chr7_3 | CDS | 66636922 | 66637042 | 66636922 | ID=Msa1118100-mRNA-1:cds;Parent=Msa1118100-mRNA-1 |
| chr7_3 | CDS | 66637574 | 66637716 | 66637574 | ID=Msa1118100-mRNA-1:cds;Parent=Msa1118100-mRNA-1 |
| chr7_3 | CDS | 66637813 | 66637911 | 66637813 | ID=Msa1118100-mRNA-1:cds;Parent=Msa1118100-mRNA-1 |
| chr7_3 | three_prime_UTR | 66637912 | 66638168 | 66637912 | ID=Msa1118100-mRNA-1:three_prime_utr;Parent=Msa1118100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
