Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170000 | XP_003624785.1 | 97.799 | 318 | 7 | 0 | 1 | 318 | 1 | 318 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170000 | sp|Q54YW1|ELMOA_DICDI | 32.308 | 195 | 111 | 3 | 118 | 293 | 362 | 554 | 1.94e-26 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170000 | G7L2P5 | 97.799 | 318 | 7 | 0 | 1 | 318 | 1 | 318 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0187490 | Msa1170000 | 0.800125 | 1.668854e-48 | -8.615850e-47 |
| Msa0322680 | Msa1170000 | 0.806249 | 9.017973e-50 | -8.615850e-47 |
| Msa1118100 | Msa1170000 | 0.900775 | 5.226547e-78 | -8.615850e-47 |
| Msa1170000 | Msa1371240 | 0.804252 | 2.362124e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170000 | MtrunA17_Chr7g0254541 | 97.799 | 318 | 7 | 0 | 1 | 318 | 1 | 318 | 0.0 | 647 |
| Msa1170000 | MtrunA17_Chr4g0022101 | 61.215 | 214 | 82 | 1 | 105 | 317 | 19 | 232 | 3.83e-91 | 271 |
| Msa1170000 | MtrunA17_Chr8g0335681 | 55.328 | 244 | 93 | 3 | 81 | 317 | 26 | 260 | 3.85e-89 | 267 |
| Msa1170000 | MtrunA17_Chr7g0250291 | 54.008 | 237 | 108 | 1 | 81 | 317 | 29 | 264 | 4.91e-82 | 249 |
| Msa1170000 | MtrunA17_Chr3g0122601 | 57.277 | 213 | 90 | 1 | 106 | 317 | 48 | 260 | 2.35e-76 | 234 |
| Msa1170000 | MtrunA17_Chr0c29g0494021 | 53.933 | 89 | 41 | 0 | 229 | 317 | 1 | 89 | 1.05e-23 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170000 | AT3G03610.1 | 70.370 | 324 | 86 | 2 | 1 | 317 | 1 | 321 | 1.62e-170 | 476 |
| Msa1170000 | AT3G03610.3 | 70.370 | 324 | 86 | 2 | 1 | 317 | 1 | 321 | 1.62e-170 | 476 |
| Msa1170000 | AT3G03610.2 | 70.370 | 324 | 86 | 2 | 1 | 317 | 1 | 321 | 1.62e-170 | 476 |
| Msa1170000 | AT3G03610.4 | 70.370 | 324 | 86 | 2 | 1 | 317 | 13 | 333 | 2.04e-170 | 476 |
| Msa1170000 | AT1G03620.12 | 56.863 | 255 | 100 | 4 | 70 | 317 | 44 | 295 | 2.20e-94 | 282 |
| Msa1170000 | AT1G03620.3 | 59.149 | 235 | 91 | 2 | 84 | 317 | 1 | 231 | 2.67e-94 | 279 |
| Msa1170000 | AT1G03620.6 | 59.149 | 235 | 91 | 2 | 84 | 317 | 1 | 231 | 2.67e-94 | 279 |
| Msa1170000 | AT1G03620.2 | 59.149 | 235 | 91 | 2 | 84 | 317 | 1 | 231 | 2.67e-94 | 279 |
| Msa1170000 | AT1G03620.8 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1170000 | AT1G03620.10 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1170000 | AT1G03620.9 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1170000 | AT1G03620.1 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1170000 | AT1G03620.7 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1170000 | AT1G03620.4 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1170000 | AT1G03620.5 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1170000 | AT1G03620.11 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1170000 | AT1G03620.13 | 58.824 | 238 | 93 | 2 | 81 | 317 | 30 | 263 | 3.68e-94 | 280 |
| Msa1170000 | AT3G60260.3 | 57.083 | 240 | 98 | 2 | 80 | 317 | 6 | 242 | 1.50e-91 | 273 |
| Msa1170000 | AT3G60260.2 | 57.500 | 240 | 95 | 3 | 81 | 317 | 29 | 264 | 1.56e-91 | 273 |
| Msa1170000 | AT3G60260.4 | 57.500 | 240 | 95 | 3 | 81 | 317 | 29 | 264 | 1.56e-91 | 273 |
| Msa1170000 | AT3G60260.1 | 57.500 | 240 | 95 | 3 | 81 | 317 | 29 | 264 | 1.56e-91 | 273 |
| Msa1170000 | AT1G67400.1 | 59.615 | 208 | 84 | 0 | 110 | 317 | 73 | 280 | 7.63e-89 | 267 |
| Msa1170000 | AT2G44770.1 | 55.696 | 237 | 104 | 1 | 81 | 317 | 29 | 264 | 8.27e-88 | 264 |
| Msa1170000 | AT3G43400.1 | 62.590 | 139 | 48 | 1 | 152 | 290 | 73 | 207 | 5.11e-55 | 178 |
Find 82 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAGATTATTCTGATATT+TGG | 0.132675 | 7_4:+63084641 | None:intergenic |
| CTAACAAATGCTTAAATAAA+AGG | 0.136455 | 7_4:+63084603 | None:intergenic |
| GAATACTTTACATACATTTA+AGG | 0.163997 | 7_4:+63084715 | None:intergenic |
| CGTTTCACTCGTTGAAATTC+AGG | 0.193695 | 7_4:-63090139 | Msa1170000:intron |
| TTTGCAGCAAACATTGTTCT+AGG | 0.245670 | 7_4:-63088363 | Msa1170000:intron |
| CAGGAACATTTGGATACTTC+TGG | 0.260450 | 7_4:-63089593 | Msa1170000:CDS |
| ACGAGTGAAACGAATCTCTT+TGG | 0.304602 | 7_4:+63090150 | None:intergenic |
| TGCAAAGCGTGCTACATATA+TGG | 0.313380 | 7_4:-63084998 | Msa1170000:CDS |
| TTCATTGAATGAACCGTTGC+TGG | 0.321817 | 7_4:-63089564 | Msa1170000:CDS |
| ATCAGATTGTTGGAAGGAAA+TGG | 0.322781 | 7_4:-63086916 | Msa1170000:CDS |
| CATGTAAATCACAAGTGAAA+TGG | 0.357229 | 7_4:-63084669 | Msa1170000:three_prime_UTR |
| ATGTAAATCACAAGTGAAAT+GGG | 0.362888 | 7_4:-63084668 | Msa1170000:three_prime_UTR |
| TGGAAAACGGCAGGAACATT+TGG | 0.377212 | 7_4:-63089603 | Msa1170000:CDS |
| ACCATGGTTTGCAGGGGTGG+AGG | 0.391694 | 7_4:-63086423 | Msa1170000:intron |
| CTCCACTTAAATCAGATTGT+TGG | 0.392141 | 7_4:-63086926 | Msa1170000:CDS |
| CGGCTTGAAGTTCCCTTTGA+CGG | 0.402080 | 7_4:-63087502 | Msa1170000:CDS |
| TAACAAATGCTTAAATAAAA+GGG | 0.404789 | 7_4:+63084604 | None:intergenic |
| GCAAACATTGTTCTAGGGTC+TGG | 0.406999 | 7_4:-63088357 | Msa1170000:CDS |
| TTCGAACCTCATTGCGCAAT+GGG | 0.413507 | 7_4:-63089348 | Msa1170000:CDS |
| CCATGGTTTGCAGGGGTGGA+GGG | 0.415346 | 7_4:-63086422 | Msa1170000:intron |
| CTCCATCACGGGGATGTTGA+TGG | 0.416468 | 7_4:-63089623 | Msa1170000:CDS |
| GAAAGAAGGCACAAATTCAT+TGG | 0.422747 | 7_4:-63089382 | Msa1170000:CDS |
| TTGATTCCAGCTACTGCAAA+TGG | 0.423995 | 7_4:+63085705 | None:intergenic |
| ATTTATGTTGGTGCAGATGC+TGG | 0.425464 | 7_4:-63085676 | Msa1170000:CDS |
| ATACTATAATTCTTTACTAT+AGG | 0.425884 | 7_4:+63089675 | None:intergenic |
| TTGCATTGCCTTTCAAATGA+TGG | 0.429352 | 7_4:-63085034 | Msa1170000:CDS |
| ACACACCTAAAATCTGTTGA+TGG | 0.432758 | 7_4:+63086876 | None:intergenic |
| TCAGATTGTTGGAAGGAAAT+GGG | 0.433239 | 7_4:-63086915 | Msa1170000:CDS |
| TTCCAACAATCTGATTTAAG+TGG | 0.437679 | 7_4:+63086924 | None:intergenic |
| GCGCAATGGGCACAGTGGTT+AGG | 0.448913 | 7_4:-63089335 | Msa1170000:intron |
| GTTGTTCCATCTTCTTCGTC+GGG | 0.460134 | 7_4:-63085111 | Msa1170000:CDS |
| ATCTCTATACATACCTGCAC+AGG | 0.463215 | 7_4:+63088252 | None:intergenic |
| AGTTGTTCCATCTTCTTCGT+CGG | 0.478166 | 7_4:-63085112 | Msa1170000:CDS |
| GCTGCTTGAGGAGGATGAAA+TGG | 0.495909 | 7_4:-63085073 | Msa1170000:CDS |
| CAGATGCTGGATCTTCAATC+AGG | 0.501555 | 7_4:-63085663 | Msa1170000:intron |
| TATGTACACTTGAAGATTTG+TGG | 0.503025 | 7_4:-63089415 | Msa1170000:CDS |
| GAATATCCATTTGCAGTAGC+TGG | 0.503288 | 7_4:-63085711 | Msa1170000:CDS |
| CATATTCCCGACGAAGAAGA+TGG | 0.508986 | 7_4:+63085105 | None:intergenic |
| CTCCAGTATAAAAGATATAC+CGG | 0.509227 | 7_4:-63084815 | Msa1170000:CDS |
| ACGGGGATGTTGATGGAAAA+CGG | 0.512494 | 7_4:-63089616 | Msa1170000:CDS |
| TTGCAGCAAACATTGTTCTA+GGG | 0.514573 | 7_4:-63088362 | Msa1170000:intron |
| AGTGGAGGAAGCTCTCGGTC+AGG | 0.522963 | 7_4:+63086942 | None:intergenic |
| AATCAATATCTCATTTATGT+TGG | 0.524266 | 7_4:-63085688 | Msa1170000:CDS |
| TCCAACACTTAGCCCTGTGC+AGG | 0.527434 | 7_4:-63088265 | Msa1170000:intron |
| CAACAATCTGATTTAAGTGG+AGG | 0.536607 | 7_4:+63086927 | None:intergenic |
| TTCCATCAACATCCCCGTGA+TGG | 0.537689 | 7_4:+63089621 | None:intergenic |
| TGCACAGGGCTAAGTGTTGG+AGG | 0.541071 | 7_4:+63088267 | None:intergenic |
| TTTCGAACCTCATTGCGCAA+TGG | 0.542371 | 7_4:-63089349 | Msa1170000:CDS |
| AACAGCTCAAACGTGTGCTG+TGG | 0.546422 | 7_4:+63090327 | None:intergenic |
| CGATTATTGCACAAACAAGA+TGG | 0.547169 | 7_4:-63085750 | Msa1170000:CDS |
| ACCTGCACAGGGCTAAGTGT+TGG | 0.548439 | 7_4:+63088264 | None:intergenic |
| ATGGATATTCCCACTCTGCT+CGG | 0.549193 | 7_4:+63085724 | None:intergenic |
| ATGTACACTTGAAGATTTGT+GGG | 0.552958 | 7_4:-63089414 | Msa1170000:CDS |
| TTACTTGCAAAACAATAGGA+TGG | 0.554335 | 7_4:-63088292 | Msa1170000:CDS |
| CACACCTAAAATCTGTTGAT+GGG | 0.557506 | 7_4:+63086877 | None:intergenic |
| TGAGGAGAAGACTCCATCAC+GGG | 0.558881 | 7_4:-63089634 | Msa1170000:CDS |
| CATCTCAACATGTTGTGAGC+CGG | 0.561847 | 7_4:+63084796 | None:intergenic |
| TCATTGAATGAACCGTTGCT+GGG | 0.564464 | 7_4:-63089563 | Msa1170000:CDS |
| CTGAGCATCCATCATTTGAA+AGG | 0.566308 | 7_4:+63085026 | None:intergenic |
| GACTAAGAAACTTAAAGCAA+CGG | 0.573979 | 7_4:-63087522 | Msa1170000:CDS |
| GGATGTTGATGGAAAACGGC+AGG | 0.580921 | 7_4:-63089612 | Msa1170000:CDS |
| TGGAAGGAAATGGGATGGCA+AGG | 0.585634 | 7_4:-63086906 | Msa1170000:CDS |
| AAAATAAAGAAATAAATGAA+AGG | 0.593271 | 7_4:+63090275 | None:intergenic |
| GTGGGATGATGAGAGAAAGA+AGG | 0.593292 | 7_4:-63089396 | Msa1170000:CDS |
| ACAGCTCAAACGTGTGCTGT+GGG | 0.595203 | 7_4:+63090328 | None:intergenic |
| AACAAATGCTTAAATAAAAG+GGG | 0.595384 | 7_4:+63084605 | None:intergenic |
| TGATTATATTGAGAGTAAGA+AGG | 0.599715 | 7_4:-63089534 | Msa1170000:intron |
| ATTTAAGTGGAGGAAGCTCT+CGG | 0.606705 | 7_4:+63086937 | None:intergenic |
| ACTTAAATCAGATTGTTGGA+AGG | 0.607130 | 7_4:-63086922 | Msa1170000:CDS |
| AGATGGAATCCGAGCAGAGT+GGG | 0.614159 | 7_4:-63085733 | Msa1170000:CDS |
| TGTAAATCACAAGTGAAATG+GGG | 0.618313 | 7_4:-63084667 | Msa1170000:three_prime_UTR |
| TAATCATCACCTCCCAGCAA+CGG | 0.628970 | 7_4:+63089551 | None:intergenic |
| TTCAAATGATGGATGCTCAG+TGG | 0.634607 | 7_4:-63085023 | Msa1170000:CDS |
| ACTGTGCCCATTGCGCAATG+AGG | 0.645478 | 7_4:+63089342 | None:intergenic |
| ATTGTTGGAAGGAAATGGGA+TGG | 0.650850 | 7_4:-63086911 | Msa1170000:CDS |
| GTAAATCACAAGTGAAATGG+GGG | 0.654503 | 7_4:-63084666 | Msa1170000:three_prime_UTR |
| TTGAGGAGAAGACTCCATCA+CGG | 0.656992 | 7_4:-63089635 | Msa1170000:CDS |
| TCTCTATACATACCTGCACA+GGG | 0.703300 | 7_4:+63088253 | None:intergenic |
| GAGGAGAAGACTCCATCACG+GGG | 0.729277 | 7_4:-63089633 | Msa1170000:CDS |
| AAGATGGAATCCGAGCAGAG+TGG | 0.735731 | 7_4:-63085734 | Msa1170000:CDS |
| TCATTGCGCAATGGGCACAG+TGG | 0.737416 | 7_4:-63089340 | Msa1170000:CDS |
| TTGAATGAACCGTTGCTGGG+AGG | 0.740209 | 7_4:-63089560 | Msa1170000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAGAAATAAATGAA+AGG | + | chr7_4:63084592-63084611 | None:intergenic | 10.0% |
| !!! | TAATAAGATAATAATTTTTC+GGG | - | chr7_4:63088655-63088674 | Msa1170000:intron | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | + | chr7_4:63088703-63088722 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | + | chr7_4:63088704-63088723 | None:intergenic | 10.0% |
| !!! | AATAACTGAATTTTTCAAAA+GGG | + | chr7_4:63084872-63084891 | None:intergenic | 15.0% |
| !!! | AAATAACTGAATTTTTCAAA+AGG | + | chr7_4:63084873-63084892 | None:intergenic | 15.0% |
| !! | ATACTATAATTCTTTACTAT+AGG | + | chr7_4:63085192-63085211 | None:intergenic | 15.0% |
| !! | TAAGAATTGAATAAAAATCA+TGG | + | chr7_4:63086329-63086348 | None:intergenic | 15.0% |
| !! | ATATATATAAAGACAAATGT+CGG | + | chr7_4:63087442-63087461 | None:intergenic | 15.0% |
| !!! | TATTTTTAATATCTGAATTG+TGG | - | chr7_4:63087645-63087664 | Msa1170000:intron | 15.0% |
| !!! | ATTTTTAATATCTGAATTGT+GGG | - | chr7_4:63087646-63087665 | Msa1170000:intron | 15.0% |
| !!! | TGTTTAATTGTTTTACTTTA+AGG | - | chr7_4:63088008-63088027 | Msa1170000:intron | 15.0% |
| !! | AAACTCTTTAAATTAATACT+CGG | - | chr7_4:63088551-63088570 | Msa1170000:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | - | chr7_4:63088589-63088608 | Msa1170000:intron | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | + | chr7_4:63088627-63088646 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCAC+TGG | - | chr7_4:63088988-63089007 | Msa1170000:intron | 15.0% |
| !! | CTCTATAAATTAATAATGTT+AGG | + | chr7_4:63089015-63089034 | None:intergenic | 15.0% |
| !! | AGTAATATTAAATGTATCTT+AGG | + | chr7_4:63089635-63089654 | None:intergenic | 15.0% |
| !!! | AAAATTTTGCTATTTTCTTT+AGG | - | chr7_4:63089971-63089990 | Msa1170000:intron | 15.0% |
| !! | TAACAAATGCTTAAATAAAA+GGG | + | chr7_4:63090263-63090282 | None:intergenic | 15.0% |
| !! | GAAGTAACAAACAAAAATTA+GGG | + | chr7_4:63084687-63084706 | None:intergenic | 20.0% |
| !! | TTCAAATCAAGAAAAACAAA+GGG | + | chr7_4:63084763-63084782 | None:intergenic | 20.0% |
| !! | ATTCAAATCAAGAAAAACAA+AGG | + | chr7_4:63084764-63084783 | None:intergenic | 20.0% |
| !!! | GTTTTTCTTGATTTGAATTT+CGG | - | chr7_4:63084766-63084785 | Msa1170000:three_prime_UTR | 20.0% |
| !! | AATTTATTGAGTAATTGAAG+AGG | - | chr7_4:63084918-63084937 | Msa1170000:intron | 20.0% |
| !! | AAACTAACTGAATTTCAAAA+GGG | + | chr7_4:63084945-63084964 | None:intergenic | 20.0% |
| !! | TGTTTATCAAAATCTGAAAA+TGG | - | chr7_4:63085004-63085023 | Msa1170000:CDS | 20.0% |
| !!! | AATTGTCGTTATTTTGTATT+TGG | - | chr7_4:63085358-63085377 | Msa1170000:intron | 20.0% |
| !!! | TTTTCCGTTAGTAATAATTA+TGG | - | chr7_4:63085705-63085724 | Msa1170000:CDS | 20.0% |
| !! | TATTAGTGTACTACATATTA+GGG | - | chr7_4:63085975-63085994 | Msa1170000:intron | 20.0% |
| !! | TCAAAATGACAAAAAAATTG+TGG | + | chr7_4:63086216-63086235 | None:intergenic | 20.0% |
| !! | AAATAAGAAGAAAATGCAAA+TGG | - | chr7_4:63086427-63086446 | Msa1170000:intron | 20.0% |
| !! | GTTAAACTTAAAGTTGAAAT+TGG | + | chr7_4:63086683-63086702 | None:intergenic | 20.0% |
| !!! | ATTTAGATCAATTGCATTTT+CGG | + | chr7_4:63086711-63086730 | None:intergenic | 20.0% |
| !!! | ATATCATTTTCAAAAGACAA+AGG | + | chr7_4:63086803-63086822 | None:intergenic | 20.0% |
| !!! | GGAATTTGATGATATATATT+TGG | - | chr7_4:63086974-63086993 | Msa1170000:CDS | 20.0% |
| !! | TCTTTGATTATAAATATCAC+AGG | + | chr7_4:63087078-63087097 | None:intergenic | 20.0% |
| !!! | GAACAATCAATTTTAAATTG+TGG | - | chr7_4:63087106-63087125 | Msa1170000:intron | 20.0% |
| !! | TATTTCTTTCTTTCTTTCTT+AGG | - | chr7_4:63087313-63087332 | Msa1170000:intron | 20.0% |
| !! | AAATGCATTAAATACATACT+TGG | + | chr7_4:63087403-63087422 | None:intergenic | 20.0% |
| !!! | TTTATTTATTTCTTTGTTGC+AGG | - | chr7_4:63087867-63087886 | Msa1170000:intron | 20.0% |
| !!! | ATAAGGTTTTATTCAGTTAT+AGG | - | chr7_4:63088055-63088074 | Msa1170000:intron | 20.0% |
| !!! | AAGTATTCTTTAGAAATACT+TGG | - | chr7_4:63088276-63088295 | Msa1170000:CDS | 20.0% |
| !! | TAATTTCAAAAAAACAGAGT+TGG | + | chr7_4:63088400-63088419 | None:intergenic | 20.0% |
| !!! | ACTCTGTTTTTTTGAAATTA+TGG | - | chr7_4:63088400-63088419 | Msa1170000:intron | 20.0% |
| !! | AATCAATATCTCATTTATGT+TGG | - | chr7_4:63089176-63089195 | Msa1170000:intron | 20.0% |
| !!! | GCATTATTATGTTTTTAGAT+TGG | + | chr7_4:63089374-63089393 | None:intergenic | 20.0% |
| !! | TACATTTAATATTACTGTAG+CGG | - | chr7_4:63089639-63089658 | Msa1170000:CDS | 20.0% |
| !!! | AACATTTTCTAACTACAAAA+TGG | + | chr7_4:63090128-63090147 | None:intergenic | 20.0% |
| !! | GAATACTTTACATACATTTA+AGG | + | chr7_4:63090152-63090171 | None:intergenic | 20.0% |
| !! | AACAAATGCTTAAATAAAAG+GGG | + | chr7_4:63090262-63090281 | None:intergenic | 20.0% |
| !! | CTAACAAATGCTTAAATAAA+AGG | + | chr7_4:63090264-63090283 | None:intergenic | 20.0% |
| ! | CGAAGTAACAAACAAAAATT+AGG | + | chr7_4:63084688-63084707 | None:intergenic | 25.0% |
| ! | GATTTGAATTTCGGTTTATT+CGG | - | chr7_4:63084775-63084794 | Msa1170000:three_prime_UTR | 25.0% |
| ! | GGTTAAATTTGTCAACTTTA+GGG | - | chr7_4:63084826-63084845 | Msa1170000:CDS | 25.0% |
| ! | CAAACTAACTGAATTTCAAA+AGG | + | chr7_4:63084946-63084965 | None:intergenic | 25.0% |
| ! | ATATATATTACAGTGTTAGC+TGG | - | chr7_4:63085056-63085075 | Msa1170000:CDS | 25.0% |
| !!! | TGTATTTTTTTGACTCGTAT+AGG | - | chr7_4:63085162-63085181 | Msa1170000:intron | 25.0% |
| ! | TGATTATATTGAGAGTAAGA+AGG | - | chr7_4:63085330-63085349 | Msa1170000:intron | 25.0% |
| ! | ACTGTCAAGCATAAATTTAT+AGG | + | chr7_4:63085578-63085597 | None:intergenic | 25.0% |
| ! | TAGTGAAAAACAATGTTAGA+CGG | - | chr7_4:63085640-63085659 | Msa1170000:intron | 25.0% |
| ! | AAAAGAATCATTCTTAGGAT+TGG | - | chr7_4:63085834-63085853 | Msa1170000:intron | 25.0% |
| ! | GTATTAGTGTACTACATATT+AGG | - | chr7_4:63085974-63085993 | Msa1170000:intron | 25.0% |
| !!! | ATTGTTTTGCAAGTAAAAAC+CGG | + | chr7_4:63086568-63086587 | None:intergenic | 25.0% |
| !! | GTTTTTACTTGCAAAACAAT+AGG | - | chr7_4:63086568-63086587 | Msa1170000:intron | 25.0% |
| !!! | AACACTTACTTGATAATGAT+AGG | - | chr7_4:63086856-63086875 | Msa1170000:intron | 25.0% |
| ! | TAATGATAGGATATTATCAC+TGG | - | chr7_4:63086869-63086888 | Msa1170000:intron | 25.0% |
| !! | GAAAACAACGAGTAATTTTA+TGG | + | chr7_4:63087016-63087035 | None:intergenic | 25.0% |
| ! | TATAACAAAATGGTATCAAG+AGG | + | chr7_4:63087562-63087581 | None:intergenic | 25.0% |
| !! | GACATGTATAGCAATTTTAT+TGG | + | chr7_4:63087728-63087747 | None:intergenic | 25.0% |
| !!! | ATTGTTTTACTTTAAGGAGA+TGG | - | chr7_4:63088014-63088033 | Msa1170000:intron | 25.0% |
| !!! | TTGTTTTACTTTAAGGAGAT+GGG | - | chr7_4:63088015-63088034 | Msa1170000:intron | 25.0% |
| ! | ATAAAACCTTATCCATATTC+AGG | + | chr7_4:63088047-63088066 | None:intergenic | 25.0% |
| !!! | AGGATTCATTGACTTAATAA+TGG | - | chr7_4:63088110-63088129 | Msa1170000:intron | 25.0% |
| !!! | GGATTCATTGACTTAATAAT+GGG | - | chr7_4:63088111-63088130 | Msa1170000:intron | 25.0% |
| ! | GAATACTTGTGACATATATA+AGG | + | chr7_4:63088264-63088283 | None:intergenic | 25.0% |
| ! | CTAAAAGTTTCATCAAACTT+CGG | - | chr7_4:63088360-63088379 | Msa1170000:intron | 25.0% |
| !!! | CTGTTTTTTTGAAATTATGG+AGG | - | chr7_4:63088403-63088422 | Msa1170000:intron | 25.0% |
| ! | TGTACATACAAATGCAAATA+CGG | + | chr7_4:63088527-63088546 | None:intergenic | 25.0% |
| ! | TATGTACATACCAAACAAAA+AGG | + | chr7_4:63088908-63088927 | None:intergenic | 25.0% |
| !! | TTTGAACCATTATTTTCACT+CGG | + | chr7_4:63089397-63089416 | None:intergenic | 25.0% |
| ! | AATAATGGTTCAAATCAAGT+TGG | - | chr7_4:63089403-63089422 | Msa1170000:CDS | 25.0% |
| ! | CCAAACATAATAAATGAATG+TGG | + | chr7_4:63089479-63089498 | None:intergenic | 25.0% |
| ! | CCACATTCATTTATTATGTT+TGG | - | chr7_4:63089476-63089495 | Msa1170000:intron | 25.0% |
| ! | ATCAACAATTGCTGAAAATA+AGG | + | chr7_4:63089671-63089690 | None:intergenic | 25.0% |
| !! | GATTTTACATGAAAAATGAG+AGG | + | chr7_4:63089708-63089727 | None:intergenic | 25.0% |
| ! | ATTAAACTGTGTTTGTTCAT+TGG | - | chr7_4:63089902-63089921 | Msa1170000:intron | 25.0% |
| ! | TTATTAGCATTATTCTGTGA+TGG | - | chr7_4:63089934-63089953 | Msa1170000:intron | 25.0% |
| !!! | TGCTCATTTTAGTTTAACAT+TGG | - | chr7_4:63090096-63090115 | Msa1170000:intron | 25.0% |
| ! | ATGTAAATCACAAGTGAAAT+GGG | - | chr7_4:63090196-63090215 | Msa1170000:five_prime_UTR | 25.0% |
| ! | CAGAAGATTATTCTGATATT+TGG | + | chr7_4:63090226-63090245 | None:intergenic | 25.0% |
| GGGTTAAATTTGTCAACTTT+AGG | - | chr7_4:63084825-63084844 | Msa1170000:CDS | 30.0% | |
| TTGATAAACACCAAACCATA+GGG | + | chr7_4:63084994-63085013 | None:intergenic | 30.0% | |
| TTTGATAAACACCAAACCAT+AGG | + | chr7_4:63084995-63085014 | None:intergenic | 30.0% | |
| ! | TTCTTGAACTTGATGGTTAT+GGG | - | chr7_4:63085128-63085147 | Msa1170000:intron | 30.0% |
| TGATGTCTTCAAAAACATTG+AGG | - | chr7_4:63085212-63085231 | Msa1170000:intron | 30.0% | |
| !! | TGTCGTTATTTTGTATTTGG+AGG | - | chr7_4:63085361-63085380 | Msa1170000:intron | 30.0% |
| !! | GTCGTTATTTTGTATTTGGA+GGG | - | chr7_4:63085362-63085381 | Msa1170000:intron | 30.0% |
| TATGTACACTTGAAGATTTG+TGG | - | chr7_4:63085449-63085468 | Msa1170000:intron | 30.0% | |
| ATGTACACTTGAAGATTTGT+GGG | - | chr7_4:63085450-63085469 | Msa1170000:intron | 30.0% | |
| CGCTCCATAATTATTACTAA+CGG | + | chr7_4:63085712-63085731 | None:intergenic | 30.0% | |
| CGAATAAAATCCTATTCCAA+TGG | - | chr7_4:63085730-63085749 | Msa1170000:CDS | 30.0% | |
| CTGCTAAAAGAATCATTCTT+AGG | - | chr7_4:63085829-63085848 | Msa1170000:intron | 30.0% | |
| ! | AATTGGCACTGAATTTAATG+AGG | - | chr7_4:63085926-63085945 | Msa1170000:intron | 30.0% |
| ATTAGGGTTGAATCTCATTA+AGG | - | chr7_4:63085991-63086010 | Msa1170000:intron | 30.0% | |
| ! | TGCAGCAATTCATATTGATT+GGG | + | chr7_4:63086106-63086125 | None:intergenic | 30.0% |
| ATGCAGCAATTCATATTGAT+TGG | + | chr7_4:63086107-63086126 | None:intergenic | 30.0% | |
| AATGACAAAAAAATTGTGGC+TGG | + | chr7_4:63086212-63086231 | None:intergenic | 30.0% | |
| TTTCACAAGCTACATAAATG+AGG | + | chr7_4:63086355-63086374 | None:intergenic | 30.0% | |
| ! | TATGTAGCTTGTGAAAAATC+CGG | - | chr7_4:63086359-63086378 | Msa1170000:intron | 30.0% |
| ! | CTATTTTCTTCATTGTTGAC+TGG | - | chr7_4:63086399-63086418 | Msa1170000:CDS | 30.0% |
| TTACTTGCAAAACAATAGGA+TGG | - | chr7_4:63086572-63086591 | Msa1170000:intron | 30.0% | |
| ! | GTTGAAATTGGTTCCTTAAT+TGG | + | chr7_4:63086671-63086690 | None:intergenic | 30.0% |
| ! | ATCAATTGCATTTTCGGATA+GGG | + | chr7_4:63086705-63086724 | None:intergenic | 30.0% |
| ! | CATTTTCAAAAGACAAAGGA+TGG | + | chr7_4:63086799-63086818 | None:intergenic | 30.0% |
| CACGTGATCTTTAGTTAAAA+AGG | + | chr7_4:63087041-63087060 | None:intergenic | 30.0% | |
| AATATGACATAACCACATGT+AGG | + | chr7_4:63087287-63087306 | None:intergenic | 30.0% | |
| GACTAAGAAACTTAAAGCAA+CGG | - | chr7_4:63087342-63087361 | Msa1170000:intron | 30.0% | |
| AAATGTCGGTAATGTGATTA+GGG | + | chr7_4:63087428-63087447 | None:intergenic | 30.0% | |
| ! | AGAGCATCACTATAACAAAA+TGG | + | chr7_4:63087572-63087591 | None:intergenic | 30.0% |
| TAATATCTGAATTGTGGGTA+TGG | - | chr7_4:63087651-63087670 | Msa1170000:intron | 30.0% | |
| AATATCTGAATTGTGGGTAT+GGG | - | chr7_4:63087652-63087671 | Msa1170000:intron | 30.0% | |
| TGGGGTTGTCAATTTATAAA+TGG | - | chr7_4:63087671-63087690 | Msa1170000:intron | 30.0% | |
| ! | TCTTTTACAACTGTGGAAAT+TGG | - | chr7_4:63087894-63087913 | Msa1170000:intron | 30.0% |
| TTCCAACAATCTGATTTAAG+TGG | + | chr7_4:63087943-63087962 | None:intergenic | 30.0% | |
| ACTTAAATCAGATTGTTGGA+AGG | - | chr7_4:63087942-63087961 | Msa1170000:intron | 30.0% | |
| !! | TGTTTTACTTTAAGGAGATG+GGG | - | chr7_4:63088016-63088035 | Msa1170000:intron | 30.0% |
| TACTGTAAGACCATTAAGTA+AGG | - | chr7_4:63088090-63088109 | Msa1170000:intron | 30.0% | |
| GTCAATGAATCCTTACTTAA+TGG | + | chr7_4:63088103-63088122 | None:intergenic | 30.0% | |
| !! | TTCATTGACTTAATAATGGG+AGG | - | chr7_4:63088114-63088133 | Msa1170000:intron | 30.0% |
| GATGTATGTCAAACCTATAA+GGG | + | chr7_4:63088158-63088177 | None:intergenic | 30.0% | |
| AGATGTATGTCAAACCTATA+AGG | + | chr7_4:63088159-63088178 | None:intergenic | 30.0% | |
| ACATACATCTACTTGTTTGA+TGG | - | chr7_4:63088169-63088188 | Msa1170000:intron | 30.0% | |
| !! | CTTGTTTGATGGTTTGATTT+TGG | - | chr7_4:63088180-63088199 | Msa1170000:intron | 30.0% |
| !!! | TGGTTTGATTTTGGTTCTTT+AGG | - | chr7_4:63088189-63088208 | Msa1170000:intron | 30.0% |
| !!! | GGTTTGATTTTGGTTCTTTA+GGG | - | chr7_4:63088190-63088209 | Msa1170000:intron | 30.0% |
| !!! | GTTTGATTTTGGTTCTTTAG+GGG | - | chr7_4:63088191-63088210 | Msa1170000:intron | 30.0% |
| GACATATATAAGGTACATGT+GGG | + | chr7_4:63088254-63088273 | None:intergenic | 30.0% | |
| TGACATATATAAGGTACATG+TGG | + | chr7_4:63088255-63088274 | None:intergenic | 30.0% | |
| ! | AGTCTTTATAAAGAGTATGC+AGG | + | chr7_4:63088338-63088357 | None:intergenic | 30.0% |
| ! | GGAGATCCCTTTATAATTTT+CGG | - | chr7_4:63088676-63088695 | Msa1170000:intron | 30.0% |
| TTGGGACCGAAAATTATAAA+GGG | + | chr7_4:63088685-63088704 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | + | chr7_4:63088777-63088796 | None:intergenic | 30.0% | |
| ACTACTGTGTTCATATACAT+TGG | + | chr7_4:63088821-63088840 | None:intergenic | 30.0% | |
| !! | GACTAATTTGCCTTTTTGTT+TGG | - | chr7_4:63088895-63088914 | Msa1170000:intron | 30.0% |
| AATTCTCTCAAGAAATTCAG+TGG | - | chr7_4:63089231-63089250 | Msa1170000:intron | 30.0% | |
| ! | TTGAACCATTATTTTCACTC+GGG | + | chr7_4:63089396-63089415 | None:intergenic | 30.0% |
| CTCCAGTATAAAAGATATAC+CGG | - | chr7_4:63090049-63090068 | Msa1170000:intron | 30.0% | |
| CATGTAAATCACAAGTGAAA+TGG | - | chr7_4:63090195-63090214 | Msa1170000:five_prime_UTR | 30.0% | |
| TGTAAATCACAAGTGAAATG+GGG | - | chr7_4:63090197-63090216 | Msa1170000:five_prime_UTR | 30.0% | |
| ! | TACACTTTTCGTGCTTGATA+AGG | + | chr7_4:63084629-63084648 | None:intergenic | 35.0% |
| GAATTTCGGTTTATTCGGTT+TGG | - | chr7_4:63084780-63084799 | Msa1170000:exon | 35.0% | |
| TTTCAGTTGAGAGGTGAAAA+TGG | - | chr7_4:63084803-63084822 | Msa1170000:CDS | 35.0% | |
| TTCAGTTGAGAGGTGAAAAT+GGG | - | chr7_4:63084804-63084823 | Msa1170000:CDS | 35.0% | |
| !! | TGTTGATTTGAGTAACCCTA+TGG | - | chr7_4:63084976-63084995 | Msa1170000:intron | 35.0% |
| ATTTGAGTAACCCTATGGTT+TGG | - | chr7_4:63084981-63085000 | Msa1170000:intron | 35.0% | |
| GGAGTGATGAATGAAAAGAA+TGG | - | chr7_4:63085077-63085096 | Msa1170000:CDS | 35.0% | |
| GATGATGTTCTTGAACTTGA+TGG | - | chr7_4:63085121-63085140 | Msa1170000:intron | 35.0% | |
| ! | GTTCTTGAACTTGATGGTTA+TGG | - | chr7_4:63085127-63085146 | Msa1170000:intron | 35.0% |
| ! | GAAAGAAGGCACAAATTCAT+TGG | - | chr7_4:63085482-63085501 | Msa1170000:intron | 35.0% |
| AGGTATGTTTACGATTGAGT+TGG | - | chr7_4:63085549-63085568 | Msa1170000:intron | 35.0% | |
| TAGTTCATACGTTCTATGCT+TGG | - | chr7_4:63085668-63085687 | Msa1170000:CDS | 35.0% | |
| CGTAAGACTTCAGATTCATA+GGG | + | chr7_4:63085799-63085818 | None:intergenic | 35.0% | |
| ACGTAAGACTTCAGATTCAT+AGG | + | chr7_4:63085800-63085819 | None:intergenic | 35.0% | |
| GTATTAGTGGAGTGAATTGA+TGG | - | chr7_4:63085888-63085907 | Msa1170000:intron | 35.0% | |
| ! | GGCTGGCTATACAAAATTTA+GGG | + | chr7_4:63086195-63086214 | None:intergenic | 35.0% |
| ! | TGGCTGGCTATACAAAATTT+AGG | + | chr7_4:63086196-63086215 | None:intergenic | 35.0% |
| ! | ATGTAGCTTGTGAAAAATCC+GGG | - | chr7_4:63086360-63086379 | Msa1170000:intron | 35.0% |
| AGAGATATATACGTAAGACC+CGG | + | chr7_4:63086381-63086400 | None:intergenic | 35.0% | |
| ! | TAGAACAATGTTTGCTGCAA+AGG | + | chr7_4:63086502-63086521 | None:intergenic | 35.0% |
| TTTGCAGCAAACATTGTTCT+AGG | - | chr7_4:63086501-63086520 | Msa1170000:intron | 35.0% | |
| TTGCAGCAAACATTGTTCTA+GGG | - | chr7_4:63086502-63086521 | Msa1170000:intron | 35.0% | |
| !! | AAGCTCGTTTTAGCCAATTA+AGG | - | chr7_4:63086655-63086674 | Msa1170000:intron | 35.0% |
| ! | GATCAATTGCATTTTCGGAT+AGG | + | chr7_4:63086706-63086725 | None:intergenic | 35.0% |
| ! | TGTGATGGAGTTCAATTCAA+AGG | + | chr7_4:63086763-63086782 | None:intergenic | 35.0% |
| TTTGAAAATGATATGCTGCC+AGG | - | chr7_4:63086809-63086828 | Msa1170000:intron | 35.0% | |
| TTGAAAATGATATGCTGCCA+GGG | - | chr7_4:63086810-63086829 | Msa1170000:intron | 35.0% | |
| ATCACAAATCAGAATATCCC+TGG | + | chr7_4:63086830-63086849 | None:intergenic | 35.0% | |
| ! | TACCTCACTGTATTGTGTTT+TGG | - | chr7_4:63086921-63086940 | Msa1170000:CDS | 35.0% |
| TTCCAAAACACAATACAGTG+AGG | + | chr7_4:63086926-63086945 | None:intergenic | 35.0% | |
| !! | TCACTGTATTGTGTTTTGGA+AGG | - | chr7_4:63086925-63086944 | Msa1170000:CDS | 35.0% |
| !! | GTGGGTAATGGATATTTCTT+TGG | - | chr7_4:63086953-63086972 | Msa1170000:CDS | 35.0% |
| ! | AACTTCTGTAGTCTCTTTTG+TGG | - | chr7_4:63087227-63087246 | Msa1170000:intron | 35.0% |
| TCTCAATAATCTCCTACATG+TGG | - | chr7_4:63087272-63087291 | Msa1170000:intron | 35.0% | |
| !!! | TCTGTTTTAGAACCGTCAAA+GGG | + | chr7_4:63087377-63087396 | None:intergenic | 35.0% |
| !!! | ATCTGTTTTAGAACCGTCAA+AGG | + | chr7_4:63087378-63087397 | None:intergenic | 35.0% |
| CAAATGTCGGTAATGTGATT+AGG | + | chr7_4:63087429-63087448 | None:intergenic | 35.0% | |
| ATATCTGAATTGTGGGTATG+GGG | - | chr7_4:63087653-63087672 | Msa1170000:intron | 35.0% | |
| ATAAATGGAATGTCCTTCCA+TGG | - | chr7_4:63087686-63087705 | Msa1170000:intron | 35.0% | |
| CCTTTAAATTCATCCATGGA+AGG | + | chr7_4:63087702-63087721 | None:intergenic | 35.0% | |
| CCTTCCATGGATGAATTTAA+AGG | - | chr7_4:63087699-63087718 | Msa1170000:intron | 35.0% | |
| GTCACCTTTAAATTCATCCA+TGG | + | chr7_4:63087706-63087725 | None:intergenic | 35.0% | |
| CAACAATCTGATTTAAGTGG+AGG | + | chr7_4:63087940-63087959 | None:intergenic | 35.0% | |
| CTCCACTTAAATCAGATTGT+TGG | - | chr7_4:63087938-63087957 | Msa1170000:intron | 35.0% | |
| ATCAGATTGTTGGAAGGAAA+TGG | - | chr7_4:63087948-63087967 | Msa1170000:intron | 35.0% | |
| TCAGATTGTTGGAAGGAAAT+GGG | - | chr7_4:63087949-63087968 | Msa1170000:intron | 35.0% | |
| CACACCTAAAATCTGTTGAT+GGG | + | chr7_4:63087990-63088009 | None:intergenic | 35.0% | |
| ACACACCTAAAATCTGTTGA+TGG | + | chr7_4:63087991-63088010 | None:intergenic | 35.0% | |
| CAAAATAGTCTGACCCTTAT+AGG | - | chr7_4:63088142-63088161 | Msa1170000:intron | 35.0% | |
| ATACGGTAGAAGAAACTTAC+TGG | + | chr7_4:63088510-63088529 | None:intergenic | 35.0% | |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | + | chr7_4:63088617-63088636 | None:intergenic | 35.0% |
| CTTGGGACCGAAAATTATAA+AGG | + | chr7_4:63088686-63088705 | None:intergenic | 35.0% | |
| CTAATTTACGTTGAGTCTCA+AGG | - | chr7_4:63088843-63088862 | Msa1170000:intron | 35.0% | |
| CGATTATTGCACAAACAAGA+TGG | - | chr7_4:63089114-63089133 | Msa1170000:intron | 35.0% | |
| TAATGCCCGAGTGAAAATAA+TGG | - | chr7_4:63089388-63089407 | Msa1170000:CDS | 35.0% | |
| AGGGAACTGTATAGATAGTT+TGG | - | chr7_4:63089539-63089558 | Msa1170000:CDS | 35.0% | |
| GGGAACTGTATAGATAGTTT+GGG | - | chr7_4:63089540-63089559 | Msa1170000:CDS | 35.0% | |
| TTGCATTGCCTTTCAAATGA+TGG | - | chr7_4:63089830-63089849 | Msa1170000:intron | 35.0% | |
| ! | CGGTATATCTTTTATACTGG+AGG | + | chr7_4:63090051-63090070 | None:intergenic | 35.0% |
| ! | AGCCGGTATATCTTTTATAC+TGG | + | chr7_4:63090054-63090073 | None:intergenic | 35.0% |
| GTAAATCACAAGTGAAATGG+GGG | - | chr7_4:63090198-63090217 | Msa1170000:five_prime_UTR | 35.0% | |
| ACGAGTGAAACGAATCTCTT+TGG | + | chr7_4:63084717-63084736 | None:intergenic | 40.0% | |
| CGTTTCACTCGTTGAAATTC+AGG | - | chr7_4:63084725-63084744 | Msa1170000:three_prime_UTR | 40.0% | |
| TCAGTTGAGAGGTGAAAATG+GGG | - | chr7_4:63084805-63084824 | Msa1170000:CDS | 40.0% | |
| CAGGAACATTTGGATACTTC+TGG | - | chr7_4:63085271-63085290 | Msa1170000:intron | 40.0% | |
| TTCATTGAATGAACCGTTGC+TGG | - | chr7_4:63085300-63085319 | Msa1170000:intron | 40.0% | |
| TCATTGAATGAACCGTTGCT+GGG | - | chr7_4:63085301-63085320 | Msa1170000:intron | 40.0% | |
| !! | CGTTCTATGCTTGGTTTTTG+TGG | - | chr7_4:63085677-63085696 | Msa1170000:CDS | 40.0% |
| AGTGGCAAATCCATTGGAAT+AGG | + | chr7_4:63085743-63085762 | None:intergenic | 40.0% | |
| ATTTGCCACTCTTGCAAACA+AGG | - | chr7_4:63085753-63085772 | Msa1170000:CDS | 40.0% | |
| ! | ACTTTCCTTGTTTGCAAGAG+TGG | + | chr7_4:63085761-63085780 | None:intergenic | 40.0% |
| CTGAAGTCTTACGTTTAGAG+TGG | - | chr7_4:63085806-63085825 | Msa1170000:intron | 40.0% | |
| ! | GTATGATCAAGCACGTCTTT+TGG | - | chr7_4:63085856-63085875 | Msa1170000:intron | 40.0% |
| TTAGTGGAGTGAATTGATGG+AGG | - | chr7_4:63085891-63085910 | Msa1170000:intron | 40.0% | |
| TTAATGAGGTCGCAATCACA+AGG | - | chr7_4:63085940-63085959 | Msa1170000:intron | 40.0% | |
| ! | TGCAAATGGCATGCTTTTAG+TGG | - | chr7_4:63086441-63086460 | Msa1170000:intron | 40.0% |
| ! | CTTTTATCGCATTCTACTGC+CGG | - | chr7_4:63086546-63086565 | Msa1170000:intron | 40.0% |
| TCTCTATACATACCTGCACA+GGG | + | chr7_4:63086614-63086633 | None:intergenic | 40.0% | |
| ATCTCTATACATACCTGCAC+AGG | + | chr7_4:63086615-63086634 | None:intergenic | 40.0% | |
| ACAAAGGATGGTTGAGTTAC+GGG | + | chr7_4:63086787-63086806 | None:intergenic | 40.0% | |
| GACAAAGGATGGTTGAGTTA+CGG | + | chr7_4:63086788-63086807 | None:intergenic | 40.0% | |
| AGACTACAGAAGTTCAGCAA+AGG | + | chr7_4:63087221-63087240 | None:intergenic | 40.0% | |
| ! | TGTAGTCTCTTTTGTGGAGT+TGG | - | chr7_4:63087233-63087252 | Msa1170000:intron | 40.0% |
| AGATTGAACAGGCAGAATAC+AGG | + | chr7_4:63087519-63087538 | None:intergenic | 40.0% | |
| AAATGACAGCGAGATTGAAC+AGG | + | chr7_4:63087530-63087549 | None:intergenic | 40.0% | |
| AGATGCGCAAAAGCAAGATA+TGG | + | chr7_4:63087777-63087796 | None:intergenic | 40.0% | |
| ATTTAAGTGGAGGAAGCTCT+CGG | + | chr7_4:63087930-63087949 | None:intergenic | 40.0% | |
| ATTGTTGGAAGGAAATGGGA+TGG | - | chr7_4:63087953-63087972 | Msa1170000:intron | 40.0% | |
| ! | CAGACCCATCAACAGATTTT+AGG | - | chr7_4:63087983-63088002 | Msa1170000:intron | 40.0% |
| ! | TTTACTTTAAGGAGATGGGG+AGG | - | chr7_4:63088019-63088038 | Msa1170000:intron | 40.0% |
| ! | TTACTTTAAGGAGATGGGGA+GGG | - | chr7_4:63088020-63088039 | Msa1170000:intron | 40.0% |
| CCCAAAAACTAGCTCAAGAA+GGG | + | chr7_4:63088312-63088331 | None:intergenic | 40.0% | |
| !!! | CCCTTCTTGAGCTAGTTTTT+GGG | - | chr7_4:63088309-63088328 | Msa1170000:CDS | 40.0% |
| GAGCTCATTAGATCTAACCA+TGG | - | chr7_4:63088425-63088444 | Msa1170000:intron | 40.0% | |
| ! | TAGATCTAACCATGGTTTGC+AGG | - | chr7_4:63088433-63088452 | Msa1170000:intron | 40.0% |
| ! | AGATCTAACCATGGTTTGCA+GGG | - | chr7_4:63088434-63088453 | Msa1170000:intron | 40.0% |
| ACTTCTGCGCAAAAAAGATG+AGG | + | chr7_4:63088485-63088504 | None:intergenic | 40.0% | |
| ! | TTTTTACATTGGCCCAAGTC+GGG | + | chr7_4:63088616-63088635 | None:intergenic | 40.0% |
| TTTCTACTTGGCAATGCCAT+AGG | - | chr7_4:63089080-63089099 | Msa1170000:intron | 40.0% | |
| AATCGCTGAAATGAGACCTA+TGG | + | chr7_4:63089099-63089118 | None:intergenic | 40.0% | |
| GAATATCCATTTGCAGTAGC+TGG | - | chr7_4:63089153-63089172 | Msa1170000:intron | 40.0% | |
| TTGATTCCAGCTACTGCAAA+TGG | + | chr7_4:63089162-63089181 | None:intergenic | 40.0% | |
| ATTTATGTTGGTGCAGATGC+TGG | - | chr7_4:63089188-63089207 | Msa1170000:intron | 40.0% | |
| GACCATATCTCATCCAATGT+GGG | + | chr7_4:63089283-63089302 | None:intergenic | 40.0% | |
| AGACCATATCTCATCCAATG+TGG | + | chr7_4:63089284-63089303 | None:intergenic | 40.0% | |
| AAAACAAGCGTACGAGATAG+AGG | + | chr7_4:63089334-63089353 | None:intergenic | 40.0% | |
| !!! | CTTGTTTTGTTACGATGAGC+TGG | - | chr7_4:63089346-63089365 | Msa1170000:CDS | 40.0% |
| GACTCGATTGTACTTTGCAA+TGG | + | chr7_4:63089506-63089525 | None:intergenic | 40.0% | |
| ! | CTAGTCAGATAAGGTTTGGT+TGG | + | chr7_4:63089598-63089617 | None:intergenic | 40.0% |
| CAACCAAACCTTATCTGACT+AGG | - | chr7_4:63089596-63089615 | Msa1170000:CDS | 40.0% | |
| AGAAGATGGAACAACTGCAA+CGG | + | chr7_4:63089748-63089767 | None:intergenic | 40.0% | |
| AGTTGTTCCATCTTCTTCGT+CGG | - | chr7_4:63089752-63089771 | Msa1170000:intron | 40.0% | |
| ! | CGTCGGGAATATGTTTTCTA+CGG | - | chr7_4:63089769-63089788 | Msa1170000:intron | 40.0% |
| CTGAGCATCCATCATTTGAA+AGG | + | chr7_4:63089841-63089860 | None:intergenic | 40.0% | |
| !! | TTCAAATGATGGATGCTCAG+TGG | - | chr7_4:63089841-63089860 | Msa1170000:intron | 40.0% |
| TGCAAAGCGTGCTACATATA+TGG | - | chr7_4:63089866-63089885 | Msa1170000:intron | 40.0% | |
| !! | TCGGTTTGGTTTCAGTTGAG+AGG | - | chr7_4:63084794-63084813 | Msa1170000:exon | 45.0% |
| TTGAGGAGAAGACTCCATCA+CGG | - | chr7_4:63085229-63085248 | Msa1170000:intron | 45.0% | |
| ! | ACGGGGATGTTGATGGAAAA+CGG | - | chr7_4:63085248-63085267 | Msa1170000:intron | 45.0% |
| TGGAAAACGGCAGGAACATT+TGG | - | chr7_4:63085261-63085280 | Msa1170000:intron | 45.0% | |
| TAATCATCACCTCCCAGCAA+CGG | + | chr7_4:63085316-63085335 | None:intergenic | 45.0% | |
| GTGGGATGATGAGAGAAAGA+AGG | - | chr7_4:63085468-63085487 | Msa1170000:intron | 45.0% | |
| TTTCGAACCTCATTGCGCAA+TGG | - | chr7_4:63085515-63085534 | Msa1170000:intron | 45.0% | |
| TTCGAACCTCATTGCGCAAT+GGG | - | chr7_4:63085516-63085535 | Msa1170000:intron | 45.0% | |
| TGCAAGAGTGGCAAATCCAT+TGG | + | chr7_4:63085749-63085768 | None:intergenic | 45.0% | |
| !!! | AAGCACGTCTTTTGGAGCTT+GGG | - | chr7_4:63085864-63085883 | Msa1170000:intron | 45.0% |
| !! | TTGGAGCTTGGGAGTATTAG+TGG | - | chr7_4:63085875-63085894 | Msa1170000:intron | 45.0% |
| TGGAGTGAATTGATGGAGGA+GGG | - | chr7_4:63085895-63085914 | Msa1170000:intron | 45.0% | |
| GGAGGAGGGTGATTGAAAAT+TGG | - | chr7_4:63085909-63085928 | Msa1170000:intron | 45.0% | |
| !! | GCAAACATTGTTCTAGGGTC+TGG | - | chr7_4:63086507-63086526 | Msa1170000:intron | 45.0% |
| CAAAGGATGGTTGAGTTACG+GGG | + | chr7_4:63086786-63086805 | None:intergenic | 45.0% | |
| ! | CAGTGAGGTATTCGAGAAAC+TGG | + | chr7_4:63086911-63086930 | None:intergenic | 45.0% |
| !!! | TGTGTTTTGGAAGGCATCAG+TGG | - | chr7_4:63086934-63086953 | Msa1170000:CDS | 45.0% |
| !!! | GTGTTTTGGAAGGCATCAGT+GGG | - | chr7_4:63086935-63086954 | Msa1170000:CDS | 45.0% |
| ! | AGGACGCTCTTTTACAACTG+TGG | - | chr7_4:63087887-63087906 | Msa1170000:intron | 45.0% |
| ! | TACTTTAAGGAGATGGGGAG+GGG | - | chr7_4:63088021-63088040 | Msa1170000:intron | 45.0% |
| !!! | GCCCTTCTTGAGCTAGTTTT+TGG | - | chr7_4:63088308-63088327 | Msa1170000:CDS | 45.0% |
| GCCCAAAAACTAGCTCAAGA+AGG | + | chr7_4:63088313-63088332 | None:intergenic | 45.0% | |
| ! | GATCTAACCATGGTTTGCAG+GGG | - | chr7_4:63088435-63088454 | Msa1170000:intron | 45.0% |
| CGCTGCAACGTAATTCTAAG+AGG | - | chr7_4:63088868-63088887 | Msa1170000:intron | 45.0% | |
| TAGCCTACCGCATTTCTACT+TGG | - | chr7_4:63089068-63089087 | Msa1170000:intron | 45.0% | |
| TTGCCAAGTAGAAATGCGGT+AGG | + | chr7_4:63089074-63089093 | None:intergenic | 45.0% | |
| GGCATTGCCAAGTAGAAATG+CGG | + | chr7_4:63089078-63089097 | None:intergenic | 45.0% | |
| ATGGATATTCCCACTCTGCT+CGG | + | chr7_4:63089143-63089162 | None:intergenic | 45.0% | |
| CAGATGCTGGATCTTCAATC+AGG | - | chr7_4:63089201-63089220 | Msa1170000:intron | 45.0% | |
| ACATGTTGAGAGTCCCACAT+TGG | - | chr7_4:63089267-63089286 | Msa1170000:intron | 45.0% | |
| GTCCCACATTGGATGAGATA+TGG | - | chr7_4:63089278-63089297 | Msa1170000:intron | 45.0% | |
| CCACCTAGTCAGATAAGGTT+TGG | + | chr7_4:63089602-63089621 | None:intergenic | 45.0% | |
| CCAAACCTTATCTGACTAGG+TGG | - | chr7_4:63089599-63089618 | Msa1170000:CDS | 45.0% | |
| GTTCTCCACCTAGTCAGATA+AGG | + | chr7_4:63089607-63089626 | None:intergenic | 45.0% | |
| AAGATGGAACAACTGCAACG+GGG | + | chr7_4:63089746-63089765 | None:intergenic | 45.0% | |
| GAAGATGGAACAACTGCAAC+GGG | + | chr7_4:63089747-63089766 | None:intergenic | 45.0% | |
| GTTGTTCCATCTTCTTCGTC+GGG | - | chr7_4:63089753-63089772 | Msa1170000:intron | 45.0% | |
| CATATTCCCGACGAAGAAGA+TGG | + | chr7_4:63089762-63089781 | None:intergenic | 45.0% | |
| ! | ATGTTTTCTACGGCTGCTTG+AGG | - | chr7_4:63089779-63089798 | Msa1170000:intron | 45.0% |
| CATCTCAACATGTTGTGAGC+CGG | + | chr7_4:63090071-63090090 | None:intergenic | 45.0% | |
| !!! | ATAATAAGATAATAATTTTT+CGG | - | chr7_4:63088654-63088673 | Msa1170000:intron | 5.0% |
| TGAGGAGAAGACTCCATCAC+GGG | - | chr7_4:63085230-63085249 | Msa1170000:intron | 50.0% | |
| TTCCATCAACATCCCCGTGA+TGG | + | chr7_4:63085246-63085265 | None:intergenic | 50.0% | |
| ! | GGATGTTGATGGAAAACGGC+AGG | - | chr7_4:63085252-63085271 | Msa1170000:intron | 50.0% |
| TTGAATGAACCGTTGCTGGG+AGG | - | chr7_4:63085304-63085323 | Msa1170000:intron | 50.0% | |
| !!! | CAAGCACGTCTTTTGGAGCT+TGG | - | chr7_4:63085863-63085882 | Msa1170000:intron | 50.0% |
| GTGGAGTGAATTGATGGAGG+AGG | - | chr7_4:63085894-63085913 | Msa1170000:intron | 50.0% | |
| ATGAGGTCGCAATCACAAGG+TGG | - | chr7_4:63085943-63085962 | Msa1170000:intron | 50.0% | |
| !! | TGGAAGGCATCAGTGGGTAA+TGG | - | chr7_4:63086941-63086960 | Msa1170000:CDS | 50.0% |
| CGGCTTGAAGTTCCCTTTGA+CGG | - | chr7_4:63087362-63087381 | Msa1170000:intron | 50.0% | |
| TGGAAGGAAATGGGATGGCA+AGG | - | chr7_4:63087958-63087977 | Msa1170000:intron | 50.0% | |
| GAGGGGCCTGAATATGGATA+AGG | - | chr7_4:63088038-63088057 | Msa1170000:intron | 50.0% | |
| AGCTCAAGAAGGGCGATGAT+TGG | + | chr7_4:63088302-63088321 | None:intergenic | 50.0% | |
| AAATTTGTCCGGTCCCGACT+TGG | - | chr7_4:63088600-63088619 | Msa1170000:intron | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | - | chr7_4:63088601-63088620 | Msa1170000:intron | 50.0% | |
| AAGATGGAATCCGAGCAGAG+TGG | - | chr7_4:63089130-63089149 | Msa1170000:intron | 50.0% | |
| AGATGGAATCCGAGCAGAGT+GGG | - | chr7_4:63089131-63089150 | Msa1170000:intron | 50.0% | |
| ! | TTTTCTACGGCTGCTTGAGG+AGG | - | chr7_4:63089782-63089801 | Msa1170000:intron | 50.0% |
| GCTGCTTGAGGAGGATGAAA+TGG | - | chr7_4:63089791-63089810 | Msa1170000:intron | 50.0% | |
| GAGGAGAAGACTCCATCACG+GGG | - | chr7_4:63085231-63085250 | Msa1170000:intron | 55.0% | |
| CTCCATCACGGGGATGTTGA+TGG | - | chr7_4:63085241-63085260 | Msa1170000:intron | 55.0% | |
| ACTGTGCCCATTGCGCAATG+AGG | + | chr7_4:63085525-63085544 | None:intergenic | 55.0% | |
| TCATTGCGCAATGGGCACAG+TGG | - | chr7_4:63085524-63085543 | Msa1170000:intron | 55.0% | |
| GGTCGCAATCACAAGGTGGT+TGG | - | chr7_4:63085947-63085966 | Msa1170000:intron | 55.0% | |
| !! | TGCACAGGGCTAAGTGTTGG+AGG | + | chr7_4:63086600-63086619 | None:intergenic | 55.0% |
| TCCAACACTTAGCCCTGTGC+AGG | - | chr7_4:63086599-63086618 | Msa1170000:intron | 55.0% | |
| ACCTGCACAGGGCTAAGTGT+TGG | + | chr7_4:63086603-63086622 | None:intergenic | 55.0% | |
| GGTTGAGTTACGGGGTGTGA+TGG | + | chr7_4:63086778-63086797 | None:intergenic | 55.0% | |
| ! | CTAACCATGGTTTGCAGGGG+TGG | - | chr7_4:63088438-63088457 | Msa1170000:intron | 55.0% |
| GCGCAATGGGCACAGTGGTT+AGG | - | chr7_4:63085529-63085548 | Msa1170000:intron | 60.0% | |
| AGTGGAGGAAGCTCTCGGTC+AGG | + | chr7_4:63087925-63087944 | None:intergenic | 60.0% | |
| GATGGGGAGGGGCCTGAATA+TGG | - | chr7_4:63088032-63088051 | Msa1170000:intron | 60.0% | |
| ! | ACCATGGTTTGCAGGGGTGG+AGG | - | chr7_4:63088441-63088460 | Msa1170000:intron | 60.0% |
| ! | CCATGGTTTGCAGGGGTGGA+GGG | - | chr7_4:63088442-63088461 | Msa1170000:intron | 60.0% |
| ACATTGGCCCAAGTCGGGAC+CGG | + | chr7_4:63088611-63088630 | None:intergenic | 60.0% | |
| CCCTCCACCCCTGCAAACCA+TGG | + | chr7_4:63088445-63088464 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 63084538 | 63090348 | 63084538 | ID=Msa1170000;Name=Msa1170000 |
| chr7_4 | mRNA | 63084538 | 63090348 | 63084538 | ID=Msa1170000-mRNA-1;Parent=Msa1170000;Name=Msa1170000-mRNA-1;_AED=0.12;_eAED=0.12;_QI=239|1|1|1|0.88|0.8|10|257|318 |
| chr7_4 | exon | 63084538 | 63084893 | 63084538 | ID=Msa1170000-mRNA-1:exon:20163;Parent=Msa1170000-mRNA-1 |
| chr7_4 | exon | 63084990 | 63085132 | 63084990 | ID=Msa1170000-mRNA-1:exon:20162;Parent=Msa1170000-mRNA-1 |
| chr7_4 | exon | 63085664 | 63085784 | 63085664 | ID=Msa1170000-mRNA-1:exon:20161;Parent=Msa1170000-mRNA-1 |
| chr7_4 | exon | 63086377 | 63086431 | 63086377 | ID=Msa1170000-mRNA-1:exon:20160;Parent=Msa1170000-mRNA-1 |
| chr7_4 | exon | 63086882 | 63086997 | 63086882 | ID=Msa1170000-mRNA-1:exon:20159;Parent=Msa1170000-mRNA-1 |
| chr7_4 | exon | 63087483 | 63087551 | 63087483 | ID=Msa1170000-mRNA-1:exon:20158;Parent=Msa1170000-mRNA-1 |
| chr7_4 | exon | 63088266 | 63088378 | 63088266 | ID=Msa1170000-mRNA-1:exon:20157;Parent=Msa1170000-mRNA-1 |
| chr7_4 | exon | 63089336 | 63089438 | 63089336 | ID=Msa1170000-mRNA-1:exon:20156;Parent=Msa1170000-mRNA-1 |
| chr7_4 | exon | 63089535 | 63089702 | 63089535 | ID=Msa1170000-mRNA-1:exon:20155;Parent=Msa1170000-mRNA-1 |
| chr7_4 | exon | 63090140 | 63090348 | 63090140 | ID=Msa1170000-mRNA-1:exon:20154;Parent=Msa1170000-mRNA-1 |
| chr7_4 | five_prime_UTR | 63090140 | 63090348 | 63090140 | ID=Msa1170000-mRNA-1:five_prime_utr;Parent=Msa1170000-mRNA-1 |
| chr7_4 | five_prime_UTR | 63089673 | 63089702 | 63089673 | ID=Msa1170000-mRNA-1:five_prime_utr;Parent=Msa1170000-mRNA-1 |
| chr7_4 | CDS | 63089535 | 63089672 | 63089535 | ID=Msa1170000-mRNA-1:cds;Parent=Msa1170000-mRNA-1 |
| chr7_4 | CDS | 63089336 | 63089438 | 63089336 | ID=Msa1170000-mRNA-1:cds;Parent=Msa1170000-mRNA-1 |
| chr7_4 | CDS | 63088266 | 63088378 | 63088266 | ID=Msa1170000-mRNA-1:cds;Parent=Msa1170000-mRNA-1 |
| chr7_4 | CDS | 63087483 | 63087551 | 63087483 | ID=Msa1170000-mRNA-1:cds;Parent=Msa1170000-mRNA-1 |
| chr7_4 | CDS | 63086882 | 63086997 | 63086882 | ID=Msa1170000-mRNA-1:cds;Parent=Msa1170000-mRNA-1 |
| chr7_4 | CDS | 63086377 | 63086431 | 63086377 | ID=Msa1170000-mRNA-1:cds;Parent=Msa1170000-mRNA-1 |
| chr7_4 | CDS | 63085664 | 63085784 | 63085664 | ID=Msa1170000-mRNA-1:cds;Parent=Msa1170000-mRNA-1 |
| chr7_4 | CDS | 63084990 | 63085132 | 63084990 | ID=Msa1170000-mRNA-1:cds;Parent=Msa1170000-mRNA-1 |
| chr7_4 | CDS | 63084795 | 63084893 | 63084795 | ID=Msa1170000-mRNA-1:cds;Parent=Msa1170000-mRNA-1 |
| chr7_4 | three_prime_UTR | 63084538 | 63084794 | 63084538 | ID=Msa1170000-mRNA-1:three_prime_utr;Parent=Msa1170000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
