Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119610 | XP_024625451.1 | 81.290 | 620 | 76 | 3 | 1 | 580 | 1 | 620 | 0.0 | 996 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119610 | A0A396H208 | 81.290 | 620 | 76 | 3 | 1 | 580 | 1 | 620 | 0.0 | 996 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1070210 | Msa1119610 | 0.909611 | 4.701803e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119610 | MtrunA17_Chr7g0252421 | 81.290 | 620 | 76 | 3 | 1 | 580 | 1 | 620 | 0.0 | 996 |
| Msa1119610 | MtrunA17_Chr7g0252431 | 63.704 | 540 | 117 | 7 | 37 | 539 | 1 | 498 | 0.0 | 639 |
| Msa1119610 | MtrunA17_Chr2g0316801 | 54.310 | 116 | 52 | 1 | 464 | 579 | 68 | 182 | 4.34e-29 | 114 |
| Msa1119610 | MtrunA17_Chr4g0042601 | 37.168 | 113 | 34 | 3 | 66 | 144 | 10 | 119 | 6.14e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119610 | AT5G13920.1 | 42.857 | 112 | 60 | 3 | 81 | 190 | 37 | 146 | 7.60e-22 | 98.6 |
| Msa1119610 | AT5G13920.2 | 42.857 | 112 | 60 | 3 | 81 | 190 | 37 | 146 | 1.32e-21 | 98.2 |
| Msa1119610 | AT1G54930.2 | 39.823 | 113 | 53 | 5 | 81 | 186 | 38 | 142 | 2.53e-15 | 78.6 |
| Msa1119610 | AT3G42860.1 | 36.792 | 106 | 49 | 4 | 83 | 172 | 96 | 199 | 3.31e-12 | 68.9 |
Find 137 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATCATGCCAAGTTTA+TGG | 0.162827 | 7_3:+68587300 | Msa1119610:CDS |
| AACTTCCTCCCATAGTTATT+TGG | 0.187096 | 7_3:-68584761 | None:intergenic |
| TTCACTTCCTGGTGATCTAT+TGG | 0.189914 | 7_3:-68587095 | None:intergenic |
| TCCTTTAGCTGTTCACTTCC+TGG | 0.216962 | 7_3:-68587106 | None:intergenic |
| TTGTCGACAGAGCGTATTTC+AGG | 0.217309 | 7_3:+68586261 | Msa1119610:CDS |
| AAAACATCATACCTGTTTAA+TGG | 0.218571 | 7_3:-68585054 | None:intergenic |
| TCACTTCCTGGTGATCTATT+GGG | 0.222828 | 7_3:-68587094 | None:intergenic |
| TTTCCCAAGGATAATCCTTT+TGG | 0.268590 | 7_3:-68587903 | None:intergenic |
| TCATACTCAAACTGAATATA+TGG | 0.271091 | 7_3:-68586160 | None:intergenic |
| GCTCATACTCCAAATAACTA+TGG | 0.290254 | 7_3:+68584752 | Msa1119610:CDS |
| TGAAGAGTACTCGTTTGTTT+TGG | 0.318646 | 7_3:-68586995 | None:intergenic |
| TCTCAATGATCTAGAGGGTT+TGG | 0.330384 | 7_3:+68587171 | Msa1119610:CDS |
| CGTTGAAGAAAGTTTAGATT+TGG | 0.331795 | 7_3:-68584680 | None:intergenic |
| CCTGAGTGTCAATGTCTTGC+TGG | 0.341031 | 7_3:+68584984 | Msa1119610:CDS |
| GTTTCAATCATTTGATCCTA+TGG | 0.343262 | 7_3:+68586967 | Msa1119610:CDS |
| AAACATCATACCTGTTTAAT+GGG | 0.343581 | 7_3:-68585053 | None:intergenic |
| GAGAGATCTGCTTGCTTTGT+CGG | 0.351865 | 7_3:-68585925 | None:intergenic |
| TTCTTCAACGAATGCAGATA+TGG | 0.362912 | 7_3:+68584693 | Msa1119610:CDS |
| ATTTCTGCTGATGCATCATT+TGG | 0.366884 | 7_3:+68586292 | Msa1119610:CDS |
| AAGTTTAGATTTGGAGGGTA+AGG | 0.372144 | 7_3:-68584671 | None:intergenic |
| AGCCTTCTCCAGTGCTGTCT+TGG | 0.381438 | 7_3:-68587683 | None:intergenic |
| CTTGAGAGAGACGTTGGAAT+TGG | 0.387762 | 7_3:-68584479 | None:intergenic |
| TACATCACTGTGTAAATTAG+TGG | 0.401465 | 7_3:-68584309 | None:intergenic |
| TGAAGAAGTCGCTAATCTTC+AGG | 0.402805 | 7_3:+68587477 | Msa1119610:CDS |
| GTCAATTTCTGCCATAAACT+TGG | 0.408321 | 7_3:-68587311 | None:intergenic |
| ATTGGGGCTTACTACATTTG+TGG | 0.412109 | 7_3:-68587077 | None:intergenic |
| TTATCTATAATGTTATTAGT+AGG | 0.424231 | 7_3:+68587835 | Msa1119610:three_prime_UTR |
| GGAGCACATTAAATTCTTAG+AGG | 0.426209 | 7_3:+68587363 | Msa1119610:CDS |
| ATCTGCTTGCTTTGTCGGTA+AGG | 0.434008 | 7_3:-68585920 | None:intergenic |
| TTCTCCAAAAGGATTATCCT+TGG | 0.434174 | 7_3:+68587899 | Msa1119610:three_prime_UTR |
| AGAGTTGAAATCTTGTGAAC+TGG | 0.435454 | 7_3:+68587522 | Msa1119610:CDS |
| CTGTCGACAACTGGTCTTTG+AGG | 0.436550 | 7_3:-68586248 | None:intergenic |
| AGAGGAGGAGAAAGTGAGAT+TGG | 0.441960 | 7_3:+68587381 | Msa1119610:CDS |
| TGTGAATTGTCTTCCTCTGT+TGG | 0.446364 | 7_3:-68586124 | None:intergenic |
| TTACTACATTTGTGGAAAGC+TGG | 0.448068 | 7_3:-68587069 | None:intergenic |
| TAAACAATTTAACACTGAAA+AGG | 0.453558 | 7_3:-68587236 | None:intergenic |
| CATGGAAAATTCGCCTACTC+TGG | 0.455767 | 7_3:+68587339 | Msa1119610:CDS |
| AGCGGTGATATTTATGCAGC+AGG | 0.459863 | 7_3:+68587144 | Msa1119610:CDS |
| ATGAGATGATAGAGAAGCTT+CGG | 0.460418 | 7_3:-68586215 | None:intergenic |
| TACTACATTTGTGGAAAGCT+GGG | 0.461766 | 7_3:-68587068 | None:intergenic |
| CACTTCCTGGTGATCTATTG+GGG | 0.464562 | 7_3:-68587093 | None:intergenic |
| AAATACGCTCTGTCGACAAC+TGG | 0.468375 | 7_3:-68586257 | None:intergenic |
| CTTTACATGTCCCATCAGAT+TGG | 0.471970 | 7_3:+68584784 | Msa1119610:CDS |
| CTCTCTCAATGAATATATTG+AGG | 0.476634 | 7_3:+68585943 | Msa1119610:CDS |
| TGAAGAAAGTTTAGATTTGG+AGG | 0.477260 | 7_3:-68584677 | None:intergenic |
| GAAAGCTGGGTGCATTGATT+AGG | 0.478504 | 7_3:-68587055 | None:intergenic |
| AAGTGAGATTGGCTAACATC+CGG | 0.482030 | 7_3:+68587392 | Msa1119610:CDS |
| TGTTGGATGAAACTGAGAAT+GGG | 0.485353 | 7_3:-68584630 | None:intergenic |
| TGTCGACAACTGGTCTTTGA+GGG | 0.487261 | 7_3:-68586247 | None:intergenic |
| AGTTGCAGCCAAGACAGCAC+TGG | 0.488091 | 7_3:+68587675 | Msa1119610:CDS |
| ACTAATTTACACAGTGATGT+AGG | 0.494217 | 7_3:+68584311 | Msa1119610:five_prime_UTR |
| TCTCCAAAAGGATTATCCTT+GGG | 0.497217 | 7_3:+68587900 | Msa1119610:three_prime_UTR |
| AGATTAACTCTGCATAGTGC+AGG | 0.497519 | 7_3:-68587808 | None:intergenic |
| CTAATTTACACAGTGATGTA+GGG | 0.499649 | 7_3:+68584312 | Msa1119610:five_prime_UTR |
| ATCTTGTGAACTGGAGAAGA+TGG | 0.500732 | 7_3:+68587531 | Msa1119610:CDS |
| GATAGACTTAGTTGCAATTG+AGG | 0.502431 | 7_3:+68586192 | Msa1119610:CDS |
| ATGTAACAATGTTCTCCAAA+AGG | 0.502747 | 7_3:+68587888 | Msa1119610:three_prime_UTR |
| ATATGGTGTCCTTGCGGTCA+TGG | 0.508748 | 7_3:+68584710 | Msa1119610:CDS |
| GAAGAGCTTGAGAGAGACGT+TGG | 0.509426 | 7_3:-68584485 | None:intergenic |
| ACCAGGAAGTGAACAGCTAA+AGG | 0.511344 | 7_3:+68587105 | Msa1119610:CDS |
| TCTCTCAATGAATATATTGA+GGG | 0.517423 | 7_3:+68585944 | Msa1119610:CDS |
| GACGTTGCAAATCAGTCTCA+TGG | 0.521285 | 7_3:-68584947 | None:intergenic |
| TAGATTTGGAGGGTAAGGAG+TGG | 0.525323 | 7_3:-68584666 | None:intergenic |
| TACTAATAACATTATAGATA+AGG | 0.526370 | 7_3:-68587833 | None:intergenic |
| GTTTCGTTGTTCTTCAACAG+TGG | 0.527464 | 7_3:-68584516 | None:intergenic |
| AGTGAGATTGGCTAACATCC+GGG | 0.531581 | 7_3:+68587393 | Msa1119610:CDS |
| CCTCAGCGAAGTCATTAGTC+AGG | 0.536242 | 7_3:-68585994 | None:intergenic |
| ACGATGCTTGTGTTATCGAC+TGG | 0.536824 | 7_3:-68585896 | None:intergenic |
| ATTGATATCAAACAGGGTCA+TGG | 0.537624 | 7_3:+68585815 | Msa1119610:intron |
| TTGTTGGATGAAACTGAGAA+TGG | 0.539408 | 7_3:-68584631 | None:intergenic |
| CGTTGCCAGCTGTATCAACT+TGG | 0.539514 | 7_3:-68585970 | None:intergenic |
| GTAGTAACATACCAATCTGA+TGG | 0.542444 | 7_3:-68584795 | None:intergenic |
| CTCATACTCCAAATAACTAT+GGG | 0.546444 | 7_3:+68584753 | Msa1119610:CDS |
| CAATCTTCACACAGTCATCC+CGG | 0.546682 | 7_3:-68587411 | None:intergenic |
| TGTCTCTCATAGACTCGTGC+TGG | 0.547080 | 7_3:-68587201 | None:intergenic |
| TGTCGACAGAGCGTATTTCA+GGG | 0.547872 | 7_3:+68586262 | Msa1119610:CDS |
| GGCAGAAATTGACAAGTCCA+TGG | 0.550972 | 7_3:+68587321 | Msa1119610:CDS |
| GGAGACCAAGTTGATACAGC+TGG | 0.551737 | 7_3:+68585965 | Msa1119610:CDS |
| TGAAGGAGAATGAGGAATGA+TGG | 0.551786 | 7_3:-68584606 | None:intergenic |
| TCAGATACAGCCACAGGTGA+AGG | 0.551842 | 7_3:-68586073 | None:intergenic |
| GAAGAAAGTTTAGATTTGGA+GGG | 0.553211 | 7_3:-68584676 | None:intergenic |
| GAATGGGGTGAAGGAGAATG+AGG | 0.553661 | 7_3:-68584614 | None:intergenic |
| GGAATGATGGTGGTTTGTTG+TGG | 0.558071 | 7_3:-68584593 | None:intergenic |
| TTCTGAAACACGGTAACCAC+AGG | 0.559019 | 7_3:-68585840 | None:intergenic |
| GGAGAAGGCTAAACGTGCGT+TGG | 0.565325 | 7_3:+68587696 | Msa1119610:CDS |
| CGACGCAGGTCGCACGGTGA+AGG | 0.567792 | 7_3:-68584340 | None:intergenic |
| AGCCAAGACAGCACTGGAGA+AGG | 0.568562 | 7_3:+68587681 | Msa1119610:CDS |
| CTCGACAAGCAGAAGCGGCA+AGG | 0.570546 | 7_3:+68587623 | Msa1119610:CDS |
| GGGACTTCTCAATGATCTAG+AGG | 0.573353 | 7_3:+68587165 | Msa1119610:CDS |
| TCTTGTTAGGGTAAACCTTG+TGG | 0.574221 | 7_3:+68584897 | Msa1119610:intron |
| GCACATTAAATTCTTAGAGG+AGG | 0.583531 | 7_3:+68587366 | Msa1119610:CDS |
| GTAAGCCCCAATAGATCACC+AGG | 0.584261 | 7_3:+68587088 | Msa1119610:CDS |
| ACAATTTAACACTGAAAAGG+CGG | 0.584452 | 7_3:-68587233 | None:intergenic |
| AACTCTGCATAGTGCAGGGG+TGG | 0.588358 | 7_3:-68587803 | None:intergenic |
| CGATATGAAAAGAAGGATGT+CGG | 0.589160 | 7_3:+68587573 | Msa1119610:CDS |
| TGAAACTGAGAATGGGGTGA+AGG | 0.592296 | 7_3:-68584623 | None:intergenic |
| GATTAACTCTGCATAGTGCA+GGG | 0.593929 | 7_3:-68587807 | None:intergenic |
| GGCTTGACGATATGAAAAGA+AGG | 0.596025 | 7_3:+68587566 | Msa1119610:CDS |
| GGAAAATTCGCCTACTCTGG+AGG | 0.597939 | 7_3:+68587342 | Msa1119610:CDS |
| TTCTGAGAATCCTTCACCTG+TGG | 0.599122 | 7_3:+68586063 | Msa1119610:CDS |
| TAAAACTCGACAAGCAGAAG+CGG | 0.600390 | 7_3:+68587618 | Msa1119610:CDS |
| CCAGCAAGACATTGACACTC+AGG | 0.603118 | 7_3:-68584984 | None:intergenic |
| AGAAGATGGAGGAAGAGACC+CGG | 0.604595 | 7_3:+68587545 | Msa1119610:CDS |
| GGAATCTCAGATACAGCCAC+AGG | 0.604606 | 7_3:-68586079 | None:intergenic |
| TAGTACTGTCGCAGCGACGC+AGG | 0.605913 | 7_3:-68584354 | None:intergenic |
| AGACAGACACCATGACCGCA+AGG | 0.613283 | 7_3:-68584719 | None:intergenic |
| TAGTAACATACCAATCTGAT+GGG | 0.616491 | 7_3:-68584794 | None:intergenic |
| TTAATGTGCTCCTCCAGAGT+AGG | 0.616939 | 7_3:-68587352 | None:intergenic |
| CACCACTTAAAATTACCACA+AGG | 0.620970 | 7_3:-68584912 | None:intergenic |
| ATAGTTATTTGGAGTATGAG+CGG | 0.622038 | 7_3:-68584750 | None:intergenic |
| GTCGACAGAGCGTATTTCAG+GGG | 0.622969 | 7_3:+68586263 | Msa1119610:CDS |
| ATACTCCAAATAACTATGGG+AGG | 0.623595 | 7_3:+68584756 | Msa1119610:CDS |
| CTGACTAATGACTTCGCTGA+GGG | 0.625887 | 7_3:+68585995 | Msa1119610:CDS |
| AACGTGCGTTGGAAAAGTAG+TGG | 0.626649 | 7_3:+68587707 | Msa1119610:CDS |
| AGAACAGAAGATAGGGAACA+AGG | 0.626967 | 7_3:-68587974 | None:intergenic |
| GGCTGTATCTGAGATTCCTG+AGG | 0.627996 | 7_3:+68586084 | Msa1119610:CDS |
| GGACTTCTCAATGATCTAGA+GGG | 0.629522 | 7_3:+68587166 | Msa1119610:CDS |
| TTGCAAATCAGTCTCATGGA+TGG | 0.636503 | 7_3:-68584943 | None:intergenic |
| AAACAGGGTCATGGATCCTG+TGG | 0.637813 | 7_3:+68585824 | Msa1119610:intron |
| GAAGACAATTCACAATCTGA+CGG | 0.638077 | 7_3:+68586133 | Msa1119610:CDS |
| GCGGTGATATTTATGCAGCA+GGG | 0.640685 | 7_3:+68587145 | Msa1119610:CDS |
| GACTCTAATAGCAAAAGTCG+AGG | 0.641535 | 7_3:+68584387 | Msa1119610:five_prime_UTR |
| TTGTGAACTGGAGAAGATGG+AGG | 0.645606 | 7_3:+68587534 | Msa1119610:CDS |
| TAATTTACACAGTGATGTAG+GGG | 0.646688 | 7_3:+68584313 | Msa1119610:five_prime_UTR |
| AAGCAGAGGATCACCAACAG+AGG | 0.648823 | 7_3:+68586111 | Msa1119610:CDS |
| GAAGTTCATCTTCTGAAACA+CGG | 0.652079 | 7_3:-68585850 | None:intergenic |
| AAAAGGATGAGAATAACAGA+TGG | 0.652258 | 7_3:+68586040 | Msa1119610:CDS |
| GTTGGATGAAACTGAGAATG+GGG | 0.652588 | 7_3:-68584629 | None:intergenic |
| CACTCAGGATAAGTAAACAA+AGG | 0.659044 | 7_3:-68584969 | None:intergenic |
| GGAACGAAAACAAAGAGAAG+CGG | 0.669686 | 7_3:+68587126 | Msa1119610:CDS |
| TCGACAGAGCGTATTTCAGG+GGG | 0.670022 | 7_3:+68586264 | Msa1119610:CDS |
| AGGAGAATGAGGAATGATGG+TGG | 0.676312 | 7_3:-68584603 | None:intergenic |
| ATGCAGATATGGTGTCCTTG+CGG | 0.677815 | 7_3:+68584704 | Msa1119610:CDS |
| ATTAACTCTGCATAGTGCAG+GGG | 0.678423 | 7_3:-68587806 | None:intergenic |
| GCTGTATCTGAGATTCCTGA+GGG | 0.692469 | 7_3:+68586085 | Msa1119610:CDS |
| CCTGACTAATGACTTCGCTG+AGG | 0.704482 | 7_3:+68585994 | Msa1119610:CDS |
| TATGAAAAGAAGGATGTCGG+AGG | 0.720927 | 7_3:+68587576 | Msa1119610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGAGAAAAAAAAACA+TGG | - | chr7_3:68584858-68584877 | None:intergenic | 15.0% |
| !!! | TTATTATGTTTTTTCTTGTT+AGG | + | chr7_3:68584884-68584903 | Msa1119610:intron | 15.0% |
| !!! | TATTATGTTTTTTCTTGTTA+GGG | + | chr7_3:68584885-68584904 | Msa1119610:intron | 15.0% |
| !! | TACTAATAACATTATAGATA+AGG | - | chr7_3:68587836-68587855 | None:intergenic | 15.0% |
| !! | TTATCTATAATGTTATTAGT+AGG | + | chr7_3:68587835-68587854 | Msa1119610:three_prime_UTR | 15.0% |
| !! | TATGAAAAATCGAAACTTTA+AGG | - | chr7_3:68584829-68584848 | None:intergenic | 20.0% |
| !! | ACATATACAAAGTAGTTTAA+CGG | - | chr7_3:68585177-68585196 | None:intergenic | 20.0% |
| !!! | GAAGAGTAATTTATTTTTTG+TGG | + | chr7_3:68585652-68585671 | Msa1119610:intron | 20.0% |
| !! | TAATCTTATTGATATCAAAC+AGG | + | chr7_3:68585808-68585827 | Msa1119610:intron | 20.0% |
| !! | AATCTTATTGATATCAAACA+GGG | + | chr7_3:68585809-68585828 | Msa1119610:intron | 20.0% |
| !!! | ATCAAATTAATTTGAACCTA+AGG | + | chr7_3:68586615-68586634 | Msa1119610:intron | 20.0% |
| !! | TAAACAATTTAACACTGAAA+AGG | - | chr7_3:68587239-68587258 | None:intergenic | 20.0% |
| ! | TGGAGTTTGTAAAAAATTGA+TGG | + | chr7_3:68585004-68585023 | Msa1119610:CDS | 25.0% |
| ! | GTTTGTAAAAAATTGATGGA+AGG | + | chr7_3:68585008-68585027 | Msa1119610:CDS | 25.0% |
| !!! | TTTTATTTGTCCCATTAAAC+AGG | + | chr7_3:68585043-68585062 | Msa1119610:CDS | 25.0% |
| ! | AAACATCATACCTGTTTAAT+GGG | - | chr7_3:68585056-68585075 | None:intergenic | 25.0% |
| ! | AAAACATCATACCTGTTTAA+TGG | - | chr7_3:68585057-68585076 | None:intergenic | 25.0% |
| ! | TGTTTGTTTAGTACCAAATA+AGG | + | chr7_3:68585138-68585157 | Msa1119610:intron | 25.0% |
| ! | GTTTGTTTAGTACCAAATAA+GGG | + | chr7_3:68585139-68585158 | Msa1119610:intron | 25.0% |
| !! | TACCAAATAAGGGTTTATTT+TGG | + | chr7_3:68585149-68585168 | Msa1119610:intron | 25.0% |
| ! | CTACTTTGTATATGTATTGT+TGG | + | chr7_3:68585182-68585201 | Msa1119610:intron | 25.0% |
| ! | ATTATGATCAAAATTGCGAT+TGG | + | chr7_3:68585328-68585347 | Msa1119610:intron | 25.0% |
| !! | TAGTCACAAGTTTTTACAAA+AGG | - | chr7_3:68585414-68585433 | None:intergenic | 25.0% |
| ! | AAGTTGAACATTGCAAATAA+AGG | - | chr7_3:68585516-68585535 | None:intergenic | 25.0% |
| ! | TCTCTCAATGAATATATTGA+GGG | + | chr7_3:68585944-68585963 | Msa1119610:CDS | 25.0% |
| ! | TCATACTCAAACTGAATATA+TGG | - | chr7_3:68586163-68586182 | None:intergenic | 25.0% |
| !!! | TGGTACTATTTTCTTTTTTG+TGG | + | chr7_3:68586312-68586331 | Msa1119610:intron | 25.0% |
| ! | TACTAAGTAAAGCAATTGAT+TGG | - | chr7_3:68586462-68586481 | None:intergenic | 25.0% |
| ! | TAATTTGAACCTAAGGAATT+TGG | + | chr7_3:68586622-68586641 | Msa1119610:intron | 25.0% |
| !! | AACAATTTTCTGACTATGTA+TGG | + | chr7_3:68587272-68587291 | Msa1119610:CDS | 25.0% |
| !! | ACAATTTTCTGACTATGTAT+GGG | + | chr7_3:68587273-68587292 | Msa1119610:CDS | 25.0% |
| !!! | TTGTCGAGTTTTATCTTTTA+AGG | - | chr7_3:68587611-68587630 | None:intergenic | 25.0% |
| !! | AAATTCAGTTGAGATTTTAC+AGG | + | chr7_3:68587924-68587943 | Msa1119610:three_prime_UTR | 25.0% |
| TACATCACTGTGTAAATTAG+TGG | - | chr7_3:68584312-68584331 | None:intergenic | 30.0% | |
| ACTAATTTACACAGTGATGT+AGG | + | chr7_3:68584311-68584330 | Msa1119610:five_prime_UTR | 30.0% | |
| CTAATTTACACAGTGATGTA+GGG | + | chr7_3:68584312-68584331 | Msa1119610:five_prime_UTR | 30.0% | |
| TAATTTACACAGTGATGTAG+GGG | + | chr7_3:68584313-68584332 | Msa1119610:five_prime_UTR | 30.0% | |
| AGAAGAAGAAGAAGAAGAAA+TGG | + | chr7_3:68584559-68584578 | Msa1119610:CDS | 30.0% | |
| GAAGAAGAAGAAGAAGAAAT+GGG | + | chr7_3:68584560-68584579 | Msa1119610:CDS | 30.0% | |
| AAGAAGAAGAAGAAGAAATG+GGG | + | chr7_3:68584561-68584580 | Msa1119610:CDS | 30.0% | |
| GAAGAAAGTTTAGATTTGGA+GGG | - | chr7_3:68584679-68584698 | None:intergenic | 30.0% | |
| TGAAGAAAGTTTAGATTTGG+AGG | - | chr7_3:68584680-68584699 | None:intergenic | 30.0% | |
| CGTTGAAGAAAGTTTAGATT+TGG | - | chr7_3:68584683-68584702 | None:intergenic | 30.0% | |
| ! | ATAGTTATTTGGAGTATGAG+CGG | - | chr7_3:68584753-68584772 | None:intergenic | 30.0% |
| CTCATACTCCAAATAACTAT+GGG | + | chr7_3:68584753-68584772 | Msa1119610:CDS | 30.0% | |
| TAGTAACATACCAATCTGAT+GGG | - | chr7_3:68584797-68584816 | None:intergenic | 30.0% | |
| ! | GAAAAATCGAAACTTTAAGG+TGG | - | chr7_3:68584826-68584845 | None:intergenic | 30.0% |
| ! | AACCTTGTGGTAATTTTAAG+TGG | + | chr7_3:68584910-68584929 | Msa1119610:CDS | 30.0% |
| TGTAAAAAATTGATGGAAGG+AGG | + | chr7_3:68585011-68585030 | Msa1119610:CDS | 30.0% | |
| CACCAAAATAAACCCTTATT+TGG | - | chr7_3:68585154-68585173 | None:intergenic | 30.0% | |
| ! | GATTTAAAACCTTGGTTAGT+GGG | - | chr7_3:68585242-68585261 | None:intergenic | 30.0% |
| ! | GTGTTACATAGTTGTTATTG+CGG | + | chr7_3:68585283-68585302 | Msa1119610:intron | 30.0% |
| GTTGAGAATAATTAAACGTG+AGG | + | chr7_3:68585536-68585555 | Msa1119610:intron | 30.0% | |
| AGAATAATTAAACGTGAGGT+GGG | + | chr7_3:68585540-68585559 | Msa1119610:intron | 30.0% | |
| ! | TGAATTGGATTTTCTGTTGA+TGG | + | chr7_3:68585565-68585584 | Msa1119610:intron | 30.0% |
| ATTGTGATCACTGATCAATA+GGG | + | chr7_3:68585602-68585621 | Msa1119610:intron | 30.0% | |
| !!! | TTTTTTGTGGCAATTGTAGT+TGG | + | chr7_3:68585665-68585684 | Msa1119610:intron | 30.0% |
| ! | TTTTTGTGGCAATTGTAGTT+GGG | + | chr7_3:68585666-68585685 | Msa1119610:intron | 30.0% |
| CTCTCTCAATGAATATATTG+AGG | + | chr7_3:68585943-68585962 | Msa1119610:CDS | 30.0% | |
| !! | TTTTGCTATCAACGAACAAA+AGG | + | chr7_3:68586023-68586042 | Msa1119610:CDS | 30.0% |
| AAAAGGATGAGAATAACAGA+TGG | + | chr7_3:68586040-68586059 | Msa1119610:CDS | 30.0% | |
| ATTCAAAATGACATACCTTG+CGG | - | chr7_3:68586400-68586419 | None:intergenic | 30.0% | |
| ATTGGATGTATAGAGAAGAA+GGG | - | chr7_3:68586428-68586447 | None:intergenic | 30.0% | |
| ATAACACAACCAAATTCCTT+AGG | - | chr7_3:68586634-68586653 | None:intergenic | 30.0% | |
| ATCAAGAGAATTTCCACATA+TGG | - | chr7_3:68586751-68586770 | None:intergenic | 30.0% | |
| AATTCTCTTGATCTTATTGC+AGG | + | chr7_3:68586759-68586778 | Msa1119610:intron | 30.0% | |
| GAGTTGGATGAAAGAAAATA+AGG | - | chr7_3:68586812-68586831 | None:intergenic | 30.0% | |
| AAAAATAGCTTAGGTGTGTA+GGG | - | chr7_3:68586848-68586867 | None:intergenic | 30.0% | |
| TAACAGCAGAAAAATAGCTT+AGG | - | chr7_3:68586857-68586876 | None:intergenic | 30.0% | |
| !! | CTATTTTTCTGCTGTTAGTA+TGG | + | chr7_3:68586860-68586879 | Msa1119610:intron | 30.0% |
| CACACAAACAAATGATATCA+AGG | - | chr7_3:68586889-68586908 | None:intergenic | 30.0% | |
| TGAAACATACCTGTAATGAT+GGG | - | chr7_3:68586953-68586972 | None:intergenic | 30.0% | |
| TTGAAACATACCTGTAATGA+TGG | - | chr7_3:68586954-68586973 | None:intergenic | 30.0% | |
| GTTTCAATCATTTGATCCTA+TGG | + | chr7_3:68586967-68586986 | Msa1119610:CDS | 30.0% | |
| ACAATTTAACACTGAAAAGG+CGG | - | chr7_3:68587236-68587255 | None:intergenic | 30.0% | |
| ATGTAACAATGTTCTCCAAA+AGG | + | chr7_3:68587888-68587907 | Msa1119610:three_prime_UTR | 30.0% | |
| !!! | TCGACTTTTGCTATTAGAGT+CGG | - | chr7_3:68584388-68584407 | None:intergenic | 35.0% |
| TGTTGGATGAAACTGAGAAT+GGG | - | chr7_3:68584633-68584652 | None:intergenic | 35.0% | |
| TTGTTGGATGAAACTGAGAA+TGG | - | chr7_3:68584634-68584653 | None:intergenic | 35.0% | |
| AAGTTTAGATTTGGAGGGTA+AGG | - | chr7_3:68584674-68584693 | None:intergenic | 35.0% | |
| TTCTTCAACGAATGCAGATA+TGG | + | chr7_3:68584693-68584712 | Msa1119610:CDS | 35.0% | |
| GCTCATACTCCAAATAACTA+TGG | + | chr7_3:68584752-68584771 | Msa1119610:CDS | 35.0% | |
| ATACTCCAAATAACTATGGG+AGG | + | chr7_3:68584756-68584775 | Msa1119610:CDS | 35.0% | |
| AACTTCCTCCCATAGTTATT+TGG | - | chr7_3:68584764-68584783 | None:intergenic | 35.0% | |
| GTAGTAACATACCAATCTGA+TGG | - | chr7_3:68584798-68584817 | None:intergenic | 35.0% | |
| CACCACTTAAAATTACCACA+AGG | - | chr7_3:68584915-68584934 | None:intergenic | 35.0% | |
| CACTCAGGATAAGTAAACAA+AGG | - | chr7_3:68584972-68584991 | None:intergenic | 35.0% | |
| ! | CGATTTAAAACCTTGGTTAG+TGG | - | chr7_3:68585243-68585262 | None:intergenic | 35.0% |
| !!! | CTAACCAAGGTTTTAAATCG+CGG | + | chr7_3:68585243-68585262 | Msa1119610:intron | 35.0% |
| ATAACAACTATGTAACACCG+AGG | - | chr7_3:68585281-68585300 | None:intergenic | 35.0% | |
| TGCAAATAAAGGACTAAGCT+TGG | - | chr7_3:68585505-68585524 | None:intergenic | 35.0% | |
| GAGAATAATTAAACGTGAGG+TGG | + | chr7_3:68585539-68585558 | Msa1119610:intron | 35.0% | |
| GAATAATTAAACGTGAGGTG+GGG | + | chr7_3:68585541-68585560 | Msa1119610:intron | 35.0% | |
| AATAATTAAACGTGAGGTGG+GGG | + | chr7_3:68585542-68585561 | Msa1119610:intron | 35.0% | |
| GATTGTGATCACTGATCAAT+AGG | + | chr7_3:68585601-68585620 | Msa1119610:intron | 35.0% | |
| CAAAACAAATTCTACAGAGC+AGG | - | chr7_3:68585756-68585775 | None:intergenic | 35.0% | |
| !! | CTGCTCTGTAGAATTTGTTT+TGG | + | chr7_3:68585754-68585773 | Msa1119610:intron | 35.0% |
| !!! | AGAATTTGTTTTGGTCTACC+AGG | + | chr7_3:68585763-68585782 | Msa1119610:intron | 35.0% |
| TACGCATAATGAATAGATCC+TGG | - | chr7_3:68585784-68585803 | None:intergenic | 35.0% | |
| ATTGATATCAAACAGGGTCA+TGG | + | chr7_3:68585815-68585834 | Msa1119610:intron | 35.0% | |
| !! | GAAGTTCATCTTCTGAAACA+CGG | - | chr7_3:68585853-68585872 | None:intergenic | 35.0% |
| GAAGACAATTCACAATCTGA+CGG | + | chr7_3:68586133-68586152 | Msa1119610:CDS | 35.0% | |
| GATAGACTTAGTTGCAATTG+AGG | + | chr7_3:68586192-68586211 | Msa1119610:CDS | 35.0% | |
| ATGAGATGATAGAGAAGCTT+CGG | - | chr7_3:68586218-68586237 | None:intergenic | 35.0% | |
| ATTTCTGCTGATGCATCATT+TGG | + | chr7_3:68586292-68586311 | Msa1119610:CDS | 35.0% | |
| GATTGGATGTATAGAGAAGA+AGG | - | chr7_3:68586429-68586448 | None:intergenic | 35.0% | |
| ATGTTCAGCTATAACGACTT+TGG | - | chr7_3:68586511-68586530 | None:intergenic | 35.0% | |
| GTCGTTATAGCTGAACATAT+AGG | + | chr7_3:68586513-68586532 | Msa1119610:intron | 35.0% | |
| GACAGTAGTATAAGCATATG+TGG | + | chr7_3:68586699-68586718 | Msa1119610:intron | 35.0% | |
| TTTAGTAGAGAAGCCATATG+TGG | + | chr7_3:68586735-68586754 | Msa1119610:intron | 35.0% | |
| !! | GGGGATTTCAAATTTTGAGT+TGG | - | chr7_3:68586828-68586847 | None:intergenic | 35.0% |
| AAAATAGCTTAGGTGTGTAG+GGG | - | chr7_3:68586847-68586866 | None:intergenic | 35.0% | |
| GAAAAATAGCTTAGGTGTGT+AGG | - | chr7_3:68586849-68586868 | None:intergenic | 35.0% | |
| TGAATAATGCAAAGCCAAAG+AGG | - | chr7_3:68586916-68586935 | None:intergenic | 35.0% | |
| ! | TTTTTGTCTCCCATCATTAC+AGG | + | chr7_3:68586941-68586960 | Msa1119610:intron | 35.0% |
| !!! | GTTTGTTTTGGAACATCCAT+AGG | - | chr7_3:68586986-68587005 | None:intergenic | 35.0% |
| !!! | TGAAGAGTACTCGTTTGTTT+TGG | - | chr7_3:68586998-68587017 | None:intergenic | 35.0% |
| TACTACATTTGTGGAAAGCT+GGG | - | chr7_3:68587071-68587090 | None:intergenic | 35.0% | |
| TTACTACATTTGTGGAAAGC+TGG | - | chr7_3:68587072-68587091 | None:intergenic | 35.0% | |
| CATCAATCATGCCAAGTTTA+TGG | + | chr7_3:68587300-68587319 | Msa1119610:CDS | 35.0% | |
| GTCAATTTCTGCCATAAACT+TGG | - | chr7_3:68587314-68587333 | None:intergenic | 35.0% | |
| GGAGCACATTAAATTCTTAG+AGG | + | chr7_3:68587363-68587382 | Msa1119610:CDS | 35.0% | |
| GCACATTAAATTCTTAGAGG+AGG | + | chr7_3:68587366-68587385 | Msa1119610:CDS | 35.0% | |
| !!! | TTTTTGTTTTCGAATGAGCG+CGG | - | chr7_3:68587503-68587522 | None:intergenic | 35.0% |
| AGAGTTGAAATCTTGTGAAC+TGG | + | chr7_3:68587522-68587541 | Msa1119610:CDS | 35.0% | |
| ! | TTCTTTTCATATCGTCAAGC+CGG | - | chr7_3:68587567-68587586 | None:intergenic | 35.0% |
| CGATATGAAAAGAAGGATGT+CGG | + | chr7_3:68587573-68587592 | Msa1119610:CDS | 35.0% | |
| TTCTCCAAAAGGATTATCCT+TGG | + | chr7_3:68587899-68587918 | Msa1119610:three_prime_UTR | 35.0% | |
| TCTCCAAAAGGATTATCCTT+GGG | + | chr7_3:68587900-68587919 | Msa1119610:three_prime_UTR | 35.0% | |
| ! | TTTCCCAAGGATAATCCTTT+TGG | - | chr7_3:68587906-68587925 | None:intergenic | 35.0% |
| ! | ATCTCAACTGAATTTTCCCA+AGG | - | chr7_3:68587919-68587938 | None:intergenic | 35.0% |
| GACTCTAATAGCAAAAGTCG+AGG | + | chr7_3:68584387-68584406 | Msa1119610:five_prime_UTR | 40.0% | |
| GTTTCGTTGTTCTTCAACAG+TGG | - | chr7_3:68584519-68584538 | None:intergenic | 40.0% | |
| TGAAGGAGAATGAGGAATGA+TGG | - | chr7_3:68584609-68584628 | None:intergenic | 40.0% | |
| GTTGGATGAAACTGAGAATG+GGG | - | chr7_3:68584632-68584651 | None:intergenic | 40.0% | |
| !! | GTAAGGAGTGGATTTTTCAG+GGG | - | chr7_3:68584657-68584676 | None:intergenic | 40.0% |
| !! | GGTAAGGAGTGGATTTTTCA+GGG | - | chr7_3:68584658-68584677 | None:intergenic | 40.0% |
| CTTTACATGTCCCATCAGAT+TGG | + | chr7_3:68584784-68584803 | Msa1119610:CDS | 40.0% | |
| !! | TCGAAACTTTAAGGTGGTAC+TGG | - | chr7_3:68584820-68584839 | None:intergenic | 40.0% |
| TCTTGTTAGGGTAAACCTTG+TGG | + | chr7_3:68584897-68584916 | Msa1119610:intron | 40.0% | |
| TTGCAAATCAGTCTCATGGA+TGG | - | chr7_3:68584946-68584965 | None:intergenic | 40.0% | |
| !! | TTTTTAGCACCCACTAACCA+AGG | + | chr7_3:68585230-68585249 | Msa1119610:intron | 40.0% |
| ! | ATGACCGCGATTTAAAACCT+TGG | - | chr7_3:68585250-68585269 | None:intergenic | 40.0% |
| ! | GTTGTTATTGCGGAGAATTC+TGG | + | chr7_3:68585293-68585312 | Msa1119610:intron | 40.0% |
| TCACAATGTCGCAATCTAGA+CGG | + | chr7_3:68585378-68585397 | Msa1119610:intron | 40.0% | |
| TGTGAATTGTCTTCCTCTGT+TGG | - | chr7_3:68586127-68586146 | None:intergenic | 40.0% | |
| TTCTCTATACATCCAATCCC+AGG | + | chr7_3:68586431-68586450 | Msa1119610:intron | 40.0% | |
| GCAATTGATTGGAAAGACCT+GGG | - | chr7_3:68586451-68586470 | None:intergenic | 40.0% | |
| AGCAATTGATTGGAAAGACC+TGG | - | chr7_3:68586452-68586471 | None:intergenic | 40.0% | |
| GTAACTCGAGATGACGTTTA+AGG | - | chr7_3:68586594-68586613 | None:intergenic | 40.0% | |
| TATTGCAGGTTCTTGTCCAA+TGG | + | chr7_3:68586773-68586792 | Msa1119610:intron | 40.0% | |
| TGTTTGTGTGATGTCCTCTT+TGG | + | chr7_3:68586899-68586918 | Msa1119610:intron | 40.0% | |
| ATTGGGGCTTACTACATTTG+TGG | - | chr7_3:68587080-68587099 | None:intergenic | 40.0% | |
| TCACTTCCTGGTGATCTATT+GGG | - | chr7_3:68587097-68587116 | None:intergenic | 40.0% | |
| TTCACTTCCTGGTGATCTAT+TGG | - | chr7_3:68587098-68587117 | None:intergenic | 40.0% | |
| GGAACGAAAACAAAGAGAAG+CGG | + | chr7_3:68587126-68587145 | Msa1119610:CDS | 40.0% | |
| GGACTTCTCAATGATCTAGA+GGG | + | chr7_3:68587166-68587185 | Msa1119610:CDS | 40.0% | |
| TCTCAATGATCTAGAGGGTT+TGG | + | chr7_3:68587171-68587190 | Msa1119610:CDS | 40.0% | |
| ! | AAGTGAGATTGGCTAACATC+CGG | + | chr7_3:68587392-68587411 | Msa1119610:CDS | 40.0% |
| TGAAGAAGTCGCTAATCTTC+AGG | + | chr7_3:68587477-68587496 | Msa1119610:CDS | 40.0% | |
| ATCTTGTGAACTGGAGAAGA+TGG | + | chr7_3:68587531-68587550 | Msa1119610:CDS | 40.0% | |
| ! | TCTTTTCATATCGTCAAGCC+GGG | - | chr7_3:68587566-68587585 | None:intergenic | 40.0% |
| GGCTTGACGATATGAAAAGA+AGG | + | chr7_3:68587566-68587585 | Msa1119610:CDS | 40.0% | |
| TATGAAAAGAAGGATGTCGG+AGG | + | chr7_3:68587576-68587595 | Msa1119610:CDS | 40.0% | |
| TAAAACTCGACAAGCAGAAG+CGG | + | chr7_3:68587618-68587637 | Msa1119610:CDS | 40.0% | |
| ATTAACTCTGCATAGTGCAG+GGG | - | chr7_3:68587809-68587828 | None:intergenic | 40.0% | |
| GATTAACTCTGCATAGTGCA+GGG | - | chr7_3:68587810-68587829 | None:intergenic | 40.0% | |
| AGATTAACTCTGCATAGTGC+AGG | - | chr7_3:68587811-68587830 | None:intergenic | 40.0% | |
| CTTGAGAGAGACGTTGGAAT+TGG | - | chr7_3:68584482-68584501 | None:intergenic | 45.0% | |
| !! | GGAATGATGGTGGTTTGTTG+TGG | - | chr7_3:68584596-68584615 | None:intergenic | 45.0% |
| AGGAGAATGAGGAATGATGG+TGG | - | chr7_3:68584606-68584625 | None:intergenic | 45.0% | |
| TGAAACTGAGAATGGGGTGA+AGG | - | chr7_3:68584626-68584645 | None:intergenic | 45.0% | |
| !!! | GTGGATTTTTCAGGGGTTGT+TGG | - | chr7_3:68584650-68584669 | None:intergenic | 45.0% |
| !! | GGGTAAGGAGTGGATTTTTC+AGG | - | chr7_3:68584659-68584678 | None:intergenic | 45.0% |
| TAGATTTGGAGGGTAAGGAG+TGG | - | chr7_3:68584669-68584688 | None:intergenic | 45.0% | |
| ATGCAGATATGGTGTCCTTG+CGG | + | chr7_3:68584704-68584723 | Msa1119610:CDS | 45.0% | |
| GACGTTGCAAATCAGTCTCA+TGG | - | chr7_3:68584950-68584969 | None:intergenic | 45.0% | |
| CTAAGCTTGGCATGTGTCTA+GGG | - | chr7_3:68585492-68585511 | None:intergenic | 45.0% | |
| ACTAAGCTTGGCATGTGTCT+AGG | - | chr7_3:68585493-68585512 | None:intergenic | 45.0% | |
| !! | TTCTGAAACACGGTAACCAC+AGG | - | chr7_3:68585843-68585862 | None:intergenic | 45.0% |
| ACGATGCTTGTGTTATCGAC+TGG | - | chr7_3:68585899-68585918 | None:intergenic | 45.0% | |
| ATCTGCTTGCTTTGTCGGTA+AGG | - | chr7_3:68585923-68585942 | None:intergenic | 45.0% | |
| GAGAGATCTGCTTGCTTTGT+CGG | - | chr7_3:68585928-68585947 | None:intergenic | 45.0% | |
| CTGACTAATGACTTCGCTGA+GGG | + | chr7_3:68585995-68586014 | Msa1119610:CDS | 45.0% | |
| ! | TTCTGAGAATCCTTCACCTG+TGG | + | chr7_3:68586063-68586082 | Msa1119610:CDS | 45.0% |
| ! | GCTGTATCTGAGATTCCTGA+GGG | + | chr7_3:68586085-68586104 | Msa1119610:CDS | 45.0% |
| ATTCCTGAGGGAAAAAGCAG+AGG | + | chr7_3:68586097-68586116 | Msa1119610:CDS | 45.0% | |
| !! | TGTCGACAACTGGTCTTTGA+GGG | - | chr7_3:68586250-68586269 | None:intergenic | 45.0% |
| AAATACGCTCTGTCGACAAC+TGG | - | chr7_3:68586260-68586279 | None:intergenic | 45.0% | |
| TTGTCGACAGAGCGTATTTC+AGG | + | chr7_3:68586261-68586280 | Msa1119610:CDS | 45.0% | |
| TGTCGACAGAGCGTATTTCA+GGG | + | chr7_3:68586262-68586281 | Msa1119610:CDS | 45.0% | |
| TGATTGGAAAGACCTGGGAT+TGG | - | chr7_3:68586446-68586465 | None:intergenic | 45.0% | |
| !! | TCTTGTCCAATGGCTTGGTT+AGG | + | chr7_3:68586783-68586802 | Msa1119610:intron | 45.0% |
| !! | GAAAGCTGGGTGCATTGATT+AGG | - | chr7_3:68587058-68587077 | None:intergenic | 45.0% |
| CACTTCCTGGTGATCTATTG+GGG | - | chr7_3:68587096-68587115 | None:intergenic | 45.0% | |
| ACCAGGAAGTGAACAGCTAA+AGG | + | chr7_3:68587105-68587124 | Msa1119610:CDS | 45.0% | |
| TCCTTTAGCTGTTCACTTCC+TGG | - | chr7_3:68587109-68587128 | None:intergenic | 45.0% | |
| AGCGGTGATATTTATGCAGC+AGG | + | chr7_3:68587144-68587163 | Msa1119610:CDS | 45.0% | |
| GCGGTGATATTTATGCAGCA+GGG | + | chr7_3:68587145-68587164 | Msa1119610:CDS | 45.0% | |
| GGGACTTCTCAATGATCTAG+AGG | + | chr7_3:68587165-68587184 | Msa1119610:CDS | 45.0% | |
| GGCAGAAATTGACAAGTCCA+TGG | + | chr7_3:68587321-68587340 | Msa1119610:CDS | 45.0% | |
| ! | CAGAGTAGGCGAATTTTCCA+TGG | - | chr7_3:68587341-68587360 | None:intergenic | 45.0% |
| CATGGAAAATTCGCCTACTC+TGG | + | chr7_3:68587339-68587358 | Msa1119610:CDS | 45.0% | |
| TTAATGTGCTCCTCCAGAGT+AGG | - | chr7_3:68587355-68587374 | None:intergenic | 45.0% | |
| AGAGGAGGAGAAAGTGAGAT+TGG | + | chr7_3:68587381-68587400 | Msa1119610:CDS | 45.0% | |
| ! | AGTGAGATTGGCTAACATCC+GGG | + | chr7_3:68587393-68587412 | Msa1119610:CDS | 45.0% |
| CAATCTTCACACAGTCATCC+CGG | - | chr7_3:68587414-68587433 | None:intergenic | 45.0% | |
| TTGTGAACTGGAGAAGATGG+AGG | + | chr7_3:68587534-68587553 | Msa1119610:CDS | 45.0% | |
| AACGTGCGTTGGAAAAGTAG+TGG | + | chr7_3:68587707-68587726 | Msa1119610:CDS | 45.0% | |
| GAAGAGCTTGAGAGAGACGT+TGG | - | chr7_3:68584488-68584507 | None:intergenic | 50.0% | |
| GAATGGGGTGAAGGAGAATG+AGG | - | chr7_3:68584617-68584636 | None:intergenic | 50.0% | |
| ATATGGTGTCCTTGCGGTCA+TGG | + | chr7_3:68584710-68584729 | Msa1119610:CDS | 50.0% | |
| CCAGCAAGACATTGACACTC+AGG | - | chr7_3:68584987-68585006 | None:intergenic | 50.0% | |
| CCTGAGTGTCAATGTCTTGC+TGG | + | chr7_3:68584984-68585003 | Msa1119610:CDS | 50.0% | |
| CAATGTCGCAATCTAGACGG+CGG | + | chr7_3:68585381-68585400 | Msa1119610:intron | 50.0% | |
| AAACAGGGTCATGGATCCTG+TGG | + | chr7_3:68585824-68585843 | Msa1119610:intron | 50.0% | |
| !! | GGAGACCAAGTTGATACAGC+TGG | + | chr7_3:68585965-68585984 | Msa1119610:CDS | 50.0% |
| CGTTGCCAGCTGTATCAACT+TGG | - | chr7_3:68585973-68585992 | None:intergenic | 50.0% | |
| CCTCAGCGAAGTCATTAGTC+AGG | - | chr7_3:68585997-68586016 | None:intergenic | 50.0% | |
| CCTGACTAATGACTTCGCTG+AGG | + | chr7_3:68585994-68586013 | Msa1119610:CDS | 50.0% | |
| TCAGATACAGCCACAGGTGA+AGG | - | chr7_3:68586076-68586095 | None:intergenic | 50.0% | |
| GGAATCTCAGATACAGCCAC+AGG | - | chr7_3:68586082-68586101 | None:intergenic | 50.0% | |
| ! | GGCTGTATCTGAGATTCCTG+AGG | + | chr7_3:68586084-68586103 | Msa1119610:CDS | 50.0% |
| !!! | GATCCTCTGCTTTTTCCCTC+AGG | - | chr7_3:68586103-68586122 | None:intergenic | 50.0% |
| AAGCAGAGGATCACCAACAG+AGG | + | chr7_3:68586111-68586130 | Msa1119610:CDS | 50.0% | |
| !! | CTGTCGACAACTGGTCTTTG+AGG | - | chr7_3:68586251-68586270 | None:intergenic | 50.0% |
| GTCGACAGAGCGTATTTCAG+GGG | + | chr7_3:68586263-68586282 | Msa1119610:CDS | 50.0% | |
| TCGACAGAGCGTATTTCAGG+GGG | + | chr7_3:68586264-68586283 | Msa1119610:CDS | 50.0% | |
| CTTGCGGTGAAAGTAGAAGC+AGG | - | chr7_3:68586384-68586403 | None:intergenic | 50.0% | |
| CTGCTTCTACTTTCACCGCA+AGG | + | chr7_3:68586382-68586401 | Msa1119610:intron | 50.0% | |
| CAGGTTCTTGTCCAATGGCT+TGG | + | chr7_3:68586778-68586797 | Msa1119610:intron | 50.0% | |
| GTAAGCCCCAATAGATCACC+AGG | + | chr7_3:68587088-68587107 | Msa1119610:CDS | 50.0% | |
| TGTCTCTCATAGACTCGTGC+TGG | - | chr7_3:68587204-68587223 | None:intergenic | 50.0% | |
| GGAAAATTCGCCTACTCTGG+AGG | + | chr7_3:68587342-68587361 | Msa1119610:CDS | 50.0% | |
| AGAAGATGGAGGAAGAGACC+CGG | + | chr7_3:68587545-68587564 | Msa1119610:CDS | 50.0% | |
| AGACAGACACCATGACCGCA+AGG | - | chr7_3:68584722-68584741 | None:intergenic | 55.0% | |
| CGCGGTCATGTTGAGATCCT+CGG | + | chr7_3:68585261-68585280 | Msa1119610:intron | 55.0% | |
| AACGTGAGGTGGGGGTGAAT+TGG | + | chr7_3:68585550-68585569 | Msa1119610:intron | 55.0% | |
| AGGCGACCTAACCAAGCCAT+TGG | - | chr7_3:68586792-68586811 | None:intergenic | 55.0% | |
| AGTTGCAGCCAAGACAGCAC+TGG | + | chr7_3:68587675-68587694 | Msa1119610:CDS | 55.0% | |
| ! | AGCCAAGACAGCACTGGAGA+AGG | + | chr7_3:68587681-68587700 | Msa1119610:CDS | 55.0% |
| AGCCTTCTCCAGTGCTGTCT+TGG | - | chr7_3:68587686-68587705 | None:intergenic | 55.0% | |
| GGAGAAGGCTAAACGTGCGT+TGG | + | chr7_3:68587696-68587715 | Msa1119610:CDS | 55.0% | |
| AACTCTGCATAGTGCAGGGG+TGG | - | chr7_3:68587806-68587825 | None:intergenic | 55.0% | |
| TAGTACTGTCGCAGCGACGC+AGG | - | chr7_3:68584357-68584376 | None:intergenic | 60.0% | |
| CGCAATCTAGACGGCGGTTC+TGG | + | chr7_3:68585387-68585406 | Msa1119610:intron | 60.0% | |
| CTCGACAAGCAGAAGCGGCA+AGG | + | chr7_3:68587623-68587642 | Msa1119610:CDS | 60.0% | |
| CGACGCAGGTCGCACGGTGA+AGG | - | chr7_3:68584343-68584362 | None:intergenic | 70.0% | |
| TCGCAGCGACGCAGGTCGCA+CGG | - | chr7_3:68584349-68584368 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 68584302 | 68587985 | 68584302 | ID=Msa1119610;Name=Msa1119610 |
| chr7_3 | mRNA | 68584302 | 68587985 | 68584302 | ID=Msa1119610-mRNA-1;Parent=Msa1119610;Name=Msa1119610-mRNA-1;_AED=0.02;_eAED=0.02;_QI=168|1|1|1|1|0.75|4|259|580 |
| chr7_3 | exon | 68584302 | 68584805 | 68584302 | ID=Msa1119610-mRNA-1:exon:17171;Parent=Msa1119610-mRNA-1 |
| chr7_3 | exon | 68584906 | 68585064 | 68584906 | ID=Msa1119610-mRNA-1:exon:17172;Parent=Msa1119610-mRNA-1 |
| chr7_3 | exon | 68585830 | 68586313 | 68585830 | ID=Msa1119610-mRNA-1:exon:17173;Parent=Msa1119610-mRNA-1 |
| chr7_3 | exon | 68586963 | 68587985 | 68586963 | ID=Msa1119610-mRNA-1:exon:17174;Parent=Msa1119610-mRNA-1 |
| chr7_3 | five_prime_UTR | 68584302 | 68584469 | 68584302 | ID=Msa1119610-mRNA-1:five_prime_utr;Parent=Msa1119610-mRNA-1 |
| chr7_3 | CDS | 68584470 | 68584805 | 68584470 | ID=Msa1119610-mRNA-1:cds;Parent=Msa1119610-mRNA-1 |
| chr7_3 | CDS | 68584906 | 68585064 | 68584906 | ID=Msa1119610-mRNA-1:cds;Parent=Msa1119610-mRNA-1 |
| chr7_3 | CDS | 68585830 | 68586313 | 68585830 | ID=Msa1119610-mRNA-1:cds;Parent=Msa1119610-mRNA-1 |
| chr7_3 | CDS | 68586963 | 68587726 | 68586963 | ID=Msa1119610-mRNA-1:cds;Parent=Msa1119610-mRNA-1 |
| chr7_3 | three_prime_UTR | 68587727 | 68587985 | 68587727 | ID=Msa1119610-mRNA-1:three_prime_utr;Parent=Msa1119610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
