Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070210 | XP_024625451.1 | 80.645 | 620 | 75 | 4 | 1 | 575 | 1 | 620 | 0.0 | 986 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070210 | A0A396H208 | 80.645 | 620 | 75 | 4 | 1 | 575 | 1 | 620 | 0.0 | 986 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0382740 | Msa1070210 | 0.800653 | 1.302929e-48 | -8.615850e-47 |
| Msa0382770 | Msa1070210 | 0.808238 | 3.417310e-50 | -8.615850e-47 |
| Msa1070210 | Msa1078970 | 0.815256 | 1.014550e-51 | -8.615850e-47 |
| Msa1070210 | Msa1119610 | 0.909611 | 4.701803e-82 | -8.615850e-47 |
| Msa0524800 | Msa1070210 | 0.800198 | 1.612896e-48 | -8.615850e-47 |
| Msa0525000 | Msa1070210 | 0.801987 | 6.947026e-49 | -8.615850e-47 |
| Msa0563940 | Msa1070210 | 0.812932 | 3.305020e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070210 | MtrunA17_Chr7g0252421 | 80.645 | 620 | 75 | 4 | 1 | 575 | 1 | 620 | 0.0 | 986 |
| Msa1070210 | MtrunA17_Chr7g0252431 | 63.333 | 540 | 116 | 8 | 35 | 534 | 1 | 498 | 0.0 | 631 |
| Msa1070210 | MtrunA17_Chr2g0316801 | 53.448 | 116 | 53 | 1 | 459 | 574 | 68 | 182 | 6.98e-28 | 110 |
| Msa1070210 | MtrunA17_Chr4g0042601 | 37.168 | 113 | 34 | 3 | 64 | 142 | 10 | 119 | 6.44e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070210 | AT5G13920.1 | 42.857 | 112 | 60 | 3 | 79 | 188 | 37 | 146 | 6.92e-22 | 99.0 |
| Msa1070210 | AT5G13920.2 | 42.857 | 112 | 60 | 3 | 79 | 188 | 37 | 146 | 1.22e-21 | 98.6 |
| Msa1070210 | AT1G54930.2 | 39.823 | 113 | 53 | 5 | 79 | 184 | 38 | 142 | 2.60e-15 | 78.6 |
| Msa1070210 | AT3G42860.1 | 36.792 | 106 | 49 | 4 | 81 | 170 | 96 | 199 | 2.85e-12 | 68.9 |
Find 138 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTCCTCCCATAGTTATT+TGG | 0.187096 | 7_2:+66145617 | None:intergenic |
| TTCACTTCCTGGTGATCTAT+TGG | 0.189914 | 7_2:+66143282 | None:intergenic |
| TCCTTTAGCTGTTCACTTCC+TGG | 0.216962 | 7_2:+66143271 | None:intergenic |
| TTGTCGACAGAGCGTATTTC+AGG | 0.217309 | 7_2:-66144114 | Msa1070210:CDS |
| AAAACATCATACCTGTTTAA+TGG | 0.218571 | 7_2:+66145321 | None:intergenic |
| TCACTTCCTGGTGATCTATT+GGG | 0.222828 | 7_2:+66143283 | None:intergenic |
| TTTCCCAAGGATAATCCTTT+TGG | 0.268590 | 7_2:+66142472 | None:intergenic |
| GCTCATACTCCAAATAACTA+TGG | 0.290254 | 7_2:-66145626 | Msa1070210:CDS |
| TGAAGAGTACTCGTTTGTTT+TGG | 0.318646 | 7_2:+66143382 | None:intergenic |
| TCTCAATGATCTAGAGGGTT+TGG | 0.330384 | 7_2:-66143206 | Msa1070210:CDS |
| CGTTGAAGAAAGTTTAGATT+TGG | 0.331795 | 7_2:+66145698 | None:intergenic |
| CCTGAGTGTCAATGTCTTGC+TGG | 0.341031 | 7_2:-66145391 | Msa1070210:CDS |
| GTTTCAATCATTTGATCCTA+TGG | 0.343262 | 7_2:-66143410 | Msa1070210:CDS |
| AAACATCATACCTGTTTAAT+GGG | 0.343581 | 7_2:+66145322 | None:intergenic |
| GAGAGATCTGCTTGCTTTGT+CGG | 0.349424 | 7_2:+66144450 | None:intergenic |
| TTCTTCAACGAATGCAGATA+TGG | 0.362912 | 7_2:-66145685 | Msa1070210:CDS |
| ATTTCTGCTGATGCATCATT+TGG | 0.366884 | 7_2:-66144083 | Msa1070210:intron |
| AAGTTTAGATTTGGAGGGTA+AGG | 0.372144 | 7_2:+66145707 | None:intergenic |
| CATCAATCATGCCAAGTCTA+TGG | 0.378809 | 7_2:-66143077 | Msa1070210:CDS |
| ATCCTGTGGTTACCGTGTTT+CGG | 0.379808 | 7_2:-66144537 | Msa1070210:CDS |
| AGCCTTCTCCAGTGCTGTCT+TGG | 0.381438 | 7_2:+66142694 | None:intergenic |
| CTTGAGAGAGACGTTGGAAT+TGG | 0.387762 | 7_2:+66145893 | None:intergenic |
| ATCTATAATGTGTTATTAGT+AGG | 0.397396 | 7_2:-66142540 | Msa1070210:three_prime_UTR |
| TACATCACTGTGTAAATTAG+TGG | 0.401465 | 7_2:+66146063 | None:intergenic |
| TGAAGAAGTCGCTAATCTTC+AGG | 0.402805 | 7_2:-66142900 | Msa1070210:CDS |
| ATTGGGGCTTACTACATTTG+TGG | 0.412109 | 7_2:+66143300 | None:intergenic |
| GGAGCACATTAAATTCTTAG+AGG | 0.431027 | 7_2:-66143014 | Msa1070210:CDS |
| ATCTGCTTGCTTTGTCGGTA+AGG | 0.434008 | 7_2:+66144455 | None:intergenic |
| TTCTCCAAAAGGATTATCCT+TGG | 0.434174 | 7_2:-66142476 | Msa1070210:three_prime_UTR |
| AGAGTTGAAATCTTGTGAAC+TGG | 0.435454 | 7_2:-66142855 | Msa1070210:CDS |
| CTGTCGACAACTGGTCTTTG+AGG | 0.436550 | 7_2:+66144127 | None:intergenic |
| GTCAATTTCTGCCATAGACT+TGG | 0.447175 | 7_2:+66143066 | None:intergenic |
| TTACTACATTTGTGGAAAGC+TGG | 0.448068 | 7_2:+66143308 | None:intergenic |
| TAAACAATTTAACACTGAAA+AGG | 0.453558 | 7_2:+66143141 | None:intergenic |
| CATGGAAAATTCGCCTACTC+TGG | 0.455767 | 7_2:-66143038 | Msa1070210:CDS |
| AGCGGTGATATTTATGCAGC+AGG | 0.459863 | 7_2:-66143233 | Msa1070210:CDS |
| ATGAGATGATAGAGAAGCTT+CGG | 0.460418 | 7_2:+66144160 | None:intergenic |
| TACTACATTTGTGGAAAGCT+GGG | 0.461766 | 7_2:+66143309 | None:intergenic |
| CACTTCCTGGTGATCTATTG+GGG | 0.464562 | 7_2:+66143284 | None:intergenic |
| AAATACGCTCTGTCGACAAC+TGG | 0.468375 | 7_2:+66144118 | None:intergenic |
| CTTTACATGTCCCATCAGAT+TGG | 0.471970 | 7_2:-66145594 | Msa1070210:intron |
| TCTGCATAGTGCAGGGGTGG+TGG | 0.473554 | 7_2:+66142577 | None:intergenic |
| TGAAGAAAGTTTAGATTTGG+AGG | 0.477260 | 7_2:+66145701 | None:intergenic |
| GAAAGCTGGGTGCATTGATT+AGG | 0.478504 | 7_2:+66143322 | None:intergenic |
| AGAGGTGGAGAAAGTGAGAT+TGG | 0.481512 | 7_2:-66142996 | Msa1070210:CDS |
| AAGTGAGATTGGCTAACATC+CGG | 0.482030 | 7_2:-66142985 | Msa1070210:CDS |
| TGTTGGATGAAACTGAGAAT+GGG | 0.485353 | 7_2:+66145748 | None:intergenic |
| TGTCGACAACTGGTCTTTGA+GGG | 0.487261 | 7_2:+66144128 | None:intergenic |
| AGTTGCAGCCAAGACAGCAC+TGG | 0.488091 | 7_2:-66142702 | Msa1070210:CDS |
| TGTGAATTATCTTCCTCTGT+TGG | 0.489986 | 7_2:+66144251 | None:intergenic |
| ACTAATTTACACAGTGATGT+AGG | 0.494217 | 7_2:-66146061 | Msa1070210:five_prime_UTR |
| TCTCCAAAAGGATTATCCTT+GGG | 0.497217 | 7_2:-66142475 | Msa1070210:three_prime_UTR |
| AGATTAACTCTGCATAGTGC+AGG | 0.497519 | 7_2:+66142569 | None:intergenic |
| CTAATTTACACAGTGATGTA+GGG | 0.499649 | 7_2:-66146060 | Msa1070210:five_prime_UTR |
| CTAATAACACATTATAGATA+AGG | 0.500295 | 7_2:+66142544 | None:intergenic |
| ATCTTGTGAACTGGAGAAGA+TGG | 0.500732 | 7_2:-66142846 | Msa1070210:CDS |
| GATAGACTTAGTTGCAATTG+AGG | 0.502431 | 7_2:-66144183 | Msa1070210:CDS |
| ATGTAACAATGTTCTCCAAA+AGG | 0.502747 | 7_2:-66142487 | Msa1070210:three_prime_UTR |
| ATATGGTGTCCTTGCGGTCA+TGG | 0.508748 | 7_2:-66145668 | Msa1070210:CDS |
| ACCAGGAAGTGAACAGCTAA+AGG | 0.511344 | 7_2:-66143272 | Msa1070210:CDS |
| CTCTCGCAATGAATATATTG+AGG | 0.512247 | 7_2:-66144432 | Msa1070210:CDS |
| GACGTTGCAAATCAGTCTCA+TGG | 0.521285 | 7_2:+66145428 | None:intergenic |
| TAGATTTGGAGGGTAAGGAG+TGG | 0.525323 | 7_2:+66145712 | None:intergenic |
| GAAGAGCTTGAGAGAGACGT+TGG | 0.531011 | 7_2:+66145887 | None:intergenic |
| AGTGAGATTGGCTAACATCC+GGG | 0.531581 | 7_2:-66142984 | Msa1070210:CDS |
| CCTCAGCGAAGTCATTAGTC+AGG | 0.536242 | 7_2:+66144381 | None:intergenic |
| ACGATGCTTGTGTTATCGAC+TGG | 0.536824 | 7_2:+66144479 | None:intergenic |
| ATTGATATCAAACAGGGTCA+TGG | 0.537624 | 7_2:-66144560 | Msa1070210:intron |
| TTGTTGGATGAAACTGAGAA+TGG | 0.539408 | 7_2:+66145747 | None:intergenic |
| CGTTGCCAGCTGTATCAACT+TGG | 0.539514 | 7_2:+66144405 | None:intergenic |
| GCACATTAAATTCTTAGAGG+TGG | 0.539719 | 7_2:-66143011 | Msa1070210:CDS |
| CTCATACTCCAAATAACTAT+GGG | 0.546444 | 7_2:-66145625 | Msa1070210:CDS |
| CAATCTTCACACAGTCATCC+CGG | 0.546682 | 7_2:+66142966 | None:intergenic |
| TGTCTCTCATAGACTCGTGC+TGG | 0.547080 | 7_2:+66143176 | None:intergenic |
| TGTCGACAGAGCGTATTTCA+GGG | 0.547872 | 7_2:-66144113 | Msa1070210:CDS |
| GGCAGAAATTGACAAGTCCA+TGG | 0.550972 | 7_2:-66143056 | Msa1070210:CDS |
| CTAGTAACATACCAATCTGA+TGG | 0.551204 | 7_2:+66145583 | None:intergenic |
| GGAGACCAAGTTGATACAGC+TGG | 0.551737 | 7_2:-66144410 | Msa1070210:CDS |
| TGAAGGAGAATGAGGAATGA+TGG | 0.551786 | 7_2:+66145772 | None:intergenic |
| TCAGATACAGCCACAGGTGA+AGG | 0.551842 | 7_2:+66144302 | None:intergenic |
| GAAGAAAGTTTAGATTTGGA+GGG | 0.553211 | 7_2:+66145702 | None:intergenic |
| GAATGGGGTGAAGGAGAATG+AGG | 0.553661 | 7_2:+66145764 | None:intergenic |
| GGAATGATGGTGGTTTGTTG+TGG | 0.558071 | 7_2:+66145785 | None:intergenic |
| TCTCGCAATGAATATATTGA+GGG | 0.558285 | 7_2:-66144431 | Msa1070210:CDS |
| GGAGAAGGCTAAACGTGCGT+TGG | 0.565325 | 7_2:-66142681 | Msa1070210:CDS |
| GTTTCGTTGTTCTTCAACAG+CGG | 0.566970 | 7_2:+66145856 | None:intergenic |
| CGACGCAGGTCGCACGGTGA+AGG | 0.567792 | 7_2:+66146032 | None:intergenic |
| AGCCAAGACAGCACTGGAGA+AGG | 0.568562 | 7_2:-66142696 | Msa1070210:CDS |
| CTCGACAAGCAGAAGCGGCA+AGG | 0.570546 | 7_2:-66142754 | Msa1070210:CDS |
| AACTCTGCATAGTGCAGGGG+TGG | 0.571163 | 7_2:+66142574 | None:intergenic |
| TTCCGAAACACGGTAACCAC+AGG | 0.572644 | 7_2:+66144535 | None:intergenic |
| GGGACTTCTCAATGATCTAG+AGG | 0.573353 | 7_2:-66143212 | Msa1070210:CDS |
| TCTTGTTAGGGTAAACCTTG+TGG | 0.574221 | 7_2:-66145478 | Msa1070210:intron |
| GTAAGCCCCAATAGATCACC+AGG | 0.584261 | 7_2:-66143289 | Msa1070210:CDS |
| ACAATTTAACACTGAAAAGG+CGG | 0.584452 | 7_2:+66143144 | None:intergenic |
| CGATATGAAAAGAAGGATGT+CGG | 0.589160 | 7_2:-66142804 | Msa1070210:CDS |
| TGAAACTGAGAATGGGGTGA+AGG | 0.592296 | 7_2:+66145755 | None:intergenic |
| GATTAACTCTGCATAGTGCA+GGG | 0.593929 | 7_2:+66142570 | None:intergenic |
| GGCTTGACGATATGAAAAGA+AGG | 0.596025 | 7_2:-66142811 | Msa1070210:CDS |
| TTCTGAGAATCCTTCACCTG+TGG | 0.597324 | 7_2:-66144312 | Msa1070210:CDS |
| GGAAAATTCGCCTACTCTGG+AGG | 0.597939 | 7_2:-66143035 | Msa1070210:CDS |
| TAAAACTCGACAAGCAGAAG+CGG | 0.600390 | 7_2:-66142759 | Msa1070210:CDS |
| CCAGCAAGACATTGACACTC+AGG | 0.603118 | 7_2:+66145391 | None:intergenic |
| AGAAGATGGAGGAAGAGACC+CGG | 0.604595 | 7_2:-66142832 | Msa1070210:CDS |
| GGAATCTCAGATACAGCCAC+AGG | 0.604606 | 7_2:+66144296 | None:intergenic |
| TAGTACTGTCGCAGCGACGC+AGG | 0.605913 | 7_2:+66146018 | None:intergenic |
| TAGTAACATACCAATCTGAT+GGG | 0.607557 | 7_2:+66145584 | None:intergenic |
| AGACAGACACCATGACCGCA+AGG | 0.613283 | 7_2:+66145659 | None:intergenic |
| TTAATGTGCTCCTCCAGAGT+AGG | 0.616939 | 7_2:+66143025 | None:intergenic |
| CACCACTTAAAATTACCACA+AGG | 0.620970 | 7_2:+66145463 | None:intergenic |
| GAAGTTCATCTTCCGAAACA+CGG | 0.621723 | 7_2:+66144525 | None:intergenic |
| ATAGTTATTTGGAGTATGAG+CGG | 0.622038 | 7_2:+66145628 | None:intergenic |
| GTCGACAGAGCGTATTTCAG+GGG | 0.622969 | 7_2:-66144112 | Msa1070210:CDS |
| ATACTCCAAATAACTATGGG+AGG | 0.623595 | 7_2:-66145622 | Msa1070210:CDS |
| CTGACTAATGACTTCGCTGA+GGG | 0.625887 | 7_2:-66144380 | Msa1070210:CDS |
| AACGTGCGTTGGAAAAGTAG+TGG | 0.626649 | 7_2:-66142670 | Msa1070210:exon |
| AGAACAGAAGATAGGGAACA+AGG | 0.626967 | 7_2:+66142401 | None:intergenic |
| GGCTGTATCTGAGATTCCTG+AGG | 0.627996 | 7_2:-66144291 | Msa1070210:CDS |
| GGACTTCTCAATGATCTAGA+GGG | 0.629522 | 7_2:-66143211 | Msa1070210:CDS |
| TTGCAAATCAGTCTCATGGA+TGG | 0.636503 | 7_2:+66145432 | None:intergenic |
| AAACAGGGTCATGGATCCTG+TGG | 0.637813 | 7_2:-66144551 | Msa1070210:intron |
| GCGGTGATATTTATGCAGCA+GGG | 0.640685 | 7_2:-66143232 | Msa1070210:CDS |
| GACTCTAATAGCAAAAGTCG+AGG | 0.641535 | 7_2:-66145985 | Msa1070210:five_prime_UTR |
| TTGTGAACTGGAGAAGATGG+AGG | 0.645606 | 7_2:-66142843 | Msa1070210:CDS |
| TAATTTACACAGTGATGTAG+GGG | 0.646688 | 7_2:-66146059 | Msa1070210:five_prime_UTR |
| AAGCAGAGGATCACCAACAG+AGG | 0.648823 | 7_2:-66144264 | Msa1070210:CDS |
| GAAGATAATTCACAACCTGA+CGG | 0.651055 | 7_2:-66144242 | Msa1070210:intron |
| GTTGGATGAAACTGAGAATG+GGG | 0.652588 | 7_2:+66145749 | None:intergenic |
| CACTCAGGATAAGTAAACAA+AGG | 0.659044 | 7_2:+66145406 | None:intergenic |
| GGAACGAAAACAAAGAGAAG+CGG | 0.669686 | 7_2:-66143251 | Msa1070210:CDS |
| TCGACAGAGCGTATTTCAGG+GGG | 0.670022 | 7_2:-66144111 | Msa1070210:CDS |
| AGGAGAATGAGGAATGATGG+TGG | 0.676312 | 7_2:+66145775 | None:intergenic |
| ATGCAGATATGGTGTCCTTG+CGG | 0.677815 | 7_2:-66145674 | Msa1070210:CDS |
| ATTAACTCTGCATAGTGCAG+GGG | 0.678423 | 7_2:+66142571 | None:intergenic |
| GCTGTATCTGAGATTCCTGA+GGG | 0.692469 | 7_2:-66144290 | Msa1070210:CDS |
| CCTGACTAATGACTTCGCTG+AGG | 0.704482 | 7_2:-66144381 | Msa1070210:CDS |
| AAAAGGATGAGAATAACAGA+CGG | 0.712163 | 7_2:-66144335 | Msa1070210:CDS |
| TATGAAAAGAAGGATGTCGG+AGG | 0.720927 | 7_2:-66142801 | Msa1070210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGAGAAAAAAAAACA+TGG | + | chr7_2:66142965-66142984 | None:intergenic | 15.0% |
| !!! | TTATTATGTTTTTTCTTGTT+AGG | - | chr7_2:66142991-66143010 | Msa1070210:CDS | 15.0% |
| !!! | TATTATGTTTTTTCTTGTTA+GGG | - | chr7_2:66142992-66143011 | Msa1070210:CDS | 15.0% |
| !! | TATGAAAAATCGAAACTTTA+AGG | + | chr7_2:66142936-66142955 | None:intergenic | 20.0% |
| !! | ACATATACAAAGTAGTTTAA+TGG | + | chr7_2:66143284-66143303 | None:intergenic | 20.0% |
| !!! | GAAGAGTAATTTATTTTTTG+TGG | - | chr7_2:66143759-66143778 | Msa1070210:intron | 20.0% |
| !! | TAATCTTATTGATATCAAAC+AGG | - | chr7_2:66143915-66143934 | Msa1070210:intron | 20.0% |
| !! | AATCTTATTGATATCAAACA+GGG | - | chr7_2:66143916-66143935 | Msa1070210:intron | 20.0% |
| !!! | ATCAAATTAATTTGAACCTA+AGG | - | chr7_2:66144722-66144741 | Msa1070210:intron | 20.0% |
| !! | TAAACAATTTAACACTGAAA+AGG | + | chr7_2:66145344-66145363 | None:intergenic | 20.0% |
| !! | CTAATAACACATTATAGATA+AGG | + | chr7_2:66145941-66145960 | None:intergenic | 20.0% |
| !!! | ATCTATAATGTGTTATTAGT+AGG | - | chr7_2:66145942-66145961 | Msa1070210:five_prime_UTR | 20.0% |
| ! | TGGAGTTTGTAAAAAATTGA+TGG | - | chr7_2:66143111-66143130 | Msa1070210:CDS | 25.0% |
| ! | GTTTGTAAAAAATTGATGGA+AGG | - | chr7_2:66143115-66143134 | Msa1070210:CDS | 25.0% |
| !!! | TTTTATTTGTCCCATTAAAC+AGG | - | chr7_2:66143150-66143169 | Msa1070210:CDS | 25.0% |
| ! | AAACATCATACCTGTTTAAT+GGG | + | chr7_2:66143163-66143182 | None:intergenic | 25.0% |
| ! | AAAACATCATACCTGTTTAA+TGG | + | chr7_2:66143164-66143183 | None:intergenic | 25.0% |
| ! | TGTTTGTTTAGTACCAAATA+AGG | - | chr7_2:66143245-66143264 | Msa1070210:CDS | 25.0% |
| ! | GTTTGTTTAGTACCAAATAA+GGG | - | chr7_2:66143246-66143265 | Msa1070210:CDS | 25.0% |
| !! | TACCAAATAAGGGTTTATTT+TGG | - | chr7_2:66143256-66143275 | Msa1070210:CDS | 25.0% |
| ! | CTACTTTGTATATGTATTGT+TGG | - | chr7_2:66143289-66143308 | Msa1070210:CDS | 25.0% |
| !! | AATTTTACCAATCGCAATTT+TGG | + | chr7_2:66143445-66143464 | None:intergenic | 25.0% |
| !! | TAGTCACAAGTTTTTACAAA+AGG | + | chr7_2:66143521-66143540 | None:intergenic | 25.0% |
| ! | AAGTTGAACATTGCAAATAA+AGG | + | chr7_2:66143623-66143642 | None:intergenic | 25.0% |
| !!! | TGGTACTATTTTCTTTTTTG+TGG | - | chr7_2:66144419-66144438 | Msa1070210:CDS | 25.0% |
| ! | ATTCAAAATGACATAACTTG+CGG | + | chr7_2:66144507-66144526 | None:intergenic | 25.0% |
| ! | TACTAAGTAAAGCAATTGAT+TGG | + | chr7_2:66144569-66144588 | None:intergenic | 25.0% |
| ! | TAATTTGAACCTAAGGAATT+TGG | - | chr7_2:66144729-66144748 | Msa1070210:intron | 25.0% |
| ! | GAGTTGGATGAAAAAAAATA+AGG | + | chr7_2:66144919-66144938 | None:intergenic | 25.0% |
| !! | AACAATTTTCTGACTATGTA+TGG | - | chr7_2:66145377-66145396 | Msa1070210:CDS | 25.0% |
| !! | ACAATTTTCTGACTATGTAT+GGG | - | chr7_2:66145378-66145397 | Msa1070210:CDS | 25.0% |
| !!! | TTGTCGAGTTTTATCTTTTA+AGG | + | chr7_2:66145716-66145735 | None:intergenic | 25.0% |
| !! | AAATTCAGTTGAGATTTTAC+AGG | - | chr7_2:66146031-66146050 | Msa1070210:five_prime_UTR | 25.0% |
| TACATCACTGTGTAAATTAG+TGG | + | chr7_2:66142422-66142441 | None:intergenic | 30.0% | |
| ACTAATTTACACAGTGATGT+AGG | - | chr7_2:66142421-66142440 | Msa1070210:three_prime_UTR | 30.0% | |
| CTAATTTACACAGTGATGTA+GGG | - | chr7_2:66142422-66142441 | Msa1070210:three_prime_UTR | 30.0% | |
| TAATTTACACAGTGATGTAG+GGG | - | chr7_2:66142423-66142442 | Msa1070210:three_prime_UTR | 30.0% | |
| AAGAGAAGAAGAAGAAGAAA+TGG | - | chr7_2:66142663-66142682 | Msa1070210:exon | 30.0% | |
| AGAGAAGAAGAAGAAGAAAT+GGG | - | chr7_2:66142664-66142683 | Msa1070210:exon | 30.0% | |
| GAAGAAAGTTTAGATTTGGA+GGG | + | chr7_2:66142783-66142802 | None:intergenic | 30.0% | |
| TGAAGAAAGTTTAGATTTGG+AGG | + | chr7_2:66142784-66142803 | None:intergenic | 30.0% | |
| CGTTGAAGAAAGTTTAGATT+TGG | + | chr7_2:66142787-66142806 | None:intergenic | 30.0% | |
| ! | ATAGTTATTTGGAGTATGAG+CGG | + | chr7_2:66142857-66142876 | None:intergenic | 30.0% |
| CTCATACTCCAAATAACTAT+GGG | - | chr7_2:66142857-66142876 | Msa1070210:CDS | 30.0% | |
| TAGTAACATACCAATCTGAT+GGG | + | chr7_2:66142901-66142920 | None:intergenic | 30.0% | |
| ! | GAAAAATCGAAACTTTAAGG+TGG | + | chr7_2:66142933-66142952 | None:intergenic | 30.0% |
| ! | AACCTTGTGGTAATTTTAAG+TGG | - | chr7_2:66143017-66143036 | Msa1070210:CDS | 30.0% |
| TGTAAAAAATTGATGGAAGG+AGG | - | chr7_2:66143118-66143137 | Msa1070210:CDS | 30.0% | |
| CACCAAAATAAACCCTTATT+TGG | + | chr7_2:66143261-66143280 | None:intergenic | 30.0% | |
| ! | GATTTAAAACCTTGGTTAGT+GGG | + | chr7_2:66143349-66143368 | None:intergenic | 30.0% |
| ! | GTGTTACATAGTTGTTATTG+CGG | - | chr7_2:66143390-66143409 | Msa1070210:CDS | 30.0% |
| ATTATGACCAAAATTGCGAT+TGG | - | chr7_2:66143435-66143454 | Msa1070210:intron | 30.0% | |
| GTTGAGAATAATTAAACGTG+AGG | - | chr7_2:66143643-66143662 | Msa1070210:intron | 30.0% | |
| AGAATAATTAAACGTGAGGT+GGG | - | chr7_2:66143647-66143666 | Msa1070210:intron | 30.0% | |
| ! | TGAATTGGATTTTCTGTTGA+TGG | - | chr7_2:66143672-66143691 | Msa1070210:intron | 30.0% |
| ATTGTGATCACTGATCAATA+GGG | - | chr7_2:66143709-66143728 | Msa1070210:intron | 30.0% | |
| !!! | TTTTTTGTGGCAATTGTAGT+TGG | - | chr7_2:66143772-66143791 | Msa1070210:intron | 30.0% |
| ! | TTTTTGTGGCAATTGTAGTT+GGG | - | chr7_2:66143773-66143792 | Msa1070210:intron | 30.0% |
| TCTCGCAATGAATATATTGA+GGG | - | chr7_2:66144051-66144070 | Msa1070210:intron | 30.0% | |
| !! | TTTTGCTATCAACGAACAAA+AGG | - | chr7_2:66144130-66144149 | Msa1070210:CDS | 30.0% |
| AAAAGGATGAGAATAACAGA+CGG | - | chr7_2:66144147-66144166 | Msa1070210:CDS | 30.0% | |
| TCATACTCAAACTGAATATC+TGG | + | chr7_2:66144270-66144289 | None:intergenic | 30.0% | |
| ATTGGATGTATAGAGAAGAA+GGG | + | chr7_2:66144535-66144554 | None:intergenic | 30.0% | |
| ATGTTCAGCTATAATGACTT+TGG | + | chr7_2:66144618-66144637 | None:intergenic | 30.0% | |
| GTCATTATAGCTGAACATAT+AGG | - | chr7_2:66144620-66144639 | Msa1070210:intron | 30.0% | |
| ATAACACAACCAAATTCCTT+AGG | + | chr7_2:66144741-66144760 | None:intergenic | 30.0% | |
| ATCAAGAGAATTTCCACATA+TGG | + | chr7_2:66144858-66144877 | None:intergenic | 30.0% | |
| AATTCTCTTGATCTTATTGC+AGG | - | chr7_2:66144866-66144885 | Msa1070210:intron | 30.0% | |
| AAAAATAGCTTAGGTGTGTA+GGG | + | chr7_2:66144953-66144972 | None:intergenic | 30.0% | |
| TAACAGCAGAAAAATAGCTT+AGG | + | chr7_2:66144962-66144981 | None:intergenic | 30.0% | |
| !! | CTATTTTTCTGCTGTTAGTA+TGG | - | chr7_2:66144965-66144984 | Msa1070210:intron | 30.0% |
| CACACAAACAAATGATATCA+AGG | + | chr7_2:66144994-66145013 | None:intergenic | 30.0% | |
| TGAAACATACCTGTAATGAT+GGG | + | chr7_2:66145058-66145077 | None:intergenic | 30.0% | |
| TTGAAACATACCTGTAATGA+TGG | + | chr7_2:66145059-66145078 | None:intergenic | 30.0% | |
| GTTTCAATCATTTGATCCTA+TGG | - | chr7_2:66145072-66145091 | Msa1070210:intron | 30.0% | |
| ACAATTTAACACTGAAAAGG+CGG | + | chr7_2:66145341-66145360 | None:intergenic | 30.0% | |
| ATGTAACAATGTTCTCCAAA+AGG | - | chr7_2:66145995-66146014 | Msa1070210:five_prime_UTR | 30.0% | |
| !!! | TCGACTTTTGCTATTAGAGT+CGG | + | chr7_2:66142498-66142517 | None:intergenic | 35.0% |
| GAGAAGAAGAAGAAGAAATG+GGG | - | chr7_2:66142665-66142684 | Msa1070210:exon | 35.0% | |
| TGTTGGATGAAACTGAGAAT+GGG | + | chr7_2:66142737-66142756 | None:intergenic | 35.0% | |
| TTGTTGGATGAAACTGAGAA+TGG | + | chr7_2:66142738-66142757 | None:intergenic | 35.0% | |
| AAGTTTAGATTTGGAGGGTA+AGG | + | chr7_2:66142778-66142797 | None:intergenic | 35.0% | |
| TTCTTCAACGAATGCAGATA+TGG | - | chr7_2:66142797-66142816 | Msa1070210:CDS | 35.0% | |
| GCTCATACTCCAAATAACTA+TGG | - | chr7_2:66142856-66142875 | Msa1070210:CDS | 35.0% | |
| ATACTCCAAATAACTATGGG+AGG | - | chr7_2:66142860-66142879 | Msa1070210:CDS | 35.0% | |
| AACTTCCTCCCATAGTTATT+TGG | + | chr7_2:66142868-66142887 | None:intergenic | 35.0% | |
| CTAGTAACATACCAATCTGA+TGG | + | chr7_2:66142902-66142921 | None:intergenic | 35.0% | |
| CACCACTTAAAATTACCACA+AGG | + | chr7_2:66143022-66143041 | None:intergenic | 35.0% | |
| CACTCAGGATAAGTAAACAA+AGG | + | chr7_2:66143079-66143098 | None:intergenic | 35.0% | |
| ! | CGATTTAAAACCTTGGTTAG+TGG | + | chr7_2:66143350-66143369 | None:intergenic | 35.0% |
| !!! | CTAACCAAGGTTTTAAATCG+CGG | - | chr7_2:66143350-66143369 | Msa1070210:CDS | 35.0% |
| ATAACAACTATGTAACACCG+AGG | + | chr7_2:66143388-66143407 | None:intergenic | 35.0% | |
| TGCAAATAAAGGACTAAGCT+TGG | + | chr7_2:66143612-66143631 | None:intergenic | 35.0% | |
| GAGAATAATTAAACGTGAGG+TGG | - | chr7_2:66143646-66143665 | Msa1070210:intron | 35.0% | |
| GAATAATTAAACGTGAGGTG+GGG | - | chr7_2:66143648-66143667 | Msa1070210:intron | 35.0% | |
| AATAATTAAACGTGAGGTGG+GGG | - | chr7_2:66143649-66143668 | Msa1070210:intron | 35.0% | |
| GATTGTGATCACTGATCAAT+AGG | - | chr7_2:66143708-66143727 | Msa1070210:intron | 35.0% | |
| CAAAACAAATTCTACAGAGC+AGG | + | chr7_2:66143863-66143882 | None:intergenic | 35.0% | |
| !! | CTGCTCTGTAGAATTTGTTT+TGG | - | chr7_2:66143861-66143880 | Msa1070210:intron | 35.0% |
| !!! | AGAATTTGTTTTGGTCTACC+AGG | - | chr7_2:66143870-66143889 | Msa1070210:intron | 35.0% |
| TACGCATAATGAATAGATCC+TGG | + | chr7_2:66143891-66143910 | None:intergenic | 35.0% | |
| ATTGATATCAAACAGGGTCA+TGG | - | chr7_2:66143922-66143941 | Msa1070210:intron | 35.0% | |
| CTCTCGCAATGAATATATTG+AGG | - | chr7_2:66144050-66144069 | Msa1070210:intron | 35.0% | |
| TGTGAATTATCTTCCTCTGT+TGG | + | chr7_2:66144234-66144253 | None:intergenic | 35.0% | |
| GAAGATAATTCACAACCTGA+CGG | - | chr7_2:66144240-66144259 | Msa1070210:intron | 35.0% | |
| GATAGACTTAGTTGCAATTG+AGG | - | chr7_2:66144299-66144318 | Msa1070210:CDS | 35.0% | |
| ATGAGATGATAGAGAAGCTT+CGG | + | chr7_2:66144325-66144344 | None:intergenic | 35.0% | |
| ATTTCTGCTGATGCATCATT+TGG | - | chr7_2:66144399-66144418 | Msa1070210:CDS | 35.0% | |
| GATTGGATGTATAGAGAAGA+AGG | + | chr7_2:66144536-66144555 | None:intergenic | 35.0% | |
| GTAACTCGAAATGACGTTTA+AGG | + | chr7_2:66144701-66144720 | None:intergenic | 35.0% | |
| TTTAGTAGAGAAGCCATATG+TGG | - | chr7_2:66144842-66144861 | Msa1070210:intron | 35.0% | |
| TAGGGGATTTCAAATTGAGT+TGG | + | chr7_2:66144935-66144954 | None:intergenic | 35.0% | |
| AAAATAGCTTAGGTGTGTAG+GGG | + | chr7_2:66144952-66144971 | None:intergenic | 35.0% | |
| GAAAAATAGCTTAGGTGTGT+AGG | + | chr7_2:66144954-66144973 | None:intergenic | 35.0% | |
| TGAATAATGCAAAGCCAAAG+AGG | + | chr7_2:66145021-66145040 | None:intergenic | 35.0% | |
| ! | TTTTTGTCTCCCATCATTAC+AGG | - | chr7_2:66145046-66145065 | Msa1070210:intron | 35.0% |
| !!! | GTTTGTTTTGGAACATCCAT+AGG | + | chr7_2:66145091-66145110 | None:intergenic | 35.0% |
| !!! | TGAAGAGTACTCGTTTGTTT+TGG | + | chr7_2:66145103-66145122 | None:intergenic | 35.0% |
| TACTACATTTGTGGAAAGCT+GGG | + | chr7_2:66145176-66145195 | None:intergenic | 35.0% | |
| TTACTACATTTGTGGAAAGC+TGG | + | chr7_2:66145177-66145196 | None:intergenic | 35.0% | |
| GGAGCACATTAAATTCTTAG+AGG | - | chr7_2:66145468-66145487 | Msa1070210:CDS | 35.0% | |
| GCACATTAAATTCTTAGAGG+TGG | - | chr7_2:66145471-66145490 | Msa1070210:CDS | 35.0% | |
| !!! | TTTTTGTTTTCGAATGAGCG+CGG | + | chr7_2:66145608-66145627 | None:intergenic | 35.0% |
| AGAGTTGAAATCTTGTGAAC+TGG | - | chr7_2:66145627-66145646 | Msa1070210:CDS | 35.0% | |
| ! | TTCTTTTCATATCGTCAAGC+CGG | + | chr7_2:66145672-66145691 | None:intergenic | 35.0% |
| CGATATGAAAAGAAGGATGT+CGG | - | chr7_2:66145678-66145697 | Msa1070210:CDS | 35.0% | |
| TTCTCCAAAAGGATTATCCT+TGG | - | chr7_2:66146006-66146025 | Msa1070210:five_prime_UTR | 35.0% | |
| TCTCCAAAAGGATTATCCTT+GGG | - | chr7_2:66146007-66146026 | Msa1070210:five_prime_UTR | 35.0% | |
| ! | TTTCCCAAGGATAATCCTTT+TGG | + | chr7_2:66146013-66146032 | None:intergenic | 35.0% |
| ! | ATCTCAACTGAATTTTCCCA+AGG | + | chr7_2:66146026-66146045 | None:intergenic | 35.0% |
| GACTCTAATAGCAAAAGTCG+AGG | - | chr7_2:66142497-66142516 | Msa1070210:three_prime_UTR | 40.0% | |
| GTTTCGTTGTTCTTCAACAG+CGG | + | chr7_2:66142629-66142648 | None:intergenic | 40.0% | |
| TGAAGGAGAATGAGGAATGA+TGG | + | chr7_2:66142713-66142732 | None:intergenic | 40.0% | |
| GTTGGATGAAACTGAGAATG+GGG | + | chr7_2:66142736-66142755 | None:intergenic | 40.0% | |
| !! | GTAAGGAGTGGATTTTTCAG+GGG | + | chr7_2:66142761-66142780 | None:intergenic | 40.0% |
| !! | GGTAAGGAGTGGATTTTTCA+GGG | + | chr7_2:66142762-66142781 | None:intergenic | 40.0% |
| CTTTACATGTCCCATCAGAT+TGG | - | chr7_2:66142888-66142907 | Msa1070210:CDS | 40.0% | |
| !! | TCGAAACTTTAAGGTGGTAC+TGG | + | chr7_2:66142927-66142946 | None:intergenic | 40.0% |
| TCTTGTTAGGGTAAACCTTG+TGG | - | chr7_2:66143004-66143023 | Msa1070210:CDS | 40.0% | |
| TTGCAAATCAGTCTCATGGA+TGG | + | chr7_2:66143053-66143072 | None:intergenic | 40.0% | |
| !! | TTTTTAGCACCCACTAACCA+AGG | - | chr7_2:66143337-66143356 | Msa1070210:CDS | 40.0% |
| ! | ATGACCGCGATTTAAAACCT+TGG | + | chr7_2:66143357-66143376 | None:intergenic | 40.0% |
| ! | GTTGTTATTGCGGAGAATTC+TGG | - | chr7_2:66143400-66143419 | Msa1070210:CDS | 40.0% |
| TCACAATGTCGCAATCTAGA+CGG | - | chr7_2:66143485-66143504 | Msa1070210:intron | 40.0% | |
| GAAGTTCATCTTCCGAAACA+CGG | + | chr7_2:66143960-66143979 | None:intergenic | 40.0% | |
| TGAATATCTGGAAAACCGTC+AGG | + | chr7_2:66144258-66144277 | None:intergenic | 40.0% | |
| TTCTCTATACATCCAATCCC+AGG | - | chr7_2:66144538-66144557 | Msa1070210:CDS | 40.0% | |
| GCAATTGATTGGAAAGACCT+GGG | + | chr7_2:66144558-66144577 | None:intergenic | 40.0% | |
| AGCAATTGATTGGAAAGACC+TGG | + | chr7_2:66144559-66144578 | None:intergenic | 40.0% | |
| TATTGCAGGTTCTTGTCCAA+TGG | - | chr7_2:66144880-66144899 | Msa1070210:intron | 40.0% | |
| ATTGCAGGTTCTTGTCCAAT+GGG | - | chr7_2:66144881-66144900 | Msa1070210:intron | 40.0% | |
| TGTTTGTGTGATGTCCTCTT+TGG | - | chr7_2:66145004-66145023 | Msa1070210:intron | 40.0% | |
| ATTGGGGCTTACTACATTTG+TGG | + | chr7_2:66145185-66145204 | None:intergenic | 40.0% | |
| TCACTTCCTGGTGATCTATT+GGG | + | chr7_2:66145202-66145221 | None:intergenic | 40.0% | |
| TTCACTTCCTGGTGATCTAT+TGG | + | chr7_2:66145203-66145222 | None:intergenic | 40.0% | |
| GGAACGAAAACAAAGAGAAG+CGG | - | chr7_2:66145231-66145250 | Msa1070210:intron | 40.0% | |
| GGACTTCTCAATGATCTAGA+GGG | - | chr7_2:66145271-66145290 | Msa1070210:intron | 40.0% | |
| TCTCAATGATCTAGAGGGTT+TGG | - | chr7_2:66145276-66145295 | Msa1070210:intron | 40.0% | |
| CATCAATCATGCCAAGTCTA+TGG | - | chr7_2:66145405-66145424 | Msa1070210:CDS | 40.0% | |
| GTCAATTTCTGCCATAGACT+TGG | + | chr7_2:66145419-66145438 | None:intergenic | 40.0% | |
| ! | AAGTGAGATTGGCTAACATC+CGG | - | chr7_2:66145497-66145516 | Msa1070210:intron | 40.0% |
| TGAAGAAGTCGCTAATCTTC+AGG | - | chr7_2:66145582-66145601 | Msa1070210:intron | 40.0% | |
| ATCTTGTGAACTGGAGAAGA+TGG | - | chr7_2:66145636-66145655 | Msa1070210:CDS | 40.0% | |
| ! | TCTTTTCATATCGTCAAGCC+GGG | + | chr7_2:66145671-66145690 | None:intergenic | 40.0% |
| GGCTTGACGATATGAAAAGA+AGG | - | chr7_2:66145671-66145690 | Msa1070210:CDS | 40.0% | |
| TATGAAAAGAAGGATGTCGG+AGG | - | chr7_2:66145681-66145700 | Msa1070210:CDS | 40.0% | |
| TAAAACTCGACAAGCAGAAG+CGG | - | chr7_2:66145723-66145742 | Msa1070210:CDS | 40.0% | |
| ATTAACTCTGCATAGTGCAG+GGG | + | chr7_2:66145914-66145933 | None:intergenic | 40.0% | |
| GATTAACTCTGCATAGTGCA+GGG | + | chr7_2:66145915-66145934 | None:intergenic | 40.0% | |
| AGATTAACTCTGCATAGTGC+AGG | + | chr7_2:66145916-66145935 | None:intergenic | 40.0% | |
| CTTGAGAGAGACGTTGGAAT+TGG | + | chr7_2:66142592-66142611 | None:intergenic | 45.0% | |
| !! | GGAATGATGGTGGTTTGTTG+TGG | + | chr7_2:66142700-66142719 | None:intergenic | 45.0% |
| AGGAGAATGAGGAATGATGG+TGG | + | chr7_2:66142710-66142729 | None:intergenic | 45.0% | |
| TGAAACTGAGAATGGGGTGA+AGG | + | chr7_2:66142730-66142749 | None:intergenic | 45.0% | |
| !!! | GTGGATTTTTCAGGGGTTGT+TGG | + | chr7_2:66142754-66142773 | None:intergenic | 45.0% |
| !! | GGGTAAGGAGTGGATTTTTC+AGG | + | chr7_2:66142763-66142782 | None:intergenic | 45.0% |
| TAGATTTGGAGGGTAAGGAG+TGG | + | chr7_2:66142773-66142792 | None:intergenic | 45.0% | |
| ATGCAGATATGGTGTCCTTG+CGG | - | chr7_2:66142808-66142827 | Msa1070210:CDS | 45.0% | |
| GACGTTGCAAATCAGTCTCA+TGG | + | chr7_2:66143057-66143076 | None:intergenic | 45.0% | |
| CTAAGCTTGGCATGTGTCTA+GGG | + | chr7_2:66143599-66143618 | None:intergenic | 45.0% | |
| ACTAAGCTTGGCATGTGTCT+AGG | + | chr7_2:66143600-66143619 | None:intergenic | 45.0% | |
| ATCCTGTGGTTACCGTGTTT+CGG | - | chr7_2:66143945-66143964 | Msa1070210:intron | 45.0% | |
| ACGATGCTTGTGTTATCGAC+TGG | + | chr7_2:66144006-66144025 | None:intergenic | 45.0% | |
| ATCTGCTTGCTTTGTCGGTA+AGG | + | chr7_2:66144030-66144049 | None:intergenic | 45.0% | |
| GAGAGATCTGCTTGCTTTGT+CGG | + | chr7_2:66144035-66144054 | None:intergenic | 45.0% | |
| CTGACTAATGACTTCGCTGA+GGG | - | chr7_2:66144102-66144121 | Msa1070210:CDS | 45.0% | |
| ! | TTCTGAGAATCCTTCACCTG+TGG | - | chr7_2:66144170-66144189 | Msa1070210:CDS | 45.0% |
| ! | GCTGTATCTGAGATTCCTGA+GGG | - | chr7_2:66144192-66144211 | Msa1070210:CDS | 45.0% |
| ATTCCTGAGGGAAAAAGCAG+AGG | - | chr7_2:66144204-66144223 | Msa1070210:CDS | 45.0% | |
| !! | TGTCGACAACTGGTCTTTGA+GGG | + | chr7_2:66144357-66144376 | None:intergenic | 45.0% |
| AAATACGCTCTGTCGACAAC+TGG | + | chr7_2:66144367-66144386 | None:intergenic | 45.0% | |
| TTGTCGACAGAGCGTATTTC+AGG | - | chr7_2:66144368-66144387 | Msa1070210:CDS | 45.0% | |
| TGTCGACAGAGCGTATTTCA+GGG | - | chr7_2:66144369-66144388 | Msa1070210:CDS | 45.0% | |
| TGATTGGAAAGACCTGGGAT+TGG | + | chr7_2:66144553-66144572 | None:intergenic | 45.0% | |
| GACAGTAGTACAAGCACATG+TGG | - | chr7_2:66144806-66144825 | Msa1070210:intron | 45.0% | |
| !! | TCTTGTCCAATGGGTTGGTT+AGG | - | chr7_2:66144890-66144909 | Msa1070210:intron | 45.0% |
| !! | GAAAGCTGGGTGCATTGATT+AGG | + | chr7_2:66145163-66145182 | None:intergenic | 45.0% |
| CACTTCCTGGTGATCTATTG+GGG | + | chr7_2:66145201-66145220 | None:intergenic | 45.0% | |
| ACCAGGAAGTGAACAGCTAA+AGG | - | chr7_2:66145210-66145229 | Msa1070210:intron | 45.0% | |
| TCCTTTAGCTGTTCACTTCC+TGG | + | chr7_2:66145214-66145233 | None:intergenic | 45.0% | |
| AGCGGTGATATTTATGCAGC+AGG | - | chr7_2:66145249-66145268 | Msa1070210:intron | 45.0% | |
| GCGGTGATATTTATGCAGCA+GGG | - | chr7_2:66145250-66145269 | Msa1070210:intron | 45.0% | |
| GGGACTTCTCAATGATCTAG+AGG | - | chr7_2:66145270-66145289 | Msa1070210:intron | 45.0% | |
| GGCAGAAATTGACAAGTCCA+TGG | - | chr7_2:66145426-66145445 | Msa1070210:CDS | 45.0% | |
| ! | CAGAGTAGGCGAATTTTCCA+TGG | + | chr7_2:66145446-66145465 | None:intergenic | 45.0% |
| CATGGAAAATTCGCCTACTC+TGG | - | chr7_2:66145444-66145463 | Msa1070210:CDS | 45.0% | |
| TTAATGTGCTCCTCCAGAGT+AGG | + | chr7_2:66145460-66145479 | None:intergenic | 45.0% | |
| AGAGGTGGAGAAAGTGAGAT+TGG | - | chr7_2:66145486-66145505 | Msa1070210:intron | 45.0% | |
| ! | AGTGAGATTGGCTAACATCC+GGG | - | chr7_2:66145498-66145517 | Msa1070210:intron | 45.0% |
| CAATCTTCACACAGTCATCC+CGG | + | chr7_2:66145519-66145538 | None:intergenic | 45.0% | |
| TTGTGAACTGGAGAAGATGG+AGG | - | chr7_2:66145639-66145658 | Msa1070210:CDS | 45.0% | |
| AACGTGCGTTGGAAAAGTAG+TGG | - | chr7_2:66145812-66145831 | Msa1070210:CDS | 45.0% | |
| GAAGAGCTTGAGAGAGACGT+TGG | + | chr7_2:66142598-66142617 | None:intergenic | 50.0% | |
| GAATGGGGTGAAGGAGAATG+AGG | + | chr7_2:66142721-66142740 | None:intergenic | 50.0% | |
| ATATGGTGTCCTTGCGGTCA+TGG | - | chr7_2:66142814-66142833 | Msa1070210:CDS | 50.0% | |
| CCAGCAAGACATTGACACTC+AGG | + | chr7_2:66143094-66143113 | None:intergenic | 50.0% | |
| CCTGAGTGTCAATGTCTTGC+TGG | - | chr7_2:66143091-66143110 | Msa1070210:CDS | 50.0% | |
| CAATGTCGCAATCTAGACGG+CGG | - | chr7_2:66143488-66143507 | Msa1070210:intron | 50.0% | |
| AAACAGGGTCATGGATCCTG+TGG | - | chr7_2:66143931-66143950 | Msa1070210:intron | 50.0% | |
| TTCCGAAACACGGTAACCAC+AGG | + | chr7_2:66143950-66143969 | None:intergenic | 50.0% | |
| !! | GGAGACCAAGTTGATACAGC+TGG | - | chr7_2:66144072-66144091 | Msa1070210:intron | 50.0% |
| CGTTGCCAGCTGTATCAACT+TGG | + | chr7_2:66144080-66144099 | None:intergenic | 50.0% | |
| CCTCAGCGAAGTCATTAGTC+AGG | + | chr7_2:66144104-66144123 | None:intergenic | 50.0% | |
| CCTGACTAATGACTTCGCTG+AGG | - | chr7_2:66144101-66144120 | Msa1070210:CDS | 50.0% | |
| TCAGATACAGCCACAGGTGA+AGG | + | chr7_2:66144183-66144202 | None:intergenic | 50.0% | |
| GGAATCTCAGATACAGCCAC+AGG | + | chr7_2:66144189-66144208 | None:intergenic | 50.0% | |
| ! | GGCTGTATCTGAGATTCCTG+AGG | - | chr7_2:66144191-66144210 | Msa1070210:CDS | 50.0% |
| !!! | GATCCTCTGCTTTTTCCCTC+AGG | + | chr7_2:66144210-66144229 | None:intergenic | 50.0% |
| AAGCAGAGGATCACCAACAG+AGG | - | chr7_2:66144218-66144237 | Msa1070210:intron | 50.0% | |
| !! | CTGTCGACAACTGGTCTTTG+AGG | + | chr7_2:66144358-66144377 | None:intergenic | 50.0% |
| GTCGACAGAGCGTATTTCAG+GGG | - | chr7_2:66144370-66144389 | Msa1070210:CDS | 50.0% | |
| TCGACAGAGCGTATTTCAGG+GGG | - | chr7_2:66144371-66144390 | Msa1070210:CDS | 50.0% | |
| CTTGCGGTGAAAGTAGAAGC+AGG | + | chr7_2:66144491-66144510 | None:intergenic | 50.0% | |
| CAGGTTCTTGTCCAATGGGT+TGG | - | chr7_2:66144885-66144904 | Msa1070210:intron | 50.0% | |
| GTAAGCCCCAATAGATCACC+AGG | - | chr7_2:66145193-66145212 | Msa1070210:intron | 50.0% | |
| TGTCTCTCATAGACTCGTGC+TGG | + | chr7_2:66145309-66145328 | None:intergenic | 50.0% | |
| GGAAAATTCGCCTACTCTGG+AGG | - | chr7_2:66145447-66145466 | Msa1070210:CDS | 50.0% | |
| AGAAGATGGAGGAAGAGACC+CGG | - | chr7_2:66145650-66145669 | Msa1070210:CDS | 50.0% | |
| AGACAGACACCATGACCGCA+AGG | + | chr7_2:66142826-66142845 | None:intergenic | 55.0% | |
| CGCGGTCATGTTGAGATCCT+CGG | - | chr7_2:66143368-66143387 | Msa1070210:CDS | 55.0% | |
| AACGTGAGGTGGGGGTGAAT+TGG | - | chr7_2:66143657-66143676 | Msa1070210:intron | 55.0% | |
| AGGCGACCTAACCAACCCAT+TGG | + | chr7_2:66144899-66144918 | None:intergenic | 55.0% | |
| AGTTGCAGCCAAGACAGCAC+TGG | - | chr7_2:66145780-66145799 | Msa1070210:CDS | 55.0% | |
| ! | AGCCAAGACAGCACTGGAGA+AGG | - | chr7_2:66145786-66145805 | Msa1070210:CDS | 55.0% |
| AGCCTTCTCCAGTGCTGTCT+TGG | + | chr7_2:66145791-66145810 | None:intergenic | 55.0% | |
| GGAGAAGGCTAAACGTGCGT+TGG | - | chr7_2:66145801-66145820 | Msa1070210:CDS | 55.0% | |
| AACTCTGCATAGTGCAGGGG+TGG | + | chr7_2:66145911-66145930 | None:intergenic | 55.0% | |
| TAGTACTGTCGCAGCGACGC+AGG | + | chr7_2:66142467-66142486 | None:intergenic | 60.0% | |
| CGCAATCTAGACGGCGGTTC+TGG | - | chr7_2:66143494-66143513 | Msa1070210:intron | 60.0% | |
| CTCGACAAGCAGAAGCGGCA+AGG | - | chr7_2:66145728-66145747 | Msa1070210:CDS | 60.0% | |
| TCTGCATAGTGCAGGGGTGG+TGG | + | chr7_2:66145908-66145927 | None:intergenic | 60.0% | |
| CGACGCAGGTCGCACGGTGA+AGG | + | chr7_2:66142453-66142472 | None:intergenic | 70.0% | |
| TCGCAGCGACGCAGGTCGCA+CGG | + | chr7_2:66142459-66142478 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 66142412 | 66146092 | 66142412 | ID=Msa1070210;Name=Msa1070210 |
| chr7_2 | mRNA | 66142412 | 66146092 | 66142412 | ID=Msa1070210-mRNA-1;Parent=Msa1070210;Name=Msa1070210-mRNA-1;_AED=0.02;_eAED=0.02;_QI=168|0.75|0.6|1|0.5|0.6|5|261|575 |
| chr7_2 | exon | 66142412 | 66143436 | 66142412 | ID=Msa1070210-mRNA-1:exon:14096;Parent=Msa1070210-mRNA-1 |
| chr7_2 | exon | 66144084 | 66144233 | 66144084 | ID=Msa1070210-mRNA-1:exon:14095;Parent=Msa1070210-mRNA-1 |
| chr7_2 | exon | 66144243 | 66144567 | 66144243 | ID=Msa1070210-mRNA-1:exon:14094;Parent=Msa1070210-mRNA-1 |
| chr7_2 | exon | 66145333 | 66145491 | 66145333 | ID=Msa1070210-mRNA-1:exon:14093;Parent=Msa1070210-mRNA-1 |
| chr7_2 | exon | 66145595 | 66146092 | 66145595 | ID=Msa1070210-mRNA-1:exon:14092;Parent=Msa1070210-mRNA-1 |
| chr7_2 | five_prime_UTR | 66145925 | 66146092 | 66145925 | ID=Msa1070210-mRNA-1:five_prime_utr;Parent=Msa1070210-mRNA-1 |
| chr7_2 | CDS | 66145595 | 66145924 | 66145595 | ID=Msa1070210-mRNA-1:cds;Parent=Msa1070210-mRNA-1 |
| chr7_2 | CDS | 66145333 | 66145491 | 66145333 | ID=Msa1070210-mRNA-1:cds;Parent=Msa1070210-mRNA-1 |
| chr7_2 | CDS | 66144243 | 66144567 | 66144243 | ID=Msa1070210-mRNA-1:cds;Parent=Msa1070210-mRNA-1 |
| chr7_2 | CDS | 66144084 | 66144233 | 66144084 | ID=Msa1070210-mRNA-1:cds;Parent=Msa1070210-mRNA-1 |
| chr7_2 | CDS | 66142673 | 66143436 | 66142673 | ID=Msa1070210-mRNA-1:cds;Parent=Msa1070210-mRNA-1 |
| chr7_2 | three_prime_UTR | 66142412 | 66142672 | 66142412 | ID=Msa1070210-mRNA-1:three_prime_utr;Parent=Msa1070210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
