Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121560 | XP_024625697.1 | 92.078 | 770 | 47 | 4 | 1 | 760 | 1 | 766 | 0.0 | 1394 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121560 | sp|Q5ZK33|LETM1_CHICK | 45.479 | 365 | 186 | 5 | 221 | 576 | 158 | 518 | 2.06e-93 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121560 | G7KSF6 | 92.078 | 770 | 47 | 4 | 1 | 760 | 1 | 766 | 0.0 | 1394 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1029270 | Msa1121560 | 0.810800 | 9.624216e-51 | -8.615850e-47 |
| Msa1068140 | Msa1121560 | 0.886645 | 2.856245e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121560 | MtrunA17_Chr7g0249691 | 89.065 | 759 | 49 | 6 | 1 | 731 | 1 | 753 | 0.0 | 1334 |
| Msa1121560 | MtrunA17_Chr8g0380541 | 70.458 | 677 | 189 | 7 | 78 | 745 | 36 | 710 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121560 | AT1G65540.1 | 75.710 | 634 | 147 | 3 | 117 | 747 | 91 | 720 | 0.0 | 909 |
| Msa1121560 | AT1G65540.2 | 75.710 | 634 | 147 | 3 | 117 | 747 | 91 | 720 | 0.0 | 909 |
| Msa1121560 | AT1G65540.3 | 75.710 | 634 | 147 | 3 | 117 | 747 | 91 | 720 | 0.0 | 909 |
| Msa1121560 | AT3G59820.3 | 61.269 | 772 | 264 | 12 | 1 | 756 | 1 | 753 | 0.0 | 867 |
| Msa1121560 | AT3G59820.4 | 61.269 | 772 | 264 | 12 | 1 | 756 | 1 | 753 | 0.0 | 867 |
| Msa1121560 | AT3G59820.1 | 61.269 | 772 | 264 | 12 | 1 | 756 | 1 | 753 | 0.0 | 867 |
| Msa1121560 | AT3G59820.2 | 61.962 | 744 | 251 | 11 | 1 | 731 | 1 | 725 | 0.0 | 845 |
Find 177 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTGGAGGTTTGAATTT+TGG | 0.104892 | 7_3:+71646024 | Msa1121560:CDS |
| TATCGGCATCTTCTTTCTTT+TGG | 0.137481 | 7_3:-71651479 | None:intergenic |
| GAACTCGTCGTTAAATAATT+TGG | 0.208722 | 7_3:-71647121 | None:intergenic |
| TATTGATGACGAAAGAAATT+TGG | 0.216329 | 7_3:+71649325 | Msa1121560:CDS |
| AAACTTTGGGCTATGATTCT+AGG | 0.239557 | 7_3:+71646312 | Msa1121560:CDS |
| GACGATGTTGATGCTAAAAT+TGG | 0.246919 | 7_3:+71650181 | Msa1121560:CDS |
| GGTGGAAGACATTGTCAAAT+TGG | 0.256061 | 7_3:+71651452 | Msa1121560:CDS |
| TCTTCCTACTTCGTCATTAT+CGG | 0.271995 | 7_3:-71651496 | None:intergenic |
| GCATGTTGGGAAACAGTTTC+AGG | 0.294743 | 7_3:-71646707 | None:intergenic |
| GTTTGTAATGATGAAATCTT+AGG | 0.301431 | 7_3:+71647093 | Msa1121560:CDS |
| CATGCTGCCTTCCACTTTCC+AGG | 0.310784 | 7_3:+71646725 | Msa1121560:CDS |
| ATACCAACCATTATTCTTCA+TGG | 0.316295 | 7_3:-71651592 | None:intergenic |
| AATCTATTGTAAAGAAACTT+TGG | 0.333923 | 7_3:+71646298 | Msa1121560:CDS |
| ATTTATCATAGTTCCATTCA+TGG | 0.344354 | 7_3:+71646665 | Msa1121560:CDS |
| AACTACTTTGGGCTGATGTT+AGG | 0.348834 | 7_3:+71646529 | Msa1121560:CDS |
| AATCCACTCTGCAACACTAT+TGG | 0.356452 | 7_3:+71646496 | Msa1121560:CDS |
| TTAGTTTCTCTTTCGAGATT+GGG | 0.357826 | 7_3:+71646069 | Msa1121560:CDS |
| TTTCATTGCCTAGGGATGAT+TGG | 0.358649 | 7_3:+71646439 | Msa1121560:intron |
| TTCTGCTAATCAATCTAGAT+TGG | 0.359867 | 7_3:+71646128 | Msa1121560:CDS |
| CACAGTATCTTGAAGAAACT+TGG | 0.366611 | 7_3:-71646893 | None:intergenic |
| GGTTTGGAACAAAACTACTT+TGG | 0.368031 | 7_3:+71646517 | Msa1121560:CDS |
| TATCTCTTCTCGTGTTTGTT+CGG | 0.372851 | 7_3:-71649372 | None:intergenic |
| GTTAGTTTCTCTTTCGAGAT+TGG | 0.373963 | 7_3:+71646068 | Msa1121560:CDS |
| GTTTGGAACAAAACTACTTT+GGG | 0.376079 | 7_3:+71646518 | Msa1121560:CDS |
| GCCTTCTGAAGATTCTGTTT+CGG | 0.377687 | 7_3:+71648847 | Msa1121560:CDS |
| TTCATTGCCTAGGGATGATT+GGG | 0.378149 | 7_3:+71646440 | Msa1121560:intron |
| TTTGAATCTAGTGAATTAGA+TGG | 0.381374 | 7_3:+71645877 | Msa1121560:CDS |
| AAGGGAAAGAAATATGAATA+TGG | 0.383727 | 7_3:+71645966 | Msa1121560:CDS |
| TGGGCTATGATTCTAGGAAT+TGG | 0.383885 | 7_3:+71646318 | Msa1121560:CDS |
| TCTCGTGTTTGTTCGGTCGT+TGG | 0.384664 | 7_3:-71649365 | None:intergenic |
| TCCTTGAATTCTCAAGTGTT+GGG | 0.387589 | 7_3:+71645842 | Msa1121560:CDS |
| ATCTATTGTAAAGAAACTTT+GGG | 0.394179 | 7_3:+71646299 | Msa1121560:CDS |
| ATGTATCTGAAGGACACTTT+AGG | 0.397048 | 7_3:+71650673 | Msa1121560:CDS |
| AAAGGTTGCTGATAAGTTCA+TGG | 0.397105 | 7_3:-71650708 | None:intergenic |
| ATAAACAGATGGGAAAATAT+TGG | 0.403532 | 7_3:+71651431 | Msa1121560:intron |
| AAATATGCATCAGTACCATA+TGG | 0.406722 | 7_3:-71647325 | None:intergenic |
| TATGAATATGGAAGATTGTT+CGG | 0.406790 | 7_3:+71645978 | Msa1121560:CDS |
| ATCGCTGGCGGTTGCTAGAC+AGG | 0.407192 | 7_3:+71650206 | Msa1121560:CDS |
| TTCTTTGCCAGATGAGGTTG+TGG | 0.409605 | 7_3:+71648802 | Msa1121560:CDS |
| TGGAAATGAAACGGACACTT+TGG | 0.416336 | 7_3:-71646101 | None:intergenic |
| GAGCTGTATAATAGTATGAT+AGG | 0.419632 | 7_3:+71649892 | Msa1121560:intron |
| AATTCTCAAGTGTTGGGATT+GGG | 0.419732 | 7_3:+71645848 | Msa1121560:CDS |
| CCTGTTCTTTCATCTTATCC+TGG | 0.422082 | 7_3:-71646743 | None:intergenic |
| GAAGGATAGTGATGGTGCTT+TGG | 0.422692 | 7_3:+71649969 | Msa1121560:CDS |
| ATGGAAAGAGTCTTTCTAGA+AGG | 0.422702 | 7_3:+71646583 | Msa1121560:CDS |
| TCCCAACACTTGAGAATTCA+AGG | 0.424190 | 7_3:-71645843 | None:intergenic |
| GGAAACAGTTTCAGGAATAC+TGG | 0.425461 | 7_3:-71646699 | None:intergenic |
| TAATGGTTGGTATGTATTCA+TGG | 0.426343 | 7_3:+71651602 | Msa1121560:three_prime_UTR |
| GGTAGCAGCAGTGGTGGAAA+TGG | 0.428127 | 7_3:+71646150 | Msa1121560:CDS |
| TCAAGATACTGTGAAAGAAA+TGG | 0.428407 | 7_3:+71646903 | Msa1121560:CDS |
| GGGCAAAGAAGTTAAGTCAT+TGG | 0.435701 | 7_3:+71646460 | Msa1121560:CDS |
| ACTCTGCAACACTATTGGTT+TGG | 0.436211 | 7_3:+71646501 | Msa1121560:CDS |
| ACAGTATCCACAACCTCATC+TGG | 0.436535 | 7_3:-71648809 | None:intergenic |
| GACAAAATAGCTCGGAAAGC+TGG | 0.436635 | 7_3:-71646342 | None:intergenic |
| ACAAACACGAGAAGAGATAA+AGG | 0.437299 | 7_3:+71649376 | Msa1121560:CDS |
| GTAGCTTGAACAGCCTCCTC+TGG | 0.437673 | 7_3:-71648773 | None:intergenic |
| TAATGAAGTGATTGAACAAA+AGG | 0.438841 | 7_3:-71645801 | None:intergenic |
| GTGGAAGACATTGTCAAATT+GGG | 0.440816 | 7_3:+71651453 | Msa1121560:CDS |
| AATGTAACCATGAAGAATAA+TGG | 0.440989 | 7_3:+71651585 | Msa1121560:three_prime_UTR |
| ATCCTTGAATTCTCAAGTGT+TGG | 0.441288 | 7_3:+71645841 | Msa1121560:CDS |
| AGAGAAAGAGGAAGAGAAGC+AGG | 0.446529 | 7_3:+71649286 | Msa1121560:CDS |
| AAGTGTCCGTTTCATTTCCA+TGG | 0.448245 | 7_3:+71646104 | Msa1121560:CDS |
| CTTCCCTCTTGATTCTCTCT+AGG | 0.448680 | 7_3:+71648638 | Msa1121560:CDS |
| AGCAACCTTTCGAAGGATAG+TGG | 0.451344 | 7_3:+71650721 | Msa1121560:CDS |
| AAAGTGGAAGGCAGCATGTT+GGG | 0.451596 | 7_3:-71646720 | None:intergenic |
| ATGAGGTTGTGGATACTGTT+GGG | 0.454721 | 7_3:+71648813 | Msa1121560:CDS |
| GAATTCTCAAGTGTTGGGAT+TGG | 0.454843 | 7_3:+71645847 | Msa1121560:CDS |
| TACTTGCATAATTACTTTGG+AGG | 0.457607 | 7_3:+71646012 | Msa1121560:CDS |
| AGTGGAAGAAATGCGGCAAC+AGG | 0.459331 | 7_3:+71648023 | Msa1121560:CDS |
| GGAAATGAAACGGACACTTT+GGG | 0.459790 | 7_3:-71646100 | None:intergenic |
| TTTGCAGCTTAATGACTGGC+TGG | 0.464751 | 7_3:+71648588 | Msa1121560:intron |
| AGTAGTTGCGGACAAAGAAA+AGG | 0.469228 | 7_3:-71645914 | None:intergenic |
| CCAGGATAAGATGAAAGAAC+AGG | 0.469685 | 7_3:+71646743 | Msa1121560:CDS |
| TGGTTTGACCTTTCCTGTGA+CGG | 0.471702 | 7_3:-71648753 | None:intergenic |
| ATAGGAGGAGGAAGAGAAAG+AGG | 0.476372 | 7_3:+71649274 | Msa1121560:intron |
| TGTAGGAGGCATTGAAAAGA+AGG | 0.477179 | 7_3:+71646848 | Msa1121560:intron |
| TGTAGAGACAGAGGATTGCT+TGG | 0.477214 | 7_3:+71647991 | Msa1121560:CDS |
| GTTGGAATATCTTGAAATGC+AGG | 0.478824 | 7_3:+71648883 | Msa1121560:CDS |
| ACTATGATAAATACAGCAAA+AGG | 0.479877 | 7_3:-71646654 | None:intergenic |
| AGAAGGTGCTGAAGGTGAGC+AGG | 0.481402 | 7_3:+71649918 | Msa1121560:CDS |
| ATCAATAGATTCTGTCACTT+TGG | 0.483114 | 7_3:-71649309 | None:intergenic |
| TCACTTTGGATAACATTAGC+AGG | 0.483499 | 7_3:+71647142 | Msa1121560:CDS |
| AGTAAACATGTGTAAATACA+TGG | 0.492242 | 7_3:+71647294 | Msa1121560:CDS |
| TTTCTTTGCAGCTTAATGAC+TGG | 0.493232 | 7_3:+71648584 | Msa1121560:intron |
| TTCGGAGAGGAAGAGAAAGT+TGG | 0.495063 | 7_3:+71648865 | Msa1121560:CDS |
| GGCTTATAGAGCTGCAAGGA+AGG | 0.496015 | 7_3:+71649951 | Msa1121560:CDS |
| GGCAACAGAATCTCCATGAA+TGG | 0.498458 | 7_3:-71646678 | None:intergenic |
| TTAATGGAACAGGTCAGAAC+AGG | 0.498584 | 7_3:+71647063 | Msa1121560:intron |
| AGGTGAGCAGGAAGCTGAGA+AGG | 0.501001 | 7_3:+71649930 | Msa1121560:CDS |
| ATCTGATACTAAACAGAAGA+AGG | 0.502056 | 7_3:+71646176 | Msa1121560:CDS |
| TCTGCTAATCAATCTAGATT+GGG | 0.505305 | 7_3:+71646129 | Msa1121560:CDS |
| TCTAATTCACTAGATTCAAA+TGG | 0.508701 | 7_3:-71645874 | None:intergenic |
| TACATGGGTATCATCCCATA+TGG | 0.509555 | 7_3:+71647310 | Msa1121560:CDS |
| TTGCAAGATCAGCCAAGCAT+TGG | 0.512037 | 7_3:+71649427 | Msa1121560:CDS |
| ACTCTCTTCTTTGCCAGATG+AGG | 0.512039 | 7_3:+71648796 | Msa1121560:CDS |
| ATCCTCTGTCTCTACAAGCT+TGG | 0.518916 | 7_3:-71647984 | None:intergenic |
| ACAGAAGAAGGAAGCTTCGC+CGG | 0.519003 | 7_3:+71646188 | Msa1121560:CDS |
| ATAGATTCAGTACTCTTATG+TGG | 0.521750 | 7_3:-71646282 | None:intergenic |
| AATAGTATGATAGGCAAAGA+AGG | 0.523272 | 7_3:+71649901 | Msa1121560:CDS |
| AAGGACACTTTAGGAAAAGA+AGG | 0.523689 | 7_3:+71650682 | Msa1121560:CDS |
| ATGCTAAAACAGCCAATGCT+TGG | 0.528417 | 7_3:-71649439 | None:intergenic |
| ATTTAACGACGAGTTCACTT+TGG | 0.528523 | 7_3:+71647128 | Msa1121560:CDS |
| TGTTCTGGCAGGGACTATGA+TGG | 0.528563 | 7_3:+71650616 | Msa1121560:intron |
| GATGAGGTTGTGGATACTGT+TGG | 0.531339 | 7_3:+71648812 | Msa1121560:CDS |
| GCAGCGGATACAACCTCCTC+AGG | 0.532546 | 7_3:-71650649 | None:intergenic |
| TCTAGAAAGACTCTTTCCAT+TGG | 0.533287 | 7_3:-71646580 | None:intergenic |
| AAATTTGGCTACGGAAGAGA+TGG | 0.534867 | 7_3:+71649340 | Msa1121560:CDS |
| TTTCATCTTATCCTGGAAAG+TGG | 0.538647 | 7_3:-71646736 | None:intergenic |
| AGAGGGAAGACGGCAAAGAA+TGG | 0.538911 | 7_3:-71648624 | None:intergenic |
| GTGAATTAGATGGCTTGAGT+TGG | 0.544757 | 7_3:+71645887 | Msa1121560:CDS |
| TAGTTTCTCTTTCGAGATTG+GGG | 0.547487 | 7_3:+71646070 | Msa1121560:CDS |
| TTCTTCAGCACTTGTTGACA+AGG | 0.547951 | 7_3:+71650014 | Msa1121560:CDS |
| CAGAAGCCATGGAAATGAAA+CGG | 0.551493 | 7_3:-71646110 | None:intergenic |
| GAGAGAATCAAGAGGGAAGA+CGG | 0.551607 | 7_3:-71648634 | None:intergenic |
| AACAGATGGGAAAATATTGG+TGG | 0.553061 | 7_3:+71651434 | Msa1121560:intron |
| AATATGCATCAGTACCATAT+GGG | 0.557193 | 7_3:-71647324 | None:intergenic |
| GTAGTTGCGGACAAAGAAAA+GGG | 0.558552 | 7_3:-71645913 | None:intergenic |
| ATGCTAAAATTGGAGATCGC+TGG | 0.559815 | 7_3:+71650191 | Msa1121560:CDS |
| TGGAAAGAGTCTTTCTAGAA+GGG | 0.561378 | 7_3:+71646584 | Msa1121560:CDS |
| TTGTCCGCAACTACTGGACA+TGG | 0.563773 | 7_3:+71645922 | Msa1121560:CDS |
| ATCTTATCCTGGAAAGTGGA+AGG | 0.564217 | 7_3:-71646732 | None:intergenic |
| TTTCTCTTTCGAGATTGGGG+TGG | 0.568272 | 7_3:+71646073 | Msa1121560:CDS |
| TTATTGTTAAAACTTGCCAA+TGG | 0.570263 | 7_3:+71646564 | Msa1121560:CDS |
| GATAAACTGATTCAAGAAGA+AGG | 0.570696 | 7_3:+71647931 | Msa1121560:CDS |
| TGCTCATCGACAAAATAGCT+CGG | 0.572861 | 7_3:-71646350 | None:intergenic |
| GATGCCGATAATGACGAAGT+AGG | 0.574789 | 7_3:+71651492 | Msa1121560:CDS |
| ATGATTCACATGAACATGGA+AGG | 0.581121 | 7_3:+71645947 | Msa1121560:CDS |
| TTACACATGTTTACTAAGCG+AGG | 0.581753 | 7_3:-71647286 | None:intergenic |
| TACCATAAAAGCGAAAGCTA+AGG | 0.584560 | 7_3:+71646242 | Msa1121560:CDS |
| AGATTGATTAGCAGAAGCCA+TGG | 0.586197 | 7_3:-71646121 | None:intergenic |
| TAACCATGAAGAATAATGGT+TGG | 0.587475 | 7_3:+71651589 | Msa1121560:three_prime_UTR |
| GTTCTGGCAGGGACTATGAT+GGG | 0.587747 | 7_3:+71650617 | Msa1121560:intron |
| AAAGAAGTTAAGTCATTGGA+AGG | 0.587927 | 7_3:+71646464 | Msa1121560:CDS |
| TGTGAAAGAAATGGCGAAGG+AGG | 0.589070 | 7_3:+71646912 | Msa1121560:CDS |
| TCTAGATTGGGTAGCAGCAG+TGG | 0.589930 | 7_3:+71646141 | Msa1121560:CDS |
| TGACGAAAGAAATTTGGCTA+CGG | 0.593538 | 7_3:+71649331 | Msa1121560:CDS |
| AGATTGGGTAGCAGCAGTGG+TGG | 0.595026 | 7_3:+71646144 | Msa1121560:CDS |
| GGAAGTCGCTATTAGTGACA+AGG | 0.596095 | 7_3:+71649990 | Msa1121560:CDS |
| ATCCGCTGCTATGTATCTGA+AGG | 0.599069 | 7_3:+71650663 | Msa1121560:CDS |
| AGAGTCTTTCTAGAAGGGAG+AGG | 0.599255 | 7_3:+71646589 | Msa1121560:CDS |
| TCCGAAACAGAATCTTCAGA+AGG | 0.600323 | 7_3:-71648848 | None:intergenic |
| ATGTCCATGTCCAGTAGTTG+CGG | 0.601443 | 7_3:-71645926 | None:intergenic |
| ATTGCTTGGATTGCGTTCAG+TGG | 0.602150 | 7_3:+71648005 | Msa1121560:CDS |
| GAAAGTGGAAGGCAGCATGT+TGG | 0.605293 | 7_3:-71646721 | None:intergenic |
| ACAGCCTCATCACACTCCTC+CGG | 0.605444 | 7_3:-71646207 | None:intergenic |
| ACTTATCAGCAACCTTTCGA+AGG | 0.609157 | 7_3:+71650714 | Msa1121560:CDS |
| CGCCAAGCTTGTAGAGACAG+AGG | 0.613316 | 7_3:+71647982 | Msa1121560:CDS |
| ACTGATTCAAGAAGAAGGCG+TGG | 0.616468 | 7_3:+71647936 | Msa1121560:CDS |
| AATGCAGGAAGAGCTAATCA+AGG | 0.617848 | 7_3:+71648898 | Msa1121560:CDS |
| AAATTCACAAATAGACACTA+CGG | 0.618279 | 7_3:-71651536 | None:intergenic |
| TCTTGACGAATTTATGAACA+AGG | 0.622171 | 7_3:+71646978 | Msa1121560:CDS |
| CTGAAGATTCTGTTTCGGAG+AGG | 0.625196 | 7_3:+71648852 | Msa1121560:CDS |
| ACTAACCACTATCCTTCGAA+AGG | 0.626702 | 7_3:-71650726 | None:intergenic |
| CTAAAATTGGAGATCGCTGG+CGG | 0.627897 | 7_3:+71650194 | Msa1121560:CDS |
| ATAGGCAAAGAAGGTGCTGA+AGG | 0.629822 | 7_3:+71649910 | Msa1121560:CDS |
| TGATTCACATGAACATGGAA+GGG | 0.630828 | 7_3:+71645948 | Msa1121560:CDS |
| TACTGTGAAAGAAATGGCGA+AGG | 0.632448 | 7_3:+71646909 | Msa1121560:CDS |
| ACGAGAAGAGATAAAGGCAA+AGG | 0.633542 | 7_3:+71649382 | Msa1121560:CDS |
| AAGTGGAGAAATGAAGCAGA+CGG | 0.637605 | 7_3:+71646948 | Msa1121560:CDS |
| GAAGAAGGAAGCTTCGCCGG+AGG | 0.638107 | 7_3:+71646191 | Msa1121560:CDS |
| GGACATGATTCACATGAACA+TGG | 0.639098 | 7_3:+71645943 | Msa1121560:CDS |
| AGGAAAGGTCAAACCAGAGG+AGG | 0.639949 | 7_3:+71648760 | Msa1121560:CDS |
| TGCGTTCAGTGGAAGAAATG+CGG | 0.646423 | 7_3:+71648016 | Msa1121560:CDS |
| GTAAACATGTGTAAATACAT+GGG | 0.648753 | 7_3:+71647295 | Msa1121560:CDS |
| GATACCTAGAGAGAATCAAG+AGG | 0.650724 | 7_3:-71648642 | None:intergenic |
| TTCGCCGGAGGAGTGTGATG+AGG | 0.652757 | 7_3:+71646203 | Msa1121560:CDS |
| ATACCTAGAGAGAATCAAGA+GGG | 0.653393 | 7_3:-71648641 | None:intergenic |
| GGGAGAGGCAGCAACTCACG+AGG | 0.658654 | 7_3:+71646604 | Msa1121560:CDS |
| CACAGGAAAGGTCAAACCAG+AGG | 0.670593 | 7_3:+71648757 | Msa1121560:CDS |
| AAACCAATAGTGTTGCAGAG+TGG | 0.672055 | 7_3:-71646499 | None:intergenic |
| TGAGGTTGTGGATACTGTTG+GGG | 0.672297 | 7_3:+71648814 | Msa1121560:CDS |
| GCTGCAAGGAAGGATAGTGA+TGG | 0.674240 | 7_3:+71649961 | Msa1121560:CDS |
| GAGGTTCAGAATTCACAAAG+TGG | 0.674875 | 7_3:+71646931 | Msa1121560:CDS |
| GTCCTTCAGATACATAGCAG+CGG | 0.678318 | 7_3:-71650665 | None:intergenic |
| AGAAGGCTTATAGAGCTGCA+AGG | 0.679594 | 7_3:+71649947 | Msa1121560:CDS |
| TGATGGGAAAGTGACACCTG+AGG | 0.742826 | 7_3:+71650633 | Msa1121560:CDS |
| TGGGAAAGTGACACCTGAGG+AGG | 0.743763 | 7_3:+71650636 | Msa1121560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATATTATTCTACATT+TGG | + | chr7_3:71649736-71649755 | Msa1121560:intron | 10.0% |
| !!! | TTTTATTATCACTCAATTTT+GGG | + | chr7_3:71646814-71646833 | Msa1121560:intron | 15.0% |
| !! | AAGATAATGTCTTAAAAATA+AGG | + | chr7_3:71648356-71648375 | Msa1121560:intron | 15.0% |
| !! | AGATAATGTCTTAAAAATAA+GGG | + | chr7_3:71648357-71648376 | Msa1121560:intron | 15.0% |
| !! | AATAAGAAAATCAACATATT+TGG | - | chr7_3:71649189-71649208 | None:intergenic | 15.0% |
| !!! | TTCCAACTATTAATAATTTT+TGG | + | chr7_3:71649493-71649512 | Msa1121560:intron | 15.0% |
| !! | AACCAAAAATTATTAATAGT+TGG | - | chr7_3:71649498-71649517 | None:intergenic | 15.0% |
| !!! | AATAATTTTTGGTTAATGAT+TGG | + | chr7_3:71649504-71649523 | Msa1121560:intron | 15.0% |
| !! | TTGCATATGAAAAATTATAA+GGG | - | chr7_3:71650561-71650580 | None:intergenic | 15.0% |
| !! | ATTGCATATGAAAAATTATA+AGG | - | chr7_3:71650562-71650581 | None:intergenic | 15.0% |
| !!! | ACATTTTCATATTAAGATAT+TGG | - | chr7_3:71651364-71651383 | None:intergenic | 15.0% |
| !!! | TTTTACTTGCATAATTACTT+TGG | + | chr7_3:71646009-71646028 | Msa1121560:CDS | 20.0% |
| !! | AATCTATTGTAAAGAAACTT+TGG | + | chr7_3:71646298-71646317 | Msa1121560:CDS | 20.0% |
| !! | ATCTATTGTAAAGAAACTTT+GGG | + | chr7_3:71646299-71646318 | Msa1121560:CDS | 20.0% |
| !!! | CTTTTATTATCACTCAATTT+TGG | + | chr7_3:71646813-71646832 | Msa1121560:intron | 20.0% |
| !! | TATTATTATGTTAATGGAAC+AGG | + | chr7_3:71647053-71647072 | Msa1121560:intron | 20.0% |
| !!! | TCTTCTTGTATTTTACATTA+AGG | + | chr7_3:71647688-71647707 | Msa1121560:intron | 20.0% |
| !!! | CTTCTTGTATTTTACATTAA+GGG | + | chr7_3:71647689-71647708 | Msa1121560:intron | 20.0% |
| !! | GTTAATAATAAACGTTTCAA+TGG | + | chr7_3:71648045-71648064 | Msa1121560:intron | 20.0% |
| !! | TAGTAATTCCAATAAGAAAT+TGG | + | chr7_3:71648435-71648454 | Msa1121560:intron | 20.0% |
| !! | TGACATTTACATAATATAGT+TGG | + | chr7_3:71648479-71648498 | Msa1121560:intron | 20.0% |
| !! | ATGAAAATTCTACAATCTAA+TGG | - | chr7_3:71648998-71649017 | None:intergenic | 20.0% |
| !!! | TTTTCAAAAATGACTTATGT+AGG | - | chr7_3:71649095-71649114 | None:intergenic | 20.0% |
| !!! | TTTTTTATGAAACAAAAGCT+GGG | - | chr7_3:71649844-71649863 | None:intergenic | 20.0% |
| !!! | ATTTTTTATGAAACAAAAGC+TGG | - | chr7_3:71649845-71649864 | None:intergenic | 20.0% |
| !! | AATTTGCATAAAGAAAACAA+TGG | - | chr7_3:71650279-71650298 | None:intergenic | 20.0% |
| !!! | CATTCATATTTGCTAATTTT+TGG | - | chr7_3:71650787-71650806 | None:intergenic | 20.0% |
| !! | TCGTAATTCATAACTATAAA+AGG | + | chr7_3:71651066-71651085 | Msa1121560:intron | 20.0% |
| !! | TAATTCATAACTATAAAAGG+AGG | + | chr7_3:71651069-71651088 | Msa1121560:intron | 20.0% |
| !! | TTATGGTGAAATTATAAAGT+TGG | + | chr7_3:71651245-71651264 | Msa1121560:intron | 20.0% |
| !! | TATGGTGAAATTATAAAGTT+GGG | + | chr7_3:71651246-71651265 | Msa1121560:intron | 20.0% |
| !! | TTATGTTAATCATAAACAGA+TGG | + | chr7_3:71651420-71651439 | Msa1121560:intron | 20.0% |
| !! | TATGTTAATCATAAACAGAT+GGG | + | chr7_3:71651421-71651440 | Msa1121560:intron | 20.0% |
| ! | TAATGAAGTGATTGAACAAA+AGG | - | chr7_3:71645804-71645823 | None:intergenic | 25.0% |
| ! | TCTAATTCACTAGATTCAAA+TGG | - | chr7_3:71645877-71645896 | None:intergenic | 25.0% |
| ! | TTTGAATCTAGTGAATTAGA+TGG | + | chr7_3:71645877-71645896 | Msa1121560:CDS | 25.0% |
| ! | AAGGGAAAGAAATATGAATA+TGG | + | chr7_3:71645966-71645985 | Msa1121560:CDS | 25.0% |
| ! | TATGAATATGGAAGATTGTT+CGG | + | chr7_3:71645978-71645997 | Msa1121560:CDS | 25.0% |
| ! | TTATTGTTAAAACTTGCCAA+TGG | + | chr7_3:71646564-71646583 | Msa1121560:CDS | 25.0% |
| ! | ACTATGATAAATACAGCAAA+AGG | - | chr7_3:71646657-71646676 | None:intergenic | 25.0% |
| ! | ATTTATCATAGTTCCATTCA+TGG | + | chr7_3:71646665-71646684 | Msa1121560:CDS | 25.0% |
| ! | GTTTGTAATGATGAAATCTT+AGG | + | chr7_3:71647093-71647112 | Msa1121560:CDS | 25.0% |
| ! | AGTAAACATGTGTAAATACA+TGG | + | chr7_3:71647294-71647313 | Msa1121560:CDS | 25.0% |
| ! | GTAAACATGTGTAAATACAT+GGG | + | chr7_3:71647295-71647314 | Msa1121560:CDS | 25.0% |
| ! | GTTATCACATAAAGGAAAAA+AGG | - | chr7_3:71647396-71647415 | None:intergenic | 25.0% |
| ! | TAATCAGAGTTATCACATAA+AGG | - | chr7_3:71647404-71647423 | None:intergenic | 25.0% |
| ! | TTATGTGATAACTCTGATTA+TGG | + | chr7_3:71647404-71647423 | Msa1121560:intron | 25.0% |
| ! | TATCATTCATTGTCTCTTAT+AGG | + | chr7_3:71647435-71647454 | Msa1121560:intron | 25.0% |
| ! | GTAGTACATAATTGAATTGT+AGG | + | chr7_3:71647641-71647660 | Msa1121560:intron | 25.0% |
| ! | GAAATACTCAATACATACAT+GGG | + | chr7_3:71647663-71647682 | Msa1121560:intron | 25.0% |
| !!! | TTTTCTAAAAGTAGCCATTA+TGG | - | chr7_3:71648155-71648174 | None:intergenic | 25.0% |
| !! | ATTTTTGAATGCTATTGTGT+TGG | + | chr7_3:71648324-71648343 | Msa1121560:intron | 25.0% |
| ! | AGGAATGAGAAATATGTATT+AGG | + | chr7_3:71648398-71648417 | Msa1121560:intron | 25.0% |
| ! | CAAAACATAAATATCTCTGA+TGG | - | chr7_3:71648950-71648969 | None:intergenic | 25.0% |
| ! | TAGTAGGAAGAAATATAGAA+TGG | + | chr7_3:71649037-71649056 | Msa1121560:intron | 25.0% |
| ! | AAGAAATATAGAATGGAAGA+GGG | + | chr7_3:71649044-71649063 | Msa1121560:intron | 25.0% |
| ! | ATGGTTGCAAGATATTTAAT+AGG | + | chr7_3:71649256-71649275 | Msa1121560:intron | 25.0% |
| !!! | TATTGATGACGAAAGAAATT+TGG | + | chr7_3:71649325-71649344 | Msa1121560:CDS | 25.0% |
| !!! | AAGTGTTAAACTTAGCTTTT+TGG | + | chr7_3:71649708-71649727 | Msa1121560:intron | 25.0% |
| !! | ATAAGTGTCATTCAAATGTT+TGG | + | chr7_3:71650590-71650609 | Msa1121560:intron | 25.0% |
| ! | CTTTATAATTTCACCATAAG+AGG | - | chr7_3:71651244-71651263 | None:intergenic | 25.0% |
| ! | ATAAACAGATGGGAAAATAT+TGG | + | chr7_3:71651431-71651450 | Msa1121560:intron | 25.0% |
| ! | AAATTCACAAATAGACACTA+CGG | - | chr7_3:71651539-71651558 | None:intergenic | 25.0% |
| ! | AATGTAACCATGAAGAATAA+TGG | + | chr7_3:71651585-71651604 | Msa1121560:three_prime_UTR | 25.0% |
| ! | GAGTGATTTTGCAAAAGAAA+AGG | + | chr7_3:71645776-71645795 | Msa1121560:CDS | 30.0% |
| TACTTGCATAATTACTTTGG+AGG | + | chr7_3:71646012-71646031 | Msa1121560:CDS | 30.0% | |
| !! | TACTTTGGAGGTTTGAATTT+TGG | + | chr7_3:71646024-71646043 | Msa1121560:CDS | 30.0% |
| TTAGTTTCTCTTTCGAGATT+GGG | + | chr7_3:71646069-71646088 | Msa1121560:CDS | 30.0% | |
| TTCTGCTAATCAATCTAGAT+TGG | + | chr7_3:71646128-71646147 | Msa1121560:CDS | 30.0% | |
| TCTGCTAATCAATCTAGATT+GGG | + | chr7_3:71646129-71646148 | Msa1121560:CDS | 30.0% | |
| ATCTGATACTAAACAGAAGA+AGG | + | chr7_3:71646176-71646195 | Msa1121560:CDS | 30.0% | |
| ATAGATTCAGTACTCTTATG+TGG | - | chr7_3:71646285-71646304 | None:intergenic | 30.0% | |
| ACATCACACTTAAAAACAAG+AGG | - | chr7_3:71646392-71646411 | None:intergenic | 30.0% | |
| AAAGAAGTTAAGTCATTGGA+AGG | + | chr7_3:71646464-71646483 | Msa1121560:CDS | 30.0% | |
| ! | GTTTGGAACAAAACTACTTT+GGG | + | chr7_3:71646518-71646537 | Msa1121560:CDS | 30.0% |
| !! | GGCAAGTTTTAACAATAATC+TGG | - | chr7_3:71646562-71646581 | None:intergenic | 30.0% |
| AAACATTATCTGCCTATCTA+CGG | + | chr7_3:71646786-71646805 | Msa1121560:intron | 30.0% | |
| !! | ATTATCACTCAATTTTGGGA+AGG | + | chr7_3:71646818-71646837 | Msa1121560:intron | 30.0% |
| TCAAGATACTGTGAAAGAAA+TGG | + | chr7_3:71646903-71646922 | Msa1121560:CDS | 30.0% | |
| TCTTGACGAATTTATGAACA+AGG | + | chr7_3:71646978-71646997 | Msa1121560:CDS | 30.0% | |
| GAACTCGTCGTTAAATAATT+TGG | - | chr7_3:71647124-71647143 | None:intergenic | 30.0% | |
| CTGTTATGAATCTCATATTC+TGG | + | chr7_3:71647208-71647227 | Msa1121560:intron | 30.0% | |
| !!! | ATGTCTTTTGGTTTCGAAAA+TGG | + | chr7_3:71647254-71647273 | Msa1121560:intron | 30.0% |
| AATATGCATCAGTACCATAT+GGG | - | chr7_3:71647327-71647346 | None:intergenic | 30.0% | |
| AAATATGCATCAGTACCATA+TGG | - | chr7_3:71647328-71647347 | None:intergenic | 30.0% | |
| ! | CTTACTTCTGTAATCTTTTG+CGG | - | chr7_3:71647363-71647382 | None:intergenic | 30.0% |
| !!! | TCGTATTTTTTCGTTTTGTC+TGG | + | chr7_3:71647522-71647541 | Msa1121560:intron | 30.0% |
| !! | CGTTTTGTCTGGTTTAAATA+AGG | + | chr7_3:71647533-71647552 | Msa1121560:intron | 30.0% |
| GGAAATACTCAATACATACA+TGG | + | chr7_3:71647662-71647681 | Msa1121560:intron | 30.0% | |
| ! | CTTGTATTTTACATTAAGGG+TGG | + | chr7_3:71647692-71647711 | Msa1121560:intron | 30.0% |
| AAGTTCCAATGTTATTGTTG+TGG | + | chr7_3:71647812-71647831 | Msa1121560:intron | 30.0% | |
| AGTTCCAATGTTATTGTTGT+GGG | + | chr7_3:71647813-71647832 | Msa1121560:intron | 30.0% | |
| !! | TTGAATTGTTTTGCTTTGAC+AGG | + | chr7_3:71647896-71647915 | Msa1121560:intron | 30.0% |
| ! | GATAAACTGATTCAAGAAGA+AGG | + | chr7_3:71647931-71647950 | Msa1121560:CDS | 30.0% |
| TTTCAATGGAATTTGTGTAC+TGG | + | chr7_3:71648059-71648078 | Msa1121560:intron | 30.0% | |
| CTAGTAAAGTAACACATTGT+TGG | - | chr7_3:71648103-71648122 | None:intergenic | 30.0% | |
| !! | AATGTGTTACTTTACTAGCT+GGG | + | chr7_3:71648105-71648124 | Msa1121560:intron | 30.0% |
| ! | AATTTTTGTGAACGAGAAAC+TGG | + | chr7_3:71648129-71648148 | Msa1121560:intron | 30.0% |
| ! | TCTGAAACTGCAAAAAAAGA+AGG | - | chr7_3:71648190-71648209 | None:intergenic | 30.0% |
| AAATAAGTTCGACAAGAAGA+AGG | - | chr7_3:71648246-71648265 | None:intergenic | 30.0% | |
| GTCTTAAAAATAAGGGTTGT+AGG | + | chr7_3:71648364-71648383 | Msa1121560:intron | 30.0% | |
| GGTTGTAGGTAAAATCTTAT+AGG | + | chr7_3:71648378-71648397 | Msa1121560:intron | 30.0% | |
| CTTCTCTACCAATTTCTTAT+TGG | - | chr7_3:71648446-71648465 | None:intergenic | 30.0% | |
| CAATAAGAAATTGGTAGAGA+AGG | + | chr7_3:71648444-71648463 | Msa1121560:intron | 30.0% | |
| AATTTACAACCCTCAAACAT+GGG | - | chr7_3:71648559-71648578 | None:intergenic | 30.0% | |
| CAAGAAGGGAAATACTTATA+AGG | - | chr7_3:71648695-71648714 | None:intergenic | 30.0% | |
| ATGACTATGCATTTCAAGAA+GGG | - | chr7_3:71648709-71648728 | None:intergenic | 30.0% | |
| AACATAAATATCTCTGATGG+CGG | - | chr7_3:71648947-71648966 | None:intergenic | 30.0% | |
| ! | AGAGATATTTATGTTTTGCG+AGG | + | chr7_3:71648952-71648971 | Msa1121560:intron | 30.0% |
| ! | GAGATATTTATGTTTTGCGA+GGG | + | chr7_3:71648953-71648972 | Msa1121560:intron | 30.0% |
| TATACGTAATGAAGTCTAGT+AGG | + | chr7_3:71649021-71649040 | Msa1121560:intron | 30.0% | |
| GAAGAAATATAGAATGGAAG+AGG | + | chr7_3:71649043-71649062 | Msa1121560:intron | 30.0% | |
| AGAAATATAGAATGGAAGAG+GGG | + | chr7_3:71649045-71649064 | Msa1121560:intron | 30.0% | |
| TGGATGACAATAGTTGAAAA+AGG | - | chr7_3:71649145-71649164 | None:intergenic | 30.0% | |
| GATTCAGATACAATGTTGAT+TGG | - | chr7_3:71649165-71649184 | None:intergenic | 30.0% | |
| TATTGAAGTTGCTATGCTTT+CGG | + | chr7_3:71649205-71649224 | Msa1121560:intron | 30.0% | |
| ! | TGCTTTAGATTTGAGATTGA+TGG | + | chr7_3:71649237-71649256 | Msa1121560:intron | 30.0% |
| GTTGCAAGATATTTAATAGG+AGG | + | chr7_3:71649259-71649278 | Msa1121560:intron | 30.0% | |
| ! | ATCAATAGATTCTGTCACTT+TGG | - | chr7_3:71649312-71649331 | None:intergenic | 30.0% |
| !!! | GTTTTTGAGGCTTGTTAAAA+AGG | + | chr7_3:71649579-71649598 | Msa1121560:CDS | 30.0% |
| TCAAAGTCTTGAAACTCAAA+TGG | + | chr7_3:71649662-71649681 | Msa1121560:intron | 30.0% | |
| TTATTCTACATTTGGTATGC+AGG | + | chr7_3:71649744-71649763 | Msa1121560:intron | 30.0% | |
| GAGCTGTATAATAGTATGAT+AGG | + | chr7_3:71649892-71649911 | Msa1121560:intron | 30.0% | |
| AATAGTATGATAGGCAAAGA+AGG | + | chr7_3:71649901-71649920 | Msa1121560:CDS | 30.0% | |
| AATGCCTGAATTACATTCTT+AGG | + | chr7_3:71650123-71650142 | Msa1121560:intron | 30.0% | |
| TCAACCTAAGAATGTAATTC+AGG | - | chr7_3:71650130-71650149 | None:intergenic | 30.0% | |
| !!! | CAATTTCTTTTTCAAGTGTC+TGG | - | chr7_3:71650162-71650181 | None:intergenic | 30.0% |
| GTAATCATACTGTTCTTTCA+AGG | - | chr7_3:71650253-71650272 | None:intergenic | 30.0% | |
| GATTCTCCTTATAAAAACCA+CGG | - | chr7_3:71650377-71650396 | None:intergenic | 30.0% | |
| !! | TTTTACAAAGCATCATGACA+TGG | + | chr7_3:71650514-71650533 | Msa1121560:intron | 30.0% |
| ! | TTTGGAACAATACGAGAATA+AGG | - | chr7_3:71650769-71650788 | None:intergenic | 30.0% |
| AGAAAGAAAAAAGCTCGAAA+AGG | - | chr7_3:71650914-71650933 | None:intergenic | 30.0% | |
| TAACCATGAAGAATAATGGT+TGG | + | chr7_3:71651589-71651608 | Msa1121560:three_prime_UTR | 30.0% | |
| ATACCAACCATTATTCTTCA+TGG | - | chr7_3:71651595-71651614 | None:intergenic | 30.0% | |
| ! | TAATGGTTGGTATGTATTCA+TGG | + | chr7_3:71651602-71651621 | Msa1121560:three_prime_UTR | 30.0% |
| ATCCTTGAATTCTCAAGTGT+TGG | + | chr7_3:71645841-71645860 | Msa1121560:CDS | 35.0% | |
| TCCTTGAATTCTCAAGTGTT+GGG | + | chr7_3:71645842-71645861 | Msa1121560:CDS | 35.0% | |
| !! | AATTCTCAAGTGTTGGGATT+GGG | + | chr7_3:71645848-71645867 | Msa1121560:CDS | 35.0% |
| ATGATTCACATGAACATGGA+AGG | + | chr7_3:71645947-71645966 | Msa1121560:CDS | 35.0% | |
| TGATTCACATGAACATGGAA+GGG | + | chr7_3:71645948-71645967 | Msa1121560:CDS | 35.0% | |
| ! | GTTAGTTTCTCTTTCGAGAT+TGG | + | chr7_3:71646068-71646087 | Msa1121560:CDS | 35.0% |
| TAGTTTCTCTTTCGAGATTG+GGG | + | chr7_3:71646070-71646089 | Msa1121560:CDS | 35.0% | |
| TACCATAAAAGCGAAAGCTA+AGG | + | chr7_3:71646242-71646261 | Msa1121560:CDS | 35.0% | |
| AAACTTTGGGCTATGATTCT+AGG | + | chr7_3:71646312-71646331 | Msa1121560:CDS | 35.0% | |
| !!! | TTTCTGGTTTTTCATTGCCT+AGG | + | chr7_3:71646430-71646449 | Msa1121560:intron | 35.0% |
| !!! | TTCTGGTTTTTCATTGCCTA+GGG | + | chr7_3:71646431-71646450 | Msa1121560:intron | 35.0% |
| ! | GGTTTGGAACAAAACTACTT+TGG | + | chr7_3:71646517-71646536 | Msa1121560:CDS | 35.0% |
| TCTAGAAAGACTCTTTCCAT+TGG | - | chr7_3:71646583-71646602 | None:intergenic | 35.0% | |
| ATGGAAAGAGTCTTTCTAGA+AGG | + | chr7_3:71646583-71646602 | Msa1121560:CDS | 35.0% | |
| ! | TGGAAAGAGTCTTTCTAGAA+GGG | + | chr7_3:71646584-71646603 | Msa1121560:CDS | 35.0% |
| TTTCATCTTATCCTGGAAAG+TGG | - | chr7_3:71646739-71646758 | None:intergenic | 35.0% | |
| CACAGTATCTTGAAGAAACT+TGG | - | chr7_3:71646896-71646915 | None:intergenic | 35.0% | |
| ATTTAACGACGAGTTCACTT+TGG | + | chr7_3:71647128-71647147 | Msa1121560:CDS | 35.0% | |
| TCACTTTGGATAACATTAGC+AGG | + | chr7_3:71647142-71647161 | Msa1121560:CDS | 35.0% | |
| TTTGGATAACATTAGCAGGT+TGG | + | chr7_3:71647146-71647165 | Msa1121560:intron | 35.0% | |
| TGAACCTAACCAATAGTAGA+AGG | - | chr7_3:71647173-71647192 | None:intergenic | 35.0% | |
| ACATGTTAGCATAACGATCA+TGG | - | chr7_3:71647238-71647257 | None:intergenic | 35.0% | |
| ! | CGTTATGCTAACATGTCTTT+TGG | + | chr7_3:71647242-71647261 | Msa1121560:intron | 35.0% |
| GGTTTCGAAAATGGTTAAAC+AGG | + | chr7_3:71647263-71647282 | Msa1121560:intron | 35.0% | |
| TTACACATGTTTACTAAGCG+AGG | - | chr7_3:71647289-71647308 | None:intergenic | 35.0% | |
| GTCTCTTATAGGTTAGAGTT+AGG | + | chr7_3:71647446-71647465 | Msa1121560:intron | 35.0% | |
| AAACCGAAAAGTAAGTGAGA+AGG | - | chr7_3:71647617-71647636 | None:intergenic | 35.0% | |
| ! | TGACTTTGCTATAGTAGCTA+GGG | + | chr7_3:71647753-71647772 | Msa1121560:intron | 35.0% |
| GACAACGATGAAATTATCGA+TGG | - | chr7_3:71647862-71647881 | None:intergenic | 35.0% | |
| TCGATAATTTCATCGTTGTC+TGG | + | chr7_3:71647862-71647881 | Msa1121560:intron | 35.0% | |
| !! | CAATGTGTTACTTTACTAGC+TGG | + | chr7_3:71648104-71648123 | Msa1121560:intron | 35.0% |
| CTGCAAAAAAAGAAGGAAGA+CGG | - | chr7_3:71648183-71648202 | None:intergenic | 35.0% | |
| TTTGAATGCTATTGTGTTGG+TGG | + | chr7_3:71648327-71648346 | Msa1121560:intron | 35.0% | |
| GTTTAAAAGACAGCATCTTG+TGG | + | chr7_3:71648520-71648539 | Msa1121560:intron | 35.0% | |
| CAATTTACAACCCTCAAACA+TGG | - | chr7_3:71648560-71648579 | None:intergenic | 35.0% | |
| TTTCTTTGCAGCTTAATGAC+TGG | + | chr7_3:71648584-71648603 | Msa1121560:intron | 35.0% | |
| ATACCTAGAGAGAATCAAGA+GGG | - | chr7_3:71648644-71648663 | None:intergenic | 35.0% | |
| GATGACTATGCATTTCAAGA+AGG | - | chr7_3:71648710-71648729 | None:intergenic | 35.0% | |
| GTTGGAATATCTTGAAATGC+AGG | + | chr7_3:71648883-71648902 | Msa1121560:CDS | 35.0% | |
| ! | ATATTTATGTTTTGCGAGGG+AGG | + | chr7_3:71648956-71648975 | Msa1121560:intron | 35.0% |
| GAAATATAGAATGGAAGAGG+GGG | + | chr7_3:71649046-71649065 | Msa1121560:intron | 35.0% | |
| GCAAGATATTTAATAGGAGG+AGG | + | chr7_3:71649262-71649281 | Msa1121560:intron | 35.0% | |
| TGACGAAAGAAATTTGGCTA+CGG | + | chr7_3:71649331-71649350 | Msa1121560:CDS | 35.0% | |
| TATCTCTTCTCGTGTTTGTT+CGG | - | chr7_3:71649375-71649394 | None:intergenic | 35.0% | |
| ACAAACACGAGAAGAGATAA+AGG | + | chr7_3:71649376-71649395 | Msa1121560:CDS | 35.0% | |
| ! | TTTTAGCATCAGCATCTGTA+AGG | + | chr7_3:71649453-71649472 | Msa1121560:intron | 35.0% |
| ! | TTGTCCTATGACTTTTCAGT+CGG | + | chr7_3:71649537-71649556 | Msa1121560:intron | 35.0% |
| ! | AAGAACGTGAAGAGTTTTTG+AGG | + | chr7_3:71649566-71649585 | Msa1121560:CDS | 35.0% |
| !! | TTTGAGGCTTGTTAAAAAGG+AGG | + | chr7_3:71649582-71649601 | Msa1121560:CDS | 35.0% |
| !! | TGATAAATAGCTTGTTCAGG+AGG | - | chr7_3:71649819-71649838 | None:intergenic | 35.0% |
| !! | GCATGATAAATAGCTTGTTC+AGG | - | chr7_3:71649822-71649841 | None:intergenic | 35.0% |
| GACGATGTTGATGCTAAAAT+TGG | + | chr7_3:71650181-71650200 | Msa1121560:CDS | 35.0% | |
| TTTATTTGTGACCTGTTCCA+AGG | + | chr7_3:71650423-71650442 | Msa1121560:intron | 35.0% | |
| ACAAGTTCTTTGAATCTCCT+TGG | - | chr7_3:71650443-71650462 | None:intergenic | 35.0% | |
| ATGTATCTGAAGGACACTTT+AGG | + | chr7_3:71650673-71650692 | Msa1121560:CDS | 35.0% | |
| ! | AAGGACACTTTAGGAAAAGA+AGG | + | chr7_3:71650682-71650701 | Msa1121560:CDS | 35.0% |
| AAAGGTTGCTGATAAGTTCA+TGG | - | chr7_3:71650711-71650730 | None:intergenic | 35.0% | |
| TTAGTTGCATTAATGTGCGA+GGG | - | chr7_3:71650841-71650860 | None:intergenic | 35.0% | |
| ATTAGTTGCATTAATGTGCG+AGG | - | chr7_3:71650842-71650861 | None:intergenic | 35.0% | |
| ! | TCTTTGTTGCACCATCTTTT+AGG | + | chr7_3:71650948-71650967 | Msa1121560:intron | 35.0% |
| ! | AAAACACTTTTCGAACCATG+TGG | + | chr7_3:71651145-71651164 | Msa1121560:intron | 35.0% |
| AGTTCCAAAAACTTTCCACA+TGG | - | chr7_3:71651163-71651182 | None:intergenic | 35.0% | |
| TTGGAACTAACACAACGATA+TGG | + | chr7_3:71651175-71651194 | Msa1121560:intron | 35.0% | |
| AACGATATGGCATTACAGTA+TGG | + | chr7_3:71651188-71651207 | Msa1121560:intron | 35.0% | |
| GCATTACAGTATGGTTTGAT+TGG | + | chr7_3:71651197-71651216 | Msa1121560:intron | 35.0% | |
| ! | GCATAACAATTAGCCTCTTA+TGG | + | chr7_3:71651228-71651247 | Msa1121560:intron | 35.0% |
| AACAGATGGGAAAATATTGG+TGG | + | chr7_3:71651434-71651453 | Msa1121560:intron | 35.0% | |
| GTGGAAGACATTGTCAAATT+GGG | + | chr7_3:71651453-71651472 | Msa1121560:CDS | 35.0% | |
| ! | ATCGGCATCTTCTTTCTTTT+GGG | - | chr7_3:71651481-71651500 | None:intergenic | 35.0% |
| ! | TATCGGCATCTTCTTTCTTT+TGG | - | chr7_3:71651482-71651501 | None:intergenic | 35.0% |
| TCTTCCTACTTCGTCATTAT+CGG | - | chr7_3:71651499-71651518 | None:intergenic | 35.0% | |
| TCCCAACACTTGAGAATTCA+AGG | - | chr7_3:71645846-71645865 | None:intergenic | 40.0% | |
| !! | GAATTCTCAAGTGTTGGGAT+TGG | + | chr7_3:71645847-71645866 | Msa1121560:CDS | 40.0% |
| GTGAATTAGATGGCTTGAGT+TGG | + | chr7_3:71645887-71645906 | Msa1121560:CDS | 40.0% | |
| GTAGTTGCGGACAAAGAAAA+GGG | - | chr7_3:71645916-71645935 | None:intergenic | 40.0% | |
| AGTAGTTGCGGACAAAGAAA+AGG | - | chr7_3:71645917-71645936 | None:intergenic | 40.0% | |
| ! | TTTTCTTTGTCCGCAACTAC+TGG | + | chr7_3:71645916-71645935 | Msa1121560:CDS | 40.0% |
| GGACATGATTCACATGAACA+TGG | + | chr7_3:71645943-71645962 | Msa1121560:CDS | 40.0% | |
| GGAAATGAAACGGACACTTT+GGG | - | chr7_3:71646103-71646122 | None:intergenic | 40.0% | |
| TGGAAATGAAACGGACACTT+TGG | - | chr7_3:71646104-71646123 | None:intergenic | 40.0% | |
| AAGTGTCCGTTTCATTTCCA+TGG | + | chr7_3:71646104-71646123 | Msa1121560:CDS | 40.0% | |
| CAGAAGCCATGGAAATGAAA+CGG | - | chr7_3:71646113-71646132 | None:intergenic | 40.0% | |
| AGATTGATTAGCAGAAGCCA+TGG | - | chr7_3:71646124-71646143 | None:intergenic | 40.0% | |
| !! | AGCCTTAGCTTTCGCTTTTA+TGG | - | chr7_3:71646247-71646266 | None:intergenic | 40.0% |
| ! | TGGGCTATGATTCTAGGAAT+TGG | + | chr7_3:71646318-71646337 | Msa1121560:CDS | 40.0% |
| TGCTCATCGACAAAATAGCT+CGG | - | chr7_3:71646353-71646372 | None:intergenic | 40.0% | |
| ! | ATACGTGTGTCAGACTTTTC+TGG | + | chr7_3:71646414-71646433 | Msa1121560:intron | 40.0% |
| TTTCATTGCCTAGGGATGAT+TGG | + | chr7_3:71646439-71646458 | Msa1121560:intron | 40.0% | |
| TTCATTGCCTAGGGATGATT+GGG | + | chr7_3:71646440-71646459 | Msa1121560:intron | 40.0% | |
| GGGCAAAGAAGTTAAGTCAT+TGG | + | chr7_3:71646460-71646479 | Msa1121560:CDS | 40.0% | |
| AATCCACTCTGCAACACTAT+TGG | + | chr7_3:71646496-71646515 | Msa1121560:CDS | 40.0% | |
| AAACCAATAGTGTTGCAGAG+TGG | - | chr7_3:71646502-71646521 | None:intergenic | 40.0% | |
| ! | ACTCTGCAACACTATTGGTT+TGG | + | chr7_3:71646501-71646520 | Msa1121560:CDS | 40.0% |
| AACTACTTTGGGCTGATGTT+AGG | + | chr7_3:71646529-71646548 | Msa1121560:CDS | 40.0% | |
| ! | GGACAACAGTCGATATTTTC+AGG | + | chr7_3:71646625-71646644 | Msa1121560:CDS | 40.0% |
| GGAAACAGTTTCAGGAATAC+TGG | - | chr7_3:71646702-71646721 | None:intergenic | 40.0% | |
| ATCTTATCCTGGAAAGTGGA+AGG | - | chr7_3:71646735-71646754 | None:intergenic | 40.0% | |
| CCTGTTCTTTCATCTTATCC+TGG | - | chr7_3:71646746-71646765 | None:intergenic | 40.0% | |
| CCAGGATAAGATGAAAGAAC+AGG | + | chr7_3:71646743-71646762 | Msa1121560:CDS | 40.0% | |
| ! | AATAAAAGCACGCCGTAGAT+AGG | - | chr7_3:71646801-71646820 | None:intergenic | 40.0% |
| !! | TTTGGGAAGGCTTAACTTGT+AGG | + | chr7_3:71646831-71646850 | Msa1121560:intron | 40.0% |
| !! | TGTAGGAGGCATTGAAAAGA+AGG | + | chr7_3:71646848-71646867 | Msa1121560:intron | 40.0% |
| TACTGTGAAAGAAATGGCGA+AGG | + | chr7_3:71646909-71646928 | Msa1121560:CDS | 40.0% | |
| GAGGTTCAGAATTCACAAAG+TGG | + | chr7_3:71646931-71646950 | Msa1121560:CDS | 40.0% | |
| AAGTGGAGAAATGAAGCAGA+CGG | + | chr7_3:71646948-71646967 | Msa1121560:CDS | 40.0% | |
| TTAATGGAACAGGTCAGAAC+AGG | + | chr7_3:71647063-71647082 | Msa1121560:intron | 40.0% | |
| ! | TGGTCCTTCTACTATTGGTT+AGG | + | chr7_3:71647166-71647185 | Msa1121560:intron | 40.0% |
| TACATGGGTATCATCCCATA+TGG | + | chr7_3:71647310-71647329 | Msa1121560:CDS | 40.0% | |
| ATGCACGTTATGCCAATGTA+TGG | + | chr7_3:71647584-71647603 | Msa1121560:intron | 40.0% | |
| !! | CTGCCTTCTCACTTACTTTT+CGG | + | chr7_3:71647611-71647630 | Msa1121560:intron | 40.0% |
| ! | GTGACTTTGCTATAGTAGCT+AGG | + | chr7_3:71647752-71647771 | Msa1121560:intron | 40.0% |
| ! | GACTTTGCTATAGTAGCTAG+GGG | + | chr7_3:71647754-71647773 | Msa1121560:intron | 40.0% |
| ! | ACTTTGCTATAGTAGCTAGG+GGG | + | chr7_3:71647755-71647774 | Msa1121560:intron | 40.0% |
| AGCTGAATTCTCAGCTCTTA+TGG | + | chr7_3:71647789-71647808 | Msa1121560:intron | 40.0% | |
| TGCTCCCACAACAATAACAT+TGG | - | chr7_3:71647820-71647839 | None:intergenic | 40.0% | |
| TTATTGTTGTGGGAGCAAGT+TGG | + | chr7_3:71647823-71647842 | Msa1121560:intron | 40.0% | |
| CTCAAAGTAGCAATTACGAG+AGG | - | chr7_3:71648221-71648240 | None:intergenic | 40.0% | |
| GAAATTGGTAGAGAAGGAAG+TGG | + | chr7_3:71648450-71648469 | Msa1121560:intron | 40.0% | |
| AAAAGACAGCATCTTGTGGT+TGG | + | chr7_3:71648524-71648543 | Msa1121560:intron | 40.0% | |
| ACTGTTAGTCCCATGTTTGA+GGG | + | chr7_3:71648547-71648566 | Msa1121560:intron | 40.0% | |
| GATACCTAGAGAGAATCAAG+AGG | - | chr7_3:71648645-71648664 | None:intergenic | 40.0% | |
| ATGAGGTTGTGGATACTGTT+GGG | + | chr7_3:71648813-71648832 | Msa1121560:CDS | 40.0% | |
| ! | GCCTTCTGAAGATTCTGTTT+CGG | + | chr7_3:71648847-71648866 | Msa1121560:CDS | 40.0% |
| TCCGAAACAGAATCTTCAGA+AGG | - | chr7_3:71648851-71648870 | None:intergenic | 40.0% | |
| AATGCAGGAAGAGCTAATCA+AGG | + | chr7_3:71648898-71648917 | Msa1121560:CDS | 40.0% | |
| AAATTTGGCTACGGAAGAGA+TGG | + | chr7_3:71649340-71649359 | Msa1121560:CDS | 40.0% | |
| ACGAGAAGAGATAAAGGCAA+AGG | + | chr7_3:71649382-71649401 | Msa1121560:CDS | 40.0% | |
| ATGCTAAAACAGCCAATGCT+TGG | - | chr7_3:71649442-71649461 | None:intergenic | 40.0% | |
| TGTAGAATTGATCCGTCTCT+AGG | + | chr7_3:71649614-71649633 | Msa1121560:intron | 40.0% | |
| GTAGAATTGATCCGTCTCTA+GGG | + | chr7_3:71649615-71649634 | Msa1121560:intron | 40.0% | |
| ATTCACTACATCCCTAGAGA+CGG | - | chr7_3:71649629-71649648 | None:intergenic | 40.0% | |
| GGGATGTAGTGAATACGTTA+CGG | + | chr7_3:71649635-71649654 | Msa1121560:intron | 40.0% | |
| ! | TTCTTCAGCACTTGTTGACA+AGG | + | chr7_3:71650014-71650033 | Msa1121560:CDS | 40.0% |
| ATGCTAAAATTGGAGATCGC+TGG | + | chr7_3:71650191-71650210 | Msa1121560:CDS | 40.0% | |
| !! | GAAGTTGGCTAACTGCTTTT+TGG | - | chr7_3:71650330-71650349 | None:intergenic | 40.0% |
| AAGCAGTTAGCCAACTTCAA+TGG | + | chr7_3:71650332-71650351 | Msa1121560:intron | 40.0% | |
| ATGGATTCTGCCATTGAAGT+TGG | - | chr7_3:71650345-71650364 | None:intergenic | 40.0% | |
| TCAATGGCAGAATCCATTGA+AGG | + | chr7_3:71650348-71650367 | Msa1121560:intron | 40.0% | |
| ! | AGGACACCGTGGTTTTTATA+AGG | + | chr7_3:71650368-71650387 | Msa1121560:intron | 40.0% |
| TCTTTGAATCTCCTTGGAAC+AGG | - | chr7_3:71650437-71650456 | None:intergenic | 40.0% | |
| TCAAATGTTTGGCCATGTTC+TGG | + | chr7_3:71650601-71650620 | Msa1121560:intron | 40.0% | |
| ACTTATCAGCAACCTTTCGA+AGG | + | chr7_3:71650714-71650733 | Msa1121560:CDS | 40.0% | |
| ACTAACCACTATCCTTCGAA+AGG | - | chr7_3:71650729-71650748 | None:intergenic | 40.0% | |
| TTGCTCTCTAAATCCTCTCA+GGG | - | chr7_3:71650996-71651015 | None:intergenic | 40.0% | |
| ! | CGAACCATGTGGAAAGTTTT+TGG | + | chr7_3:71651156-71651175 | Msa1121560:intron | 40.0% |
| TATCGTTCTACGTTGTACGT+TGG | + | chr7_3:71651308-71651327 | Msa1121560:intron | 40.0% | |
| GGTGGAAGACATTGTCAAAT+TGG | + | chr7_3:71651452-71651471 | Msa1121560:CDS | 40.0% | |
| ATGTCCATGTCCAGTAGTTG+CGG | - | chr7_3:71645929-71645948 | None:intergenic | 45.0% | |
| TTTCTCTTTCGAGATTGGGG+TGG | + | chr7_3:71646073-71646092 | Msa1121560:CDS | 45.0% | |
| GACAAAATAGCTCGGAAAGC+TGG | - | chr7_3:71646345-71646364 | None:intergenic | 45.0% | |
| !! | GAGCTATTTTGTCGATGAGC+AGG | + | chr7_3:71646352-71646371 | Msa1121560:CDS | 45.0% |
| TTCTTTGCCCAATCATCCCT+AGG | - | chr7_3:71646450-71646469 | None:intergenic | 45.0% | |
| ! | AGAGTCTTTCTAGAAGGGAG+AGG | + | chr7_3:71646589-71646608 | Msa1121560:CDS | 45.0% |
| GGCAACAGAATCTCCATGAA+TGG | - | chr7_3:71646681-71646700 | None:intergenic | 45.0% | |
| GCATGTTGGGAAACAGTTTC+AGG | - | chr7_3:71646710-71646729 | None:intergenic | 45.0% | |
| AAAGTGGAAGGCAGCATGTT+GGG | - | chr7_3:71646723-71646742 | None:intergenic | 45.0% | |
| TGTGAAAGAAATGGCGAAGG+AGG | + | chr7_3:71646912-71646931 | Msa1121560:CDS | 45.0% | |
| !! | CAGGTTGGTCCTTCTACTAT+TGG | + | chr7_3:71647161-71647180 | Msa1121560:intron | 45.0% |
| GAAGGCAGACATCCATACAT+TGG | - | chr7_3:71647599-71647618 | None:intergenic | 45.0% | |
| ! | ACTGATTCAAGAAGAAGGCG+TGG | + | chr7_3:71647936-71647955 | Msa1121560:CDS | 45.0% |
| ATCCTCTGTCTCTACAAGCT+TGG | - | chr7_3:71647987-71648006 | None:intergenic | 45.0% | |
| TGTAGAGACAGAGGATTGCT+TGG | + | chr7_3:71647991-71648010 | Msa1121560:CDS | 45.0% | |
| ATTGCTTGGATTGCGTTCAG+TGG | + | chr7_3:71648005-71648024 | Msa1121560:CDS | 45.0% | |
| TGCGTTCAGTGGAAGAAATG+CGG | + | chr7_3:71648016-71648035 | Msa1121560:CDS | 45.0% | |
| GAACGAGAAACTGGCCATAA+TGG | + | chr7_3:71648138-71648157 | Msa1121560:intron | 45.0% | |
| GACTGTTAGTCCCATGTTTG+AGG | + | chr7_3:71648546-71648565 | Msa1121560:intron | 45.0% | |
| TTTGCAGCTTAATGACTGGC+TGG | + | chr7_3:71648588-71648607 | Msa1121560:intron | 45.0% | |
| GAGAGAATCAAGAGGGAAGA+CGG | - | chr7_3:71648637-71648656 | None:intergenic | 45.0% | |
| CTTCCCTCTTGATTCTCTCT+AGG | + | chr7_3:71648638-71648657 | Msa1121560:CDS | 45.0% | |
| ! | AGCATTTTCCGTCACAGGAA+AGG | + | chr7_3:71648745-71648764 | Msa1121560:CDS | 45.0% |
| TGGTTTGACCTTTCCTGTGA+CGG | - | chr7_3:71648756-71648775 | None:intergenic | 45.0% | |
| ACTCTCTTCTTTGCCAGATG+AGG | + | chr7_3:71648796-71648815 | Msa1121560:CDS | 45.0% | |
| TTCTTTGCCAGATGAGGTTG+TGG | + | chr7_3:71648802-71648821 | Msa1121560:CDS | 45.0% | |
| ACAGTATCCACAACCTCATC+TGG | - | chr7_3:71648812-71648831 | None:intergenic | 45.0% | |
| GATGAGGTTGTGGATACTGT+TGG | + | chr7_3:71648812-71648831 | Msa1121560:CDS | 45.0% | |
| TGAGGTTGTGGATACTGTTG+GGG | + | chr7_3:71648814-71648833 | Msa1121560:CDS | 45.0% | |
| CTGAAGATTCTGTTTCGGAG+AGG | + | chr7_3:71648852-71648871 | Msa1121560:CDS | 45.0% | |
| TTCGGAGAGGAAGAGAAAGT+TGG | + | chr7_3:71648865-71648884 | Msa1121560:CDS | 45.0% | |
| ATAGGAGGAGGAAGAGAAAG+AGG | + | chr7_3:71649274-71649293 | Msa1121560:intron | 45.0% | |
| AGAGAAAGAGGAAGAGAAGC+AGG | + | chr7_3:71649286-71649305 | Msa1121560:CDS | 45.0% | |
| TTGCAAGATCAGCCAAGCAT+TGG | + | chr7_3:71649427-71649446 | Msa1121560:CDS | 45.0% | |
| ! | CTCACCGACTGAAAAGTCAT+AGG | - | chr7_3:71649544-71649563 | None:intergenic | 45.0% |
| !! | ATAGGCAAAGAAGGTGCTGA+AGG | + | chr7_3:71649910-71649929 | Msa1121560:CDS | 45.0% |
| AGAAGGCTTATAGAGCTGCA+AGG | + | chr7_3:71649947-71649966 | Msa1121560:CDS | 45.0% | |
| ! | GAAGGATAGTGATGGTGCTT+TGG | + | chr7_3:71649969-71649988 | Msa1121560:CDS | 45.0% |
| GGAAGTCGCTATTAGTGACA+AGG | + | chr7_3:71649990-71650009 | Msa1121560:CDS | 45.0% | |
| CTAAAATTGGAGATCGCTGG+CGG | + | chr7_3:71650194-71650213 | Msa1121560:CDS | 45.0% | |
| AAAACCACGGTGTCCTTCAA+TGG | - | chr7_3:71650364-71650383 | None:intergenic | 45.0% | |
| ATCCGCTGCTATGTATCTGA+AGG | + | chr7_3:71650663-71650682 | Msa1121560:CDS | 45.0% | |
| GTCCTTCAGATACATAGCAG+CGG | - | chr7_3:71650668-71650687 | None:intergenic | 45.0% | |
| AGCAACCTTTCGAAGGATAG+TGG | + | chr7_3:71650721-71650740 | Msa1121560:CDS | 45.0% | |
| CAAAAACCTAATGCAGCACG+AGG | + | chr7_3:71650884-71650903 | Msa1121560:intron | 45.0% | |
| CAGACATGGCTCCTAAAAGA+TGG | - | chr7_3:71650962-71650981 | None:intergenic | 45.0% | |
| TGCTCTCTAAATCCTCTCAG+GGG | - | chr7_3:71650995-71651014 | None:intergenic | 45.0% | |
| CTTGCTCTCTAAATCCTCTC+AGG | - | chr7_3:71650997-71651016 | None:intergenic | 45.0% | |
| GATGCCGATAATGACGAAGT+AGG | + | chr7_3:71651492-71651511 | Msa1121560:CDS | 45.0% | |
| !!! | TTTTTATATTATTATGTTAA+TGG | + | chr7_3:71647047-71647066 | Msa1121560:intron | 5.0% |
| TTGTCCGCAACTACTGGACA+TGG | + | chr7_3:71645922-71645941 | Msa1121560:CDS | 50.0% | |
| TCTAGATTGGGTAGCAGCAG+TGG | + | chr7_3:71646141-71646160 | Msa1121560:CDS | 50.0% | |
| ACAGAAGAAGGAAGCTTCGC+CGG | + | chr7_3:71646188-71646207 | Msa1121560:CDS | 50.0% | |
| GAAAGTGGAAGGCAGCATGT+TGG | - | chr7_3:71646724-71646743 | None:intergenic | 50.0% | |
| !! | GGGAAGGCTTAACTTGTAGG+AGG | + | chr7_3:71646834-71646853 | Msa1121560:intron | 50.0% |
| TCACATCATCATGACTCGCG+AGG | - | chr7_3:71647736-71647755 | None:intergenic | 50.0% | |
| AGTGGAAGAAATGCGGCAAC+AGG | + | chr7_3:71648023-71648042 | Msa1121560:CDS | 50.0% | |
| AGAGGGAAGACGGCAAAGAA+TGG | - | chr7_3:71648627-71648646 | None:intergenic | 50.0% | |
| !! | TGCAGAGCATTTTCCGTCAC+AGG | + | chr7_3:71648740-71648759 | Msa1121560:intron | 50.0% |
| CACAGGAAAGGTCAAACCAG+AGG | + | chr7_3:71648757-71648776 | Msa1121560:CDS | 50.0% | |
| AGGAAAGGTCAAACCAGAGG+AGG | + | chr7_3:71648760-71648779 | Msa1121560:CDS | 50.0% | |
| TCTCGTGTTTGTTCGGTCGT+TGG | - | chr7_3:71649368-71649387 | None:intergenic | 50.0% | |
| CTAACCTACCACTGTGCTGA+TGG | + | chr7_3:71649870-71649889 | Msa1121560:intron | 50.0% | |
| ATACAGCTCCATCAGCACAG+TGG | - | chr7_3:71649881-71649900 | None:intergenic | 50.0% | |
| GGCTTATAGAGCTGCAAGGA+AGG | + | chr7_3:71649951-71649970 | Msa1121560:CDS | 50.0% | |
| GCTGCAAGGAAGGATAGTGA+TGG | + | chr7_3:71649961-71649980 | Msa1121560:CDS | 50.0% | |
| GAATCCATTGAAGGACACCG+TGG | + | chr7_3:71650357-71650376 | Msa1121560:intron | 50.0% | |
| ATGTTTGGCCATGTTCTGGC+AGG | + | chr7_3:71650605-71650624 | Msa1121560:intron | 50.0% | |
| TGTTTGGCCATGTTCTGGCA+GGG | + | chr7_3:71650606-71650625 | Msa1121560:intron | 50.0% | |
| TCATAGTCCCTGCCAGAACA+TGG | - | chr7_3:71650616-71650635 | None:intergenic | 50.0% | |
| TGTTCTGGCAGGGACTATGA+TGG | + | chr7_3:71650616-71650635 | Msa1121560:intron | 50.0% | |
| GTTCTGGCAGGGACTATGAT+GGG | + | chr7_3:71650617-71650636 | Msa1121560:intron | 50.0% | |
| TGATGGGAAAGTGACACCTG+AGG | + | chr7_3:71650633-71650652 | Msa1121560:CDS | 50.0% | |
| GGAAAACCTCGTGCTGCATT+AGG | - | chr7_3:71650893-71650912 | None:intergenic | 50.0% | |
| AGATTGGGTAGCAGCAGTGG+TGG | + | chr7_3:71646144-71646163 | Msa1121560:CDS | 55.0% | |
| ! | GGTAGCAGCAGTGGTGGAAA+TGG | + | chr7_3:71646150-71646169 | Msa1121560:CDS | 55.0% |
| ACAGCCTCATCACACTCCTC+CGG | - | chr7_3:71646210-71646229 | None:intergenic | 55.0% | |
| CATGCTGCCTTCCACTTTCC+AGG | + | chr7_3:71646725-71646744 | Msa1121560:CDS | 55.0% | |
| CGCCAAGCTTGTAGAGACAG+AGG | + | chr7_3:71647982-71648001 | Msa1121560:CDS | 55.0% | |
| GTAGCTTGAACAGCCTCCTC+TGG | - | chr7_3:71648776-71648795 | None:intergenic | 55.0% | |
| ! | TTTGCGAGGGAGGCATGAGT+TGG | + | chr7_3:71648966-71648985 | Msa1121560:intron | 55.0% |
| AGCTCCATCAGCACAGTGGT+AGG | - | chr7_3:71649877-71649896 | None:intergenic | 55.0% | |
| !! | AGAAGGTGCTGAAGGTGAGC+AGG | + | chr7_3:71649918-71649937 | Msa1121560:CDS | 55.0% |
| AGGTGAGCAGGAAGCTGAGA+AGG | + | chr7_3:71649930-71649949 | Msa1121560:CDS | 55.0% | |
| TGGGAAAGTGACACCTGAGG+AGG | + | chr7_3:71650636-71650655 | Msa1121560:CDS | 55.0% | |
| GGGGTCATTGCTCACAGACA+TGG | - | chr7_3:71650976-71650995 | None:intergenic | 55.0% | |
| TGTGAGCAATGACCCCTGAG+AGG | + | chr7_3:71650980-71650999 | Msa1121560:intron | 55.0% | |
| GAAGAAGGAAGCTTCGCCGG+AGG | + | chr7_3:71646191-71646210 | Msa1121560:CDS | 60.0% | |
| ! | TTCGCCGGAGGAGTGTGATG+AGG | + | chr7_3:71646203-71646222 | Msa1121560:CDS | 60.0% |
| ATCGCTGGCGGTTGCTAGAC+AGG | + | chr7_3:71650206-71650225 | Msa1121560:CDS | 60.0% | |
| GCAGCGGATACAACCTCCTC+AGG | - | chr7_3:71650652-71650671 | None:intergenic | 60.0% | |
| GGGAGAGGCAGCAACTCACG+AGG | + | chr7_3:71646604-71646623 | Msa1121560:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 71645766 | 71651629 | 71645766 | ID=Msa1121560;Name=Msa1121560 |
| chr7_3 | mRNA | 71645766 | 71651629 | 71645766 | ID=Msa1121560-mRNA-1;Parent=Msa1121560;Name=Msa1121560-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.84|0.57|1|1|1|14|105|760 |
| chr7_3 | exon | 71645766 | 71646373 | 71645766 | ID=Msa1121560-mRNA-1:exon:18359;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71646452 | 71646764 | 71646452 | ID=Msa1121560-mRNA-1:exon:18360;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71646853 | 71646999 | 71646853 | ID=Msa1121560-mRNA-1:exon:18361;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71647075 | 71647163 | 71647075 | ID=Msa1121560-mRNA-1:exon:18362;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71647285 | 71647377 | 71647285 | ID=Msa1121560-mRNA-1:exon:18363;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71647918 | 71648044 | 71647918 | ID=Msa1121560-mRNA-1:exon:18364;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71648595 | 71648659 | 71648595 | ID=Msa1121560-mRNA-1:exon:18365;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71648745 | 71648919 | 71648745 | ID=Msa1121560-mRNA-1:exon:18366;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71649278 | 71649469 | 71649278 | ID=Msa1121560-mRNA-1:exon:18367;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71649556 | 71649603 | 71649556 | ID=Msa1121560-mRNA-1:exon:18368;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71649895 | 71650035 | 71649895 | ID=Msa1121560-mRNA-1:exon:18369;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71650145 | 71650227 | 71650145 | ID=Msa1121560-mRNA-1:exon:18370;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71650627 | 71650742 | 71650627 | ID=Msa1121560-mRNA-1:exon:18371;Parent=Msa1121560-mRNA-1 |
| chr7_3 | exon | 71651439 | 71651629 | 71651439 | ID=Msa1121560-mRNA-1:exon:18372;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71645766 | 71646373 | 71645766 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71646452 | 71646764 | 71646452 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71646853 | 71646999 | 71646853 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71647075 | 71647163 | 71647075 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71647285 | 71647377 | 71647285 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71647918 | 71648044 | 71647918 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71648595 | 71648659 | 71648595 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71648745 | 71648919 | 71648745 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71649278 | 71649469 | 71649278 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71649556 | 71649603 | 71649556 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71649895 | 71650035 | 71649895 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71650145 | 71650227 | 71650145 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71650627 | 71650742 | 71650627 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | CDS | 71651439 | 71651524 | 71651439 | ID=Msa1121560-mRNA-1:cds;Parent=Msa1121560-mRNA-1 |
| chr7_3 | three_prime_UTR | 71651525 | 71651629 | 71651525 | ID=Msa1121560-mRNA-1:three_prime_utr;Parent=Msa1121560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
