Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029270 | XP_024625697.1 | 90.078 | 766 | 55 | 3 | 1 | 745 | 1 | 766 | 0.0 | 1363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029270 | sp|Q5ZK33|LETM1_CHICK | 43.171 | 410 | 206 | 10 | 221 | 619 | 158 | 551 | 3.25e-90 | 301 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029270 | G7KSF6 | 90.078 | 766 | 55 | 3 | 1 | 745 | 1 | 766 | 0.0 | 1363 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0635380 | Msa1029270 | 0.800513 | 1.391665e-48 | -8.615850e-47 |
| Msa0693380 | Msa1029270 | 0.806462 | 8.129309e-50 | -8.615850e-47 |
| Msa0193890 | Msa1029270 | 0.813932 | 1.992870e-51 | -8.615850e-47 |
| Msa0372340 | Msa1029270 | 0.820875 | 5.443062e-53 | -8.615850e-47 |
| Msa1029270 | Msa1075220 | -0.801767 | 7.708361e-49 | -8.615850e-47 |
| Msa1029270 | Msa1090260 | 0.805977 | 1.028599e-49 | -8.615850e-47 |
| Msa1029270 | Msa1116130 | -0.813604 | 2.353108e-51 | -8.615850e-47 |
| Msa1029270 | Msa1121560 | 0.810800 | 9.624216e-51 | -8.615850e-47 |
| Msa1029270 | Msa1129550 | 0.805652 | 1.203907e-49 | -8.615850e-47 |
| Msa1029270 | Msa1129730 | 0.808935 | 2.425494e-50 | -8.615850e-47 |
| Msa1029270 | Msa1178610 | 0.806375 | 8.481994e-50 | -8.615850e-47 |
| Msa1029270 | Msa1186950 | -0.803912 | 2.779804e-49 | -8.615850e-47 |
| Msa0269810 | Msa1029270 | 0.803729 | 3.033282e-49 | -8.615850e-47 |
| Msa0938480 | Msa1029270 | 0.802228 | 6.198030e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029270 | MtrunA17_Chr7g0249691 | 87.384 | 753 | 58 | 4 | 1 | 716 | 1 | 753 | 0.0 | 1304 |
| Msa1029270 | MtrunA17_Chr8g0380541 | 69.545 | 637 | 175 | 4 | 112 | 730 | 75 | 710 | 0.0 | 857 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029270 | AT1G65540.1 | 63.333 | 750 | 227 | 6 | 1 | 732 | 1 | 720 | 0.0 | 874 |
| Msa1029270 | AT1G65540.2 | 63.333 | 750 | 227 | 6 | 1 | 732 | 1 | 720 | 0.0 | 874 |
| Msa1029270 | AT1G65540.3 | 63.333 | 750 | 227 | 6 | 1 | 732 | 1 | 720 | 0.0 | 874 |
| Msa1029270 | AT3G59820.3 | 58.808 | 772 | 268 | 13 | 1 | 741 | 1 | 753 | 0.0 | 842 |
| Msa1029270 | AT3G59820.4 | 58.808 | 772 | 268 | 13 | 1 | 741 | 1 | 753 | 0.0 | 842 |
| Msa1029270 | AT3G59820.1 | 58.808 | 772 | 268 | 13 | 1 | 741 | 1 | 753 | 0.0 | 842 |
| Msa1029270 | AT3G59820.2 | 59.409 | 744 | 255 | 12 | 1 | 716 | 1 | 725 | 0.0 | 821 |
Find 166 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTATTGTAAAGAAATTT+TGG | 0.073274 | 7_1:-62694737 | Msa1029270:CDS |
| TTCTTTGGAGGTTTGAATTT+TGG | 0.104892 | 7_1:-62695011 | Msa1029270:CDS |
| TATCGGCATCTTCTTTCTTT+TGG | 0.137481 | 7_1:+62689543 | None:intergenic |
| GAACTCGTCGTTAAATAATT+TGG | 0.208722 | 7_1:+62693914 | None:intergenic |
| TATTGATGACGAAAGAAATT+TGG | 0.216329 | 7_1:-62691698 | Msa1029270:CDS |
| GACGATGTTGATGCTAAAAT+TGG | 0.246919 | 7_1:-62690841 | Msa1029270:CDS |
| GCATGTTGGGAAAGAGTTTC+AGG | 0.255275 | 7_1:+62694328 | None:intergenic |
| GGTGGAAGACATTGTCAAAT+TGG | 0.256061 | 7_1:-62689570 | Msa1029270:CDS |
| TCTTCCTACTTCGTCATTAT+CGG | 0.271995 | 7_1:+62689526 | None:intergenic |
| GTTTCTAATGATGAAATCTT+AGG | 0.301698 | 7_1:-62693942 | Msa1029270:CDS |
| CATGCTGCCTTCCACTTTCC+AGG | 0.310784 | 7_1:-62694310 | Msa1029270:CDS |
| ATACCAACCATTATTCTTCA+TGG | 0.316295 | 7_1:+62689430 | None:intergenic |
| ATTTATCATAGTTCCATTCA+TGG | 0.344354 | 7_1:-62694370 | Msa1029270:CDS |
| AACTACTTTGGGCTGATGTT+AGG | 0.348834 | 7_1:-62694506 | Msa1029270:CDS |
| AATCCACTCTGCAACACTAT+TGG | 0.356452 | 7_1:-62694539 | Msa1029270:CDS |
| TCCTTGGATTCTCAAGTGTT+GGG | 0.357810 | 7_1:-62695193 | Msa1029270:CDS |
| TTTCATTGCCTAGGGATGAT+TGG | 0.358649 | 7_1:-62694596 | Msa1029270:intron |
| TTCTGCTAATCAATCTAGAT+TGG | 0.362306 | 7_1:-62694907 | Msa1029270:CDS |
| CACAGTATCTTGAAGAAACT+TGG | 0.366611 | 7_1:+62694142 | None:intergenic |
| GGTTTGGAACAAAACTACTT+TGG | 0.368031 | 7_1:-62694518 | Msa1029270:CDS |
| TATCTCTTCTCGTGTTTGTT+CGG | 0.372851 | 7_1:+62691651 | None:intergenic |
| GTTTGGAACAAAACTACTTT+GGG | 0.376079 | 7_1:-62694517 | Msa1029270:CDS |
| TTCATTGCCTAGGGATGATT+GGG | 0.378149 | 7_1:-62694595 | Msa1029270:intron |
| TTTGAATCTAGTGAATTAGA+TGG | 0.381374 | 7_1:-62695158 | Msa1029270:CDS |
| AAGGGAAAGAAATAAGAATA+TGG | 0.383727 | 7_1:-62695069 | Msa1029270:CDS |
| TCTCGTGTTTGTTCGGTCGT+TGG | 0.384664 | 7_1:+62691658 | None:intergenic |
| TGGGCTATGATTCTAGGAAT+TGG | 0.386057 | 7_1:-62694717 | Msa1029270:CDS |
| ATGTATCTGAAGGACACTTT+AGG | 0.397048 | 7_1:-62690349 | Msa1029270:CDS |
| AAAGGTTGCTGATAAGTTCA+TGG | 0.397105 | 7_1:+62690314 | None:intergenic |
| ATAAACAGATGGGAAAATAT+TGG | 0.403532 | 7_1:-62689591 | Msa1029270:intron |
| AAATATGCATCAGTACCATA+TGG | 0.406722 | 7_1:+62693710 | None:intergenic |
| ATCGCTGGCGGTTGCTAGAC+AGG | 0.407192 | 7_1:-62690816 | Msa1029270:intron |
| TTCTTTGCCAGATGAGGTTG+TGG | 0.409605 | 7_1:-62692227 | Msa1029270:CDS |
| ATCCTTGGATTCTCAAGTGT+TGG | 0.414004 | 7_1:-62695194 | Msa1029270:CDS |
| GGAAAGAGTTTCAGGAATAC+TGG | 0.418429 | 7_1:+62694336 | None:intergenic |
| GAGCTGTATAATAGTATGAT+AGG | 0.419632 | 7_1:-62691131 | Msa1029270:CDS |
| CCTGTTCTTTCATCTTATCC+TGG | 0.422082 | 7_1:+62694292 | None:intergenic |
| GAAGGATAGTGATGGTGCTT+TGG | 0.422692 | 7_1:-62691054 | Msa1029270:CDS |
| ATGGAAAGAGTCTTTCTAGA+AGG | 0.422702 | 7_1:-62694452 | Msa1029270:CDS |
| CAACATACTCGCGTTATCCT+TGG | 0.422947 | 7_1:-62695209 | Msa1029270:CDS |
| TAATGGTTGGTATGTATTCA+TGG | 0.426343 | 7_1:-62689420 | Msa1029270:three_prime_UTR |
| TAAGAATATGGAAGATTGTT+CGG | 0.427499 | 7_1:-62695057 | Msa1029270:CDS |
| GGTAGCAGCAGTGGTGGAAA+TGG | 0.428127 | 7_1:-62694885 | Msa1029270:CDS |
| TCAAGATACTGTGAAAGAAA+TGG | 0.428407 | 7_1:-62694132 | Msa1029270:CDS |
| GGGCAAAGAAGTTAAGTCAT+TGG | 0.435701 | 7_1:-62694575 | Msa1029270:CDS |
| ACTCTGCAACACTATTGGTT+TGG | 0.436211 | 7_1:-62694534 | Msa1029270:CDS |
| ACAGTATCCACAACCTCATC+TGG | 0.436535 | 7_1:+62692220 | None:intergenic |
| GACAAAATAGCTCGGAAAGC+TGG | 0.436635 | 7_1:+62694693 | None:intergenic |
| ACAAACACGAGAAGAGATAA+AGG | 0.437299 | 7_1:-62691647 | Msa1029270:CDS |
| GTAGCTTGAACAGCCTCCTC+TGG | 0.437673 | 7_1:+62692256 | None:intergenic |
| TAATGAAGTGATTGAACAAA+AGG | 0.438841 | 7_1:+62695234 | None:intergenic |
| GTGGAAGACATTGTCAAATT+GGG | 0.440816 | 7_1:-62689569 | Msa1029270:CDS |
| AATGTAACCATGAAGAATAA+TGG | 0.440989 | 7_1:-62689437 | Msa1029270:three_prime_UTR |
| TACTTGAATAATTTCTTTGG+AGG | 0.441522 | 7_1:-62695023 | Msa1029270:CDS |
| AGGAAATGAAACGGACACTT+TGG | 0.442968 | 7_1:+62694934 | None:intergenic |
| AGAGAAAGAGGAAGAGAAGC+AGG | 0.444591 | 7_1:-62691737 | Msa1029270:CDS |
| AAGTGTCCGTTTCATTTCCT+CGG | 0.445858 | 7_1:-62694931 | Msa1029270:CDS |
| CTTCCCTCTTGATTCTCTCT+AGG | 0.448680 | 7_1:-62692391 | Msa1029270:intron |
| AGCAACCTTTCGAAGGATAG+TGG | 0.451344 | 7_1:-62690301 | Msa1029270:intron |
| AAAGTGGAAGGCAGCATGTT+GGG | 0.451596 | 7_1:+62694315 | None:intergenic |
| GGAAATGAAACGGACACTTT+GGG | 0.451674 | 7_1:+62694935 | None:intergenic |
| ATGAGGTTGTGGATACTGTT+GGG | 0.454721 | 7_1:-62692216 | Msa1029270:CDS |
| AGTGGAAGAAATGCGGCAAC+AGG | 0.459331 | 7_1:-62693007 | Msa1029270:intron |
| GGAGGAAGAGAAAGAGAAAG+AGG | 0.462689 | 7_1:-62691749 | Msa1029270:CDS |
| TTTGCAGCTTAATGACTGGC+TGG | 0.464751 | 7_1:-62692441 | Msa1029270:intron |
| TAGTTTCTCTTTCGAGATTG+AGG | 0.467564 | 7_1:-62694965 | Msa1029270:CDS |
| AGTAGTTGCGGACAAAGAAA+AGG | 0.469228 | 7_1:+62695121 | None:intergenic |
| CCAGGATAAGATGAAAGAAC+AGG | 0.469685 | 7_1:-62694292 | Msa1029270:intron |
| TGGTTTGACCTTTCCTGTGA+CGG | 0.471702 | 7_1:+62692276 | None:intergenic |
| GGCAATAGAATCTCCATGAA+TGG | 0.471876 | 7_1:+62694357 | None:intergenic |
| TGTAGGAGGCATTGAAAAGA+AGG | 0.477179 | 7_1:-62694187 | Msa1029270:intron |
| TGTAGAGACAGAGGATTGCT+TGG | 0.477214 | 7_1:-62693039 | Msa1029270:CDS |
| ACTATGATAAATACAGCAAA+AGG | 0.479877 | 7_1:+62694381 | None:intergenic |
| AGAAGGTGCTGAAGGTGAGC+AGG | 0.481402 | 7_1:-62691105 | Msa1029270:CDS |
| ATCAATAGATTCTGTCACTT+TGG | 0.483114 | 7_1:+62691714 | None:intergenic |
| TCACTTTGGATAACATTAGC+AGG | 0.483499 | 7_1:-62693893 | Msa1029270:intron |
| TTTCTTTGCAGCTTAATGAC+TGG | 0.493232 | 7_1:-62692445 | Msa1029270:intron |
| GGCTTATAGAGCTGCAAGGA+AGG | 0.496015 | 7_1:-62691072 | Msa1029270:CDS |
| TTAATGGAACAGGTCAGAAC+AGG | 0.498584 | 7_1:-62693972 | Msa1029270:intron |
| TACATAGGTATCATCCCATA+TGG | 0.499524 | 7_1:-62693725 | Msa1029270:CDS |
| AGGTGAGCAGGAAGCTGAGA+AGG | 0.501001 | 7_1:-62691093 | Msa1029270:CDS |
| ATCTGATACTAAACAGAAGA+AGG | 0.502056 | 7_1:-62694859 | Msa1029270:CDS |
| TCTGCTAATCAATCTAGATT+GGG | 0.505305 | 7_1:-62694906 | Msa1029270:CDS |
| TCTAATTCACTAGATTCAAA+TGG | 0.508701 | 7_1:+62695161 | None:intergenic |
| ATGGATAAACAGGCCTCGCT+TGG | 0.508997 | 7_1:-62693762 | Msa1029270:intron |
| TTGCAAGATCAGCCAAGCAT+TGG | 0.512037 | 7_1:-62691596 | Msa1029270:CDS |
| ACTCTCTTCTTTGCCAGATG+AGG | 0.512039 | 7_1:-62692233 | Msa1029270:CDS |
| AGAGGGAAGACGACAAAGAA+TGG | 0.513113 | 7_1:+62692405 | None:intergenic |
| ATAGATTCAATACTCTTATG+TGG | 0.518099 | 7_1:+62694753 | None:intergenic |
| ATCCTCTGTCTCTACAAGCT+TGG | 0.518916 | 7_1:+62693046 | None:intergenic |
| ACAGAAGAAGGAAGCTTCGC+CGG | 0.519003 | 7_1:-62694847 | Msa1029270:CDS |
| AATAGTATGATAGGCAAAGA+AGG | 0.523272 | 7_1:-62691122 | Msa1029270:CDS |
| AAGGACACTTTAGGAAAAGA+AGG | 0.523689 | 7_1:-62690340 | Msa1029270:CDS |
| ATGCTAAAACAGCCAATGCT+TGG | 0.528417 | 7_1:+62691584 | None:intergenic |
| ATTTAACGACGAGTTCACTT+TGG | 0.528523 | 7_1:-62693907 | Msa1029270:CDS |
| TGTTCTGGCAGGGACTATGA+TGG | 0.528563 | 7_1:-62690406 | Msa1029270:intron |
| GATGAGGTTGTGGATACTGT+TGG | 0.531339 | 7_1:-62692217 | Msa1029270:CDS |
| TCTAGAAAGACTCTTTCCAT+TGG | 0.533287 | 7_1:+62694455 | None:intergenic |
| AAATTTGGCTACGGAAGAGA+TGG | 0.534867 | 7_1:-62691683 | Msa1029270:CDS |
| TTTCATCTTATCCTGGAAAG+TGG | 0.538647 | 7_1:+62694299 | None:intergenic |
| TCCAAAACAAAATCTTCAGA+AGG | 0.546923 | 7_1:+62692181 | None:intergenic |
| TTCTTCAGCACTTGTTGACA+AGG | 0.547951 | 7_1:-62691009 | Msa1029270:intron |
| AACAGATGGGAAAATATTGG+TGG | 0.553061 | 7_1:-62689588 | Msa1029270:intron |
| AATATGCATCAGTACCATAT+GGG | 0.557193 | 7_1:+62693711 | None:intergenic |
| GTAGTTGCGGACAAAGAAAA+GGG | 0.558552 | 7_1:+62695122 | None:intergenic |
| ATGCTAAAATTGGAGATCGC+TGG | 0.559815 | 7_1:-62690831 | Msa1029270:CDS |
| TGGAAAGAGTCTTTCTAGAA+GGG | 0.561378 | 7_1:-62694451 | Msa1029270:CDS |
| GCAGCGGATACAAACTCCTC+AGG | 0.561795 | 7_1:+62690373 | None:intergenic |
| TTGTCCGCAACTACTGGACA+TGG | 0.563773 | 7_1:-62695113 | Msa1029270:CDS |
| ATCTTATCCTGGAAAGTGGA+AGG | 0.564217 | 7_1:+62694303 | None:intergenic |
| GTAAACATGTGTAAATACAT+AGG | 0.566361 | 7_1:-62693740 | Msa1029270:CDS |
| TTTCTCTTTCGAGATTGAGG+TGG | 0.567071 | 7_1:-62694962 | Msa1029270:CDS |
| TTATTGTTAAAACTTGCCAA+TGG | 0.570263 | 7_1:-62694471 | Msa1029270:CDS |
| TCCCAACACTTGAGAATCCA+AGG | 0.570465 | 7_1:+62695192 | None:intergenic |
| GATAAACTGATTCAAGAAGA+AGG | 0.570696 | 7_1:-62693099 | Msa1029270:CDS |
| TGCTCATCGACAAAATAGCT+CGG | 0.572861 | 7_1:+62694685 | None:intergenic |
| GATGCCGATAATGACGAAGT+AGG | 0.574789 | 7_1:-62689530 | Msa1029270:CDS |
| ATGATTCACATGAACATGGA+AGG | 0.581121 | 7_1:-62695088 | Msa1029270:CDS |
| TACCATAAAAGCGAAAGCTA+AGG | 0.584560 | 7_1:-62694793 | Msa1029270:CDS |
| TAACCATGAAGAATAATGGT+TGG | 0.587475 | 7_1:-62689433 | Msa1029270:three_prime_UTR |
| GTTCTGGCAGGGACTATGAT+GGG | 0.587747 | 7_1:-62690405 | Msa1029270:intron |
| AAAGAAGTTAAGTCATTGGA+AGG | 0.587927 | 7_1:-62694571 | Msa1029270:CDS |
| TGTGAAAGAAATGGCGAAGG+AGG | 0.589070 | 7_1:-62694123 | Msa1029270:CDS |
| GTGAATTAGATGGCTTGAGT+CGG | 0.589239 | 7_1:-62695148 | Msa1029270:CDS |
| TCTAGATTGGGTAGCAGCAG+TGG | 0.589930 | 7_1:-62694894 | Msa1029270:CDS |
| ACAAAGTGGAGAAATGAAGC+AGG | 0.592012 | 7_1:-62694090 | Msa1029270:CDS |
| TGACGAAAGAAATTTGGCTA+CGG | 0.593538 | 7_1:-62691692 | Msa1029270:CDS |
| AGATTGGGTAGCAGCAGTGG+TGG | 0.595026 | 7_1:-62694891 | Msa1029270:CDS |
| GGAAGTCGCTATTAGTGACA+AGG | 0.596095 | 7_1:-62691033 | Msa1029270:CDS |
| ATCCGCTGCTATGTATCTGA+AGG | 0.599069 | 7_1:-62690359 | Msa1029270:CDS |
| AGAGTCTTTCTAGAAGGGAG+AGG | 0.599255 | 7_1:-62694446 | Msa1029270:CDS |
| CAGAAGCCGAGGAAATGAAA+CGG | 0.599261 | 7_1:+62694925 | None:intergenic |
| TTACACATGTTTACCAAGCG+AGG | 0.599619 | 7_1:+62693749 | None:intergenic |
| ATGTCCATGTCCAGTAGTTG+CGG | 0.601443 | 7_1:+62695109 | None:intergenic |
| ATTGCTTGGATTGCGTTCAG+TGG | 0.602150 | 7_1:-62693025 | Msa1029270:CDS |
| GAAAGTGGAAGGCAGCATGT+TGG | 0.605293 | 7_1:+62694314 | None:intergenic |
| ACAGCCTCATCACACTCCTC+CGG | 0.605444 | 7_1:+62694828 | None:intergenic |
| ACTTATCAGCAACCTTTCGA+AGG | 0.609157 | 7_1:-62690308 | Msa1029270:CDS |
| CGCCAAGCTTGTAGAGACAG+AGG | 0.613316 | 7_1:-62693048 | Msa1029270:CDS |
| ACTGATTCAAGAAGAAGGCG+TGG | 0.616468 | 7_1:-62693094 | Msa1029270:CDS |
| AAATTCACAAATAGACACTA+CGG | 0.618279 | 7_1:+62689486 | None:intergenic |
| TCTTGACGAATTTATGAACA+AGG | 0.622171 | 7_1:-62694057 | Msa1029270:intron |
| ACTAACCACTATCCTTCGAA+AGG | 0.626702 | 7_1:+62690296 | None:intergenic |
| CTAAAATTGGAGATCGCTGG+CGG | 0.627897 | 7_1:-62690828 | Msa1029270:CDS |
| ATAGGCAAAGAAGGTGCTGA+AGG | 0.629822 | 7_1:-62691113 | Msa1029270:CDS |
| TGATTCACATGAACATGGAA+GGG | 0.630828 | 7_1:-62695087 | Msa1029270:CDS |
| TACTGTGAAAGAAATGGCGA+AGG | 0.632448 | 7_1:-62694126 | Msa1029270:CDS |
| ACGAGAAGAGATAAAGGCAA+AGG | 0.633542 | 7_1:-62691641 | Msa1029270:CDS |
| GAGGTTCAGAATTTACAAAG+TGG | 0.634082 | 7_1:-62694104 | Msa1029270:CDS |
| GAAGAAGGAAGCTTCGCCGG+AGG | 0.638107 | 7_1:-62694844 | Msa1029270:CDS |
| GGACATGATTCACATGAACA+TGG | 0.639098 | 7_1:-62695092 | Msa1029270:CDS |
| AGGAAAGGTCAAACCAGAGG+AGG | 0.639949 | 7_1:-62692269 | Msa1029270:CDS |
| TGCGTTCAGTGGAAGAAATG+CGG | 0.646423 | 7_1:-62693014 | Msa1029270:CDS |
| GATACCTAGAGAGAATCAAG+AGG | 0.650724 | 7_1:+62692387 | None:intergenic |
| TTCGCCGGAGGAGTGTGATG+AGG | 0.652757 | 7_1:-62694832 | Msa1029270:CDS |
| ATACCTAGAGAGAATCAAGA+GGG | 0.653393 | 7_1:+62692388 | None:intergenic |
| GGGAGAGGCAGCAACTCACG+AGG | 0.658654 | 7_1:-62694431 | Msa1029270:CDS |
| CACAGGAAAGGTCAAACCAG+AGG | 0.670593 | 7_1:-62692272 | Msa1029270:CDS |
| AAACCAATAGTGTTGCAGAG+TGG | 0.672055 | 7_1:+62694536 | None:intergenic |
| TGAGGTTGTGGATACTGTTG+GGG | 0.672297 | 7_1:-62692215 | Msa1029270:CDS |
| GCTGCAAGGAAGGATAGTGA+TGG | 0.674240 | 7_1:-62691062 | Msa1029270:CDS |
| GTCCTTCAGATACATAGCAG+CGG | 0.678318 | 7_1:+62690357 | None:intergenic |
| AGAAGGCTTATAGAGCTGCA+AGG | 0.679594 | 7_1:-62691076 | Msa1029270:CDS |
| AGATTGATTAGCAGAAGCCG+AGG | 0.681211 | 7_1:+62694914 | None:intergenic |
| AAGTGGAGAAATGAAGCAGG+CGG | 0.695790 | 7_1:-62694087 | Msa1029270:CDS |
| TGATGGGAAAGTGACACCTG+AGG | 0.742826 | 7_1:-62690389 | Msa1029270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATATTATTCTACATT+TGG | - | chr7_1:62693397-62693416 | Msa1029270:intron | 10.0% |
| !!! | TTTTACTTGAATAATTTCTT+TGG | - | chr7_1:62689658-62689677 | Msa1029270:intron | 15.0% |
| !!! | AATCTATTGTAAAGAAATTT+TGG | - | chr7_1:62689947-62689966 | Msa1029270:intron | 15.0% |
| !!! | ATCTATTGTAAAGAAATTTT+GGG | - | chr7_1:62689948-62689967 | Msa1029270:intron | 15.0% |
| !!! | TTTTATTATCACTCAATTTT+GGG | - | chr7_1:62690463-62690482 | Msa1029270:intron | 15.0% |
| !! | AAGATAATGTCTTAAAAATA+AGG | - | chr7_1:62692010-62692029 | Msa1029270:intron | 15.0% |
| !! | AGATAATGTCTTAAAAATAA+GGG | - | chr7_1:62692011-62692030 | Msa1029270:intron | 15.0% |
| !! | AATAAGAAAATCAACATATT+TGG | + | chr7_1:62692844-62692863 | None:intergenic | 15.0% |
| !! | TTGCATATGAAAAATTATAA+GGG | + | chr7_1:62694223-62694242 | None:intergenic | 15.0% |
| !! | ATTGCATATGAAAAATTATA+AGG | + | chr7_1:62694224-62694243 | None:intergenic | 15.0% |
| !!! | ACATTTTCATATTAAGATAT+TGG | + | chr7_1:62695026-62695045 | None:intergenic | 15.0% |
| !!! | CTTTTATTATCACTCAATTT+TGG | - | chr7_1:62690462-62690481 | Msa1029270:intron | 20.0% |
| !! | TATTATTATGTTAATGGAAC+AGG | - | chr7_1:62690702-62690721 | Msa1029270:intron | 20.0% |
| !!! | TCTTCTTGTATTTTACATTA+AGG | - | chr7_1:62691342-62691361 | Msa1029270:intron | 20.0% |
| !!! | CTTCTTGTATTTTACATTAA+GGG | - | chr7_1:62691343-62691362 | Msa1029270:intron | 20.0% |
| !! | GTTAATAATAAACGTTTCAA+TGG | - | chr7_1:62691699-62691718 | Msa1029270:CDS | 20.0% |
| !! | TAGTAATTCCAATAAGAAAT+TGG | - | chr7_1:62692090-62692109 | Msa1029270:intron | 20.0% |
| !! | TGACATTTACATAATATAGT+TGG | - | chr7_1:62692134-62692153 | Msa1029270:intron | 20.0% |
| !!! | TTTTCAAAAATGACTTATGT+AGG | + | chr7_1:62692750-62692769 | None:intergenic | 20.0% |
| !! | TTCCAACTATTAATAATCTT+TGG | - | chr7_1:62693154-62693173 | Msa1029270:intron | 20.0% |
| !! | AACCAAAGATTATTAATAGT+TGG | + | chr7_1:62693159-62693178 | None:intergenic | 20.0% |
| !! | AATAATCTTTGGTTAATGAT+TGG | - | chr7_1:62693165-62693184 | Msa1029270:intron | 20.0% |
| !!! | TTTTTTATGAAACAAAAGCT+GGG | + | chr7_1:62693505-62693524 | None:intergenic | 20.0% |
| !!! | ATTTTTTATGAAACAAAAGC+TGG | + | chr7_1:62693506-62693525 | None:intergenic | 20.0% |
| !! | TTAATCATATTGTTCTTTCA+AGG | + | chr7_1:62693915-62693934 | None:intergenic | 20.0% |
| !! | AATTTGCATAAAGAAAACAA+TGG | + | chr7_1:62693941-62693960 | None:intergenic | 20.0% |
| !!! | CATTCATATTTGCTAATTTT+TGG | + | chr7_1:62694449-62694468 | None:intergenic | 20.0% |
| !! | TCGTAATTCATAACTATAAA+AGG | - | chr7_1:62694728-62694747 | Msa1029270:CDS | 20.0% |
| !! | TAATTCATAACTATAAAAGG+AGG | - | chr7_1:62694731-62694750 | Msa1029270:CDS | 20.0% |
| !! | TTATGGTGAAATTATAAAGT+TGG | - | chr7_1:62694907-62694926 | Msa1029270:CDS | 20.0% |
| !! | TATGGTGAAATTATAAAGTT+GGG | - | chr7_1:62694908-62694927 | Msa1029270:CDS | 20.0% |
| !! | TTATGTTAATCATAAACAGA+TGG | - | chr7_1:62695082-62695101 | Msa1029270:CDS | 20.0% |
| !! | TATGTTAATCATAAACAGAT+GGG | - | chr7_1:62695083-62695102 | Msa1029270:CDS | 20.0% |
| ! | TAATGAAGTGATTGAACAAA+AGG | + | chr7_1:62689453-62689472 | None:intergenic | 25.0% |
| ! | TCTAATTCACTAGATTCAAA+TGG | + | chr7_1:62689526-62689545 | None:intergenic | 25.0% |
| ! | TTTGAATCTAGTGAATTAGA+TGG | - | chr7_1:62689526-62689545 | Msa1029270:CDS | 25.0% |
| ! | AAGGGAAAGAAATAAGAATA+TGG | - | chr7_1:62689615-62689634 | Msa1029270:intron | 25.0% |
| ! | TAAGAATATGGAAGATTGTT+CGG | - | chr7_1:62689627-62689646 | Msa1029270:intron | 25.0% |
| ! | TACTTGAATAATTTCTTTGG+AGG | - | chr7_1:62689661-62689680 | Msa1029270:intron | 25.0% |
| ! | ATAGATTCAATACTCTTATG+TGG | + | chr7_1:62689934-62689953 | None:intergenic | 25.0% |
| ! | TTATTGTTAAAACTTGCCAA+TGG | - | chr7_1:62690213-62690232 | Msa1029270:intron | 25.0% |
| ! | ACTATGATAAATACAGCAAA+AGG | + | chr7_1:62690306-62690325 | None:intergenic | 25.0% |
| ! | ATTTATCATAGTTCCATTCA+TGG | - | chr7_1:62690314-62690333 | Msa1029270:CDS | 25.0% |
| ! | GTTTCTAATGATGAAATCTT+AGG | - | chr7_1:62690742-62690761 | Msa1029270:intron | 25.0% |
| ! | GTAAACATGTGTAAATACAT+AGG | - | chr7_1:62690944-62690963 | Msa1029270:intron | 25.0% |
| ! | GTTATCACATAAAGGAAAAA+AGG | + | chr7_1:62691045-62691064 | None:intergenic | 25.0% |
| ! | TAATCAGAGTTATCACATAA+AGG | + | chr7_1:62691053-62691072 | None:intergenic | 25.0% |
| ! | TTATGTGATAACTCTGATTA+TGG | - | chr7_1:62691053-62691072 | Msa1029270:CDS | 25.0% |
| ! | TATCATTCATTGTCTCTTAT+AGG | - | chr7_1:62691084-62691103 | Msa1029270:CDS | 25.0% |
| ! | GTAGTACATAATTGAATTGT+AGG | - | chr7_1:62691295-62691314 | Msa1029270:intron | 25.0% |
| ! | GAAATACTCAATACATACAT+GGG | - | chr7_1:62691317-62691336 | Msa1029270:intron | 25.0% |
| !! | ATTTCTAAAAGTAGCCATTA+TGG | + | chr7_1:62691809-62691828 | None:intergenic | 25.0% |
| !! | ATTTTTGAATGCTATTGTGT+TGG | - | chr7_1:62691978-62691997 | Msa1029270:intron | 25.0% |
| ! | CAAAACATAAATATCTCTGA+TGG | + | chr7_1:62692605-62692624 | None:intergenic | 25.0% |
| ! | ATGAAAATTCTACGATCTAA+TGG | + | chr7_1:62692653-62692672 | None:intergenic | 25.0% |
| ! | TAGTAGGAAGAAATATAGAA+TGG | - | chr7_1:62692692-62692711 | Msa1029270:intron | 25.0% |
| ! | AAGAAATATAGAATGGAAGA+GGG | - | chr7_1:62692699-62692718 | Msa1029270:intron | 25.0% |
| ! | ATGGTTGCAAGATATTTAAT+AGG | - | chr7_1:62692911-62692930 | Msa1029270:intron | 25.0% |
| !!! | TATTGATGACGAAAGAAATT+TGG | - | chr7_1:62692986-62693005 | Msa1029270:intron | 25.0% |
| ! | GATTCTCCTTATAAAAATCA+CGG | + | chr7_1:62694039-62694058 | None:intergenic | 25.0% |
| !! | ATAAGTGTCATTCAAATGTT+TGG | - | chr7_1:62694252-62694271 | Msa1029270:intron | 25.0% |
| ! | CTTTATAATTTCACCATAAG+AGG | + | chr7_1:62694906-62694925 | None:intergenic | 25.0% |
| ! | ATAAACAGATGGGAAAATAT+TGG | - | chr7_1:62695093-62695112 | Msa1029270:CDS | 25.0% |
| ! | AAATTCACAAATAGACACTA+CGG | + | chr7_1:62695201-62695220 | None:intergenic | 25.0% |
| ! | AATGTAACCATGAAGAATAA+TGG | - | chr7_1:62695247-62695266 | Msa1029270:CDS | 25.0% |
| ! | GAGTGATTTTGCAAAAGAAA+AGG | - | chr7_1:62689425-62689444 | Msa1029270:three_prime_UTR | 30.0% |
| !! | TTCTTTGGAGGTTTGAATTT+TGG | - | chr7_1:62689673-62689692 | Msa1029270:intron | 30.0% |
| TTCTGCTAATCAATCTAGAT+TGG | - | chr7_1:62689777-62689796 | Msa1029270:intron | 30.0% | |
| TCTGCTAATCAATCTAGATT+GGG | - | chr7_1:62689778-62689797 | Msa1029270:intron | 30.0% | |
| ATCTGATACTAAACAGAAGA+AGG | - | chr7_1:62689825-62689844 | Msa1029270:intron | 30.0% | |
| ! | AAATTTTGGGCTATGATTCT+AGG | - | chr7_1:62689961-62689980 | Msa1029270:intron | 30.0% |
| ACATCACACTTAAAAACAAG+AGG | + | chr7_1:62690041-62690060 | None:intergenic | 30.0% | |
| AAAGAAGTTAAGTCATTGGA+AGG | - | chr7_1:62690113-62690132 | Msa1029270:intron | 30.0% | |
| ! | GTTTGGAACAAAACTACTTT+GGG | - | chr7_1:62690167-62690186 | Msa1029270:intron | 30.0% |
| !! | GGCAAGTTTTAACAATAATC+TGG | + | chr7_1:62690211-62690230 | None:intergenic | 30.0% |
| AAACATTATCTGCCTATCTA+CGG | - | chr7_1:62690435-62690454 | Msa1029270:intron | 30.0% | |
| !! | ATTATCACTCAATTTTGGGA+AGG | - | chr7_1:62690467-62690486 | Msa1029270:intron | 30.0% |
| TCAAGATACTGTGAAAGAAA+TGG | - | chr7_1:62690552-62690571 | Msa1029270:intron | 30.0% | |
| TCTTGACGAATTTATGAACA+AGG | - | chr7_1:62690627-62690646 | Msa1029270:intron | 30.0% | |
| GAACTCGTCGTTAAATAATT+TGG | + | chr7_1:62690773-62690792 | None:intergenic | 30.0% | |
| !!! | ATGTCTTTTGGTTTCGAAAA+TGG | - | chr7_1:62690903-62690922 | Msa1029270:intron | 30.0% |
| AATATGCATCAGTACCATAT+GGG | + | chr7_1:62690976-62690995 | None:intergenic | 30.0% | |
| AAATATGCATCAGTACCATA+TGG | + | chr7_1:62690977-62690996 | None:intergenic | 30.0% | |
| ! | CTTACTTCTGTAATCTTTTG+CGG | + | chr7_1:62691012-62691031 | None:intergenic | 30.0% |
| !!! | TCGTATTTTTTCGTTTTGTC+TGG | - | chr7_1:62691176-62691195 | Msa1029270:intron | 30.0% |
| !! | CGTTTTGTCTGGTTTAAATA+AGG | - | chr7_1:62691187-62691206 | Msa1029270:intron | 30.0% |
| GGAAATACTCAATACATACA+TGG | - | chr7_1:62691316-62691335 | Msa1029270:intron | 30.0% | |
| ! | CTTGTATTTTACATTAAGGG+TGG | - | chr7_1:62691346-62691365 | Msa1029270:intron | 30.0% |
| AAGTTCCAATGTTATTGTTG+TGG | - | chr7_1:62691466-62691485 | Msa1029270:CDS | 30.0% | |
| AGTTCCAATGTTATTGTTGT+GGG | - | chr7_1:62691467-62691486 | Msa1029270:CDS | 30.0% | |
| !! | TTGAATTGTTTTGCTTTGAC+AGG | - | chr7_1:62691550-62691569 | Msa1029270:intron | 30.0% |
| ! | GATAAACTGATTCAAGAAGA+AGG | - | chr7_1:62691585-62691604 | Msa1029270:CDS | 30.0% |
| TTTCAATGGAATTTGTGTAC+TGG | - | chr7_1:62691713-62691732 | Msa1029270:CDS | 30.0% | |
| CTAGTAAAGTAACACATTGT+TGG | + | chr7_1:62691757-62691776 | None:intergenic | 30.0% | |
| !! | AATGTGTTACTTTACTAGCT+GGG | - | chr7_1:62691759-62691778 | Msa1029270:intron | 30.0% |
| ! | AATTTTTGTGAACGAGAAAC+TGG | - | chr7_1:62691783-62691802 | Msa1029270:intron | 30.0% |
| ! | TCTGAAACTGCAAAAAAAGA+AGG | + | chr7_1:62691844-62691863 | None:intergenic | 30.0% |
| AAATAAGTTCGACAAGAAGA+AGG | + | chr7_1:62691900-62691919 | None:intergenic | 30.0% | |
| GTCTTAAAAATAAGGGTTGT+AGG | - | chr7_1:62692018-62692037 | Msa1029270:intron | 30.0% | |
| GGTTGTAGGTAAAATCTTAT+AGG | - | chr7_1:62692032-62692051 | Msa1029270:intron | 30.0% | |
| GGAATGAGAAATACTGTATT+AGG | - | chr7_1:62692053-62692072 | Msa1029270:intron | 30.0% | |
| CTTCTCTACCAATTTCTTAT+TGG | + | chr7_1:62692101-62692120 | None:intergenic | 30.0% | |
| CAATAAGAAATTGGTAGAGA+AGG | - | chr7_1:62692099-62692118 | Msa1029270:intron | 30.0% | |
| AATTTACAACCCTCAAACAT+GGG | + | chr7_1:62692214-62692233 | None:intergenic | 30.0% | |
| CAAGAAGGGAAATACTTATA+AGG | + | chr7_1:62692350-62692369 | None:intergenic | 30.0% | |
| ATGACTATGCATTTCAAGAA+GGG | + | chr7_1:62692364-62692383 | None:intergenic | 30.0% | |
| TCCAAAACAAAATCTTCAGA+AGG | + | chr7_1:62692506-62692525 | None:intergenic | 30.0% | |
| GTTGGAATAAATTGAAATGC+AGG | - | chr7_1:62692538-62692557 | Msa1029270:intron | 30.0% | |
| AACATAAATATCTCTGATGG+CGG | + | chr7_1:62692602-62692621 | None:intergenic | 30.0% | |
| ! | AGAGATATTTATGTTTTGCG+AGG | - | chr7_1:62692607-62692626 | Msa1029270:intron | 30.0% |
| ! | GAGATATTTATGTTTTGCGA+GGG | - | chr7_1:62692608-62692627 | Msa1029270:intron | 30.0% |
| TATACGTAATGAAGTCTAGT+AGG | - | chr7_1:62692676-62692695 | Msa1029270:intron | 30.0% | |
| GAAGAAATATAGAATGGAAG+AGG | - | chr7_1:62692698-62692717 | Msa1029270:intron | 30.0% | |
| AGAAATATAGAATGGAAGAG+GGG | - | chr7_1:62692700-62692719 | Msa1029270:intron | 30.0% | |
| TGGATGACAATAGTTGAAAA+AGG | + | chr7_1:62692800-62692819 | None:intergenic | 30.0% | |
| GATTCAGATACAATGTTGAT+TGG | + | chr7_1:62692820-62692839 | None:intergenic | 30.0% | |
| TATTGAAGTTGCTATGCTTT+CGG | - | chr7_1:62692860-62692879 | Msa1029270:intron | 30.0% | |
| ! | TGCTTTAGATTTGAGATTGA+TGG | - | chr7_1:62692892-62692911 | Msa1029270:intron | 30.0% |
| GTTGCAAGATATTTAATAGG+AGG | - | chr7_1:62692914-62692933 | Msa1029270:intron | 30.0% | |
| ! | ATCAATAGATTCTGTCACTT+TGG | + | chr7_1:62692973-62692992 | None:intergenic | 30.0% |
| !!! | GTTTTTGAGGCTTGTTAAAA+AGG | - | chr7_1:62693240-62693259 | Msa1029270:intron | 30.0% |
| TCAAAGTCTTGAAACTCAAA+TGG | - | chr7_1:62693323-62693342 | Msa1029270:intron | 30.0% | |
| !!! | AAGTGTTGAACTTAGCTTTT+TGG | - | chr7_1:62693369-62693388 | Msa1029270:intron | 30.0% |
| TTATTCTACATTTGGTATGC+AGG | - | chr7_1:62693405-62693424 | Msa1029270:intron | 30.0% | |
| GAGCTGTATAATAGTATGAT+AGG | - | chr7_1:62693553-62693572 | Msa1029270:intron | 30.0% | |
| AATAGTATGATAGGCAAAGA+AGG | - | chr7_1:62693562-62693581 | Msa1029270:intron | 30.0% | |
| AATGCCTGAATTACATTCTT+AGG | - | chr7_1:62693785-62693804 | Msa1029270:intron | 30.0% | |
| TCAACCTAAGAATGTAATTC+AGG | + | chr7_1:62693792-62693811 | None:intergenic | 30.0% | |
| !!! | CAATTTCTTTTTCAAGTGTC+TGG | + | chr7_1:62693824-62693843 | None:intergenic | 30.0% |
| !! | TTTTACAAAGCATCATGACA+TGG | - | chr7_1:62694176-62694195 | Msa1029270:CDS | 30.0% |
| ! | TTTGGAACAATACGAGAATA+AGG | + | chr7_1:62694431-62694450 | None:intergenic | 30.0% |
| AGAAAGAAAAAAGCTCGAAA+AGG | + | chr7_1:62694576-62694595 | None:intergenic | 30.0% | |
| TAACCATGAAGAATAATGGT+TGG | - | chr7_1:62695251-62695270 | Msa1029270:CDS | 30.0% | |
| ATACCAACCATTATTCTTCA+TGG | + | chr7_1:62695257-62695276 | None:intergenic | 30.0% | |
| ! | TAATGGTTGGTATGTATTCA+TGG | - | chr7_1:62695264-62695283 | Msa1029270:CDS | 30.0% |
| ATGATTCACATGAACATGGA+AGG | - | chr7_1:62689596-62689615 | Msa1029270:intron | 35.0% | |
| TGATTCACATGAACATGGAA+GGG | - | chr7_1:62689597-62689616 | Msa1029270:intron | 35.0% | |
| TAGTTTCTCTTTCGAGATTG+AGG | - | chr7_1:62689719-62689738 | Msa1029270:intron | 35.0% | |
| TACCATAAAAGCGAAAGCTA+AGG | - | chr7_1:62689891-62689910 | Msa1029270:intron | 35.0% | |
| !!! | TTTCTGGTTTTTCATTGCCT+AGG | - | chr7_1:62690079-62690098 | Msa1029270:intron | 35.0% |
| !!! | TTCTGGTTTTTCATTGCCTA+GGG | - | chr7_1:62690080-62690099 | Msa1029270:intron | 35.0% |
| ! | GGTTTGGAACAAAACTACTT+TGG | - | chr7_1:62690166-62690185 | Msa1029270:intron | 35.0% |
| TCTAGAAAGACTCTTTCCAT+TGG | + | chr7_1:62690232-62690251 | None:intergenic | 35.0% | |
| ATGGAAAGAGTCTTTCTAGA+AGG | - | chr7_1:62690232-62690251 | Msa1029270:intron | 35.0% | |
| ! | TGGAAAGAGTCTTTCTAGAA+GGG | - | chr7_1:62690233-62690252 | Msa1029270:intron | 35.0% |
| TTTCATCTTATCCTGGAAAG+TGG | + | chr7_1:62690388-62690407 | None:intergenic | 35.0% | |
| CACAGTATCTTGAAGAAACT+TGG | + | chr7_1:62690545-62690564 | None:intergenic | 35.0% | |
| GAGGTTCAGAATTTACAAAG+TGG | - | chr7_1:62690580-62690599 | Msa1029270:intron | 35.0% | |
| ATTTAACGACGAGTTCACTT+TGG | - | chr7_1:62690777-62690796 | Msa1029270:intron | 35.0% | |
| TCACTTTGGATAACATTAGC+AGG | - | chr7_1:62690791-62690810 | Msa1029270:intron | 35.0% | |
| TTTGGATAACATTAGCAGGT+TGG | - | chr7_1:62690795-62690814 | Msa1029270:intron | 35.0% | |
| TGAACCTAACCAATAGTAGA+AGG | + | chr7_1:62690822-62690841 | None:intergenic | 35.0% | |
| CTGTCATGAATCTCATATTC+TGG | - | chr7_1:62690857-62690876 | Msa1029270:CDS | 35.0% | |
| ACATGTTAGCATAACGATCA+TGG | + | chr7_1:62690887-62690906 | None:intergenic | 35.0% | |
| ! | CGTTATGCTAACATGTCTTT+TGG | - | chr7_1:62690891-62690910 | Msa1029270:intron | 35.0% |
| GGTTTCGAAAATGGATAAAC+AGG | - | chr7_1:62690912-62690931 | Msa1029270:intron | 35.0% | |
| TACATAGGTATCATCCCATA+TGG | - | chr7_1:62690959-62690978 | Msa1029270:intron | 35.0% | |
| GTCTCTTATAGGTTAGAGTT+AGG | - | chr7_1:62691095-62691114 | Msa1029270:CDS | 35.0% | |
| AAACCGAAAAGTAAGTGAGA+AGG | + | chr7_1:62691271-62691290 | None:intergenic | 35.0% | |
| ! | TGACTTTGCTATAGTAGCTA+GGG | - | chr7_1:62691407-62691426 | Msa1029270:intron | 35.0% |
| AACTGAATTCTCAGCTCTTA+TGG | - | chr7_1:62691443-62691462 | Msa1029270:CDS | 35.0% | |
| GACAACGATGAAATTATCGA+TGG | + | chr7_1:62691516-62691535 | None:intergenic | 35.0% | |
| TCGATAATTTCATCGTTGTC+TGG | - | chr7_1:62691516-62691535 | Msa1029270:intron | 35.0% | |
| !! | CAATGTGTTACTTTACTAGC+TGG | - | chr7_1:62691758-62691777 | Msa1029270:intron | 35.0% |
| CTGCAAAAAAAGAAGGAAGA+AGG | + | chr7_1:62691837-62691856 | None:intergenic | 35.0% | |
| TTTGAATGCTATTGTGTTGG+TGG | - | chr7_1:62691981-62692000 | Msa1029270:intron | 35.0% | |
| GTTTAAAAGACAGCATCTTG+TGG | - | chr7_1:62692175-62692194 | Msa1029270:intron | 35.0% | |
| CAATTTACAACCCTCAAACA+TGG | + | chr7_1:62692215-62692234 | None:intergenic | 35.0% | |
| TTTCTTTGCAGCTTAATGAC+TGG | - | chr7_1:62692239-62692258 | Msa1029270:CDS | 35.0% | |
| ATACCTAGAGAGAATCAAGA+GGG | + | chr7_1:62692299-62692318 | None:intergenic | 35.0% | |
| GATGACTATGCATTTCAAGA+AGG | + | chr7_1:62692365-62692384 | None:intergenic | 35.0% | |
| !! | GCCTTCTGAAGATTTTGTTT+TGG | - | chr7_1:62692502-62692521 | Msa1029270:intron | 35.0% |
| !!! | CTGAAGATTTTGTTTTGGAG+AGG | - | chr7_1:62692507-62692526 | Msa1029270:intron | 35.0% |
| ! | ATATTTATGTTTTGCGAGGG+AGG | - | chr7_1:62692611-62692630 | Msa1029270:intron | 35.0% |
| GAAATATAGAATGGAAGAGG+GGG | - | chr7_1:62692701-62692720 | Msa1029270:intron | 35.0% | |
| GCAAGATATTTAATAGGAGG+AGG | - | chr7_1:62692917-62692936 | Msa1029270:intron | 35.0% | |
| TGACGAAAGAAATTTGGCTA+CGG | - | chr7_1:62692992-62693011 | Msa1029270:intron | 35.0% | |
| TATCTCTTCTCGTGTTTGTT+CGG | + | chr7_1:62693036-62693055 | None:intergenic | 35.0% | |
| ACAAACACGAGAAGAGATAA+AGG | - | chr7_1:62693037-62693056 | Msa1029270:CDS | 35.0% | |
| ! | TTTTAGCATCAGCATCTGTA+AGG | - | chr7_1:62693114-62693133 | Msa1029270:CDS | 35.0% |
| ! | TTGTCCTATGACTTTTCAGT+CGG | - | chr7_1:62693198-62693217 | Msa1029270:intron | 35.0% |
| ! | AAGAACGTGAAGAGTTTTTG+AGG | - | chr7_1:62693227-62693246 | Msa1029270:intron | 35.0% |
| !! | TTTGAGGCTTGTTAAAAAGG+AGG | - | chr7_1:62693243-62693262 | Msa1029270:intron | 35.0% |
| !! | TGATAAATAGCTTGTTCAGG+AGG | + | chr7_1:62693480-62693499 | None:intergenic | 35.0% |
| !! | GCATGATAAATAGCTTGTTC+AGG | + | chr7_1:62693483-62693502 | None:intergenic | 35.0% |
| GACGATGTTGATGCTAAAAT+TGG | - | chr7_1:62693843-62693862 | Msa1029270:intron | 35.0% | |
| ! | AGGACACCGTGATTTTTATA+AGG | - | chr7_1:62694030-62694049 | Msa1029270:intron | 35.0% |
| TTTATTTGTGACCTGTTCCA+AGG | - | chr7_1:62694085-62694104 | Msa1029270:CDS | 35.0% | |
| ACAAGTTCTTTGAATCTCCT+TGG | + | chr7_1:62694105-62694124 | None:intergenic | 35.0% | |
| ATGTATCTGAAGGACACTTT+AGG | - | chr7_1:62694335-62694354 | Msa1029270:CDS | 35.0% | |
| ! | AAGGACACTTTAGGAAAAGA+AGG | - | chr7_1:62694344-62694363 | Msa1029270:CDS | 35.0% |
| AAAGGTTGCTGATAAGTTCA+TGG | + | chr7_1:62694373-62694392 | None:intergenic | 35.0% | |
| TTAGTTGCATTAATGTGCGA+GGG | + | chr7_1:62694503-62694522 | None:intergenic | 35.0% | |
| ATTAGTTGCATTAATGTGCG+AGG | + | chr7_1:62694504-62694523 | None:intergenic | 35.0% | |
| ! | TCTTTGTTGCACCATCTTTT+AGG | - | chr7_1:62694610-62694629 | Msa1029270:intron | 35.0% |
| ! | AAAACACTTTTCGAACCATG+TGG | - | chr7_1:62694807-62694826 | Msa1029270:CDS | 35.0% |
| AGTTCCAAAAACTTTCCACA+TGG | + | chr7_1:62694825-62694844 | None:intergenic | 35.0% | |
| TTGGAACTAACACAACGATA+TGG | - | chr7_1:62694837-62694856 | Msa1029270:CDS | 35.0% | |
| AACGATATGGCATTACAGTA+TGG | - | chr7_1:62694850-62694869 | Msa1029270:CDS | 35.0% | |
| GCATTACAGTATGGTTTGAT+TGG | - | chr7_1:62694859-62694878 | Msa1029270:CDS | 35.0% | |
| ! | GCATAACAATTAGCCTCTTA+TGG | - | chr7_1:62694890-62694909 | Msa1029270:CDS | 35.0% |
| AACAGATGGGAAAATATTGG+TGG | - | chr7_1:62695096-62695115 | Msa1029270:CDS | 35.0% | |
| GTGGAAGACATTGTCAAATT+GGG | - | chr7_1:62695115-62695134 | Msa1029270:CDS | 35.0% | |
| ! | ATCGGCATCTTCTTTCTTTT+GGG | + | chr7_1:62695143-62695162 | None:intergenic | 35.0% |
| ! | TATCGGCATCTTCTTTCTTT+TGG | + | chr7_1:62695144-62695163 | None:intergenic | 35.0% |
| TCTTCCTACTTCGTCATTAT+CGG | + | chr7_1:62695161-62695180 | None:intergenic | 35.0% | |
| ATCCTTGGATTCTCAAGTGT+TGG | - | chr7_1:62689490-62689509 | Msa1029270:three_prime_UTR | 40.0% | |
| TCCTTGGATTCTCAAGTGTT+GGG | - | chr7_1:62689491-62689510 | Msa1029270:three_prime_UTR | 40.0% | |
| GTGAATTAGATGGCTTGAGT+CGG | - | chr7_1:62689536-62689555 | Msa1029270:CDS | 40.0% | |
| GTAGTTGCGGACAAAGAAAA+GGG | + | chr7_1:62689565-62689584 | None:intergenic | 40.0% | |
| AGTAGTTGCGGACAAAGAAA+AGG | + | chr7_1:62689566-62689585 | None:intergenic | 40.0% | |
| ! | TTTTCTTTGTCCGCAACTAC+TGG | - | chr7_1:62689565-62689584 | Msa1029270:CDS | 40.0% |
| GGACATGATTCACATGAACA+TGG | - | chr7_1:62689592-62689611 | Msa1029270:intron | 40.0% | |
| TTTCTCTTTCGAGATTGAGG+TGG | - | chr7_1:62689722-62689741 | Msa1029270:intron | 40.0% | |
| GGAAATGAAACGGACACTTT+GGG | + | chr7_1:62689752-62689771 | None:intergenic | 40.0% | |
| AGGAAATGAAACGGACACTT+TGG | + | chr7_1:62689753-62689772 | None:intergenic | 40.0% | |
| AAGTGTCCGTTTCATTTCCT+CGG | - | chr7_1:62689753-62689772 | Msa1029270:intron | 40.0% | |
| !! | AGCCTTAGCTTTCGCTTTTA+TGG | + | chr7_1:62689896-62689915 | None:intergenic | 40.0% |
| ! | TGGGCTATGATTCTAGGAAT+TGG | - | chr7_1:62689967-62689986 | Msa1029270:intron | 40.0% |
| TGCTCATCGACAAAATAGCT+CGG | + | chr7_1:62690002-62690021 | None:intergenic | 40.0% | |
| ! | ATACGTGTGTCAGACTTTTC+TGG | - | chr7_1:62690063-62690082 | Msa1029270:intron | 40.0% |
| TTTCATTGCCTAGGGATGAT+TGG | - | chr7_1:62690088-62690107 | Msa1029270:intron | 40.0% | |
| TTCATTGCCTAGGGATGATT+GGG | - | chr7_1:62690089-62690108 | Msa1029270:intron | 40.0% | |
| GGGCAAAGAAGTTAAGTCAT+TGG | - | chr7_1:62690109-62690128 | Msa1029270:intron | 40.0% | |
| AATCCACTCTGCAACACTAT+TGG | - | chr7_1:62690145-62690164 | Msa1029270:intron | 40.0% | |
| AAACCAATAGTGTTGCAGAG+TGG | + | chr7_1:62690151-62690170 | None:intergenic | 40.0% | |
| ! | ACTCTGCAACACTATTGGTT+TGG | - | chr7_1:62690150-62690169 | Msa1029270:intron | 40.0% |
| AACTACTTTGGGCTGATGTT+AGG | - | chr7_1:62690178-62690197 | Msa1029270:intron | 40.0% | |
| ! | GGACAACAGTCGATATTTTC+AGG | - | chr7_1:62690274-62690293 | Msa1029270:intron | 40.0% |
| GGCAATAGAATCTCCATGAA+TGG | + | chr7_1:62690330-62690349 | None:intergenic | 40.0% | |
| GGAAAGAGTTTCAGGAATAC+TGG | + | chr7_1:62690351-62690370 | None:intergenic | 40.0% | |
| ATCTTATCCTGGAAAGTGGA+AGG | + | chr7_1:62690384-62690403 | None:intergenic | 40.0% | |
| CCTGTTCTTTCATCTTATCC+TGG | + | chr7_1:62690395-62690414 | None:intergenic | 40.0% | |
| CCAGGATAAGATGAAAGAAC+AGG | - | chr7_1:62690392-62690411 | Msa1029270:CDS | 40.0% | |
| ! | AATAAAAGCACGCCGTAGAT+AGG | + | chr7_1:62690450-62690469 | None:intergenic | 40.0% |
| !! | TTTGGGAAGGCTTAACTTGT+AGG | - | chr7_1:62690480-62690499 | Msa1029270:intron | 40.0% |
| !! | TGTAGGAGGCATTGAAAAGA+AGG | - | chr7_1:62690497-62690516 | Msa1029270:intron | 40.0% |
| TACTGTGAAAGAAATGGCGA+AGG | - | chr7_1:62690558-62690577 | Msa1029270:intron | 40.0% | |
| ACAAAGTGGAGAAATGAAGC+AGG | - | chr7_1:62690594-62690613 | Msa1029270:intron | 40.0% | |
| TTAATGGAACAGGTCAGAAC+AGG | - | chr7_1:62690712-62690731 | Msa1029270:intron | 40.0% | |
| ! | TGGTCCTTCTACTATTGGTT+AGG | - | chr7_1:62690815-62690834 | Msa1029270:intron | 40.0% |
| TTACACATGTTTACCAAGCG+AGG | + | chr7_1:62690938-62690957 | None:intergenic | 40.0% | |
| ATGCACGTTATGCCAATGTA+TGG | - | chr7_1:62691238-62691257 | Msa1029270:intron | 40.0% | |
| !! | CTGCCTTCTCACTTACTTTT+CGG | - | chr7_1:62691265-62691284 | Msa1029270:intron | 40.0% |
| ! | GTGACTTTGCTATAGTAGCT+AGG | - | chr7_1:62691406-62691425 | Msa1029270:intron | 40.0% |
| ! | GACTTTGCTATAGTAGCTAG+GGG | - | chr7_1:62691408-62691427 | Msa1029270:intron | 40.0% |
| ! | ACTTTGCTATAGTAGCTAGG+GGG | - | chr7_1:62691409-62691428 | Msa1029270:intron | 40.0% |
| CTCAAAGTAGCAATTACGAG+AGG | + | chr7_1:62691875-62691894 | None:intergenic | 40.0% | |
| GAAATTGGTAGAGAAGGAAG+TGG | - | chr7_1:62692105-62692124 | Msa1029270:intron | 40.0% | |
| AAAAGACAGCATCTTGTGGT+TGG | - | chr7_1:62692179-62692198 | Msa1029270:intron | 40.0% | |
| ACTGTTAGTCCCATGTTTGA+GGG | - | chr7_1:62692202-62692221 | Msa1029270:CDS | 40.0% | |
| GATACCTAGAGAGAATCAAG+AGG | + | chr7_1:62692300-62692319 | None:intergenic | 40.0% | |
| ATGAGGTTGTGGATACTGTT+GGG | - | chr7_1:62692468-62692487 | Msa1029270:intron | 40.0% | |
| TTTGGAGAGGAAGAGAAAGT+TGG | - | chr7_1:62692520-62692539 | Msa1029270:intron | 40.0% | |
| AATGCAGGAAGAGCTAATCA+AGG | - | chr7_1:62692553-62692572 | Msa1029270:intron | 40.0% | |
| AAATTTGGCTACGGAAGAGA+TGG | - | chr7_1:62693001-62693020 | Msa1029270:intron | 40.0% | |
| ACGAGAAGAGATAAAGGCAA+AGG | - | chr7_1:62693043-62693062 | Msa1029270:CDS | 40.0% | |
| ATGCTAAAACAGCCAATGCT+TGG | + | chr7_1:62693103-62693122 | None:intergenic | 40.0% | |
| TGTAGAATTGATCCGTCTCT+AGG | - | chr7_1:62693275-62693294 | Msa1029270:intron | 40.0% | |
| GTAGAATTGATCCGTCTCTA+GGG | - | chr7_1:62693276-62693295 | Msa1029270:intron | 40.0% | |
| ATTCACTACATCCCTAGAGA+CGG | + | chr7_1:62693290-62693309 | None:intergenic | 40.0% | |
| GGGATGTAGTGAATACGTTA+CGG | - | chr7_1:62693296-62693315 | Msa1029270:intron | 40.0% | |
| ! | TTCTTCAGCACTTGTTGACA+AGG | - | chr7_1:62693675-62693694 | Msa1029270:intron | 40.0% |
| ATGCTAAAATTGGAGATCGC+TGG | - | chr7_1:62693853-62693872 | Msa1029270:intron | 40.0% | |
| !! | GAAGTTGGCTAACTGCTTTT+TGG | + | chr7_1:62693992-62694011 | None:intergenic | 40.0% |
| AAGCAGTTAGCCAACTTCAA+TGG | - | chr7_1:62693994-62694013 | Msa1029270:intron | 40.0% | |
| ATGGATTCTGCCATTGAAGT+TGG | + | chr7_1:62694007-62694026 | None:intergenic | 40.0% | |
| TCAATGGCAGAATCCATTGA+AGG | - | chr7_1:62694010-62694029 | Msa1029270:intron | 40.0% | |
| AAAATCACGGTGTCCTTCAA+TGG | + | chr7_1:62694026-62694045 | None:intergenic | 40.0% | |
| TCTTTGAATCTCCTTGGAAC+AGG | + | chr7_1:62694099-62694118 | None:intergenic | 40.0% | |
| TCAAATGTTTGGCCATGTTC+TGG | - | chr7_1:62694263-62694282 | Msa1029270:intron | 40.0% | |
| ACTTATCAGCAACCTTTCGA+AGG | - | chr7_1:62694376-62694395 | Msa1029270:CDS | 40.0% | |
| ACTAACCACTATCCTTCGAA+AGG | + | chr7_1:62694391-62694410 | None:intergenic | 40.0% | |
| TTGCTCTCTAAATCCTCTCA+GGG | + | chr7_1:62694658-62694677 | None:intergenic | 40.0% | |
| ! | CGAACCATGTGGAAAGTTTT+TGG | - | chr7_1:62694818-62694837 | Msa1029270:CDS | 40.0% |
| TATCGTTCTACGTTGTACGT+TGG | - | chr7_1:62694970-62694989 | Msa1029270:CDS | 40.0% | |
| GGTGGAAGACATTGTCAAAT+TGG | - | chr7_1:62695114-62695133 | Msa1029270:CDS | 40.0% | |
| CAACATACTCGCGTTATCCT+TGG | - | chr7_1:62689475-62689494 | Msa1029270:three_prime_UTR | 45.0% | |
| TCCCAACACTTGAGAATCCA+AGG | + | chr7_1:62689495-62689514 | None:intergenic | 45.0% | |
| ATGTCCATGTCCAGTAGTTG+CGG | + | chr7_1:62689578-62689597 | None:intergenic | 45.0% | |
| CAGAAGCCGAGGAAATGAAA+CGG | + | chr7_1:62689762-62689781 | None:intergenic | 45.0% | |
| AGATTGATTAGCAGAAGCCG+AGG | + | chr7_1:62689773-62689792 | None:intergenic | 45.0% | |
| GACAAAATAGCTCGGAAAGC+TGG | + | chr7_1:62689994-62690013 | None:intergenic | 45.0% | |
| !! | GAGCTATTTTGTCGATGAGC+AGG | - | chr7_1:62690001-62690020 | Msa1029270:intron | 45.0% |
| TTCTTTGCCCAATCATCCCT+AGG | + | chr7_1:62690099-62690118 | None:intergenic | 45.0% | |
| ! | AGAGTCTTTCTAGAAGGGAG+AGG | - | chr7_1:62690238-62690257 | Msa1029270:intron | 45.0% |
| GCATGTTGGGAAAGAGTTTC+AGG | + | chr7_1:62690359-62690378 | None:intergenic | 45.0% | |
| AAAGTGGAAGGCAGCATGTT+GGG | + | chr7_1:62690372-62690391 | None:intergenic | 45.0% | |
| TGTGAAAGAAATGGCGAAGG+AGG | - | chr7_1:62690561-62690580 | Msa1029270:intron | 45.0% | |
| AAGTGGAGAAATGAAGCAGG+CGG | - | chr7_1:62690597-62690616 | Msa1029270:intron | 45.0% | |
| !! | CAGGTTGGTCCTTCTACTAT+TGG | - | chr7_1:62690810-62690829 | Msa1029270:intron | 45.0% |
| GAAGGCAGACATCCATACAT+TGG | + | chr7_1:62691253-62691272 | None:intergenic | 45.0% | |
| TGCGCCCACAACAATAACAT+TGG | + | chr7_1:62691474-62691493 | None:intergenic | 45.0% | |
| TTATTGTTGTGGGCGCAAGT+TGG | - | chr7_1:62691477-62691496 | Msa1029270:intron | 45.0% | |
| ! | ACTGATTCAAGAAGAAGGCG+TGG | - | chr7_1:62691590-62691609 | Msa1029270:CDS | 45.0% |
| ATCCTCTGTCTCTACAAGCT+TGG | + | chr7_1:62691641-62691660 | None:intergenic | 45.0% | |
| TGTAGAGACAGAGGATTGCT+TGG | - | chr7_1:62691645-62691664 | Msa1029270:CDS | 45.0% | |
| ATTGCTTGGATTGCGTTCAG+TGG | - | chr7_1:62691659-62691678 | Msa1029270:CDS | 45.0% | |
| TGCGTTCAGTGGAAGAAATG+CGG | - | chr7_1:62691670-62691689 | Msa1029270:CDS | 45.0% | |
| GAACGAGAAACTGGCCATAA+TGG | - | chr7_1:62691792-62691811 | Msa1029270:intron | 45.0% | |
| GACTGTTAGTCCCATGTTTG+AGG | - | chr7_1:62692201-62692220 | Msa1029270:CDS | 45.0% | |
| TTTGCAGCTTAATGACTGGC+TGG | - | chr7_1:62692243-62692262 | Msa1029270:CDS | 45.0% | |
| AGAGGGAAGACGACAAAGAA+TGG | + | chr7_1:62692282-62692301 | None:intergenic | 45.0% | |
| CTTCCCTCTTGATTCTCTCT+AGG | - | chr7_1:62692293-62692312 | Msa1029270:intron | 45.0% | |
| ! | AGCATTTTCCGTCACAGGAA+AGG | - | chr7_1:62692400-62692419 | Msa1029270:CDS | 45.0% |
| TGGTTTGACCTTTCCTGTGA+CGG | + | chr7_1:62692411-62692430 | None:intergenic | 45.0% | |
| ACTCTCTTCTTTGCCAGATG+AGG | - | chr7_1:62692451-62692470 | Msa1029270:intron | 45.0% | |
| TTCTTTGCCAGATGAGGTTG+TGG | - | chr7_1:62692457-62692476 | Msa1029270:intron | 45.0% | |
| ACAGTATCCACAACCTCATC+TGG | + | chr7_1:62692467-62692486 | None:intergenic | 45.0% | |
| GATGAGGTTGTGGATACTGT+TGG | - | chr7_1:62692467-62692486 | Msa1029270:intron | 45.0% | |
| TGAGGTTGTGGATACTGTTG+GGG | - | chr7_1:62692469-62692488 | Msa1029270:intron | 45.0% | |
| GGAGGAAGAGAAAGAGAAAG+AGG | - | chr7_1:62692935-62692954 | Msa1029270:intron | 45.0% | |
| AGAGAAAGAGGAAGAGAAGC+AGG | - | chr7_1:62692947-62692966 | Msa1029270:intron | 45.0% | |
| TTGCAAGATCAGCCAAGCAT+TGG | - | chr7_1:62693088-62693107 | Msa1029270:CDS | 45.0% | |
| ! | CTCACCGACTGAAAAGTCAT+AGG | + | chr7_1:62693205-62693224 | None:intergenic | 45.0% |
| !! | ATAGGCAAAGAAGGTGCTGA+AGG | - | chr7_1:62693571-62693590 | Msa1029270:intron | 45.0% |
| AGAAGGCTTATAGAGCTGCA+AGG | - | chr7_1:62693608-62693627 | Msa1029270:intron | 45.0% | |
| ! | GAAGGATAGTGATGGTGCTT+TGG | - | chr7_1:62693630-62693649 | Msa1029270:intron | 45.0% |
| GGAAGTCGCTATTAGTGACA+AGG | - | chr7_1:62693651-62693670 | Msa1029270:intron | 45.0% | |
| CTAAAATTGGAGATCGCTGG+CGG | - | chr7_1:62693856-62693875 | Msa1029270:intron | 45.0% | |
| ATCCGCTGCTATGTATCTGA+AGG | - | chr7_1:62694325-62694344 | Msa1029270:CDS | 45.0% | |
| GTCCTTCAGATACATAGCAG+CGG | + | chr7_1:62694330-62694349 | None:intergenic | 45.0% | |
| AGCAACCTTTCGAAGGATAG+TGG | - | chr7_1:62694383-62694402 | Msa1029270:CDS | 45.0% | |
| CAAAAACCTAATGCAGCACG+AGG | - | chr7_1:62694546-62694565 | Msa1029270:CDS | 45.0% | |
| CAGACATGGCTCCTAAAAGA+TGG | + | chr7_1:62694624-62694643 | None:intergenic | 45.0% | |
| TGCTCTCTAAATCCTCTCAG+GGG | + | chr7_1:62694657-62694676 | None:intergenic | 45.0% | |
| CTTGCTCTCTAAATCCTCTC+AGG | + | chr7_1:62694659-62694678 | None:intergenic | 45.0% | |
| GATGCCGATAATGACGAAGT+AGG | - | chr7_1:62695154-62695173 | Msa1029270:CDS | 45.0% | |
| !!! | TTTTTATATTATTATGTTAA+TGG | - | chr7_1:62690696-62690715 | Msa1029270:intron | 5.0% |
| TTGTCCGCAACTACTGGACA+TGG | - | chr7_1:62689571-62689590 | Msa1029270:CDS | 50.0% | |
| TCTAGATTGGGTAGCAGCAG+TGG | - | chr7_1:62689790-62689809 | Msa1029270:intron | 50.0% | |
| ACAGAAGAAGGAAGCTTCGC+CGG | - | chr7_1:62689837-62689856 | Msa1029270:intron | 50.0% | |
| GAAAGTGGAAGGCAGCATGT+TGG | + | chr7_1:62690373-62690392 | None:intergenic | 50.0% | |
| !! | GGGAAGGCTTAACTTGTAGG+AGG | - | chr7_1:62690483-62690502 | Msa1029270:intron | 50.0% |
| ATGGATAAACAGGCCTCGCT+TGG | - | chr7_1:62690922-62690941 | Msa1029270:intron | 50.0% | |
| AGTGGAAGAAATGCGGCAAC+AGG | - | chr7_1:62691677-62691696 | Msa1029270:CDS | 50.0% | |
| !! | TGCAGAGCATTTTCCGTCAC+AGG | - | chr7_1:62692395-62692414 | Msa1029270:CDS | 50.0% |
| CACAGGAAAGGTCAAACCAG+AGG | - | chr7_1:62692412-62692431 | Msa1029270:CDS | 50.0% | |
| AGGAAAGGTCAAACCAGAGG+AGG | - | chr7_1:62692415-62692434 | Msa1029270:CDS | 50.0% | |
| TCTCGTGTTTGTTCGGTCGT+TGG | + | chr7_1:62693029-62693048 | None:intergenic | 50.0% | |
| CTAACCTACCACTGTGCAGA+TGG | - | chr7_1:62693531-62693550 | Msa1029270:intron | 50.0% | |
| ATACAGCTCCATCTGCACAG+TGG | + | chr7_1:62693542-62693561 | None:intergenic | 50.0% | |
| GGCTTATAGAGCTGCAAGGA+AGG | - | chr7_1:62693612-62693631 | Msa1029270:intron | 50.0% | |
| GCTGCAAGGAAGGATAGTGA+TGG | - | chr7_1:62693622-62693641 | Msa1029270:intron | 50.0% | |
| ATGTTTGGCCATGTTCTGGC+AGG | - | chr7_1:62694267-62694286 | Msa1029270:intron | 50.0% | |
| TGTTTGGCCATGTTCTGGCA+GGG | - | chr7_1:62694268-62694287 | Msa1029270:intron | 50.0% | |
| TCATAGTCCCTGCCAGAACA+TGG | + | chr7_1:62694278-62694297 | None:intergenic | 50.0% | |
| TGTTCTGGCAGGGACTATGA+TGG | - | chr7_1:62694278-62694297 | Msa1029270:intron | 50.0% | |
| GTTCTGGCAGGGACTATGAT+GGG | - | chr7_1:62694279-62694298 | Msa1029270:intron | 50.0% | |
| TGATGGGAAAGTGACACCTG+AGG | - | chr7_1:62694295-62694314 | Msa1029270:CDS | 50.0% | |
| GGAAAACCTCGTGCTGCATT+AGG | + | chr7_1:62694555-62694574 | None:intergenic | 50.0% | |
| AGATTGGGTAGCAGCAGTGG+TGG | - | chr7_1:62689793-62689812 | Msa1029270:intron | 55.0% | |
| ! | GGTAGCAGCAGTGGTGGAAA+TGG | - | chr7_1:62689799-62689818 | Msa1029270:intron | 55.0% |
| ACAGCCTCATCACACTCCTC+CGG | + | chr7_1:62689859-62689878 | None:intergenic | 55.0% | |
| CATGCTGCCTTCCACTTTCC+AGG | - | chr7_1:62690374-62690393 | Msa1029270:CDS | 55.0% | |
| TCACATCATCACGACTCGCG+AGG | + | chr7_1:62691390-62691409 | None:intergenic | 55.0% | |
| CGCCAAGCTTGTAGAGACAG+AGG | - | chr7_1:62691636-62691655 | Msa1029270:CDS | 55.0% | |
| GTAGCTTGAACAGCCTCCTC+TGG | + | chr7_1:62692431-62692450 | None:intergenic | 55.0% | |
| ! | TTTGCGAGGGAGGCATGAGT+TGG | - | chr7_1:62692621-62692640 | Msa1029270:intron | 55.0% |
| AGCTCCATCTGCACAGTGGT+AGG | + | chr7_1:62693538-62693557 | None:intergenic | 55.0% | |
| !! | AGAAGGTGCTGAAGGTGAGC+AGG | - | chr7_1:62693579-62693598 | Msa1029270:intron | 55.0% |
| AGGTGAGCAGGAAGCTGAGA+AGG | - | chr7_1:62693591-62693610 | Msa1029270:intron | 55.0% | |
| GCAGCGGATACAAACTCCTC+AGG | + | chr7_1:62694314-62694333 | None:intergenic | 55.0% | |
| GGGGTCATTGCTCACAGACA+TGG | + | chr7_1:62694638-62694657 | None:intergenic | 55.0% | |
| TGTGAGCAATGACCCCTGAG+AGG | - | chr7_1:62694642-62694661 | Msa1029270:intron | 55.0% | |
| GAAGAAGGAAGCTTCGCCGG+AGG | - | chr7_1:62689840-62689859 | Msa1029270:intron | 60.0% | |
| ! | TTCGCCGGAGGAGTGTGATG+AGG | - | chr7_1:62689852-62689871 | Msa1029270:intron | 60.0% |
| ATCGCTGGCGGTTGCTAGAC+AGG | - | chr7_1:62693868-62693887 | Msa1029270:intron | 60.0% | |
| GGGAGAGGCAGCAACTCACG+AGG | - | chr7_1:62690253-62690272 | Msa1029270:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 62689415 | 62695291 | 62689415 | ID=Msa1029270;Name=Msa1029270 |
| chr7_1 | mRNA | 62689415 | 62695291 | 62689415 | ID=Msa1029270-mRNA-1;Parent=Msa1029270;Name=Msa1029270-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.84|0.64|1|1|1|14|105|745 |
| chr7_1 | exon | 62689415 | 62689605 | 62689415 | ID=Msa1029270-mRNA-1:exon:13503;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62690302 | 62690417 | 62690302 | ID=Msa1029270-mRNA-1:exon:13502;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62690817 | 62690899 | 62690817 | ID=Msa1029270-mRNA-1:exon:13501;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62691010 | 62691156 | 62691010 | ID=Msa1029270-mRNA-1:exon:13500;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62691442 | 62691489 | 62691442 | ID=Msa1029270-mRNA-1:exon:13499;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62691576 | 62691773 | 62691576 | ID=Msa1029270-mRNA-1:exon:13498;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62692189 | 62692306 | 62692189 | ID=Msa1029270-mRNA-1:exon:13497;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62692392 | 62692456 | 62692392 | ID=Msa1029270-mRNA-1:exon:13496;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62693008 | 62693134 | 62693008 | ID=Msa1029270-mRNA-1:exon:13495;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62693680 | 62693772 | 62693680 | ID=Msa1029270-mRNA-1:exon:13494;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62693894 | 62693982 | 62693894 | ID=Msa1029270-mRNA-1:exon:13493;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62694058 | 62694204 | 62694058 | ID=Msa1029270-mRNA-1:exon:13492;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62694293 | 62694605 | 62694293 | ID=Msa1029270-mRNA-1:exon:13491;Parent=Msa1029270-mRNA-1 |
| chr7_1 | exon | 62694684 | 62695291 | 62694684 | ID=Msa1029270-mRNA-1:exon:13490;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62694684 | 62695291 | 62694684 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62694293 | 62694605 | 62694293 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62694058 | 62694204 | 62694058 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62693894 | 62693982 | 62693894 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62693680 | 62693772 | 62693680 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62693008 | 62693134 | 62693008 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62692392 | 62692456 | 62692392 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62692189 | 62692306 | 62692189 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62691576 | 62691773 | 62691576 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62691442 | 62691489 | 62691442 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62691010 | 62691156 | 62691010 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62690817 | 62690899 | 62690817 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62690302 | 62690417 | 62690302 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | CDS | 62689520 | 62689605 | 62689520 | ID=Msa1029270-mRNA-1:cds;Parent=Msa1029270-mRNA-1 |
| chr7_1 | three_prime_UTR | 62689415 | 62689519 | 62689415 | ID=Msa1029270-mRNA-1:three_prime_utr;Parent=Msa1029270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
