Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121590 | XP_003624216.1 | 96.580 | 848 | 27 | 1 | 1 | 846 | 1 | 848 | 0.0 | 1664 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121590 | sp|Q9SXY0|FAS1_ARATH | 48.348 | 817 | 371 | 17 | 28 | 828 | 21 | 802 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121590 | G7KSE5 | 96.580 | 848 | 27 | 1 | 1 | 846 | 1 | 848 | 0.0 | 1664 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1068100 | Msa1121590 | 0.815842 | 7.513568e-52 | -8.615850e-47 |
| Msa1121590 | Msa1364430 | 0.820548 | 6.473263e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121590 | MtrunA17_Chr7g0249641 | 96.462 | 848 | 27 | 2 | 1 | 846 | 1 | 847 | 0.0 | 1657 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121590 | AT1G65470.2 | 47.847 | 813 | 373 | 15 | 28 | 828 | 21 | 794 | 0.0 | 646 |
| Msa1121590 | AT1G65470.1 | 48.348 | 817 | 371 | 17 | 28 | 828 | 21 | 802 | 0.0 | 644 |
Find 194 sgRNAs with CRISPR-Local
Find 462 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGCTGATGCTGATATTT+TGG | 0.163103 | 7_3:+71685568 | Msa1121590:CDS |
| CCCTAATCGGCGGTGGAATA+AGG | 0.168783 | 7_3:-71685074 | None:intergenic |
| GCAGGTCACACTTTCATTTA+TGG | 0.201384 | 7_3:+71688576 | Msa1121590:intron |
| ACGCTTGGATCCTTCCTTAA+TGG | 0.205884 | 7_3:-71689198 | None:intergenic |
| TGCTTATTACAGAGGGGTTT+TGG | 0.220658 | 7_3:+71685316 | Msa1121590:CDS |
| AAGGGAAATGAAAATGAAAA+TGG | 0.228638 | 7_3:-71685055 | None:intergenic |
| GAAGTTGAACATTTGGAATT+TGG | 0.231141 | 7_3:+71684944 | None:intergenic |
| TTATGCCCTGAGAACAATTC+TGG | 0.236427 | 7_3:-71690687 | None:intergenic |
| CCTTATTCCACCGCCGATTA+GGG | 0.248794 | 7_3:+71685074 | Msa1121590:five_prime_UTR |
| ACAAAAGCAAGTCTCAATTA+TGG | 0.251427 | 7_3:+71687838 | Msa1121590:CDS |
| ATCATTCTGATTCATGTCTT+TGG | 0.254230 | 7_3:+71685594 | Msa1121590:CDS |
| CCCTTATTCCACCGCCGATT+AGG | 0.259380 | 7_3:+71685073 | Msa1121590:five_prime_UTR |
| TAAAGTGAACTGAAAATATT+TGG | 0.266077 | 7_3:-71685002 | None:intergenic |
| CCTTCCTCGATAGTACTTCT+TGG | 0.289125 | 7_3:-71688816 | None:intergenic |
| AAATCAGAACTTACAATTAT+AGG | 0.292508 | 7_3:-71690516 | None:intergenic |
| TTGTTTGCAGTTCACATTGT+AGG | 0.313048 | 7_3:-71687028 | None:intergenic |
| TTGGAGGACGTCATCCATTA+AGG | 0.314346 | 7_3:+71689184 | Msa1121590:CDS |
| AGCTCTCCTCGAACAGATTT+CGG | 0.317637 | 7_3:-71685868 | None:intergenic |
| CAGTAGAGGGAGAGGCTTCT+TGG | 0.317818 | 7_3:-71690437 | None:intergenic |
| TTTCATTTATGGCGCTCTTT+AGG | 0.324079 | 7_3:+71688587 | Msa1121590:CDS |
| AAGAGTAGTGTGTTGTTTGC+TGG | 0.327622 | 7_3:+71685521 | Msa1121590:CDS |
| CGTGGTGGTTGCGGCGTTGA+TGG | 0.333252 | 7_3:+71685385 | Msa1121590:CDS |
| AATGTAAGAAGTTGAACATT+TGG | 0.342203 | 7_3:+71684937 | None:intergenic |
| CAGGGCATAAATAAAGTGTT+AGG | 0.352933 | 7_3:+71690700 | Msa1121590:CDS |
| TTGTTATTCGACGCACTTGT+CGG | 0.356057 | 7_3:+71685890 | Msa1121590:CDS |
| GGGGATTGTGTTGGCGGAAG+GGG | 0.357109 | 7_3:+71685481 | Msa1121590:CDS |
| CTGATTCATGTCTTTGGTGT+TGG | 0.362682 | 7_3:+71685600 | Msa1121590:CDS |
| TCGCTCTGAACAGAGGGATT+AGG | 0.366654 | 7_3:-71687884 | None:intergenic |
| TCGAACCTCCGCATTGCTTA+AGG | 0.367255 | 7_3:-71685358 | None:intergenic |
| GGTGGCGGTGGTTGTGGTGG+AGG | 0.370622 | 7_3:-71685164 | None:intergenic |
| ATTTGCGCTTGTTTCTCTTC+GGG | 0.373163 | 7_3:-71685260 | None:intergenic |
| AGGGAAATGAAAATGAAAAT+GGG | 0.375342 | 7_3:-71685054 | None:intergenic |
| ATCTGCTGTCTTGTGGATCA+TGG | 0.376938 | 7_3:-71691541 | None:intergenic |
| TGAGGTGGTGGCGGTGGTTG+TGG | 0.381810 | 7_3:-71685170 | None:intergenic |
| TGCTACTCCACTGCCTGATC+TGG | 0.383379 | 7_3:+71690470 | Msa1121590:CDS |
| CCTAATCGGCGGTGGAATAA+GGG | 0.385397 | 7_3:-71685073 | None:intergenic |
| TGATTCATGTCTTTGGTGTT+GGG | 0.389779 | 7_3:+71685601 | Msa1121590:CDS |
| TTGTTAAAAGCTTCAGTCTT+GGG | 0.390193 | 7_3:-71688659 | None:intergenic |
| GTTGTGGTGGAGGAGTGGTT+TGG | 0.391596 | 7_3:-71685154 | None:intergenic |
| TTATTGGATCGCAGTATTAA+CGG | 0.392096 | 7_3:+71690306 | Msa1121590:CDS |
| GACAGGATCATGGCTGTATC+TGG | 0.395958 | 7_3:+71685925 | Msa1121590:CDS |
| GATTTGCGCTTGTTTCTCTT+CGG | 0.401076 | 7_3:-71685261 | None:intergenic |
| AACTGAAAATATTTGGTGTT+TGG | 0.401856 | 7_3:-71684995 | None:intergenic |
| TAGAGATGGTGGTTGCGCTT+GGG | 0.406186 | 7_3:+71691636 | Msa1121590:three_prime_UTR |
| TTGAGAATGTACACAATTCC+TGG | 0.417447 | 7_3:+71690363 | Msa1121590:CDS |
| ACAAAATTTGCTATGATCAC+AGG | 0.425291 | 7_3:-71690264 | None:intergenic |
| GGGTTGGATTTGAGACGATT+TGG | 0.426833 | 7_3:-71685203 | None:intergenic |
| CACTATCCAGAATTGTTCTC+AGG | 0.429969 | 7_3:+71690681 | Msa1121590:CDS |
| TCTGGTATGGCAGCCAGATC+AGG | 0.431989 | 7_3:-71690483 | None:intergenic |
| TGTATTTATAGTCATGTTGT+TGG | 0.432134 | 7_3:+71689165 | Msa1121590:intron |
| TCATGTGATCTGCTGTCTTG+TGG | 0.436670 | 7_3:-71691548 | None:intergenic |
| GAAAAGGATGCAGACCGATT+AGG | 0.439137 | 7_3:+71688734 | Msa1121590:CDS |
| GGAAGGGGTTAATTCAGCTT+TGG | 0.440309 | 7_3:+71685496 | Msa1121590:CDS |
| GGTTTCCCGCTTTCACCTCC+AGG | 0.441704 | 7_3:-71691473 | None:intergenic |
| TTCGAGAAACGTGGTGGTTG+CGG | 0.445489 | 7_3:+71685376 | Msa1121590:CDS |
| CTGGACTACTTTCTCCTAAT+CGG | 0.457878 | 7_3:-71688748 | None:intergenic |
| AAAATTGCTAATTAAACAGT+TGG | 0.458316 | 7_3:+71686950 | Msa1121590:CDS |
| GACATTCGCATGATAGTTGA+AGG | 0.459315 | 7_3:+71686782 | Msa1121590:CDS |
| TTAGAGATGGTGGTTGCGCT+TGG | 0.463051 | 7_3:+71691635 | Msa1121590:three_prime_UTR |
| AAACCATAAAAGGCTGGTCT+AGG | 0.464102 | 7_3:-71688863 | None:intergenic |
| AAGCACATCTGCTCCTGCTT+AGG | 0.464936 | 7_3:-71690333 | None:intergenic |
| TATGTCAGCTACTCTTTCAA+TGG | 0.465368 | 7_3:+71687967 | Msa1121590:CDS |
| ACTTACTTGCGAAGATCCTC+AGG | 0.466613 | 7_3:-71688022 | None:intergenic |
| GGTGGTGGCGGTGGTTGTGG+TGG | 0.466786 | 7_3:-71685167 | None:intergenic |
| GCAATTCATGAGGATGAGTT+AGG | 0.467673 | 7_3:+71688707 | Msa1121590:CDS |
| TTTGTTAAAAGCTTCAGTCT+TGG | 0.468049 | 7_3:-71688660 | None:intergenic |
| CAAAATATCAGCATCAGCAT+TGG | 0.468700 | 7_3:-71685567 | None:intergenic |
| GGCTGTGGTGATGTTTCACC+AGG | 0.469636 | 7_3:-71691494 | None:intergenic |
| CAAGAAGCCTCTCCCTCTAC+TGG | 0.472444 | 7_3:+71690438 | Msa1121590:CDS |
| TGGTGGAGGAGTGGTTTGGA+CGG | 0.475446 | 7_3:-71685150 | None:intergenic |
| CGGTGGTTGTGGTGGAGGAG+TGG | 0.476087 | 7_3:-71685159 | None:intergenic |
| GGATCTTGAGGTGGTGGCGG+TGG | 0.478008 | 7_3:-71685176 | None:intergenic |
| AGAGTAGTGTGTTGTTTGCT+GGG | 0.478774 | 7_3:+71685522 | Msa1121590:CDS |
| GATGGATTCTTTGTACCAGA+TGG | 0.480905 | 7_3:+71689442 | Msa1121590:CDS |
| AAAATATCAGCATCAGCATT+GGG | 0.483686 | 7_3:-71685566 | None:intergenic |
| GAACATTTGGAATTTGGAAG+TGG | 0.485632 | 7_3:+71684950 | Msa1121590:five_prime_UTR |
| TGAATTGTGAAGTGGCGAAT+GGG | 0.486970 | 7_3:+71685459 | Msa1121590:CDS |
| TCTGATGGAGAAAGTGAAGA+TGG | 0.487964 | 7_3:+71689424 | Msa1121590:CDS |
| ACCTTTGCCAGTAGAGGGAG+AGG | 0.488734 | 7_3:-71690445 | None:intergenic |
| GGCCAACATCTGTTTCCATT+CGG | 0.492543 | 7_3:-71690119 | None:intergenic |
| CTCAAACAGAAAACAGAGAT+GGG | 0.493093 | 7_3:+71688622 | Msa1121590:CDS |
| AAAGAAGTATTGGCTAAGCT+TGG | 0.496391 | 7_3:+71691285 | Msa1121590:CDS |
| GCTGGATCTTGAGGTGGTGG+CGG | 0.497358 | 7_3:-71685179 | None:intergenic |
| ATTGAGCATGAATTACCATC+TGG | 0.498051 | 7_3:-71688767 | None:intergenic |
| TCAGGTGAAGAAAGAAGTAT+TGG | 0.500122 | 7_3:+71691275 | Msa1121590:intron |
| TGGGGATATGTACCAATGTA+AGG | 0.500227 | 7_3:+71691655 | Msa1121590:three_prime_UTR |
| TGTCAGCAGCGATGAGGAAT+GGG | 0.505324 | 7_3:+71689230 | Msa1121590:CDS |
| CATTTGGAATTTGGAAGTGG+AGG | 0.505539 | 7_3:+71684953 | Msa1121590:five_prime_UTR |
| GTGTGTTGTTTGCTGGGCAG+AGG | 0.507517 | 7_3:+71685528 | Msa1121590:CDS |
| TCTAAAAGGTGCTTACCACC+TGG | 0.510069 | 7_3:+71691455 | Msa1121590:CDS |
| GATTTGAGACGATTTGGTGC+TGG | 0.512802 | 7_3:-71685197 | None:intergenic |
| TTGTCAGCAGCGATGAGGAA+TGG | 0.512945 | 7_3:+71689229 | Msa1121590:CDS |
| AGCAGCACCTTTGCCAGTAG+AGG | 0.516199 | 7_3:-71690451 | None:intergenic |
| AGATTGTGAGAAAGATGAAG+AGG | 0.516959 | 7_3:+71689378 | Msa1121590:CDS |
| TGGAGGAGTGGTTTGGACGG+TGG | 0.517012 | 7_3:-71685147 | None:intergenic |
| AGAGATGGTGGTTGCGCTTG+GGG | 0.518092 | 7_3:+71691637 | Msa1121590:three_prime_UTR |
| TACCACCTGGAGGTGAAAGC+GGG | 0.518789 | 7_3:+71691468 | Msa1121590:CDS |
| GAATAAAGTGCGAGAAGTAT+CGG | 0.519941 | 7_3:+71690768 | Msa1121590:CDS |
| CAAAATTTGCTATGATCACA+GGG | 0.522003 | 7_3:-71690263 | None:intergenic |
| ATTTATAGTCATGTTGTTGG+AGG | 0.522578 | 7_3:+71689168 | Msa1121590:intron |
| GGAGGTGAAAGCGGGAAACC+TGG | 0.523706 | 7_3:+71691476 | Msa1121590:CDS |
| CTGCATCAAAATCATCACTA+AGG | 0.525700 | 7_3:+71690746 | Msa1121590:CDS |
| CTGAGAACAATTCTGGATAG+TGG | 0.526365 | 7_3:-71690680 | None:intergenic |
| GCCTCTCCCTCTACTGGCAA+AGG | 0.527705 | 7_3:+71690444 | Msa1121590:CDS |
| TTATAGTCAAAACTTAATCA+AGG | 0.530499 | 7_3:+71686724 | Msa1121590:CDS |
| ATTATAGGCAGATCTGTGTC+TGG | 0.530683 | 7_3:-71690501 | None:intergenic |
| CGATTTGGTGCTGGATCTTG+AGG | 0.530980 | 7_3:-71685188 | None:intergenic |
| AGGCAGATCTGTGTCTGGTA+TGG | 0.532867 | 7_3:-71690496 | None:intergenic |
| AGTACTTCTTGGCATCAAGA+TGG | 0.534096 | 7_3:-71688805 | None:intergenic |
| GGTGCTGGATCTTGAGGTGG+TGG | 0.537381 | 7_3:-71685182 | None:intergenic |
| GCAGAATATGACTTCGAAGA+TGG | 0.541181 | 7_3:-71691515 | None:intergenic |
| GAAAGAGACTCAGAAAATGT+AGG | 0.545807 | 7_3:-71691742 | None:intergenic |
| CAGCGATGAGGAATGGGAAG+AGG | 0.546041 | 7_3:+71689236 | Msa1121590:CDS |
| AGGGCATAAATAAAGTGTTA+GGG | 0.546701 | 7_3:+71690701 | Msa1121590:CDS |
| CACCCTCACAAACCTGCCAT+CGG | 0.547990 | 7_3:-71690804 | None:intergenic |
| CTTGGCTTGACAGTTAAACC+TGG | 0.550983 | 7_3:+71691303 | Msa1121590:CDS |
| GTACTTCTTGGCATCAAGAT+GGG | 0.553860 | 7_3:-71688804 | None:intergenic |
| AAAGATCCACGACAGGATCA+TGG | 0.554368 | 7_3:+71685915 | Msa1121590:CDS |
| CTGACAACATAATCAACGCT+TGG | 0.554493 | 7_3:-71689213 | None:intergenic |
| GGTTGTTTGCTTATTACAGA+GGG | 0.555082 | 7_3:+71685309 | Msa1121590:CDS |
| GACGGTGGTGTCGATTTGCA+TGG | 0.556166 | 7_3:-71685132 | None:intergenic |
| ACTCAGAAACTTCCTTACAT+TGG | 0.556844 | 7_3:-71691667 | None:intergenic |
| TCATCTGAGAGATACCCATC+TGG | 0.559172 | 7_3:-71689457 | None:intergenic |
| TATTAACGGAACTCCTAAGC+AGG | 0.561405 | 7_3:+71690320 | Msa1121590:CDS |
| GTGGAGGCAACAAAAGCACT+TGG | 0.561782 | 7_3:+71684969 | Msa1121590:five_prime_UTR |
| GGGAAATGAAAATGAAAATG+GGG | 0.562297 | 7_3:-71685053 | None:intergenic |
| ATGGATTCTTTGTACCAGAT+GGG | 0.562593 | 7_3:+71689443 | Msa1121590:CDS |
| GCTGTCTTGTGGATCATGGA+TGG | 0.564362 | 7_3:-71691537 | None:intergenic |
| ACTTTGTCGCTCTGAACAGA+GGG | 0.566161 | 7_3:-71687890 | None:intergenic |
| GAGGAAGGTTCAAAATCTGA+TGG | 0.568843 | 7_3:+71689409 | Msa1121590:CDS |
| AGGAATTGTGTACATTCTCA+AGG | 0.571342 | 7_3:-71690361 | None:intergenic |
| TTGTTGCCGAAATCTGTTCG+AGG | 0.572625 | 7_3:+71685862 | Msa1121590:CDS |
| GAAGAGGAATGTCAAGAGGA+AGG | 0.573812 | 7_3:+71689394 | Msa1121590:CDS |
| GGGTGCACAATTGGACCGAA+TGG | 0.576269 | 7_3:+71690104 | Msa1121590:intron |
| CTGAATTGTGAAGTGGCGAA+TGG | 0.576328 | 7_3:+71685458 | Msa1121590:CDS |
| GCAGCACCTTTGCCAGTAGA+GGG | 0.576917 | 7_3:-71690450 | None:intergenic |
| AGATGAAGAGGAATGTCAAG+AGG | 0.577660 | 7_3:+71689390 | Msa1121590:CDS |
| GGATGAGTTAGGCACCGAAA+AGG | 0.579468 | 7_3:+71688718 | Msa1121590:CDS |
| GCTCAAACAGAAAACAGAGA+TGG | 0.580529 | 7_3:+71688621 | Msa1121590:CDS |
| GAATTGTGAAGTGGCGAATG+GGG | 0.580861 | 7_3:+71685460 | Msa1121590:CDS |
| GACCGAATGGAAACAGATGT+TGG | 0.585217 | 7_3:+71690117 | Msa1121590:CDS |
| TTCAAAGTTGTCCCAAGGTG+AGG | 0.585887 | 7_3:+71687694 | Msa1121590:CDS |
| TTCATGTCTTTGGTGTTGGG+AGG | 0.591006 | 7_3:+71685604 | Msa1121590:CDS |
| CTTAACAAATCATCTGCAGT+GGG | 0.591857 | 7_3:-71687923 | None:intergenic |
| CCAAGAAGTACTATCGAGGA+AGG | 0.593952 | 7_3:+71688816 | Msa1121590:CDS |
| CTATGTCGATAACCGATGGC+AGG | 0.594128 | 7_3:+71690792 | Msa1121590:CDS |
| GGAAACAGATGTTGGCCTTG+AGG | 0.596770 | 7_3:+71690125 | Msa1121590:CDS |
| GCTGAGTAAAACTTCTACTG+AGG | 0.600514 | 7_3:+71686757 | Msa1121590:CDS |
| ATGAGAAATGTTGCGAACAG+AGG | 0.602168 | 7_3:+71687726 | Msa1121590:CDS |
| ATATATTGTAAAGAGAATGC+TGG | 0.604512 | 7_3:+71691716 | Msa1121590:three_prime_UTR |
| GGTGTCGATTTGCATGGTGG+TGG | 0.606355 | 7_3:-71685126 | None:intergenic |
| AACTTTGTCGCTCTGAACAG+AGG | 0.606807 | 7_3:-71687891 | None:intergenic |
| CAATCTGAAAGACTTTCACC+AGG | 0.607556 | 7_3:-71689349 | None:intergenic |
| TGATAGCTCATCTTGCTCAA+AGG | 0.609228 | 7_3:+71690152 | Msa1121590:CDS |
| GCTTAACAAATCATCTGCAG+TGG | 0.609619 | 7_3:-71687924 | None:intergenic |
| TGGGTATCTCTCAGATGATG+AGG | 0.610119 | 7_3:+71689462 | Msa1121590:CDS |
| GGTGGTTGCGGCGTTGATGG+AGG | 0.612733 | 7_3:+71685388 | Msa1121590:CDS |
| TCATCAACAAGCTTCGACAA+CGG | 0.616224 | 7_3:-71685422 | None:intergenic |
| AATTGTGAAGTGGCGAATGG+GGG | 0.623209 | 7_3:+71685461 | Msa1121590:CDS |
| GGGTTGTTTGCTTATTACAG+AGG | 0.629300 | 7_3:+71685308 | Msa1121590:CDS |
| TACTAAATCTGCAATTCATG+AGG | 0.629885 | 7_3:+71688697 | Msa1121590:CDS |
| TGAGAAGCTGAATTGTGAAG+TGG | 0.631929 | 7_3:+71685451 | Msa1121590:CDS |
| ATGGCAGCCAGATCAGGCAG+TGG | 0.631943 | 7_3:-71690477 | None:intergenic |
| TTAGGAGAAAGTAGTCCAGA+TGG | 0.632131 | 7_3:+71688752 | Msa1121590:CDS |
| ACTATCCAGAATTGTTCTCA+GGG | 0.635571 | 7_3:+71690682 | Msa1121590:CDS |
| TTACCACCTGGAGGTGAAAG+CGG | 0.636228 | 7_3:+71691467 | Msa1121590:CDS |
| ACAAGTTCAAAGTTGTCCCA+AGG | 0.638713 | 7_3:+71687689 | Msa1121590:CDS |
| AGGACGTCATCCATTAAGGA+AGG | 0.639077 | 7_3:+71689188 | Msa1121590:CDS |
| ACAACAAAAGAAGCAAGCAG+AGG | 0.639627 | 7_3:+71687751 | Msa1121590:CDS |
| GCTGGGCAGAGGATGATGTA+CGG | 0.640684 | 7_3:+71685539 | Msa1121590:CDS |
| GGTGGTGTCGATTTGCATGG+TGG | 0.642022 | 7_3:-71685129 | None:intergenic |
| ATTGACCTTAAGCAATGCGG+AGG | 0.643580 | 7_3:+71685353 | Msa1121590:CDS |
| CGGACTATGTCGATAACCGA+TGG | 0.644637 | 7_3:+71690788 | Msa1121590:CDS |
| TATGACTTCGAAGATGGCTG+TGG | 0.646647 | 7_3:-71691509 | None:intergenic |
| AAAGGATGACATAGAGACTG+AGG | 0.647162 | 7_3:+71690170 | Msa1121590:CDS |
| AAGTAGTGATATTAAGCCTG+AGG | 0.651722 | 7_3:+71688006 | Msa1121590:CDS |
| AACAGATGTTGGCCTTGAGG+AGG | 0.654012 | 7_3:+71690128 | Msa1121590:CDS |
| TTTGGTGCTGGATCTTGAGG+TGG | 0.655924 | 7_3:-71685185 | None:intergenic |
| TTCCCGCTTTCACCTCCAGG+TGG | 0.657077 | 7_3:-71691470 | None:intergenic |
| ATTGTGAAGTGGCGAATGGG+GGG | 0.662126 | 7_3:+71685462 | Msa1121590:CDS |
| ATGAGCTATCAACCTCCTCA+AGG | 0.664925 | 7_3:-71690140 | None:intergenic |
| TTATGTTGTCAGCAGCGATG+AGG | 0.668119 | 7_3:+71689224 | Msa1121590:CDS |
| ATGCGGAGGTTCGAGAAACG+TGG | 0.674122 | 7_3:+71685367 | Msa1121590:CDS |
| TGGAGGCAACAAAAGCACTT+GGG | 0.674285 | 7_3:+71684970 | Msa1121590:five_prime_UTR |
| ATACAGCCATGATCCTGTCG+TGG | 0.676276 | 7_3:-71685921 | None:intergenic |
| TTTCAGAGAAGAGCAGTGGG+GGG | 0.681849 | 7_3:+71691408 | Msa1121590:intron |
| CGGAGGTTCGAGAAACGTGG+TGG | 0.685380 | 7_3:+71685370 | Msa1121590:CDS |
| TCAAACAGAAAACAGAGATG+GGG | 0.687278 | 7_3:+71688623 | Msa1121590:CDS |
| GATGCCAAGAAGTACTATCG+AGG | 0.690027 | 7_3:+71688812 | Msa1121590:CDS |
| AAAAGGTGCTTACCACCTGG+AGG | 0.699844 | 7_3:+71691458 | Msa1121590:CDS |
| GTTGTTTGCTTATTACAGAG+GGG | 0.700903 | 7_3:+71685310 | Msa1121590:CDS |
| AATTCTATATAAGAACCACC+AGG | 0.708687 | 7_3:-71690381 | None:intergenic |
| GTGATTGACCTTAAGCAATG+CGG | 0.712346 | 7_3:+71685350 | Msa1121590:CDS |
| AGAATGTACACAATTCCTGG+TGG | 0.717887 | 7_3:+71690366 | Msa1121590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATTGTAAAATAACA+GGG | - | chr7_3:71687326-71687345 | None:intergenic | 10.0% |
| !! | AATAAAAATTGTAAAATAAC+AGG | - | chr7_3:71687327-71687346 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTTTTTTGTG+AGG | + | chr7_3:71688211-71688230 | Msa1121590:intron | 10.0% |
| !!! | GATTTTTTTTTCTTGATTTT+TGG | + | chr7_3:71685628-71685647 | Msa1121590:intron | 15.0% |
| !!! | ATTAAGTTTTGACTATAATT+AGG | - | chr7_3:71686722-71686741 | None:intergenic | 15.0% |
| !!! | TTTTTCTAAATTATAATTGC+AGG | + | chr7_3:71686901-71686920 | Msa1121590:intron | 15.0% |
| !!! | TTTTCTAAATTATAATTGCA+GGG | + | chr7_3:71686902-71686921 | Msa1121590:intron | 15.0% |
| !! | TTGTAAAATGACTTAAATTT+GGG | - | chr7_3:71687248-71687267 | None:intergenic | 15.0% |
| !! | ATTGTAAAATGACTTAAATT+TGG | - | chr7_3:71687249-71687268 | None:intergenic | 15.0% |
| !! | TTAAAATGAAAAATTGGATA+TGG | + | chr7_3:71688124-71688143 | Msa1121590:intron | 15.0% |
| !! | TAAAATGAAAAATTGGATAT+GGG | + | chr7_3:71688125-71688144 | Msa1121590:intron | 15.0% |
| !! | AGAATCAAGAAAATTATAAT+AGG | - | chr7_3:71688345-71688364 | None:intergenic | 15.0% |
| !! | ATCATCATTAATTTATTGTA+TGG | + | chr7_3:71689088-71689107 | Msa1121590:intron | 15.0% |
| !!! | AATGATGTTCTTTATTTTTA+AGG | + | chr7_3:71689321-71689340 | Msa1121590:intron | 15.0% |
| !! | TAGTGTAAATCATTAAAAAT+TGG | + | chr7_3:71690863-71690882 | Msa1121590:intron | 15.0% |
| !! | TAAAGTGAACTGAAAATATT+TGG | - | chr7_3:71685005-71685024 | None:intergenic | 20.0% |
| !! | TGAAAAATAAAAACCCTAAT+CGG | - | chr7_3:71685090-71685109 | None:intergenic | 20.0% |
| !!! | ATGAATGTTTTTTAAGATGT+TGG | + | chr7_3:71685729-71685748 | Msa1121590:intron | 20.0% |
| !!! | CAATTACATGCTTTAAAAAA+GGG | - | chr7_3:71686591-71686610 | None:intergenic | 20.0% |
| !!! | ACAATTACATGCTTTAAAAA+AGG | - | chr7_3:71686592-71686611 | None:intergenic | 20.0% |
| !!! | TGTAATTGTTGTGAAAATTT+TGG | + | chr7_3:71686603-71686622 | Msa1121590:intron | 20.0% |
| !! | TTATAGTCAAAACTTAATCA+AGG | + | chr7_3:71686724-71686743 | Msa1121590:CDS | 20.0% |
| !!! | TAATTAGCAATTTTTCTTCT+TGG | - | chr7_3:71686944-71686963 | None:intergenic | 20.0% |
| !! | AAAATTGCTAATTAAACAGT+TGG | + | chr7_3:71686950-71686969 | Msa1121590:CDS | 20.0% |
| !!! | TAACAAATGTAATGGAAATT+TGG | - | chr7_3:71687174-71687193 | None:intergenic | 20.0% |
| !! | ACAGGGTAATAAATATTAAA+GGG | - | chr7_3:71687309-71687328 | None:intergenic | 20.0% |
| !! | AACAGGGTAATAAATATTAA+AGG | - | chr7_3:71687310-71687329 | None:intergenic | 20.0% |
| !!! | ATTTCTTAATTTGTACGAAA+TGG | + | chr7_3:71687406-71687425 | Msa1121590:intron | 20.0% |
| !! | TTATTTATGTAGTACAAAAG+GGG | - | chr7_3:71688294-71688313 | None:intergenic | 20.0% |
| !! | GTTATTTATGTAGTACAAAA+GGG | - | chr7_3:71688295-71688314 | None:intergenic | 20.0% |
| !!! | TGTTATTTATGTAGTACAAA+AGG | - | chr7_3:71688296-71688315 | None:intergenic | 20.0% |
| !! | ATAGGAAGATAATATTTACA+AGG | - | chr7_3:71688327-71688346 | None:intergenic | 20.0% |
| !! | GAATGTTATACTTGTAAAAA+AGG | + | chr7_3:71688427-71688446 | Msa1121590:intron | 20.0% |
| !!! | ATTTCATATTGACTTATACT+AGG | + | chr7_3:71688924-71688943 | Msa1121590:intron | 20.0% |
| !! | TAAATGCATATAATTGTTTC+AGG | + | chr7_3:71689058-71689077 | Msa1121590:intron | 20.0% |
| !!! | ATTAAAATGTATTTTGGTAC+CGG | - | chr7_3:71689571-71689590 | None:intergenic | 20.0% |
| !!! | TCGACAATTAAAATGTATTT+TGG | - | chr7_3:71689577-71689596 | None:intergenic | 20.0% |
| !! | TTATGTTAGACTTCTTATTA+TGG | - | chr7_3:71689878-71689897 | None:intergenic | 20.0% |
| !! | AAATCAGAACTTACAATTAT+AGG | - | chr7_3:71690519-71690538 | None:intergenic | 20.0% |
| !! | AAAACAAATAAATCACTGTA+AGG | - | chr7_3:71690652-71690671 | None:intergenic | 20.0% |
| !! | TGTAAATCATTAAAAATTGG+TGG | + | chr7_3:71690866-71690885 | Msa1121590:intron | 20.0% |
| !!! | CTTTTTGTAAAAATTAGAGA+TGG | + | chr7_3:71691622-71691641 | Msa1121590:three_prime_UTR | 20.0% |
| !!! | AACTGAAAATATTTGGTGTT+TGG | - | chr7_3:71684998-71685017 | None:intergenic | 25.0% |
| ! | AGGGAAATGAAAATGAAAAT+GGG | - | chr7_3:71685057-71685076 | None:intergenic | 25.0% |
| ! | AAGGGAAATGAAAATGAAAA+TGG | - | chr7_3:71685058-71685077 | None:intergenic | 25.0% |
| ! | GAAAAAAAGATGTTAATTCG+CGG | + | chr7_3:71685234-71685253 | Msa1121590:CDS | 25.0% |
| !!! | TATTTGTTGTGTGATTTAAC+TGG | + | chr7_3:71685686-71685705 | Msa1121590:intron | 25.0% |
| !!! | ATTTGTTGTGTGATTTAACT+GGG | + | chr7_3:71685687-71685706 | Msa1121590:intron | 25.0% |
| !!! | TTGGTTATGTTGATAGTAAT+TGG | + | chr7_3:71685748-71685767 | Msa1121590:intron | 25.0% |
| !!! | TGGTTATGTTGATAGTAATT+GGG | + | chr7_3:71685749-71685768 | Msa1121590:intron | 25.0% |
| !! | TATGTTGTTATTGTAGACTA+GGG | + | chr7_3:71685831-71685850 | Msa1121590:intron | 25.0% |
| ! | AACTTGGAATTCTAAACAAA+CGG | - | chr7_3:71686111-71686130 | None:intergenic | 25.0% |
| !!! | AACAAAGTATTGTCAAATAG+TGG | + | chr7_3:71686407-71686426 | Msa1121590:intron | 25.0% |
| ! | GAACAATTCATATATTTGCA+AGG | - | chr7_3:71686874-71686893 | None:intergenic | 25.0% |
| ! | AATCAAAACAACACTTACAA+TGG | - | chr7_3:71687057-71687076 | None:intergenic | 25.0% |
| ! | GTATCTTCTAACAAATGTAA+TGG | - | chr7_3:71687182-71687201 | None:intergenic | 25.0% |
| ! | TCCAAATTATTAGTCAGTTT+GGG | + | chr7_3:71687210-71687229 | Msa1121590:intron | 25.0% |
| ! | ACAAAATTACCCTTCATTTA+TGG | - | chr7_3:71687363-71687382 | None:intergenic | 25.0% |
| ! | TGGCAAAATGACTTATAATT+TGG | + | chr7_3:71687426-71687445 | Msa1121590:intron | 25.0% |
| ! | GGCAAAATGACTTATAATTT+GGG | + | chr7_3:71687427-71687446 | Msa1121590:intron | 25.0% |
| ! | AAATGACTTATAATTTGGGA+TGG | + | chr7_3:71687431-71687450 | Msa1121590:intron | 25.0% |
| ! | AACATACAGTATAAAAGGAA+AGG | - | chr7_3:71688243-71688262 | None:intergenic | 25.0% |
| ! | GGAAAAACATACAGTATAAA+AGG | - | chr7_3:71688248-71688267 | None:intergenic | 25.0% |
| ! | AAAGAATAATACCCGTAAAA+CGG | - | chr7_3:71688271-71688290 | None:intergenic | 25.0% |
| ! | AGATAATATTTACAAGGAGT+CGG | - | chr7_3:71688321-71688340 | None:intergenic | 25.0% |
| ! | TGTGGATATGATGAAAAATA+AGG | - | chr7_3:71688456-71688475 | None:intergenic | 25.0% |
| !! | GCATTTAATTTAACTAACCA+GGG | - | chr7_3:71689045-71689064 | None:intergenic | 25.0% |
| !! | TGCATTTAATTTAACTAACC+AGG | - | chr7_3:71689046-71689065 | None:intergenic | 25.0% |
| ! | TGTATTTATAGTCATGTTGT+TGG | + | chr7_3:71689165-71689184 | Msa1121590:intron | 25.0% |
| ! | ATGAATAAGATAAGATGCAA+AGG | - | chr7_3:71689271-71689290 | None:intergenic | 25.0% |
| !!! | GATGTTCTTTATTTTTAAGG+AGG | + | chr7_3:71689324-71689343 | Msa1121590:intron | 25.0% |
| !! | TAATGGGATAGTTTTTGAAT+GGG | - | chr7_3:71689774-71689793 | None:intergenic | 25.0% |
| !! | TTAATGGGATAGTTTTTGAA+TGG | - | chr7_3:71689775-71689794 | None:intergenic | 25.0% |
| ! | GGAATAAATAGAGAAATGAA+AGG | - | chr7_3:71689807-71689826 | None:intergenic | 25.0% |
| !! | AGTCAGTTATGAGTAATTTT+CGG | - | chr7_3:71689828-71689847 | None:intergenic | 25.0% |
| ! | ATTTCATTAACCAATTGTAG+TGG | - | chr7_3:71690069-71690088 | None:intergenic | 25.0% |
| !!! | TGAAATCTTCATTTTTATGC+AGG | + | chr7_3:71690083-71690102 | Msa1121590:intron | 25.0% |
| !!! | GAAATCTTCATTTTTATGCA+GGG | + | chr7_3:71690084-71690103 | Msa1121590:intron | 25.0% |
| !!! | AGCAAATTTTGTTTATGACA+AGG | + | chr7_3:71690275-71690294 | Msa1121590:CDS | 25.0% |
| ! | AAAGCAAGATAAAAGGAAAA+TGG | - | chr7_3:71690583-71690602 | None:intergenic | 25.0% |
| ! | TTTCAGAAAAGCAAGATAAA+AGG | - | chr7_3:71690590-71690609 | None:intergenic | 25.0% |
| ! | GTAAGGTGATAAAATTTACA+TGG | - | chr7_3:71690635-71690654 | None:intergenic | 25.0% |
| !!! | CAGTGATTTATTTGTTTTTC+AGG | + | chr7_3:71690654-71690673 | Msa1121590:intron | 25.0% |
| ! | CAAAAGATCTTATATCTGTT+GGG | + | chr7_3:71691013-71691032 | Msa1121590:intron | 25.0% |
| ! | TCAATCATAAATTACAGCAT+TGG | - | chr7_3:71691215-71691234 | None:intergenic | 25.0% |
| ! | ACAGCTAAATCAAAAAAACT+GGG | - | chr7_3:71691357-71691376 | None:intergenic | 25.0% |
| !!! | AATGTCTTTTTTGCTACTTT+TGG | + | chr7_3:71691598-71691617 | Msa1121590:three_prime_UTR | 25.0% |
| ! | TTTGTAAAAATTAGAGATGG+TGG | + | chr7_3:71691625-71691644 | Msa1121590:three_prime_UTR | 25.0% |
| ! | ATATATTGTAAAGAGAATGC+TGG | + | chr7_3:71691716-71691735 | Msa1121590:three_prime_UTR | 25.0% |
| GGGAAATGAAAATGAAAATG+GGG | - | chr7_3:71685056-71685075 | None:intergenic | 30.0% | |
| AAAATAAAAACCCTAATCGG+CGG | - | chr7_3:71685087-71685106 | None:intergenic | 30.0% | |
| AAAATATCAGCATCAGCATT+GGG | - | chr7_3:71685569-71685588 | None:intergenic | 30.0% | |
| ATCATTCTGATTCATGTCTT+TGG | + | chr7_3:71685594-71685613 | Msa1121590:CDS | 30.0% | |
| TGTTGAAGTTGAATGTGTAT+TGG | + | chr7_3:71685776-71685795 | Msa1121590:intron | 30.0% | |
| ! | CTATGTTGTTATTGTAGACT+AGG | + | chr7_3:71685830-71685849 | Msa1121590:intron | 30.0% |
| TGACAACACAGATAAATCAA+AGG | - | chr7_3:71686009-71686028 | None:intergenic | 30.0% | |
| TTGTCAAATACGAACTCAAA+CGG | + | chr7_3:71686023-71686042 | Msa1121590:intron | 30.0% | |
| !! | TCGTTTGAGTTTGTTAAACT+TGG | - | chr7_3:71686127-71686146 | None:intergenic | 30.0% |
| CATAGTGAAATCTGAACAAA+TGG | - | chr7_3:71686219-71686238 | None:intergenic | 30.0% | |
| AGTAAAAACAGTGTTGTCAA+GGG | - | chr7_3:71686487-71686506 | None:intergenic | 30.0% | |
| !!! | AACACTGTTTTTACTGGAAA+AGG | + | chr7_3:71686492-71686511 | Msa1121590:intron | 30.0% |
| TAGCGGAATATGCAAATAAT+TGG | + | chr7_3:71686528-71686547 | Msa1121590:intron | 30.0% | |
| ! | AGTTTTACTCAGCTTTTTAG+AGG | - | chr7_3:71686750-71686769 | None:intergenic | 30.0% |
| GTCCAAATTATTAGTCAGTT+TGG | + | chr7_3:71687209-71687228 | Msa1121590:intron | 30.0% | |
| TCCCAAACTGACTAATAATT+TGG | - | chr7_3:71687214-71687233 | None:intergenic | 30.0% | |
| TTTCCCATACCATAAATGAA+GGG | + | chr7_3:71687351-71687370 | Msa1121590:intron | 30.0% | |
| TTACCCTTCATTTATGGTAT+GGG | - | chr7_3:71687357-71687376 | None:intergenic | 30.0% | |
| ATTACCCTTCATTTATGGTA+TGG | - | chr7_3:71687358-71687377 | None:intergenic | 30.0% | |
| !!! | TGCAAATACTTTTGGCTTTT+TGG | - | chr7_3:71687478-71687497 | None:intergenic | 30.0% |
| ! | TTGGATTGGAAATTAACTTG+CGG | + | chr7_3:71687509-71687528 | Msa1121590:intron | 30.0% |
| TAAGAATGACTATCTCAACT+AGG | - | chr7_3:71687579-71687598 | None:intergenic | 30.0% | |
| ACTTGTTTCCTAGAACAATT+AGG | - | chr7_3:71687675-71687694 | None:intergenic | 30.0% | |
| ACAAAAGCAAGTCTCAATTA+TGG | + | chr7_3:71687838-71687857 | Msa1121590:CDS | 30.0% | |
| AAGAATAATACCCGTAAAAC+GGG | - | chr7_3:71688270-71688289 | None:intergenic | 30.0% | |
| !! | TTTTTAGAAAACCTAAGGTG+TGG | - | chr7_3:71688474-71688493 | None:intergenic | 30.0% |
| !!! | GTGGTTTTTTAGAAAACCTA+AGG | - | chr7_3:71688479-71688498 | None:intergenic | 30.0% |
| TTGTTAAAAGCTTCAGTCTT+GGG | - | chr7_3:71688662-71688681 | None:intergenic | 30.0% | |
| TTTGTTAAAAGCTTCAGTCT+TGG | - | chr7_3:71688663-71688682 | None:intergenic | 30.0% | |
| TACTAAATCTGCAATTCATG+AGG | + | chr7_3:71688697-71688716 | Msa1121590:CDS | 30.0% | |
| ! | AGCATGATCTAACCTTTTAA+CGG | - | chr7_3:71688894-71688913 | None:intergenic | 30.0% |
| CTAAACATTTGCATAACTAG+AGG | - | chr7_3:71689004-71689023 | None:intergenic | 30.0% | |
| TGTTTAGTCACTACTTCTAA+AGG | + | chr7_3:71689017-71689036 | Msa1121590:intron | 30.0% | |
| TTATTGTATGGTGTGATATC+TGG | + | chr7_3:71689100-71689119 | Msa1121590:intron | 30.0% | |
| AATCTCAACTAGACATATAC+TGG | - | chr7_3:71689128-71689147 | None:intergenic | 30.0% | |
| ATTTATAGTCATGTTGTTGG+AGG | + | chr7_3:71689168-71689187 | Msa1121590:intron | 30.0% | |
| AGCTATAATGTGAAAGAAAC+CGG | + | chr7_3:71689549-71689568 | Msa1121590:intron | 30.0% | |
| AAGTTCTTGAATTCTTGGAA+GGG | - | chr7_3:71689734-71689753 | None:intergenic | 30.0% | |
| !! | GATAGTTTTTGAATGGGTTT+GGG | - | chr7_3:71689768-71689787 | None:intergenic | 30.0% |
| CTTCTTATTATGGCAGTTAA+GGG | - | chr7_3:71689868-71689887 | None:intergenic | 30.0% | |
| ACTTCTTATTATGGCAGTTA+AGG | - | chr7_3:71689869-71689888 | None:intergenic | 30.0% | |
| ! | ACATAATGTTCTTGACCTTT+TGG | + | chr7_3:71689892-71689911 | Msa1121590:intron | 30.0% |
| ACAGATTTCAAATCACCAAA+AGG | - | chr7_3:71689910-71689929 | None:intergenic | 30.0% | |
| ATGTACAGAATAGATACCAA+TGG | - | chr7_3:71690039-71690058 | None:intergenic | 30.0% | |
| !! | CAAAATTTGCTATGATCACA+GGG | - | chr7_3:71690266-71690285 | None:intergenic | 30.0% |
| !! | ACAAAATTTGCTATGATCAC+AGG | - | chr7_3:71690267-71690286 | None:intergenic | 30.0% |
| TTATTGGATCGCAGTATTAA+CGG | + | chr7_3:71690306-71690325 | Msa1121590:CDS | 30.0% | |
| AATTCTATATAAGAACCACC+AGG | - | chr7_3:71690384-71690403 | None:intergenic | 30.0% | |
| ! | TTCTTCTTGCATTTTATCAG+TGG | - | chr7_3:71690415-71690434 | None:intergenic | 30.0% |
| !! | TTGTAAGTTCTGATTTTGCA+CGG | + | chr7_3:71690523-71690542 | Msa1121590:intron | 30.0% |
| ! | AGGGCATAAATAAAGTGTTA+GGG | + | chr7_3:71690701-71690720 | Msa1121590:CDS | 30.0% |
| TGTCAAGGGACTAAATATAA+CGG | + | chr7_3:71690900-71690919 | Msa1121590:intron | 30.0% | |
| ! | TAAATATAACGGGAACACAA+TGG | + | chr7_3:71690911-71690930 | Msa1121590:intron | 30.0% |
| CATAGCTGTAAAAGGTTAAA+GGG | - | chr7_3:71690956-71690975 | None:intergenic | 30.0% | |
| ! | CCAACAGATATAAGATCTTT+TGG | - | chr7_3:71691015-71691034 | None:intergenic | 30.0% |
| CCAAAAGATCTTATATCTGT+TGG | + | chr7_3:71691012-71691031 | Msa1121590:intron | 30.0% | |
| ACATCGTAAATTCAGCTTAT+TGG | - | chr7_3:71691246-71691265 | None:intergenic | 30.0% | |
| TTACGATGTTATGTTTGTTC+AGG | + | chr7_3:71691257-71691276 | Msa1121590:intron | 30.0% | |
| GACAGCTAAATCAAAAAAAC+TGG | - | chr7_3:71691358-71691377 | None:intergenic | 30.0% | |
| ! | TTGCTGCATTTTTCTCTAAA+AGG | + | chr7_3:71691441-71691460 | Msa1121590:CDS | 30.0% |
| ! | GAACATTTGGAATTTGGAAG+TGG | + | chr7_3:71684950-71684969 | Msa1121590:five_prime_UTR | 35.0% |
| !!! | CATCTTTTTTTCGCTTTCGA+GGG | - | chr7_3:71685226-71685245 | None:intergenic | 35.0% |
| !!! | ACATCTTTTTTTCGCTTTCG+AGG | - | chr7_3:71685227-71685246 | None:intergenic | 35.0% |
| GGTTGTTTGCTTATTACAGA+GGG | + | chr7_3:71685309-71685328 | Msa1121590:CDS | 35.0% | |
| GTTGTTTGCTTATTACAGAG+GGG | + | chr7_3:71685310-71685329 | Msa1121590:CDS | 35.0% | |
| CAAAATATCAGCATCAGCAT+TGG | - | chr7_3:71685570-71685589 | None:intergenic | 35.0% | |
| ! | CAATGCTGATGCTGATATTT+TGG | + | chr7_3:71685568-71685587 | Msa1121590:CDS | 35.0% |
| !! | TGATTCATGTCTTTGGTGTT+GGG | + | chr7_3:71685601-71685620 | Msa1121590:CDS | 35.0% |
| ! | TGGTATGGATTACATTGCTT+TGG | + | chr7_3:71685945-71685964 | Msa1121590:intron | 35.0% |
| ! | TTTGAATGCTGTTAGTGGAT+TGG | + | chr7_3:71685981-71686000 | Msa1121590:intron | 35.0% |
| ATCACTATTCACTTGCATAG+TGG | + | chr7_3:71686153-71686172 | Msa1121590:intron | 35.0% | |
| TCACTATTCACTTGCATAGT+GGG | + | chr7_3:71686154-71686173 | Msa1121590:intron | 35.0% | |
| TAAACAAAACCGCTACTGTT+TGG | - | chr7_3:71686305-71686324 | None:intergenic | 35.0% | |
| TAAATGCAGCTATAGAGCTA+TGG | - | chr7_3:71686340-71686359 | None:intergenic | 35.0% | |
| AAAGCATAACGCAGAACAAT+GGG | - | chr7_3:71686385-71686404 | None:intergenic | 35.0% | |
| ! | AAAAGCATAACGCAGAACAA+TGG | - | chr7_3:71686386-71686405 | None:intergenic | 35.0% |
| CAGTAAAAACAGTGTTGTCA+AGG | - | chr7_3:71686488-71686507 | None:intergenic | 35.0% | |
| !!! | CTTGACAACACTGTTTTTAC+TGG | + | chr7_3:71686486-71686505 | Msa1121590:intron | 35.0% |
| AAGGAATATGTTGTCGATAG+CGG | + | chr7_3:71686511-71686530 | Msa1121590:intron | 35.0% | |
| GTAATTGAACATGTCAGGAT+AGG | - | chr7_3:71686852-71686871 | None:intergenic | 35.0% | |
| TTGTTTGCAGTTCACATTGT+AGG | - | chr7_3:71687031-71687050 | None:intergenic | 35.0% | |
| AGCTCCAATTACTTCTTACT+CGG | + | chr7_3:71687094-71687113 | Msa1121590:intron | 35.0% | |
| AACACCGAGTAAGAAGTAAT+TGG | - | chr7_3:71687101-71687120 | None:intergenic | 35.0% | |
| CTGACTAATAATTTGGACAG+AGG | - | chr7_3:71687207-71687226 | None:intergenic | 35.0% | |
| CTTTCCCATACCATAAATGA+AGG | + | chr7_3:71687350-71687369 | Msa1121590:intron | 35.0% | |
| ! | TGACTTATAATTTGGGATGG+TGG | + | chr7_3:71687434-71687453 | Msa1121590:intron | 35.0% |
| ! | GACTTATAATTTGGGATGGT+GGG | + | chr7_3:71687435-71687454 | Msa1121590:intron | 35.0% |
| ! | CAACATCGTGCAAATACTTT+TGG | - | chr7_3:71687486-71687505 | None:intergenic | 35.0% |
| CTTAACAAATCATCTGCAGT+GGG | - | chr7_3:71687926-71687945 | None:intergenic | 35.0% | |
| TATGTCAGCTACTCTTTCAA+TGG | + | chr7_3:71687967-71687986 | Msa1121590:CDS | 35.0% | |
| AAGTAGTGATATTAAGCCTG+AGG | + | chr7_3:71688006-71688025 | Msa1121590:CDS | 35.0% | |
| ATATGTACAGTGCACAAGAT+TGG | - | chr7_3:71688083-71688102 | None:intergenic | 35.0% | |
| TTGTGCACTGTACATATACA+TGG | + | chr7_3:71688086-71688105 | Msa1121590:intron | 35.0% | |
| ! | GTATGTTTTTCCCCGTTTTA+CGG | + | chr7_3:71688256-71688275 | Msa1121590:intron | 35.0% |
| ! | TATGTTTTTCCCCGTTTTAC+GGG | + | chr7_3:71688257-71688276 | Msa1121590:intron | 35.0% |
| AGAATAATACCCGTAAAACG+GGG | - | chr7_3:71688269-71688288 | None:intergenic | 35.0% | |
| TTTCATCATATCCACACCTT+AGG | + | chr7_3:71688460-71688479 | Msa1121590:intron | 35.0% | |
| TGAAAAATGCTTGACTTTGC+AGG | + | chr7_3:71688558-71688577 | Msa1121590:intron | 35.0% | |
| TTTCATTTATGGCGCTCTTT+AGG | + | chr7_3:71688587-71688606 | Msa1121590:CDS | 35.0% | |
| CTCAAACAGAAAACAGAGAT+GGG | + | chr7_3:71688622-71688641 | Msa1121590:CDS | 35.0% | |
| TCAAACAGAAAACAGAGATG+GGG | + | chr7_3:71688623-71688642 | Msa1121590:CDS | 35.0% | |
| ATTGAGCATGAATTACCATC+TGG | - | chr7_3:71688770-71688789 | None:intergenic | 35.0% | |
| ! | GCATGATCTAACCTTTTAAC+GGG | - | chr7_3:71688893-71688912 | None:intergenic | 35.0% |
| !!! | TTTATTTTTAAGGAGGAGCC+TGG | + | chr7_3:71689331-71689350 | Msa1121590:intron | 35.0% |
| AGATTGTGAGAAAGATGAAG+AGG | + | chr7_3:71689378-71689397 | Msa1121590:CDS | 35.0% | |
| ATGGATTCTTTGTACCAGAT+GGG | + | chr7_3:71689443-71689462 | Msa1121590:CDS | 35.0% | |
| !! | ACCAAGACTCTGAAATTTCT+TGG | - | chr7_3:71689709-71689728 | None:intergenic | 35.0% |
| CAAGTTCTTGAATTCTTGGA+AGG | - | chr7_3:71689735-71689754 | None:intergenic | 35.0% | |
| CTTCCAAGAATTCAAGAACT+TGG | + | chr7_3:71689733-71689752 | Msa1121590:intron | 35.0% | |
| AGACCAAGTTCTTGAATTCT+TGG | - | chr7_3:71689739-71689758 | None:intergenic | 35.0% | |
| !! | GGATAGTTTTTGAATGGGTT+TGG | - | chr7_3:71689769-71689788 | None:intergenic | 35.0% |
| GAAAGGAGAAAGCGATTAAT+GGG | - | chr7_3:71689790-71689809 | None:intergenic | 35.0% | |
| TGAAAGGAGAAAGCGATTAA+TGG | - | chr7_3:71689791-71689810 | None:intergenic | 35.0% | |
| TGATCCAATGAAAAAAGCTG+AGG | + | chr7_3:71689960-71689979 | Msa1121590:intron | 35.0% | |
| ACAGAATAGATACCAATGGT+TGG | - | chr7_3:71690035-71690054 | None:intergenic | 35.0% | |
| CATTTGAAGACCACTACAAT+TGG | + | chr7_3:71690056-71690075 | Msa1121590:intron | 35.0% | |
| ! | TGACAAGGAGTTTTCGTTAT+TGG | + | chr7_3:71690290-71690309 | Msa1121590:CDS | 35.0% |
| AGGAATTGTGTACATTCTCA+AGG | - | chr7_3:71690364-71690383 | None:intergenic | 35.0% | |
| TTGAGAATGTACACAATTCC+TGG | + | chr7_3:71690363-71690382 | Msa1121590:CDS | 35.0% | |
| ACTATCCAGAATTGTTCTCA+GGG | + | chr7_3:71690682-71690701 | Msa1121590:CDS | 35.0% | |
| ! | CAGGGCATAAATAAAGTGTT+AGG | + | chr7_3:71690700-71690719 | Msa1121590:CDS | 35.0% |
| !! | AGTGATGATTTTGATGCAGA+AGG | - | chr7_3:71690745-71690764 | None:intergenic | 35.0% |
| CTGCATCAAAATCATCACTA+AGG | + | chr7_3:71690746-71690765 | Msa1121590:CDS | 35.0% | |
| ! | GAATAAAGTGCGAGAAGTAT+CGG | + | chr7_3:71690768-71690787 | Msa1121590:CDS | 35.0% |
| AGCAGTAATCACTAGATTGT+GGG | - | chr7_3:71690835-71690854 | None:intergenic | 35.0% | |
| TAGCAGTAATCACTAGATTG+TGG | - | chr7_3:71690836-71690855 | None:intergenic | 35.0% | |
| GTCAAGGGACTAAATATAAC+GGG | + | chr7_3:71690901-71690920 | Msa1121590:intron | 35.0% | |
| CCATAGCTGTAAAAGGTTAA+AGG | - | chr7_3:71690957-71690976 | None:intergenic | 35.0% | |
| ! | CCTTTAACCTTTTACAGCTA+TGG | + | chr7_3:71690954-71690973 | Msa1121590:intron | 35.0% |
| ! | TAACCTTTTACAGCTATGGT+TGG | + | chr7_3:71690958-71690977 | Msa1121590:intron | 35.0% |
| TACTTGAACTTAACCTGAAC+TGG | + | chr7_3:71691040-71691059 | Msa1121590:intron | 35.0% | |
| TTCATTGGAGAGACATATTC+AGG | - | chr7_3:71691166-71691185 | None:intergenic | 35.0% | |
| GGATACATTTCGAAGTTCAT+TGG | - | chr7_3:71691181-71691200 | None:intergenic | 35.0% | |
| ! | TCAGGTGAAGAAAGAAGTAT+TGG | + | chr7_3:71691275-71691294 | Msa1121590:intron | 35.0% |
| !! | AAAGAAGTATTGGCTAAGCT+TGG | + | chr7_3:71691285-71691304 | Msa1121590:CDS | 35.0% |
| CAAAGTCAAGATTTCATACC+AGG | - | chr7_3:71691324-71691343 | None:intergenic | 35.0% | |
| ! | AATTTTCAGAGAAGAGCAGT+GGG | + | chr7_3:71691405-71691424 | Msa1121590:intron | 35.0% |
| AAAAATGCAGCAATGCTTCT+TGG | - | chr7_3:71691434-71691453 | None:intergenic | 35.0% | |
| ACTCAGAAACTTCCTTACAT+TGG | - | chr7_3:71691670-71691689 | None:intergenic | 35.0% | |
| ! | CATTTGGAATTTGGAAGTGG+AGG | + | chr7_3:71684953-71684972 | Msa1121590:five_prime_UTR | 40.0% |
| !!! | TTTTTTTCGCTTTCGAGGGT+TGG | - | chr7_3:71685222-71685241 | None:intergenic | 40.0% |
| ! | ATTTGCGCTTGTTTCTCTTC+GGG | - | chr7_3:71685263-71685282 | None:intergenic | 40.0% |
| ! | GATTTGCGCTTGTTTCTCTT+CGG | - | chr7_3:71685264-71685283 | None:intergenic | 40.0% |
| GGGTTGTTTGCTTATTACAG+AGG | + | chr7_3:71685308-71685327 | Msa1121590:CDS | 40.0% | |
| ! | TGCTTATTACAGAGGGGTTT+TGG | + | chr7_3:71685316-71685335 | Msa1121590:CDS | 40.0% |
| GTGATTGACCTTAAGCAATG+CGG | + | chr7_3:71685350-71685369 | Msa1121590:CDS | 40.0% | |
| TCATCAACAAGCTTCGACAA+CGG | - | chr7_3:71685425-71685444 | None:intergenic | 40.0% | |
| TGAGAAGCTGAATTGTGAAG+TGG | + | chr7_3:71685451-71685470 | Msa1121590:CDS | 40.0% | |
| TGAATTGTGAAGTGGCGAAT+GGG | + | chr7_3:71685459-71685478 | Msa1121590:CDS | 40.0% | |
| !! | AAGAGTAGTGTGTTGTTTGC+TGG | + | chr7_3:71685521-71685540 | Msa1121590:CDS | 40.0% |
| !! | AGAGTAGTGTGTTGTTTGCT+GGG | + | chr7_3:71685522-71685541 | Msa1121590:CDS | 40.0% |
| ! | CTGATTCATGTCTTTGGTGT+TGG | + | chr7_3:71685600-71685619 | Msa1121590:CDS | 40.0% |
| ! | TTGTTATTCGACGCACTTGT+CGG | + | chr7_3:71685890-71685909 | Msa1121590:CDS | 40.0% |
| TACATTGCTTTGGCTGACTA+TGG | + | chr7_3:71685955-71685974 | Msa1121590:intron | 40.0% | |
| TGCTATATCACTTGCATAGC+TGG | + | chr7_3:71686046-71686065 | Msa1121590:intron | 40.0% | |
| AAGCATAACGCAGAACAATG+GGG | - | chr7_3:71686384-71686403 | None:intergenic | 40.0% | |
| GCTGAGTAAAACTTCTACTG+AGG | + | chr7_3:71686757-71686776 | Msa1121590:CDS | 40.0% | |
| GACATTCGCATGATAGTTGA+AGG | + | chr7_3:71686782-71686801 | Msa1121590:CDS | 40.0% | |
| GCAAGGTAATTGAACATGTC+AGG | - | chr7_3:71686857-71686876 | None:intergenic | 40.0% | |
| !! | TTACTCGGTGTTGCTATCAA+TGG | + | chr7_3:71687109-71687128 | Msa1121590:intron | 40.0% |
| TATTTGCACGATGTTGACGT+TGG | + | chr7_3:71687490-71687509 | Msa1121590:intron | 40.0% | |
| TCCTAGAACAATTAGGCAGT+CGG | - | chr7_3:71687668-71687687 | None:intergenic | 40.0% | |
| ACAAGTTCAAAGTTGTCCCA+AGG | + | chr7_3:71687689-71687708 | Msa1121590:CDS | 40.0% | |
| ! | ATCAGTTTTTGCCTCACCTT+GGG | - | chr7_3:71687708-71687727 | None:intergenic | 40.0% |
| ATGAGAAATGTTGCGAACAG+AGG | + | chr7_3:71687726-71687745 | Msa1121590:CDS | 40.0% | |
| ACAACAAAAGAAGCAAGCAG+AGG | + | chr7_3:71687751-71687770 | Msa1121590:CDS | 40.0% | |
| AGGAAGCAGAAAAAGATCAG+CGG | + | chr7_3:71687771-71687790 | Msa1121590:CDS | 40.0% | |
| GCTTAACAAATCATCTGCAG+TGG | - | chr7_3:71687927-71687946 | None:intergenic | 40.0% | |
| CCATGCTTAAGAGGGTAAAA+CGG | - | chr7_3:71688049-71688068 | None:intergenic | 40.0% | |
| ! | CGTTTTACCCTCTTAAGCAT+GGG | + | chr7_3:71688047-71688066 | Msa1121590:intron | 40.0% |
| !!! | ACAGTGCACAAGATTGGTTT+TGG | - | chr7_3:71688077-71688096 | None:intergenic | 40.0% |
| ! | CCTACTCAGGAGTTTTTATG+TGG | - | chr7_3:71688498-71688517 | None:intergenic | 40.0% |
| CCACATAAAAACTCCTGAGT+AGG | + | chr7_3:71688495-71688514 | Msa1121590:intron | 40.0% | |
| GAGAAAGGTAAAACCTACTC+AGG | - | chr7_3:71688511-71688530 | None:intergenic | 40.0% | |
| CAACACGAGATGAAAGAGAA+AGG | - | chr7_3:71688526-71688545 | None:intergenic | 40.0% | |
| GCAGGTCACACTTTCATTTA+TGG | + | chr7_3:71688576-71688595 | Msa1121590:intron | 40.0% | |
| GCTCAAACAGAAAACAGAGA+TGG | + | chr7_3:71688621-71688640 | Msa1121590:CDS | 40.0% | |
| GCAATTCATGAGGATGAGTT+AGG | + | chr7_3:71688707-71688726 | Msa1121590:CDS | 40.0% | |
| ! | TAATCGGTCTGCATCCTTTT+CGG | - | chr7_3:71688735-71688754 | None:intergenic | 40.0% |
| CTGGACTACTTTCTCCTAAT+CGG | - | chr7_3:71688751-71688770 | None:intergenic | 40.0% | |
| TTAGGAGAAAGTAGTCCAGA+TGG | + | chr7_3:71688752-71688771 | Msa1121590:CDS | 40.0% | |
| GTACTTCTTGGCATCAAGAT+GGG | - | chr7_3:71688807-71688826 | None:intergenic | 40.0% | |
| AGTACTTCTTGGCATCAAGA+TGG | - | chr7_3:71688808-71688827 | None:intergenic | 40.0% | |
| !! | AAACCATAAAAGGCTGGTCT+AGG | - | chr7_3:71688866-71688885 | None:intergenic | 40.0% |
| ! | GACCAGCCTTTTATGGTTTT+TGG | + | chr7_3:71688867-71688886 | Msa1121590:CDS | 40.0% |
| AACGGGCCAAAAACCATAAA+AGG | - | chr7_3:71688876-71688895 | None:intergenic | 40.0% | |
| !!! | ATGGTTTTTGGCCCGTTAAA+AGG | + | chr7_3:71688879-71688898 | Msa1121590:CDS | 40.0% |
| CTGACAACATAATCAACGCT+TGG | - | chr7_3:71689216-71689235 | None:intergenic | 40.0% | |
| CAATCTGAAAGACTTTCACC+AGG | - | chr7_3:71689352-71689371 | None:intergenic | 40.0% | |
| AGATGAAGAGGAATGTCAAG+AGG | + | chr7_3:71689390-71689409 | Msa1121590:CDS | 40.0% | |
| GAGGAAGGTTCAAAATCTGA+TGG | + | chr7_3:71689409-71689428 | Msa1121590:CDS | 40.0% | |
| TCTGATGGAGAAAGTGAAGA+TGG | + | chr7_3:71689424-71689443 | Msa1121590:CDS | 40.0% | |
| ! | GATGGATTCTTTGTACCAGA+TGG | + | chr7_3:71689442-71689461 | Msa1121590:CDS | 40.0% |
| GCCAAGAAATTTCAGAGTCT+TGG | + | chr7_3:71689705-71689724 | Msa1121590:intron | 40.0% | |
| !! | GTTTTTGAATGGGTTTGGGA+GGG | - | chr7_3:71689764-71689783 | None:intergenic | 40.0% |
| !! | AGTTTTTGAATGGGTTTGGG+AGG | - | chr7_3:71689765-71689784 | None:intergenic | 40.0% |
| !!! | CACACCTCAGCTTTTTTCAT+TGG | - | chr7_3:71689967-71689986 | None:intergenic | 40.0% |
| ! | TTTTATGCAGGGTGCACAAT+TGG | + | chr7_3:71690095-71690114 | Msa1121590:intron | 40.0% |
| TGATAGCTCATCTTGCTCAA+AGG | + | chr7_3:71690152-71690171 | Msa1121590:CDS | 40.0% | |
| AAAGGATGACATAGAGACTG+AGG | + | chr7_3:71690170-71690189 | Msa1121590:CDS | 40.0% | |
| TATTAACGGAACTCCTAAGC+AGG | + | chr7_3:71690320-71690339 | Msa1121590:CDS | 40.0% | |
| AGAATGTACACAATTCCTGG+TGG | + | chr7_3:71690366-71690385 | Msa1121590:CDS | 40.0% | |
| ATTATAGGCAGATCTGTGTC+TGG | - | chr7_3:71690504-71690523 | None:intergenic | 40.0% | |
| CTGAGAACAATTCTGGATAG+TGG | - | chr7_3:71690683-71690702 | None:intergenic | 40.0% | |
| CACTATCCAGAATTGTTCTC+AGG | + | chr7_3:71690681-71690700 | Msa1121590:CDS | 40.0% | |
| TTATGCCCTGAGAACAATTC+TGG | - | chr7_3:71690690-71690709 | None:intergenic | 40.0% | |
| TGGCCAGATACAAATGTCAA+GGG | + | chr7_3:71690886-71690905 | Msa1121590:intron | 40.0% | |
| AGTCCCTTGACATTTGTATC+TGG | - | chr7_3:71690892-71690911 | None:intergenic | 40.0% | |
| TAACGGGAACACAATGGTAT+AGG | + | chr7_3:71690917-71690936 | Msa1121590:intron | 40.0% | |
| CAACCAACCATAGCTGTAAA+AGG | - | chr7_3:71690964-71690983 | None:intergenic | 40.0% | |
| ! | CTATGGTTGGTTGTGATTCT+GGG | + | chr7_3:71690971-71690990 | Msa1121590:intron | 40.0% |
| TGACCTGCAATAAACTTGTG+TGG | + | chr7_3:71691097-71691116 | Msa1121590:intron | 40.0% | |
| TGACCACACAAGTTTATTGC+AGG | - | chr7_3:71691103-71691122 | None:intergenic | 40.0% | |
| ! | TGGAGAGACATATTCAGGTT+AGG | - | chr7_3:71691161-71691180 | None:intergenic | 40.0% |
| !! | ACAGCATTGGTGCAAGATTT+GGG | - | chr7_3:71691202-71691221 | None:intergenic | 40.0% |
| !! | TACAGCATTGGTGCAAGATT+TGG | - | chr7_3:71691203-71691222 | None:intergenic | 40.0% |
| ! | GAATTTTCAGAGAAGAGCAG+TGG | + | chr7_3:71691404-71691423 | Msa1121590:intron | 40.0% |
| ! | ATTTTCAGAGAAGAGCAGTG+GGG | + | chr7_3:71691406-71691425 | Msa1121590:intron | 40.0% |
| GCAGAATATGACTTCGAAGA+TGG | - | chr7_3:71691518-71691537 | None:intergenic | 40.0% | |
| TGGGGATATGTACCAATGTA+AGG | + | chr7_3:71691655-71691674 | Msa1121590:three_prime_UTR | 40.0% | |
| !! | TGGAGGCAACAAAAGCACTT+GGG | + | chr7_3:71684970-71684989 | Msa1121590:five_prime_UTR | 45.0% |
| ATAAAAACCCTAATCGGCGG+TGG | - | chr7_3:71685084-71685103 | None:intergenic | 45.0% | |
| !! | GATTTGAGACGATTTGGTGC+TGG | - | chr7_3:71685200-71685219 | None:intergenic | 45.0% |
| ! | GGGTTGGATTTGAGACGATT+TGG | - | chr7_3:71685206-71685225 | None:intergenic | 45.0% |
| ACCCTAGAAAAAGAGCTCGA+AGG | + | chr7_3:71685287-71685306 | Msa1121590:CDS | 45.0% | |
| ! | CCCTTCGAGCTCTTTTTCTA+GGG | - | chr7_3:71685291-71685310 | None:intergenic | 45.0% |
| CCCTAGAAAAAGAGCTCGAA+GGG | + | chr7_3:71685288-71685307 | Msa1121590:CDS | 45.0% | |
| ! | ACCCTTCGAGCTCTTTTTCT+AGG | - | chr7_3:71685292-71685311 | None:intergenic | 45.0% |
| ATTGACCTTAAGCAATGCGG+AGG | + | chr7_3:71685353-71685372 | Msa1121590:CDS | 45.0% | |
| CTGAATTGTGAAGTGGCGAA+TGG | + | chr7_3:71685458-71685477 | Msa1121590:CDS | 45.0% | |
| GAATTGTGAAGTGGCGAATG+GGG | + | chr7_3:71685460-71685479 | Msa1121590:CDS | 45.0% | |
| AATTGTGAAGTGGCGAATGG+GGG | + | chr7_3:71685461-71685480 | Msa1121590:CDS | 45.0% | |
| GGAAGGGGTTAATTCAGCTT+TGG | + | chr7_3:71685496-71685515 | Msa1121590:CDS | 45.0% | |
| !! | TTCATGTCTTTGGTGTTGGG+AGG | + | chr7_3:71685604-71685623 | Msa1121590:CDS | 45.0% |
| TTGTTGCCGAAATCTGTTCG+AGG | + | chr7_3:71685862-71685881 | Msa1121590:CDS | 45.0% | |
| AGCTCTCCTCGAACAGATTT+CGG | - | chr7_3:71685871-71685890 | None:intergenic | 45.0% | |
| AAAGATCCACGACAGGATCA+TGG | + | chr7_3:71685915-71685934 | Msa1121590:CDS | 45.0% | |
| GATCATGGCTGTATCTGGTA+TGG | + | chr7_3:71685930-71685949 | Msa1121590:intron | 45.0% | |
| ! | GGTGCTTTGAATGCTGTTAG+TGG | + | chr7_3:71685976-71685995 | Msa1121590:intron | 45.0% |
| TTGCGACATTGCAACTCTGT+AGG | + | chr7_3:71686433-71686452 | Msa1121590:intron | 45.0% | |
| GTGACGCAATCATTTCTGCA+AGG | - | chr7_3:71686679-71686698 | None:intergenic | 45.0% | |
| CTAGAACAATTAGGCAGTCG+GGG | - | chr7_3:71687666-71687685 | None:intergenic | 45.0% | |
| CCTAGAACAATTAGGCAGTC+GGG | - | chr7_3:71687667-71687686 | None:intergenic | 45.0% | |
| TTCAAAGTTGTCCCAAGGTG+AGG | + | chr7_3:71687694-71687713 | Msa1121590:CDS | 45.0% | |
| ! | CATCAGTTTTTGCCTCACCT+TGG | - | chr7_3:71687709-71687728 | None:intergenic | 45.0% |
| ! | ACTTTGTCGCTCTGAACAGA+GGG | - | chr7_3:71687893-71687912 | None:intergenic | 45.0% |
| ! | AACTTTGTCGCTCTGAACAG+AGG | - | chr7_3:71687894-71687913 | None:intergenic | 45.0% |
| ACTTACTTGCGAAGATCCTC+AGG | - | chr7_3:71688025-71688044 | None:intergenic | 45.0% | |
| ! | CCGTTTTACCCTCTTAAGCA+TGG | + | chr7_3:71688046-71688065 | Msa1121590:intron | 45.0% |
| GAAAAGGATGCAGACCGATT+AGG | + | chr7_3:71688734-71688753 | Msa1121590:CDS | 45.0% | |
| !! | GATGCCAAGAAGTACTATCG+AGG | + | chr7_3:71688812-71688831 | Msa1121590:CDS | 45.0% |
| CCTTCCTCGATAGTACTTCT+TGG | - | chr7_3:71688819-71688838 | None:intergenic | 45.0% | |
| !! | CCAAGAAGTACTATCGAGGA+AGG | + | chr7_3:71688816-71688835 | Msa1121590:CDS | 45.0% |
| ! | ACTCCTAGACCAGCCTTTTA+TGG | + | chr7_3:71688860-71688879 | Msa1121590:CDS | 45.0% |
| GGCCAAAAACCATAAAAGGC+TGG | - | chr7_3:71688872-71688891 | None:intergenic | 45.0% | |
| ! | CACTACTTCTAAAGGTTCCC+TGG | + | chr7_3:71689025-71689044 | Msa1121590:intron | 45.0% |
| TTGGAGGACGTCATCCATTA+AGG | + | chr7_3:71689184-71689203 | Msa1121590:CDS | 45.0% | |
| AGGACGTCATCCATTAAGGA+AGG | + | chr7_3:71689188-71689207 | Msa1121590:CDS | 45.0% | |
| ACGCTTGGATCCTTCCTTAA+TGG | - | chr7_3:71689201-71689220 | None:intergenic | 45.0% | |
| TTATGTTGTCAGCAGCGATG+AGG | + | chr7_3:71689224-71689243 | Msa1121590:CDS | 45.0% | |
| GAAGAGGAATGTCAAGAGGA+AGG | + | chr7_3:71689394-71689413 | Msa1121590:CDS | 45.0% | |
| TCATCTGAGAGATACCCATC+TGG | - | chr7_3:71689460-71689479 | None:intergenic | 45.0% | |
| TGGGTATCTCTCAGATGATG+AGG | + | chr7_3:71689462-71689481 | Msa1121590:CDS | 45.0% | |
| TCTCTCAGATGATGAGGTAG+AGG | + | chr7_3:71689468-71689487 | Msa1121590:intron | 45.0% | |
| ATGGCAGTTAAGGGCTGTTA+CGG | - | chr7_3:71689859-71689878 | None:intergenic | 45.0% | |
| GAAAAAAGCTGAGGTGTGTG+CGG | + | chr7_3:71689969-71689988 | Msa1121590:intron | 45.0% | |
| ! | ATGGTTGGTACAAGTGCTCA+AGG | - | chr7_3:71690020-71690039 | None:intergenic | 45.0% |
| TGAGCACTTGTACCAACCAT+TGG | + | chr7_3:71690020-71690039 | Msa1121590:intron | 45.0% | |
| GACCGAATGGAAACAGATGT+TGG | + | chr7_3:71690117-71690136 | Msa1121590:CDS | 45.0% | |
| GGCCAACATCTGTTTCCATT+CGG | - | chr7_3:71690122-71690141 | None:intergenic | 45.0% | |
| ATGAGCTATCAACCTCCTCA+AGG | - | chr7_3:71690143-71690162 | None:intergenic | 45.0% | |
| GTGGCCAGATACAAATGTCA+AGG | + | chr7_3:71690885-71690904 | Msa1121590:intron | 45.0% | |
| CAATGGTATAGGTGTCTGCA+TGG | + | chr7_3:71690928-71690947 | Msa1121590:intron | 45.0% | |
| ! | GCTATGGTTGGTTGTGATTC+TGG | + | chr7_3:71690970-71690989 | Msa1121590:intron | 45.0% |
| ACTTAACCTGAACTGGTCCT+CGG | + | chr7_3:71691047-71691066 | Msa1121590:intron | 45.0% | |
| TTACTCATGATAACCCACCG+AGG | - | chr7_3:71691067-71691086 | None:intergenic | 45.0% | |
| ! | CTTGGCTTGACAGTTAAACC+TGG | + | chr7_3:71691303-71691322 | Msa1121590:CDS | 45.0% |
| ! | TTTTCAGAGAAGAGCAGTGG+GGG | + | chr7_3:71691407-71691426 | Msa1121590:intron | 45.0% |
| !! | TCTAAAAGGTGCTTACCACC+TGG | + | chr7_3:71691455-71691474 | Msa1121590:CDS | 45.0% |
| TATGACTTCGAAGATGGCTG+TGG | - | chr7_3:71691512-71691531 | None:intergenic | 45.0% | |
| ATCTGCTGTCTTGTGGATCA+TGG | - | chr7_3:71691544-71691563 | None:intergenic | 45.0% | |
| TCATGTGATCTGCTGTCTTG+TGG | - | chr7_3:71691551-71691570 | None:intergenic | 45.0% | |
| !!! | TTCATTTTAAAAATTATTTT+TGG | - | chr7_3:71688114-71688133 | None:intergenic | 5.0% |
| !!! | TAATTTTTAAAATGAAAAAT+TGG | + | chr7_3:71688118-71688137 | Msa1121590:intron | 5.0% |
| !! | GTGGAGGCAACAAAAGCACT+TGG | + | chr7_3:71684969-71684988 | Msa1121590:five_prime_UTR | 50.0% |
| CCTAATCGGCGGTGGAATAA+GGG | - | chr7_3:71685076-71685095 | None:intergenic | 50.0% | |
| ! | CCTTATTCCACCGCCGATTA+GGG | + | chr7_3:71685074-71685093 | Msa1121590:five_prime_UTR | 50.0% |
| !! | TTTGGTGCTGGATCTTGAGG+TGG | - | chr7_3:71685188-71685207 | None:intergenic | 50.0% |
| !! | CGATTTGGTGCTGGATCTTG+AGG | - | chr7_3:71685191-71685210 | None:intergenic | 50.0% |
| TCGAACCTCCGCATTGCTTA+AGG | - | chr7_3:71685361-71685380 | None:intergenic | 50.0% | |
| TTCGAGAAACGTGGTGGTTG+CGG | + | chr7_3:71685376-71685395 | Msa1121590:CDS | 50.0% | |
| ATTGTGAAGTGGCGAATGGG+GGG | + | chr7_3:71685462-71685481 | Msa1121590:CDS | 50.0% | |
| GTCGGAAAAAGATCCACGAC+AGG | + | chr7_3:71685908-71685927 | Msa1121590:CDS | 50.0% | |
| ATACAGCCATGATCCTGTCG+TGG | - | chr7_3:71685924-71685943 | None:intergenic | 50.0% | |
| GACAGGATCATGGCTGTATC+TGG | + | chr7_3:71685925-71685944 | Msa1121590:CDS | 50.0% | |
| AGCGTATCGCCAAACAGTAG+CGG | + | chr7_3:71686293-71686312 | Msa1121590:intron | 50.0% | |
| GCACGATGTTGACGTTGGAT+TGG | + | chr7_3:71687495-71687514 | Msa1121590:intron | 50.0% | |
| CAATTAGGCAGTCGGGGAAA+AGG | - | chr7_3:71687660-71687679 | None:intergenic | 50.0% | |
| CCCGACTGCCTAATTGTTCT+AGG | + | chr7_3:71687664-71687683 | Msa1121590:intron | 50.0% | |
| ! | TCGCTCTGAACAGAGGGATT+AGG | - | chr7_3:71687887-71687906 | None:intergenic | 50.0% |
| ! | TGGAGCACCCATGCTTAAGA+GGG | - | chr7_3:71688057-71688076 | None:intergenic | 50.0% |
| ! | TTGGAGCACCCATGCTTAAG+AGG | - | chr7_3:71688058-71688077 | None:intergenic | 50.0% |
| !! | GGATGAGTTAGGCACCGAAA+AGG | + | chr7_3:71688718-71688737 | Msa1121590:CDS | 50.0% |
| TTGTCAGCAGCGATGAGGAA+TGG | + | chr7_3:71689229-71689248 | Msa1121590:CDS | 50.0% | |
| TGTCAGCAGCGATGAGGAAT+GGG | + | chr7_3:71689230-71689249 | Msa1121590:CDS | 50.0% | |
| TGGCAGTTAAGGGCTGTTAC+GGG | - | chr7_3:71689858-71689877 | None:intergenic | 50.0% | |
| !! | GGAAACAGATGTTGGCCTTG+AGG | + | chr7_3:71690125-71690144 | Msa1121590:CDS | 50.0% |
| !! | AACAGATGTTGGCCTTGAGG+AGG | + | chr7_3:71690128-71690147 | Msa1121590:CDS | 50.0% |
| AAGCACATCTGCTCCTGCTT+AGG | - | chr7_3:71690336-71690355 | None:intergenic | 50.0% | |
| AGGCAGATCTGTGTCTGGTA+TGG | - | chr7_3:71690499-71690518 | None:intergenic | 50.0% | |
| AATCAACCTGTCGCAGGCAA+GGG | - | chr7_3:71690549-71690568 | None:intergenic | 50.0% | |
| AAATCAACCTGTCGCAGGCA+AGG | - | chr7_3:71690550-71690569 | None:intergenic | 50.0% | |
| !! | TTGCCTGCGACAGGTTGATT+TGG | + | chr7_3:71690549-71690568 | Msa1121590:intron | 50.0% |
| CGGACTATGTCGATAACCGA+TGG | + | chr7_3:71690788-71690807 | Msa1121590:CDS | 50.0% | |
| CTATGTCGATAACCGATGGC+AGG | + | chr7_3:71690792-71690811 | Msa1121590:CDS | 50.0% | |
| TAACCGATGGCAGGTTTGTG+AGG | + | chr7_3:71690801-71690820 | Msa1121590:intron | 50.0% | |
| AACCGATGGCAGGTTTGTGA+GGG | + | chr7_3:71690802-71690821 | Msa1121590:intron | 50.0% | |
| TTTCAGAGAAGAGCAGTGGG+GGG | + | chr7_3:71691408-71691427 | Msa1121590:intron | 50.0% | |
| !! | AAAAGGTGCTTACCACCTGG+AGG | + | chr7_3:71691458-71691477 | Msa1121590:CDS | 50.0% |
| TTACCACCTGGAGGTGAAAG+CGG | + | chr7_3:71691467-71691486 | Msa1121590:CDS | 50.0% | |
| GCTGTCTTGTGGATCATGGA+TGG | - | chr7_3:71691540-71691559 | None:intergenic | 50.0% | |
| ! | TTAGAGATGGTGGTTGCGCT+TGG | + | chr7_3:71691635-71691654 | Msa1121590:three_prime_UTR | 50.0% |
| ! | TAGAGATGGTGGTTGCGCTT+GGG | + | chr7_3:71691636-71691655 | Msa1121590:three_prime_UTR | 50.0% |
| ! | CCCTTATTCCACCGCCGATT+AGG | + | chr7_3:71685073-71685092 | Msa1121590:five_prime_UTR | 55.0% |
| CCCTAATCGGCGGTGGAATA+AGG | - | chr7_3:71685077-71685096 | None:intergenic | 55.0% | |
| !! | GGTGTCGATTTGCATGGTGG+TGG | - | chr7_3:71685129-71685148 | None:intergenic | 55.0% |
| !! | GGTGGTGTCGATTTGCATGG+TGG | - | chr7_3:71685132-71685151 | None:intergenic | 55.0% |
| !! | GACGGTGGTGTCGATTTGCA+TGG | - | chr7_3:71685135-71685154 | None:intergenic | 55.0% |
| ! | TGGTGGAGGAGTGGTTTGGA+CGG | - | chr7_3:71685153-71685172 | None:intergenic | 55.0% |
| ! | GTTGTGGTGGAGGAGTGGTT+TGG | - | chr7_3:71685157-71685176 | None:intergenic | 55.0% |
| ATGCGGAGGTTCGAGAAACG+TGG | + | chr7_3:71685367-71685386 | Msa1121590:CDS | 55.0% | |
| GAATGGGGGGATTGTGTTGG+CGG | + | chr7_3:71685475-71685494 | Msa1121590:CDS | 55.0% | |
| !! | GTGTGTTGTTTGCTGGGCAG+AGG | + | chr7_3:71685528-71685547 | Msa1121590:CDS | 55.0% |
| GCTGGGCAGAGGATGATGTA+CGG | + | chr7_3:71685539-71685558 | Msa1121590:CDS | 55.0% | |
| CAGCGATGAGGAATGGGAAG+AGG | + | chr7_3:71689236-71689255 | Msa1121590:CDS | 55.0% | |
| GGGTGCACAATTGGACCGAA+TGG | + | chr7_3:71690104-71690123 | Msa1121590:intron | 55.0% | |
| CAGTAGAGGGAGAGGCTTCT+TGG | - | chr7_3:71690440-71690459 | None:intergenic | 55.0% | |
| CAAGAAGCCTCTCCCTCTAC+TGG | + | chr7_3:71690438-71690457 | Msa1121590:CDS | 55.0% | |
| ACCTTTGCCAGTAGAGGGAG+AGG | - | chr7_3:71690448-71690467 | None:intergenic | 55.0% | |
| GCAGCACCTTTGCCAGTAGA+GGG | - | chr7_3:71690453-71690472 | None:intergenic | 55.0% | |
| AGCAGCACCTTTGCCAGTAG+AGG | - | chr7_3:71690454-71690473 | None:intergenic | 55.0% | |
| TGCTACTCCACTGCCTGATC+TGG | + | chr7_3:71690470-71690489 | Msa1121590:CDS | 55.0% | |
| TCTGGTATGGCAGCCAGATC+AGG | - | chr7_3:71690486-71690505 | None:intergenic | 55.0% | |
| CTGCCAAATCAACCTGTCGC+AGG | - | chr7_3:71690555-71690574 | None:intergenic | 55.0% | |
| CACCCTCACAAACCTGCCAT+CGG | - | chr7_3:71690807-71690826 | None:intergenic | 55.0% | |
| TAACCTGAACTGGTCCTCGG+TGG | + | chr7_3:71691050-71691069 | Msa1121590:intron | 55.0% | |
| AACCTGAACTGGTCCTCGGT+GGG | + | chr7_3:71691051-71691070 | Msa1121590:intron | 55.0% | |
| TACCACCTGGAGGTGAAAGC+GGG | + | chr7_3:71691468-71691487 | Msa1121590:CDS | 55.0% | |
| ! | GGCTGTGGTGATGTTTCACC+AGG | - | chr7_3:71691497-71691516 | None:intergenic | 55.0% |
| ! | AGAGATGGTGGTTGCGCTTG+GGG | + | chr7_3:71691637-71691656 | Msa1121590:three_prime_UTR | 55.0% |
| ! | TGGAGGAGTGGTTTGGACGG+TGG | - | chr7_3:71685150-71685169 | None:intergenic | 60.0% |
| ! | GCTGGATCTTGAGGTGGTGG+CGG | - | chr7_3:71685182-71685201 | None:intergenic | 60.0% |
| ! | GGTGCTGGATCTTGAGGTGG+TGG | - | chr7_3:71685185-71685204 | None:intergenic | 60.0% |
| CGGAGGTTCGAGAAACGTGG+TGG | + | chr7_3:71685370-71685389 | Msa1121590:CDS | 60.0% | |
| GGCGAATGGGGGGATTGTGT+TGG | + | chr7_3:71685472-71685491 | Msa1121590:CDS | 60.0% | |
| ! | GGGGGATTGTGTTGGCGGAA+GGG | + | chr7_3:71685480-71685499 | Msa1121590:CDS | 60.0% |
| ! | GGGGATTGTGTTGGCGGAAG+GGG | + | chr7_3:71685481-71685500 | Msa1121590:CDS | 60.0% |
| GCCTCTCCCTCTACTGGCAA+AGG | + | chr7_3:71690444-71690463 | Msa1121590:CDS | 60.0% | |
| ATGGCAGCCAGATCAGGCAG+TGG | - | chr7_3:71690480-71690499 | None:intergenic | 60.0% | |
| CGATGGCAGGTTTGTGAGGG+TGG | + | chr7_3:71690805-71690824 | Msa1121590:intron | 60.0% | |
| AACCCACCGAGGACCAGTTC+AGG | - | chr7_3:71691056-71691075 | None:intergenic | 60.0% | |
| TTCCCGCTTTCACCTCCAGG+TGG | - | chr7_3:71691473-71691492 | None:intergenic | 60.0% | |
| GGTTTCCCGCTTTCACCTCC+AGG | - | chr7_3:71691476-71691495 | None:intergenic | 60.0% | |
| GGAGGTGAAAGCGGGAAACC+TGG | + | chr7_3:71691476-71691495 | Msa1121590:CDS | 60.0% | |
| ! | CGGTGGTTGTGGTGGAGGAG+TGG | - | chr7_3:71685162-71685181 | None:intergenic | 65.0% |
| !! | TGAGGTGGTGGCGGTGGTTG+TGG | - | chr7_3:71685173-71685192 | None:intergenic | 65.0% |
| !! | GGATCTTGAGGTGGTGGCGG+TGG | - | chr7_3:71685179-71685198 | None:intergenic | 65.0% |
| ! | CGTGGTGGTTGCGGCGTTGA+TGG | + | chr7_3:71685385-71685404 | Msa1121590:CDS | 65.0% |
| !! | GGTGGTTGCGGCGTTGATGG+AGG | + | chr7_3:71685388-71685407 | Msa1121590:CDS | 65.0% |
| ! | GGGGGGATTGTGTTGGCGGA+AGG | + | chr7_3:71685479-71685498 | Msa1121590:CDS | 65.0% |
| ! | GGTGGCGGTGGTTGTGGTGG+AGG | - | chr7_3:71685167-71685186 | None:intergenic | 70.0% |
| !! | GGTGGTGGCGGTGGTTGTGG+TGG | - | chr7_3:71685170-71685189 | None:intergenic | 70.0% |
| GCACGGCCCTTGCCTGCGAC+AGG | + | chr7_3:71690540-71690559 | Msa1121590:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 71684950 | 71691752 | 71684950 | ID=Msa1121590;Name=Msa1121590 |
| chr7_3 | mRNA | 71684950 | 71691752 | 71684950 | ID=Msa1121590-mRNA-1;Parent=Msa1121590;Name=Msa1121590-mRNA-1;_AED=0.07;_eAED=0.07;_QI=184|1|1|1|1|1|12|175|846 |
| chr7_3 | exon | 71684950 | 71685625 | 71684950 | ID=Msa1121590-mRNA-1:exon:18411;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71685847 | 71685946 | 71685847 | ID=Msa1121590-mRNA-1:exon:18412;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71686684 | 71686831 | 71686684 | ID=Msa1121590-mRNA-1:exon:18413;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71686923 | 71687058 | 71686923 | ID=Msa1121590-mRNA-1:exon:18414;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71687686 | 71688038 | 71687686 | ID=Msa1121590-mRNA-1:exon:18415;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71688580 | 71688900 | 71688580 | ID=Msa1121590-mRNA-1:exon:18416;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71689176 | 71689257 | 71689176 | ID=Msa1121590-mRNA-1:exon:18417;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71689343 | 71689483 | 71689343 | ID=Msa1121590-mRNA-1:exon:18418;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71690105 | 71690524 | 71690105 | ID=Msa1121590-mRNA-1:exon:18419;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71690676 | 71690813 | 71690676 | ID=Msa1121590-mRNA-1:exon:18420;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71691279 | 71691324 | 71691279 | ID=Msa1121590-mRNA-1:exon:18421;Parent=Msa1121590-mRNA-1 |
| chr7_3 | exon | 71691414 | 71691752 | 71691414 | ID=Msa1121590-mRNA-1:exon:18422;Parent=Msa1121590-mRNA-1 |
| chr7_3 | five_prime_UTR | 71684950 | 71685133 | 71684950 | ID=Msa1121590-mRNA-1:five_prime_utr;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71685134 | 71685625 | 71685134 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71685847 | 71685946 | 71685847 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71686684 | 71686831 | 71686684 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71686923 | 71687058 | 71686923 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71687686 | 71688038 | 71687686 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71688580 | 71688900 | 71688580 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71689176 | 71689257 | 71689176 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71689343 | 71689483 | 71689343 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71690105 | 71690524 | 71690105 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71690676 | 71690813 | 71690676 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71691279 | 71691324 | 71691279 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | CDS | 71691414 | 71691577 | 71691414 | ID=Msa1121590-mRNA-1:cds;Parent=Msa1121590-mRNA-1 |
| chr7_3 | three_prime_UTR | 71691578 | 71691752 | 71691578 | ID=Msa1121590-mRNA-1:three_prime_utr;Parent=Msa1121590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
