Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1364430 | XP_003624216.1 | 96.459 | 593 | 19 | 1 | 1 | 591 | 1 | 593 | 0.0 | 1158 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1364430 | sp|Q9SXY0|FAS1_ARATH | 47.569 | 576 | 268 | 11 | 28 | 591 | 21 | 574 | 4.88e-137 | 421 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1364430 | G7KSE5 | 96.459 | 593 | 19 | 1 | 1 | 591 | 1 | 593 | 0.0 | 1158 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000880 | Msa1364430 | 0.819039 | 1.431894e-52 | -8.615850e-47 |
Msa0002560 | Msa1364430 | 0.837451 | 5.159028e-57 | -8.615850e-47 |
Msa0002680 | Msa1364430 | 0.804041 | 2.612898e-49 | -8.615850e-47 |
Msa0003220 | Msa1364430 | 0.838643 | 2.545177e-57 | -8.615850e-47 |
Msa0003270 | Msa1364430 | 0.801622 | 8.256240e-49 | -8.615850e-47 |
Msa0007970 | Msa1364430 | 0.802576 | 5.254273e-49 | -8.615850e-47 |
Msa0010770 | Msa1364430 | 0.827292 | 1.695801e-54 | -8.615850e-47 |
Msa0012940 | Msa1364430 | 0.834677 | 2.609546e-56 | -8.615850e-47 |
Msa0015120 | Msa1364430 | 0.803595 | 3.233870e-49 | -8.615850e-47 |
Msa0022550 | Msa1364430 | 0.816541 | 5.242735e-52 | -8.615850e-47 |
Msa0022750 | Msa1364430 | -0.811850 | 5.696689e-51 | -8.615850e-47 |
Msa0027390 | Msa1364430 | 0.807374 | 5.216040e-50 | -8.615850e-47 |
Msa0031180 | Msa1364430 | 0.834773 | 2.468795e-56 | -8.615850e-47 |
Msa0035120 | Msa1364430 | 0.835632 | 1.498997e-56 | -8.615850e-47 |
Msa0037120 | Msa1364430 | 0.807231 | 5.591193e-50 | -8.615850e-47 |
Msa0039250 | Msa1364430 | 0.822689 | 2.071229e-53 | -8.615850e-47 |
Msa0043500 | Msa1364430 | 0.815092 | 1.103773e-51 | -8.615850e-47 |
Msa0043650 | Msa1364430 | 0.803091 | 4.112156e-49 | -8.615850e-47 |
Msa0045340 | Msa1364430 | 0.836080 | 1.153843e-56 | -8.615850e-47 |
Msa0047640 | Msa1364430 | 0.817294 | 3.552484e-52 | -8.615850e-47 |
Msa0052870 | Msa1364430 | 0.818052 | 2.397474e-52 | -8.615850e-47 |
Msa0054530 | Msa1364430 | 0.834449 | 2.977856e-56 | -8.615850e-47 |
Msa0054820 | Msa1364430 | 0.868683 | 5.442772e-66 | -8.615850e-47 |
Msa0056450 | Msa1364430 | 0.829604 | 4.690086e-55 | -8.615850e-47 |
Msa0061340 | Msa1364430 | 0.827045 | 1.943003e-54 | -8.615850e-47 |
Msa0064110 | Msa1364430 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
Msa0064290 | Msa1364430 | 0.801783 | 7.650753e-49 | -8.615850e-47 |
Msa0064920 | Msa1364430 | 0.823016 | 1.737757e-53 | -8.615850e-47 |
Msa0065550 | Msa1364430 | 0.800379 | 1.481925e-48 | -8.615850e-47 |
Msa0078480 | Msa1364430 | 0.836559 | 8.716826e-57 | -8.615850e-47 |
Msa0082440 | Msa1364430 | 0.809353 | 1.972920e-50 | -8.615850e-47 |
Msa0084340 | Msa1364430 | 0.801020 | 1.096578e-48 | -8.615850e-47 |
Msa0089980 | Msa1364430 | 0.856026 | 4.247247e-62 | -8.615850e-47 |
Msa0090010 | Msa1364430 | 0.852394 | 4.750979e-61 | -8.615850e-47 |
Msa0091780 | Msa1364430 | 0.807790 | 4.254424e-50 | -8.615850e-47 |
Msa0092440 | Msa1364430 | 0.807476 | 4.962537e-50 | -8.615850e-47 |
Msa0094130 | Msa1364430 | 0.831619 | 1.506051e-55 | -8.615850e-47 |
Msa0096580 | Msa1364430 | 0.806942 | 6.439049e-50 | -8.615850e-47 |
Msa0100160 | Msa1364430 | 0.860902 | 1.494066e-63 | -8.615850e-47 |
Msa0102270 | Msa1364430 | 0.811960 | 5.389784e-51 | -8.615850e-47 |
Msa0103180 | Msa1364430 | 0.804129 | 2.504805e-49 | -8.615850e-47 |
Msa0106620 | Msa1364430 | 0.857086 | 2.074296e-62 | -8.615850e-47 |
Msa0106710 | Msa1364430 | 0.829656 | 4.556379e-55 | -8.615850e-47 |
Msa0115090 | Msa1364430 | 0.803252 | 3.808577e-49 | -8.615850e-47 |
Msa0115560 | Msa1364430 | 0.822442 | 2.364042e-53 | -8.615850e-47 |
Msa0116790 | Msa1364430 | 0.816199 | 6.255555e-52 | -8.615850e-47 |
Msa1345810 | Msa1364430 | 0.812948 | 3.278429e-51 | -8.615850e-47 |
Msa1346660 | Msa1364430 | 0.802149 | 6.432645e-49 | -8.615850e-47 |
Msa1346750 | Msa1364430 | 0.811520 | 6.720408e-51 | -8.615850e-47 |
Msa1356610 | Msa1364430 | 0.809517 | 1.819509e-50 | -8.615850e-47 |
Msa1359560 | Msa1364430 | 0.849730 | 2.679771e-60 | -8.615850e-47 |
Msa1364430 | Msa1369690 | 0.813495 | 2.487305e-51 | -8.615850e-47 |
Msa1364430 | Msa1373820 | 0.800604 | 1.333174e-48 | -8.615850e-47 |
Msa1364430 | Msa1374060 | 0.801740 | 7.806237e-49 | -8.615850e-47 |
Msa1364430 | Msa1383530 | 0.818004 | 2.457345e-52 | -8.615850e-47 |
Msa1364430 | Msa1393820 | 0.857916 | 1.178229e-62 | -8.615850e-47 |
Msa1364430 | Msa1402400 | 0.808377 | 3.190639e-50 | -8.615850e-47 |
Msa1364430 | Msa1403710 | 0.805598 | 1.235742e-49 | -8.615850e-47 |
Msa1364430 | Msa1409950 | 0.815587 | 8.565781e-52 | -8.615850e-47 |
Msa1364430 | Msa1418260 | 0.841496 | 4.586271e-58 | -8.615850e-47 |
Msa1364430 | Msa1420250 | 0.848458 | 6.050100e-60 | -8.615850e-47 |
Msa1364430 | Msa1424780 | 0.826169 | 3.144243e-54 | -8.615850e-47 |
Msa1364430 | Msa1438520 | 0.840206 | 9.995388e-58 | -8.615850e-47 |
Msa1364430 | Msa1439610 | 0.861590 | 9.221357e-64 | -8.615850e-47 |
Msa1364430 | Msa1440740 | 0.808814 | 2.573624e-50 | -8.615850e-47 |
Msa1364430 | Msa1443310 | 0.820871 | 5.454262e-53 | -8.615850e-47 |
Msa1364430 | Msa1446780 | 0.830103 | 3.545550e-55 | -8.615850e-47 |
Msa1364430 | Msa1448490 | 0.811894 | 5.572162e-51 | -8.615850e-47 |
Msa1364430 | Msa1450720 | 0.826831 | 2.186032e-54 | -8.615850e-47 |
Msa1364430 | Msa1461540 | 0.805979 | 1.027632e-49 | -8.615850e-47 |
Msa1364430 | Msa1462660 | 0.817875 | 2.628094e-52 | -8.615850e-47 |
Msa1364430 | Msa1463010 | 0.852356 | 4.872323e-61 | -8.615850e-47 |
Msa1364430 | Msa1463030 | 0.803381 | 3.581847e-49 | -8.615850e-47 |
Msa1364430 | Msa1466590 | 0.818788 | 1.632743e-52 | -8.615850e-47 |
Msa1364430 | Msa1467000 | 0.836678 | 8.129620e-57 | -8.615850e-47 |
Msa0607320 | Msa1364430 | 0.803603 | 3.222219e-49 | -8.615850e-47 |
Msa0618950 | Msa1364430 | 0.803221 | 3.865709e-49 | -8.615850e-47 |
Msa0619420 | Msa1364430 | 0.808615 | 2.838727e-50 | -8.615850e-47 |
Msa0620230 | Msa1364430 | 0.808348 | 3.236350e-50 | -8.615850e-47 |
Msa0626270 | Msa1364430 | 0.841876 | 3.640997e-58 | -8.615850e-47 |
Msa0626460 | Msa1364430 | 0.811617 | 6.402015e-51 | -8.615850e-47 |
Msa0628420 | Msa1364430 | 0.802249 | 6.136433e-49 | -8.615850e-47 |
Msa0629430 | Msa1364430 | 0.802060 | 6.710886e-49 | -8.615850e-47 |
Msa0641730 | Msa1364430 | 0.800329 | 1.516928e-48 | -8.615850e-47 |
Msa0642250 | Msa1364430 | 0.812282 | 4.586123e-51 | -8.615850e-47 |
Msa0647430 | Msa1364430 | 0.817670 | 2.924028e-52 | -8.615850e-47 |
Msa0652000 | Msa1364430 | 0.801402 | 9.156938e-49 | -8.615850e-47 |
Msa0652690 | Msa1364430 | 0.853520 | 2.263310e-61 | -8.615850e-47 |
Msa0658590 | Msa1364430 | 0.835851 | 1.319148e-56 | -8.615850e-47 |
Msa0659550 | Msa1364430 | 0.808052 | 3.742798e-50 | -8.615850e-47 |
Msa0661320 | Msa1364430 | 0.813951 | 1.973974e-51 | -8.615850e-47 |
Msa0664540 | Msa1364430 | 0.819119 | 1.372691e-52 | -8.615850e-47 |
Msa0669180 | Msa1364430 | 0.802531 | 5.367857e-49 | -8.615850e-47 |
Msa0674230 | Msa1364430 | 0.809997 | 1.434779e-50 | -8.615850e-47 |
Msa0679100 | Msa1364430 | 0.811920 | 5.500504e-51 | -8.615850e-47 |
Msa0687450 | Msa1364430 | 0.847525 | 1.094395e-59 | -8.615850e-47 |
Msa0689760 | Msa1364430 | 0.853516 | 2.268973e-61 | -8.615850e-47 |
Msa0698100 | Msa1364430 | 0.835567 | 1.556971e-56 | -8.615850e-47 |
Msa0702570 | Msa1364430 | 0.806065 | 9.856942e-50 | -8.615850e-47 |
Msa0703550 | Msa1364430 | 0.805626 | 1.218787e-49 | -8.615850e-47 |
Msa0705390 | Msa1364430 | 0.813289 | 2.759569e-51 | -8.615850e-47 |
Msa0710270 | Msa1364430 | 0.828711 | 7.721569e-55 | -8.615850e-47 |
Msa0713870 | Msa1364430 | 0.809869 | 1.529058e-50 | -8.615850e-47 |
Msa0716860 | Msa1364430 | 0.838535 | 2.714482e-57 | -8.615850e-47 |
Msa0749400 | Msa1364430 | 0.860623 | 1.815424e-63 | -8.615850e-47 |
Msa0751260 | Msa1364430 | 0.812575 | 3.957437e-51 | -8.615850e-47 |
Msa0756530 | Msa1364430 | 0.820516 | 6.583035e-53 | -8.615850e-47 |
Msa0757800 | Msa1364430 | 0.831221 | 1.887085e-55 | -8.615850e-47 |
Msa0766580 | Msa1364430 | 0.803154 | 3.990642e-49 | -8.615850e-47 |
Msa0767100 | Msa1364430 | 0.803981 | 2.689754e-49 | -8.615850e-47 |
Msa0788120 | Msa1364430 | 0.802899 | 4.507154e-49 | -8.615850e-47 |
Msa0800700 | Msa1364430 | 0.858424 | 8.315094e-63 | -8.615850e-47 |
Msa0832090 | Msa1364430 | 0.814239 | 1.705169e-51 | -8.615850e-47 |
Msa0837410 | Msa1364430 | 0.807201 | 5.674239e-50 | -8.615850e-47 |
Msa0123300 | Msa1364430 | 0.804884 | 1.743698e-49 | -8.615850e-47 |
Msa0124680 | Msa1364430 | 0.811204 | 7.870875e-51 | -8.615850e-47 |
Msa0126230 | Msa1364430 | 0.834160 | 3.520238e-56 | -8.615850e-47 |
Msa0127100 | Msa1364430 | 0.803168 | 3.964389e-49 | -8.615850e-47 |
Msa0131290 | Msa1364430 | 0.800712 | 1.267052e-48 | -8.615850e-47 |
Msa0133720 | Msa1364430 | 0.833198 | 6.121395e-56 | -8.615850e-47 |
Msa0133820 | Msa1364430 | 0.844628 | 6.719451e-59 | -8.615850e-47 |
Msa0138210 | Msa1364430 | 0.809603 | 1.744054e-50 | -8.615850e-47 |
Msa0138360 | Msa1364430 | 0.800304 | 1.534459e-48 | -8.615850e-47 |
Msa0138750 | Msa1364430 | 0.810589 | 1.069253e-50 | -8.615850e-47 |
Msa0141400 | Msa1364430 | 0.817813 | 2.713845e-52 | -8.615850e-47 |
Msa0143850 | Msa1364430 | 0.842808 | 2.061780e-58 | -8.615850e-47 |
Msa0144360 | Msa1364430 | 0.859698 | 3.455261e-63 | -8.615850e-47 |
Msa0144780 | Msa1364430 | 0.818010 | 2.450230e-52 | -8.615850e-47 |
Msa0146280 | Msa1364430 | 0.801460 | 8.909546e-49 | -8.615850e-47 |
Msa0147980 | Msa1364430 | 0.802096 | 6.595830e-49 | -8.615850e-47 |
Msa0152400 | Msa1364430 | 0.834599 | 2.730220e-56 | -8.615850e-47 |
Msa0160670 | Msa1364430 | 0.811506 | 6.765784e-51 | -8.615850e-47 |
Msa0167850 | Msa1364430 | 0.830354 | 3.079489e-55 | -8.615850e-47 |
Msa0168870 | Msa1364430 | 0.816852 | 4.465511e-52 | -8.615850e-47 |
Msa0176050 | Msa1364430 | 0.814605 | 1.414666e-51 | -8.615850e-47 |
Msa0181230 | Msa1364430 | 0.816968 | 4.205356e-52 | -8.615850e-47 |
Msa0183420 | Msa1364430 | 0.833074 | 6.570915e-56 | -8.615850e-47 |
Msa0187030 | Msa1364430 | 0.802901 | 4.501757e-49 | -8.615850e-47 |
Msa0187200 | Msa1364430 | 0.821035 | 4.999875e-53 | -8.615850e-47 |
Msa0188150 | Msa1364430 | 0.807269 | 5.488867e-50 | -8.615850e-47 |
Msa0197810 | Msa1364430 | 0.825642 | 4.193706e-54 | -8.615850e-47 |
Msa0218350 | Msa1364430 | 0.833064 | 6.608955e-56 | -8.615850e-47 |
Msa0220730 | Msa1364430 | 0.810403 | 1.173108e-50 | -8.615850e-47 |
Msa0225480 | Msa1364430 | 0.837949 | 3.842003e-57 | -8.615850e-47 |
Msa0225620 | Msa1364430 | 0.820884 | 5.417994e-53 | -8.615850e-47 |
Msa0225670 | Msa1364430 | 0.830628 | 2.638244e-55 | -8.615850e-47 |
Msa0225750 | Msa1364430 | 0.817087 | 3.956065e-52 | -8.615850e-47 |
Msa0227230 | Msa1364430 | 0.814597 | 1.421037e-51 | -8.615850e-47 |
Msa0230370 | Msa1364430 | 0.815635 | 8.358106e-52 | -8.615850e-47 |
Msa0237200 | Msa1364430 | 0.822103 | 2.833222e-53 | -8.615850e-47 |
Msa0237210 | Msa1364430 | 0.851417 | 8.998086e-61 | -8.615850e-47 |
Msa1224830 | Msa1364430 | 0.806793 | 6.922132e-50 | -8.615850e-47 |
Msa1226470 | Msa1364430 | 0.816050 | 6.753860e-52 | -8.615850e-47 |
Msa1227320 | Msa1364430 | 0.814580 | 1.432757e-51 | -8.615850e-47 |
Msa1253550 | Msa1364430 | 0.819721 | 1.001006e-52 | -8.615850e-47 |
Msa1254620 | Msa1364430 | 0.817090 | 3.948338e-52 | -8.615850e-47 |
Msa1258340 | Msa1364430 | 0.813926 | 1.998542e-51 | -8.615850e-47 |
Msa1259640 | Msa1364430 | 0.830379 | 3.036141e-55 | -8.615850e-47 |
Msa1276660 | Msa1364430 | 0.826061 | 3.334531e-54 | -8.615850e-47 |
Msa1282500 | Msa1364430 | 0.859367 | 4.345650e-63 | -8.615850e-47 |
Msa1283740 | Msa1364430 | 0.824342 | 8.500986e-54 | -8.615850e-47 |
Msa1298370 | Msa1364430 | 0.822692 | 2.067892e-53 | -8.615850e-47 |
Msa1299330 | Msa1364430 | 0.801069 | 1.071516e-48 | -8.615850e-47 |
Msa1306390 | Msa1364430 | 0.801890 | 7.274429e-49 | -8.615850e-47 |
Msa1320670 | Msa1364430 | 0.840461 | 8.575953e-58 | -8.615850e-47 |
Msa1320820 | Msa1364430 | 0.815228 | 1.029600e-51 | -8.615850e-47 |
Msa1328640 | Msa1364430 | 0.830606 | 2.672177e-55 | -8.615850e-47 |
Msa1329790 | Msa1364430 | 0.842866 | 1.989924e-58 | -8.615850e-47 |
Msa1332000 | Msa1364430 | 0.839033 | 2.018615e-57 | -8.615850e-47 |
Msa1340130 | Msa1364430 | 0.807905 | 4.021776e-50 | -8.615850e-47 |
Msa0372810 | Msa1364430 | 0.818776 | 1.642593e-52 | -8.615850e-47 |
Msa0376020 | Msa1364430 | 0.829927 | 3.914554e-55 | -8.615850e-47 |
Msa0377440 | Msa1364430 | 0.806216 | 9.160661e-50 | -8.615850e-47 |
Msa0378970 | Msa1364430 | 0.840127 | 1.048362e-57 | -8.615850e-47 |
Msa0379610 | Msa1364430 | 0.827402 | 1.596292e-54 | -8.615850e-47 |
Msa0382370 | Msa1364430 | 0.803879 | 2.824192e-49 | -8.615850e-47 |
Msa0387950 | Msa1364430 | 0.815784 | 7.740038e-52 | -8.615850e-47 |
Msa0389910 | Msa1364430 | 0.809352 | 1.974078e-50 | -8.615850e-47 |
Msa0392200 | Msa1364430 | 0.810598 | 1.064573e-50 | -8.615850e-47 |
Msa0394690 | Msa1364430 | 0.818912 | 1.530494e-52 | -8.615850e-47 |
Msa0395980 | Msa1364430 | 0.803366 | 3.607763e-49 | -8.615850e-47 |
Msa0398240 | Msa1364430 | 0.835892 | 1.288201e-56 | -8.615850e-47 |
Msa0410300 | Msa1364430 | 0.800410 | 1.460142e-48 | -8.615850e-47 |
Msa0410870 | Msa1364430 | 0.813520 | 2.455783e-51 | -8.615850e-47 |
Msa0411410 | Msa1364430 | 0.801037 | 1.087516e-48 | -8.615850e-47 |
Msa0415530 | Msa1364430 | 0.811544 | 6.640419e-51 | -8.615850e-47 |
Msa0423840 | Msa1364430 | 0.826301 | 2.924875e-54 | -8.615850e-47 |
Msa0428050 | Msa1364430 | 0.839404 | 1.616705e-57 | -8.615850e-47 |
Msa0428580 | Msa1364430 | 0.826289 | 2.943105e-54 | -8.615850e-47 |
Msa0432160 | Msa1364430 | 0.820352 | 7.176535e-53 | -8.615850e-47 |
Msa0432170 | Msa1364430 | 0.885879 | 5.553733e-72 | -8.615850e-47 |
Msa0434570 | Msa1364430 | 0.803808 | 2.921090e-49 | -8.615850e-47 |
Msa0450400 | Msa1364430 | -0.803362 | 3.614271e-49 | -8.615850e-47 |
Msa0467430 | Msa1364430 | 0.808136 | 3.591606e-50 | -8.615850e-47 |
Msa0468250 | Msa1364430 | 0.838666 | 2.511084e-57 | -8.615850e-47 |
Msa0468800 | Msa1364430 | 0.837360 | 5.442468e-57 | -8.615850e-47 |
Msa0473980 | Msa1364430 | 0.832483 | 9.211111e-56 | -8.615850e-47 |
Msa0474390 | Msa1364430 | 0.810588 | 1.069923e-50 | -8.615850e-47 |
Msa0474940 | Msa1364430 | 0.843567 | 1.294591e-58 | -8.615850e-47 |
Msa0476680 | Msa1364430 | 0.821483 | 3.941438e-53 | -8.615850e-47 |
Msa0476690 | Msa1364430 | 0.853297 | 2.622511e-61 | -8.615850e-47 |
Msa0479200 | Msa1364430 | 0.816230 | 6.154992e-52 | -8.615850e-47 |
Msa0480780 | Msa1364430 | 0.851324 | 9.560839e-61 | -8.615850e-47 |
Msa0980940 | Msa1364430 | 0.818827 | 1.599575e-52 | -8.615850e-47 |
Msa0996020 | Msa1364430 | 0.831563 | 1.555264e-55 | -8.615850e-47 |
Msa1000160 | Msa1364430 | 0.801698 | 7.965199e-49 | -8.615850e-47 |
Msa1010070 | Msa1364430 | 0.849343 | 3.436707e-60 | -8.615850e-47 |
Msa1027990 | Msa1364430 | 0.813709 | 2.231619e-51 | -8.615850e-47 |
Msa1028280 | Msa1364430 | 0.830027 | 3.699284e-55 | -8.615850e-47 |
Msa1034500 | Msa1364430 | 0.807010 | 6.229237e-50 | -8.615850e-47 |
Msa1036280 | Msa1364430 | 0.801589 | 8.383895e-49 | -8.615850e-47 |
Msa1038080 | Msa1364430 | 0.805385 | 1.369511e-49 | -8.615850e-47 |
Msa1041670 | Msa1364430 | 0.805981 | 1.026818e-49 | -8.615850e-47 |
Msa1050910 | Msa1364430 | 0.858393 | 8.496710e-63 | -8.615850e-47 |
Msa1050960 | Msa1364430 | 0.851892 | 6.601581e-61 | -8.615850e-47 |
Msa1051600 | Msa1364430 | 0.823063 | 1.694814e-53 | -8.615850e-47 |
Msa1051990 | Msa1364430 | 0.816250 | 6.091471e-52 | -8.615850e-47 |
Msa1065430 | Msa1364430 | 0.825912 | 3.619471e-54 | -8.615850e-47 |
Msa1068100 | Msa1364430 | 0.865280 | 6.623192e-65 | -8.615850e-47 |
Msa1072600 | Msa1364430 | 0.805207 | 1.491989e-49 | -8.615850e-47 |
Msa1076560 | Msa1364430 | 0.811836 | 5.736391e-51 | -8.615850e-47 |
Msa1077070 | Msa1364430 | 0.818459 | 1.938415e-52 | -8.615850e-47 |
Msa1079860 | Msa1364430 | 0.843943 | 1.026476e-58 | -8.615850e-47 |
Msa1080960 | Msa1364430 | 0.809484 | 1.849205e-50 | -8.615850e-47 |
Msa1088410 | Msa1364430 | 0.834368 | 3.121304e-56 | -8.615850e-47 |
Msa1095790 | Msa1364430 | 0.808915 | 2.449026e-50 | -8.615850e-47 |
Msa1098890 | Msa1364430 | 0.857157 | 1.976740e-62 | -8.615850e-47 |
Msa0253290 | Msa1364430 | 0.812789 | 3.552082e-51 | -8.615850e-47 |
Msa0259220 | Msa1364430 | 0.801216 | 9.999634e-49 | -8.615850e-47 |
Msa0260620 | Msa1364430 | 0.805849 | 1.094567e-49 | -8.615850e-47 |
Msa0263080 | Msa1364430 | 0.809830 | 1.558737e-50 | -8.615850e-47 |
Msa0263710 | Msa1364430 | 0.805097 | 1.573129e-49 | -8.615850e-47 |
Msa0269520 | Msa1364430 | 0.806314 | 8.734373e-50 | -8.615850e-47 |
Msa0274970 | Msa1364430 | 0.824823 | 6.548999e-54 | -8.615850e-47 |
Msa0274980 | Msa1364430 | 0.802195 | 6.295950e-49 | -8.615850e-47 |
Msa0279390 | Msa1364430 | 0.812721 | 3.675962e-51 | -8.615850e-47 |
Msa0279850 | Msa1364430 | 0.816982 | 4.175882e-52 | -8.615850e-47 |
Msa0284350 | Msa1364430 | 0.834098 | 3.646845e-56 | -8.615850e-47 |
Msa0300270 | Msa1364430 | 0.804623 | 1.976812e-49 | -8.615850e-47 |
Msa0300320 | Msa1364430 | 0.821206 | 4.566952e-53 | -8.615850e-47 |
Msa0302890 | Msa1364430 | 0.815767 | 7.810415e-52 | -8.615850e-47 |
Msa0305330 | Msa1364430 | 0.815428 | 9.291548e-52 | -8.615850e-47 |
Msa0307570 | Msa1364430 | 0.811100 | 8.287338e-51 | -8.615850e-47 |
Msa0307860 | Msa1364430 | 0.815896 | 7.307447e-52 | -8.615850e-47 |
Msa0311060 | Msa1364430 | 0.809105 | 2.230169e-50 | -8.615850e-47 |
Msa0312530 | Msa1364430 | 0.803153 | 3.992556e-49 | -8.615850e-47 |
Msa0315680 | Msa1364430 | 0.827662 | 1.382137e-54 | -8.615850e-47 |
Msa0315690 | Msa1364430 | 0.831196 | 1.914178e-55 | -8.615850e-47 |
Msa0317730 | Msa1364430 | 0.813740 | 2.196277e-51 | -8.615850e-47 |
Msa0317740 | Msa1364430 | 0.844452 | 7.494593e-59 | -8.615850e-47 |
Msa0318880 | Msa1364430 | 0.835847 | 1.321778e-56 | -8.615850e-47 |
Msa0322900 | Msa1364430 | 0.824883 | 6.341787e-54 | -8.615850e-47 |
Msa0337700 | Msa1364430 | 0.807166 | 5.773120e-50 | -8.615850e-47 |
Msa0342010 | Msa1364430 | 0.815754 | 7.861471e-52 | -8.615850e-47 |
Msa0343300 | Msa1364430 | 0.815694 | 8.107371e-52 | -8.615850e-47 |
Msa0346990 | Msa1364430 | 0.806670 | 7.347262e-50 | -8.615850e-47 |
Msa0347950 | Msa1364430 | 0.804648 | 1.952791e-49 | -8.615850e-47 |
Msa0347990 | Msa1364430 | 0.808919 | 2.444471e-50 | -8.615850e-47 |
Msa0358400 | Msa1364430 | 0.852281 | 5.117462e-61 | -8.615850e-47 |
Msa0363400 | Msa1364430 | 0.854111 | 1.530095e-61 | -8.615850e-47 |
Msa1112380 | Msa1364430 | 0.816720 | 4.781187e-52 | -8.615850e-47 |
Msa1121590 | Msa1364430 | 0.820548 | 6.473263e-53 | -8.615850e-47 |
Msa1122780 | Msa1364430 | 0.814789 | 1.288033e-51 | -8.615850e-47 |
Msa1127430 | Msa1364430 | 0.802142 | 6.455710e-49 | -8.615850e-47 |
Msa1127540 | Msa1364430 | 0.810906 | 9.131454e-51 | -8.615850e-47 |
Msa1127590 | Msa1364430 | 0.814124 | 1.807171e-51 | -8.615850e-47 |
Msa1129690 | Msa1364430 | 0.822363 | 2.465346e-53 | -8.615850e-47 |
Msa1132480 | Msa1364430 | 0.824565 | 7.533855e-54 | -8.615850e-47 |
Msa1139890 | Msa1364430 | 0.823743 | 1.175329e-53 | -8.615850e-47 |
Msa1140400 | Msa1364430 | 0.834994 | 2.172598e-56 | -8.615850e-47 |
Msa1144750 | Msa1364430 | 0.850978 | 1.196937e-60 | -8.615850e-47 |
Msa1145810 | Msa1364430 | 0.802477 | 5.507624e-49 | -8.615850e-47 |
Msa1156260 | Msa1364430 | 0.840342 | 9.210163e-58 | -8.615850e-47 |
Msa1161810 | Msa1364430 | 0.805901 | 1.067032e-49 | -8.615850e-47 |
Msa1162770 | Msa1364430 | 0.807299 | 5.408703e-50 | -8.615850e-47 |
Msa1166560 | Msa1364430 | 0.806627 | 7.505044e-50 | -8.615850e-47 |
Msa1188180 | Msa1364430 | 0.808505 | 2.997343e-50 | -8.615850e-47 |
Msa1199570 | Msa1364430 | 0.806120 | 9.595770e-50 | -8.615850e-47 |
Msa1201640 | Msa1364430 | 0.841757 | 3.915714e-58 | -8.615850e-47 |
Msa1203400 | Msa1364430 | 0.800452 | 1.431479e-48 | -8.615850e-47 |
Msa1208160 | Msa1364430 | 0.809829 | 1.559115e-50 | -8.615850e-47 |
Msa1208430 | Msa1364430 | 0.809271 | 2.054412e-50 | -8.615850e-47 |
Msa1211340 | Msa1364430 | 0.832180 | 1.095130e-55 | -8.615850e-47 |
Msa1214160 | Msa1364430 | 0.803487 | 3.405515e-49 | -8.615850e-47 |
Msa1219000 | Msa1364430 | 0.805562 | 1.257390e-49 | -8.615850e-47 |
Msa0483100 | Msa1364430 | 0.827515 | 1.499248e-54 | -8.615850e-47 |
Msa0483740 | Msa1364430 | 0.822438 | 2.369295e-53 | -8.615850e-47 |
Msa0487780 | Msa1364430 | 0.800426 | 1.449291e-48 | -8.615850e-47 |
Msa0510290 | Msa1364430 | 0.837423 | 5.244050e-57 | -8.615850e-47 |
Msa0512870 | Msa1364430 | 0.817483 | 3.221077e-52 | -8.615850e-47 |
Msa0516020 | Msa1364430 | 0.831535 | 1.579899e-55 | -8.615850e-47 |
Msa0516120 | Msa1364430 | 0.822979 | 1.773117e-53 | -8.615850e-47 |
Msa0518960 | Msa1364430 | 0.843809 | 1.115396e-58 | -8.615850e-47 |
Msa0521010 | Msa1364430 | 0.822884 | 1.865564e-53 | -8.615850e-47 |
Msa0521020 | Msa1364430 | 0.824628 | 7.280930e-54 | -8.615850e-47 |
Msa0531250 | Msa1364430 | 0.806083 | 9.773089e-50 | -8.615850e-47 |
Msa0544730 | Msa1364430 | 0.814933 | 1.197002e-51 | -8.615850e-47 |
Msa0549280 | Msa1364430 | 0.824745 | 6.832609e-54 | -8.615850e-47 |
Msa0553200 | Msa1364430 | 0.824816 | 6.575929e-54 | -8.615850e-47 |
Msa0556010 | Msa1364430 | 0.824597 | 7.406326e-54 | -8.615850e-47 |
Msa0574390 | Msa1364430 | 0.804459 | 2.138259e-49 | -8.615850e-47 |
Msa0576680 | Msa1364430 | 0.834988 | 2.178959e-56 | -8.615850e-47 |
Msa0581690 | Msa1364430 | 0.829296 | 5.573810e-55 | -8.615850e-47 |
Msa0588090 | Msa1364430 | 0.803089 | 4.117092e-49 | -8.615850e-47 |
Msa0597770 | Msa1364430 | 0.851250 | 1.002800e-60 | -8.615850e-47 |
Msa0601950 | Msa1364430 | 0.826851 | 2.162555e-54 | -8.615850e-47 |
Msa0861510 | Msa1364430 | 0.832263 | 1.044477e-55 | -8.615850e-47 |
Msa0861530 | Msa1364430 | 0.842721 | 2.175722e-58 | -8.615850e-47 |
Msa0861600 | Msa1364430 | 0.829310 | 5.530817e-55 | -8.615850e-47 |
Msa0868160 | Msa1364430 | 0.810792 | 9.665765e-51 | -8.615850e-47 |
Msa0870650 | Msa1364430 | 0.811464 | 6.910613e-51 | -8.615850e-47 |
Msa0873860 | Msa1364430 | 0.828231 | 1.008271e-54 | -8.615850e-47 |
Msa0876060 | Msa1364430 | 0.804598 | 2.000131e-49 | -8.615850e-47 |
Msa0880450 | Msa1364430 | 0.802537 | 5.351834e-49 | -8.615850e-47 |
Msa0896240 | Msa1364430 | 0.811352 | 7.307622e-51 | -8.615850e-47 |
Msa0900620 | Msa1364430 | 0.808934 | 2.426336e-50 | -8.615850e-47 |
Msa0903780 | Msa1364430 | 0.801754 | 7.755295e-49 | -8.615850e-47 |
Msa0905590 | Msa1364430 | 0.830089 | 3.573254e-55 | -8.615850e-47 |
Msa0906690 | Msa1364430 | 0.811273 | 7.603196e-51 | -8.615850e-47 |
Msa0909770 | Msa1364430 | 0.822074 | 2.877368e-53 | -8.615850e-47 |
Msa0921000 | Msa1364430 | 0.819123 | 1.369976e-52 | -8.615850e-47 |
Msa0926670 | Msa1364430 | 0.817699 | 2.879484e-52 | -8.615850e-47 |
Msa0932350 | Msa1364430 | 0.818549 | 1.850014e-52 | -8.615850e-47 |
Msa0937430 | Msa1364430 | 0.845143 | 4.879010e-59 | -8.615850e-47 |
Msa0939000 | Msa1364430 | 0.818226 | 2.188843e-52 | -8.615850e-47 |
Msa0944660 | Msa1364430 | 0.835049 | 2.103831e-56 | -8.615850e-47 |
Msa0945240 | Msa1364430 | 0.851064 | 1.131994e-60 | -8.615850e-47 |
Msa0959520 | Msa1364430 | 0.808855 | 2.523050e-50 | -8.615850e-47 |
Msa0965850 | Msa1364430 | 0.802724 | 4.898377e-49 | -8.615850e-47 |
Msa0969330 | Msa1364430 | 0.836851 | 7.342882e-57 | -8.615850e-47 |
Msa0975940 | Msa1364430 | 0.818287 | 2.120952e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1364430 | MtrunA17_Chr7g0249641 | 96.290 | 593 | 19 | 2 | 1 | 591 | 1 | 592 | 0.0 | 1151 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1364430 | AT1G65470.2 | 46.853 | 572 | 270 | 9 | 28 | 591 | 21 | 566 | 6.09e-139 | 424 |
Msa1364430 | AT1G65470.1 | 47.569 | 576 | 268 | 11 | 28 | 591 | 21 | 574 | 4.96e-138 | 421 |
Find 134 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATGCTGATGCTGATATTT+TGG | 0.163103 | tig0018135:+13657 | Msa1364430:CDS |
CGCTTTCGAGGGTTGGATTT+GGG | 0.181625 | tig0018135:-13301 | None:intergenic |
GCAGGTCACACTTTCATTTA+TGG | 0.201384 | tig0018135:+16661 | Msa1364430:intron |
ACGCTTGGATCCTTCCTTAA+TGG | 0.205884 | tig0018135:-17282 | None:intergenic |
TGCTTATTACAGAGGGGTTT+TGG | 0.220658 | tig0018135:+13405 | Msa1364430:CDS |
GAAGTTGAACATTTGGAATT+TGG | 0.231141 | tig0018135:+13039 | None:intergenic |
TGGAATAAGGGAAATGAAAA+TGG | 0.239034 | tig0018135:-13150 | None:intergenic |
CCCTAATCGGAGGTGGAATA+AGG | 0.239437 | tig0018135:-13163 | None:intergenic |
ACAAAAGCAAGTCTCAATTA+TGG | 0.251427 | tig0018135:+15926 | Msa1364430:CDS |
ATCATTCTGATTCATGTCTT+TGG | 0.254230 | tig0018135:+13683 | Msa1364430:CDS |
CCTTATTCCACCTCCGATTA+GGG | 0.264057 | tig0018135:+13163 | Msa1364430:five_prime_UTR |
TAAAGTGAACTGAAAATATT+TGG | 0.266077 | tig0018135:-13097 | None:intergenic |
CCTTCCTCGATAGTACTTCT+TGG | 0.289125 | tig0018135:-16901 | None:intergenic |
CCCTTATTCCACCTCCGATT+AGG | 0.294428 | tig0018135:+13162 | Msa1364430:five_prime_UTR |
TCGCTTTCGAGGGTTGGATT+TGG | 0.308475 | tig0018135:-13302 | None:intergenic |
TTGTTTGCAGTTCACATTGT+AGG | 0.313048 | tig0018135:-15116 | None:intergenic |
TTGGAGGACGTCATCCATTA+AGG | 0.314346 | tig0018135:+17268 | Msa1364430:CDS |
AGCTCTCCTCGAACAGATTT+CGG | 0.317637 | tig0018135:-13956 | None:intergenic |
TTTCATTTATGGCGCTCTTT+AGG | 0.324079 | tig0018135:+16672 | Msa1364430:CDS |
AAGAGTAGTGTGTTGTTTGC+TGG | 0.327622 | tig0018135:+13610 | Msa1364430:CDS |
CGTGGTGGTTGCGGCGTTGA+TGG | 0.333252 | tig0018135:+13474 | Msa1364430:CDS |
AATGTAAGAAGTTGAACATT+TGG | 0.342203 | tig0018135:+13032 | None:intergenic |
TTGTTATTCGACGCACTTGT+CGG | 0.356057 | tig0018135:+13978 | Msa1364430:CDS |
GGGGATTGTGTTGGCGGAAG+GGG | 0.357109 | tig0018135:+13570 | Msa1364430:CDS |
CTGATTCATGTCTTTGGTGT+TGG | 0.362682 | tig0018135:+13689 | Msa1364430:CDS |
TCGCTCTGAACAGAGGGATT+AGG | 0.366654 | tig0018135:-15972 | None:intergenic |
TCGAACCTCCGCATTGCTTA+AGG | 0.367255 | tig0018135:-13447 | None:intergenic |
GGTGGCGGTGGTTGTGGTGG+AGG | 0.370622 | tig0018135:-13253 | None:intergenic |
ATTTGCGCTTGTTTCTCTTC+GGG | 0.373163 | tig0018135:-13349 | None:intergenic |
TGAGGTGGTGGCGGTGGTTG+TGG | 0.381810 | tig0018135:-13259 | None:intergenic |
TGATTCATGTCTTTGGTGTT+GGG | 0.389779 | tig0018135:+13690 | Msa1364430:CDS |
TTGTTAAAAGCTTCAGTCTT+GGG | 0.390193 | tig0018135:-16744 | None:intergenic |
GTTGTGGTGGAGGAGTGGTT+TGG | 0.391596 | tig0018135:-13243 | None:intergenic |
GACAGGATCATGGCTGTATC+TGG | 0.395958 | tig0018135:+14013 | Msa1364430:CDS |
GATTTGCGCTTGTTTCTCTT+CGG | 0.401076 | tig0018135:-13350 | None:intergenic |
AACTGAAAATATTTGGTGTT+TGG | 0.401856 | tig0018135:-13090 | None:intergenic |
GGGTTGGATTTGGGACGATT+TGG | 0.425622 | tig0018135:-13292 | None:intergenic |
GGAATAAGGGAAATGAAAAT+GGG | 0.428488 | tig0018135:-13149 | None:intergenic |
TGTATTTATAGTCATGTTGT+TGG | 0.432134 | tig0018135:+17249 | Msa1364430:intron |
CGATTTGGTGTTGGATCTTG+AGG | 0.433773 | tig0018135:-13277 | None:intergenic |
GAAAAGGATGCAGACCGATT+AGG | 0.439137 | tig0018135:+16819 | Msa1364430:CDS |
GGAAGGGGTTAATTCAGCTT+TGG | 0.440309 | tig0018135:+13585 | Msa1364430:CDS |
CCTAATCGGAGGTGGAATAA+GGG | 0.443618 | tig0018135:-13162 | None:intergenic |
TTCGAGAAACGTGGTGGTTG+CGG | 0.445489 | tig0018135:+13465 | Msa1364430:CDS |
CTGGACTACTTTCTCCTAAT+CGG | 0.457878 | tig0018135:-16833 | None:intergenic |
AAAATTGCTAATTAAACAGT+TGG | 0.458316 | tig0018135:+15038 | Msa1364430:CDS |
GACATTCGCATGATAGTTGA+AGG | 0.459315 | tig0018135:+14870 | Msa1364430:CDS |
AAACCATAAAAGGCTGGTCT+AGG | 0.464102 | tig0018135:-16948 | None:intergenic |
TATGTCAGCTACTCTTTCAA+TGG | 0.465368 | tig0018135:+16055 | Msa1364430:CDS |
GGTGGTGGCGGTGGTTGTGG+TGG | 0.466786 | tig0018135:-13256 | None:intergenic |
GCAATTCATGAGGATGAGTT+AGG | 0.467673 | tig0018135:+16792 | Msa1364430:CDS |
TTTGTTAAAAGCTTCAGTCT+TGG | 0.468049 | tig0018135:-16745 | None:intergenic |
ACTTACTTGCGAAGATCCTC+AGG | 0.468632 | tig0018135:-16110 | None:intergenic |
CAAAATATCAGCATCAGCAT+TGG | 0.468700 | tig0018135:-13656 | None:intergenic |
TGGTGGAGGAGTGGTTTGGA+CGG | 0.475446 | tig0018135:-13239 | None:intergenic |
CGGTGGTTGTGGTGGAGGAG+TGG | 0.476087 | tig0018135:-13248 | None:intergenic |
AGAGTAGTGTGTTGTTTGCT+GGG | 0.478774 | tig0018135:+13611 | Msa1364430:CDS |
GATGGATTCTTTGTACCAGA+TGG | 0.480905 | tig0018135:+17526 | Msa1364430:CDS |
AAAATATCAGCATCAGCATT+GGG | 0.483686 | tig0018135:-13655 | None:intergenic |
GAACATTTGGAATTTGGAAG+TGG | 0.485632 | tig0018135:+13045 | Msa1364430:five_prime_UTR |
TGAATTGTGAAGTGGCGAAT+GGG | 0.486970 | tig0018135:+13548 | Msa1364430:CDS |
TCTGATGGAGAAAGTGAAGA+TGG | 0.487964 | tig0018135:+17508 | Msa1364430:CDS |
GGATCTTGAGGTGGTGGCGG+TGG | 0.490632 | tig0018135:-13265 | None:intergenic |
CTCAAACAGAAAACAGAGAT+GGG | 0.493093 | tig0018135:+16707 | Msa1364430:CDS |
ATTGAGCATGAATTACCATC+TGG | 0.498051 | tig0018135:-16852 | None:intergenic |
GGTGTTGGATCTTGAGGTGG+TGG | 0.500595 | tig0018135:-13271 | None:intergenic |
TGTCAGCAGCGATGAGGAAT+GGG | 0.505324 | tig0018135:+17314 | Msa1364430:CDS |
CATTTGGAATTTGGAAGTGG+AGG | 0.505539 | tig0018135:+13048 | Msa1364430:five_prime_UTR |
GTTGGATCTTGAGGTGGTGG+CGG | 0.506170 | tig0018135:-13268 | None:intergenic |
GTGTGTTGTTTGCTGGGCAG+AGG | 0.507517 | tig0018135:+13617 | Msa1364430:CDS |
TTGTCAGCAGCGATGAGGAA+TGG | 0.512945 | tig0018135:+17313 | Msa1364430:CDS |
AGATTGTGAGAAAGATGAAG+AGG | 0.516959 | tig0018135:+17462 | Msa1364430:CDS |
TGGAGGAGTGGTTTGGACGG+TGG | 0.517012 | tig0018135:-13236 | None:intergenic |
ATTTATAGTCATGTTGTTGG+AGG | 0.522578 | tig0018135:+17252 | Msa1364430:intron |
TTATAGTCAAAACTTAATCA+AGG | 0.530499 | tig0018135:+14812 | Msa1364430:CDS |
GACGGTGGTGTCAATTTGCA+TGG | 0.534096 | tig0018135:-13221 | None:intergenic |
AGTACTTCTTGGCATCAAGA+TGG | 0.534096 | tig0018135:-16890 | None:intergenic |
GATTTGGGACGATTTGGTGT+TGG | 0.536331 | tig0018135:-13286 | None:intergenic |
CAGCGATGAGGAATGGGAAG+AGG | 0.546041 | tig0018135:+17320 | Msa1364430:CDS |
TCTCTCAGATGATGAGGTAG+AGG | 0.550593 | tig0018135:+17552 | Msa1364430:CDS |
GGTGTCAATTTGCATGGTGG+TGG | 0.553543 | tig0018135:-13215 | None:intergenic |
GTACTTCTTGGCATCAAGAT+GGG | 0.553860 | tig0018135:-16889 | None:intergenic |
AAAGATCCACGACAGGATCA+TGG | 0.554368 | tig0018135:+14003 | Msa1364430:CDS |
CTGACAACATAATCAACGCT+TGG | 0.554493 | tig0018135:-17297 | None:intergenic |
GGTTGTTTGCTTATTACAGA+GGG | 0.555082 | tig0018135:+13398 | Msa1364430:CDS |
TCATCTGAGAGATACCCATC+TGG | 0.559172 | tig0018135:-17541 | None:intergenic |
GTGGAGGCAACAAAAGCACT+TGG | 0.561782 | tig0018135:+13064 | Msa1364430:five_prime_UTR |
ATGGATTCTTTGTACCAGAT+GGG | 0.562593 | tig0018135:+17527 | Msa1364430:CDS |
ACTTTGTCGCTCTGAACAGA+GGG | 0.566161 | tig0018135:-15978 | None:intergenic |
GAGGAAGGTTCAAAATCTGA+TGG | 0.568843 | tig0018135:+17493 | Msa1364430:CDS |
TTGTTGCCGAAATCTGTTCG+AGG | 0.572625 | tig0018135:+13950 | Msa1364430:CDS |
GAAGAGGAATGTCAAGAGGA+AGG | 0.573812 | tig0018135:+17478 | Msa1364430:CDS |
CTGAATTGTGAAGTGGCGAA+TGG | 0.576328 | tig0018135:+13547 | Msa1364430:CDS |
AGATGAAGAGGAATGTCAAG+AGG | 0.577660 | tig0018135:+17474 | Msa1364430:CDS |
GGATGAGTTAGGCACCGAAA+AGG | 0.579468 | tig0018135:+16803 | Msa1364430:CDS |
GCTCAAACAGAAAACAGAGA+TGG | 0.580529 | tig0018135:+16706 | Msa1364430:CDS |
GAATTGTGAAGTGGCGAATG+GGG | 0.580861 | tig0018135:+13549 | Msa1364430:CDS |
TTCAAAGTTGTCCCAAGGTG+AGG | 0.585887 | tig0018135:+15782 | Msa1364430:CDS |
TTCATGTCTTTGGTGTTGGG+AGG | 0.591006 | tig0018135:+13693 | Msa1364430:CDS |
CTTAACAAATCATCTGCAGT+GGG | 0.591857 | tig0018135:-16011 | None:intergenic |
GTTGTTATTGTAGACTAGGG+AGG | 0.592831 | tig0018135:+13922 | Msa1364430:intron |
CCAAGAAGTACTATCGAGGA+AGG | 0.593952 | tig0018135:+16901 | Msa1364430:CDS |
GCTGAGTAAAACTTCTACTG+AGG | 0.600514 | tig0018135:+14845 | Msa1364430:CDS |
ATGAGAAATGTTGCGAACAG+AGG | 0.602168 | tig0018135:+15814 | Msa1364430:CDS |
AACTTTGTCGCTCTGAACAG+AGG | 0.606807 | tig0018135:-15979 | None:intergenic |
CAATCTGAAAGACTTTCACC+AGG | 0.607556 | tig0018135:-17433 | None:intergenic |
GCTTAACAAATCATCTGCAG+TGG | 0.609619 | tig0018135:-16012 | None:intergenic |
TGGGTATCTCTCAGATGATG+AGG | 0.610119 | tig0018135:+17546 | Msa1364430:CDS |
GGTGGTTGCGGCGTTGATGG+AGG | 0.612733 | tig0018135:+13477 | Msa1364430:CDS |
TCATCAACAAGCTTCGACAA+CGG | 0.616224 | tig0018135:-13511 | None:intergenic |
AATTGTGAAGTGGCGAATGG+GGG | 0.623209 | tig0018135:+13550 | Msa1364430:CDS |
GGGTTGTTTGCTTATTACAG+AGG | 0.629300 | tig0018135:+13397 | Msa1364430:CDS |
TTTGGTGTTGGATCTTGAGG+TGG | 0.629389 | tig0018135:-13274 | None:intergenic |
TACTAAATCTGCAATTCATG+AGG | 0.629885 | tig0018135:+16782 | Msa1364430:CDS |
TGAGAAGCTGAATTGTGAAG+TGG | 0.631929 | tig0018135:+13540 | Msa1364430:CDS |
TTAGGAGAAAGTAGTCCAGA+TGG | 0.632131 | tig0018135:+16837 | Msa1364430:CDS |
GAATAAGGGAAATGAAAATG+GGG | 0.636896 | tig0018135:-13148 | None:intergenic |
ACAAGTTCAAAGTTGTCCCA+AGG | 0.638713 | tig0018135:+15777 | Msa1364430:CDS |
AGGACGTCATCCATTAAGGA+AGG | 0.639077 | tig0018135:+17272 | Msa1364430:CDS |
ACAACAAAAGAAGCAAGCAG+AGG | 0.639627 | tig0018135:+15839 | Msa1364430:CDS |
GCTGGGCAGAGGATGATGTA+CGG | 0.640684 | tig0018135:+13628 | Msa1364430:CDS |
ATTGACCTTAAGCAATGCGG+AGG | 0.643580 | tig0018135:+13442 | Msa1364430:CDS |
AAGTAGTGATATTAAGCCTG+AGG | 0.651722 | tig0018135:+16094 | Msa1364430:CDS |
ATTGTGAAGTGGCGAATGGG+GGG | 0.662126 | tig0018135:+13551 | Msa1364430:CDS |
TTATGTTGTCAGCAGCGATG+AGG | 0.668119 | tig0018135:+17308 | Msa1364430:CDS |
ATGCGGAGGTTCGAGAAACG+TGG | 0.674122 | tig0018135:+13456 | Msa1364430:CDS |
TGGAGGCAACAAAAGCACTT+GGG | 0.674285 | tig0018135:+13065 | Msa1364430:five_prime_UTR |
GGTGGTGTCAATTTGCATGG+TGG | 0.675819 | tig0018135:-13218 | None:intergenic |
ATACAGCCATGATCCTGTCG+TGG | 0.676276 | tig0018135:-14009 | None:intergenic |
CGGAGGTTCGAGAAACGTGG+TGG | 0.685380 | tig0018135:+13459 | Msa1364430:CDS |
TCAAACAGAAAACAGAGATG+GGG | 0.687278 | tig0018135:+16708 | Msa1364430:CDS |
GATGCCAAGAAGTACTATCG+AGG | 0.690027 | tig0018135:+16897 | Msa1364430:CDS |
GTTGTTTGCTTATTACAGAG+GGG | 0.700903 | tig0018135:+13399 | Msa1364430:CDS |
GTGATTGACCTTAAGCAATG+CGG | 0.712346 | tig0018135:+13439 | Msa1364430:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTTTAAAAATTATTTT+TGG | - | tig0018135:16200-16219 | None:intergenic | 0.0% |
!!! | ATAATTTTTAAAATAAAAAT+TGG | + | tig0018135:16203-16222 | Msa1364430:intron | 0.0% |
!! | ATAAAAATTGTAAAATAACA+GGG | - | tig0018135:15414-15433 | None:intergenic | 10.0% |
!! | AATAAAAATTGTAAAATAAC+AGG | - | tig0018135:15415-15434 | None:intergenic | 10.0% |
!!! | TTTAAAATAAAAATTGGATA+TGG | + | tig0018135:16209-16228 | Msa1364430:intron | 10.0% |
!! | TTAAAATAAAAATTGGATAT+GGG | + | tig0018135:16210-16229 | Msa1364430:intron | 10.0% |
!!! | AATTTTTTTTTTTTTTTGTG+AGG | + | tig0018135:16295-16314 | Msa1364430:intron | 10.0% |
!!! | TGATTTTTTTTCTTGATTTT+TGG | + | tig0018135:13716-13735 | Msa1364430:intron | 15.0% |
!!! | ATTAAGTTTTGACTATAATT+AGG | - | tig0018135:14810-14829 | None:intergenic | 15.0% |
!!! | TTTTTCTAAATTATAATTGC+AGG | + | tig0018135:14989-15008 | Msa1364430:intron | 15.0% |
!!! | TTTTCTAAATTATAATTGCA+GGG | + | tig0018135:14990-15009 | Msa1364430:intron | 15.0% |
!! | TTGTAAAATGACTTAAATTT+GGG | - | tig0018135:15336-15355 | None:intergenic | 15.0% |
!! | ATTGTAAAATGACTTAAATT+TGG | - | tig0018135:15337-15356 | None:intergenic | 15.0% |
!! | AGAATCAAGAAAATTATAAT+AGG | - | tig0018135:16429-16448 | None:intergenic | 15.0% |
!! | CTATGTCTATATTTAAAAAA+TGG | + | tig0018135:17032-17051 | Msa1364430:intron | 15.0% |
!! | ATCATCATTAATTTATTGTA+TGG | + | tig0018135:17173-17192 | Msa1364430:intron | 15.0% |
!!! | AATGATGTTCTTTATTTTTA+AGG | + | tig0018135:17405-17424 | Msa1364430:intron | 15.0% |
!! | TAAAGTGAACTGAAAATATT+TGG | - | tig0018135:13100-13119 | None:intergenic | 20.0% |
!!! | ATGAATGTTTTTTAAGATGT+TGG | + | tig0018135:13817-13836 | Msa1364430:intron | 20.0% |
!!! | CAATTACATGCTTTAAAAAA+GGG | - | tig0018135:14679-14698 | None:intergenic | 20.0% |
!!! | ACAATTACATGCTTTAAAAA+AGG | - | tig0018135:14680-14699 | None:intergenic | 20.0% |
!!! | TGTAATTGTTGTGAAAATTT+TGG | + | tig0018135:14691-14710 | Msa1364430:intron | 20.0% |
!! | TTATAGTCAAAACTTAATCA+AGG | + | tig0018135:14812-14831 | Msa1364430:CDS | 20.0% |
!!! | TAATTAGCAATTTTTCTTCT+TGG | - | tig0018135:15032-15051 | None:intergenic | 20.0% |
!! | AAAATTGCTAATTAAACAGT+TGG | + | tig0018135:15038-15057 | Msa1364430:CDS | 20.0% |
!!! | TAACAAATGTAATGGAAATT+TGG | - | tig0018135:15262-15281 | None:intergenic | 20.0% |
!! | ACAGGGTAATAAATATTAAA+GGG | - | tig0018135:15397-15416 | None:intergenic | 20.0% |
!! | AACAGGGTAATAAATATTAA+AGG | - | tig0018135:15398-15417 | None:intergenic | 20.0% |
!! | TTATTTATGTAGTACAAAAG+GGG | - | tig0018135:16378-16397 | None:intergenic | 20.0% |
!! | GTTATTTATGTAGTACAAAA+GGG | - | tig0018135:16379-16398 | None:intergenic | 20.0% |
!!! | TGTTATTTATGTAGTACAAA+AGG | - | tig0018135:16380-16399 | None:intergenic | 20.0% |
!! | ATAGGAAGATAATATTTACA+AGG | - | tig0018135:16411-16430 | None:intergenic | 20.0% |
!! | GAATGTTATACTTGTAAAAA+AGG | + | tig0018135:16512-16531 | Msa1364430:intron | 20.0% |
!!! | ATTTCATATTGACTTATACT+AGG | + | tig0018135:17009-17028 | Msa1364430:intron | 20.0% |
!! | TAAATGCATATAATTGTTTC+AGG | + | tig0018135:17143-17162 | Msa1364430:intron | 20.0% |
!!! | AACTGAAAATATTTGGTGTT+TGG | - | tig0018135:13093-13112 | None:intergenic | 25.0% |
! | TGAAAAAGAAAAACCCTAAT+CGG | - | tig0018135:13179-13198 | None:intergenic | 25.0% |
! | GAAAAAAAGATGTTAATTCG+CGG | + | tig0018135:13323-13342 | Msa1364430:CDS | 25.0% |
!!! | TATTTGTTGTGTGATTTAAC+TGG | + | tig0018135:13774-13793 | Msa1364430:intron | 25.0% |
!!! | ATTTGTTGTGTGATTTAACT+GGG | + | tig0018135:13775-13794 | Msa1364430:intron | 25.0% |
!!! | TTGGTTATGTTGATAGTAAT+TGG | + | tig0018135:13836-13855 | Msa1364430:intron | 25.0% |
!!! | TGGTTATGTTGATAGTAATT+GGG | + | tig0018135:13837-13856 | Msa1364430:intron | 25.0% |
!! | TATGTTGTTATTGTAGACTA+GGG | + | tig0018135:13919-13938 | Msa1364430:intron | 25.0% |
! | TTGTCAAATACAAACTCAAA+CGG | + | tig0018135:14111-14130 | Msa1364430:intron | 25.0% |
! | AACTTGGAATTCTAAACAAA+CGG | - | tig0018135:14199-14218 | None:intergenic | 25.0% |
!!! | AACAAAGTTTTGTCAAATAG+TGG | + | tig0018135:14495-14514 | Msa1364430:intron | 25.0% |
! | TAGTGGAATATGCAAATAAT+TGG | + | tig0018135:14616-14635 | Msa1364430:intron | 25.0% |
! | GAACAATTCATATATTTGCA+AGG | - | tig0018135:14962-14981 | None:intergenic | 25.0% |
! | AATCAAAACAACACTTACAA+TGG | - | tig0018135:15145-15164 | None:intergenic | 25.0% |
! | GTATCTTCTAACAAATGTAA+TGG | - | tig0018135:15270-15289 | None:intergenic | 25.0% |
! | TCCAAATTATTAGTCAGTTT+GGG | + | tig0018135:15298-15317 | Msa1364430:intron | 25.0% |
! | ACAAAATTACCCTTCATTTA+TGG | - | tig0018135:15451-15470 | None:intergenic | 25.0% |
!!! | ATTTCTTAATTTGTGCGAAA+TGG | + | tig0018135:15494-15513 | Msa1364430:intron | 25.0% |
! | TGGCAAAATGACTTATAATT+TGG | + | tig0018135:15514-15533 | Msa1364430:intron | 25.0% |
! | GGCAAAATGACTTATAATTT+GGG | + | tig0018135:15515-15534 | Msa1364430:intron | 25.0% |
! | AAATGACTTATAATTTGGGA+TGG | + | tig0018135:15519-15538 | Msa1364430:intron | 25.0% |
! | AACATACAGTATAAAAGGAA+AGG | - | tig0018135:16327-16346 | None:intergenic | 25.0% |
! | GGAAAAACATACAGTATAAA+AGG | - | tig0018135:16332-16351 | None:intergenic | 25.0% |
! | AAAGAATAATACCCGTAAAA+CGG | - | tig0018135:16355-16374 | None:intergenic | 25.0% |
! | AGATAATATTTACAAGGAGT+CGG | - | tig0018135:16405-16424 | None:intergenic | 25.0% |
! | TGTGGATATGATGAAAAATA+AGG | - | tig0018135:16541-16560 | None:intergenic | 25.0% |
!! | GCATTTAATTTAACTAACCA+GGG | - | tig0018135:17130-17149 | None:intergenic | 25.0% |
!! | TGCATTTAATTTAACTAACC+AGG | - | tig0018135:17131-17150 | None:intergenic | 25.0% |
! | TGTATTTATAGTCATGTTGT+TGG | + | tig0018135:17249-17268 | Msa1364430:intron | 25.0% |
! | ATGAATAAGATAAGATGCAA+AGG | - | tig0018135:17355-17374 | None:intergenic | 25.0% |
!!! | GATGTTCTTTATTTTTAAGG+AGG | + | tig0018135:17408-17427 | Msa1364430:intron | 25.0% |
GAATAAGGGAAATGAAAATG+GGG | - | tig0018135:13151-13170 | None:intergenic | 30.0% | |
GGAATAAGGGAAATGAAAAT+GGG | - | tig0018135:13152-13171 | None:intergenic | 30.0% | |
TGGAATAAGGGAAATGAAAA+TGG | - | tig0018135:13153-13172 | None:intergenic | 30.0% | |
AAAATATCAGCATCAGCATT+GGG | - | tig0018135:13658-13677 | None:intergenic | 30.0% | |
ATCATTCTGATTCATGTCTT+TGG | + | tig0018135:13683-13702 | Msa1364430:CDS | 30.0% | |
TGTTGAAGCTGAATGTATAT+TGG | + | tig0018135:13864-13883 | Msa1364430:intron | 30.0% | |
! | CTATGTTGTTATTGTAGACT+AGG | + | tig0018135:13918-13937 | Msa1364430:intron | 30.0% |
TGACAACACAGATAAATCAA+AGG | - | tig0018135:14097-14116 | None:intergenic | 30.0% | |
!! | TCGTTTGAGTTTGTTAAACT+TGG | - | tig0018135:14215-14234 | None:intergenic | 30.0% |
CATAGTGAAATCTGAACAAA+TGG | - | tig0018135:14307-14326 | None:intergenic | 30.0% | |
AGTAAAAACAGTGTTGTCAA+GGG | - | tig0018135:14575-14594 | None:intergenic | 30.0% | |
!!! | AACACTGTTTTTACTGGAAA+AGG | + | tig0018135:14580-14599 | Msa1364430:intron | 30.0% |
! | AGTTTTACTCAGCTTTTTAG+AGG | - | tig0018135:14838-14857 | None:intergenic | 30.0% |
GTCCAAATTATTAGTCAGTT+TGG | + | tig0018135:15297-15316 | Msa1364430:intron | 30.0% | |
TCCCAAACTGACTAATAATT+TGG | - | tig0018135:15302-15321 | None:intergenic | 30.0% | |
TTTCCCATACCATAAATGAA+GGG | + | tig0018135:15439-15458 | Msa1364430:intron | 30.0% | |
TTACCCTTCATTTATGGTAT+GGG | - | tig0018135:15445-15464 | None:intergenic | 30.0% | |
ATTACCCTTCATTTATGGTA+TGG | - | tig0018135:15446-15465 | None:intergenic | 30.0% | |
!!! | TGCAAATACTTTTGGCTTTT+TGG | - | tig0018135:15566-15585 | None:intergenic | 30.0% |
! | TTGGATTGGAAATTAACTTG+CGG | + | tig0018135:15597-15616 | Msa1364430:intron | 30.0% |
TAAGAATGACTATCTCAACT+AGG | - | tig0018135:15667-15686 | None:intergenic | 30.0% | |
ACTTGTTTCCTAGAACAATT+AGG | - | tig0018135:15763-15782 | None:intergenic | 30.0% | |
ACAAAAGCAAGTCTCAATTA+TGG | + | tig0018135:15926-15945 | Msa1364430:CDS | 30.0% | |
AAGAATAATACCCGTAAAAC+GGG | - | tig0018135:16354-16373 | None:intergenic | 30.0% | |
!! | TTTTTAGAAAACCTAAGGTG+TGG | - | tig0018135:16559-16578 | None:intergenic | 30.0% |
!!! | GTGGTTTTTTAGAAAACCTA+AGG | - | tig0018135:16564-16583 | None:intergenic | 30.0% |
TTGTTAAAAGCTTCAGTCTT+GGG | - | tig0018135:16747-16766 | None:intergenic | 30.0% | |
TTTGTTAAAAGCTTCAGTCT+TGG | - | tig0018135:16748-16767 | None:intergenic | 30.0% | |
TACTAAATCTGCAATTCATG+AGG | + | tig0018135:16782-16801 | Msa1364430:CDS | 30.0% | |
! | AGCATGATCTAACCTTTTAA+CGG | - | tig0018135:16979-16998 | None:intergenic | 30.0% |
CTAAACATTTGCATAACTAG+AGG | - | tig0018135:17089-17108 | None:intergenic | 30.0% | |
TGTTTAGTCACTACTTCTAA+AGG | + | tig0018135:17102-17121 | Msa1364430:intron | 30.0% | |
TTATTGTATGGTGTGATATC+TGG | + | tig0018135:17185-17204 | Msa1364430:intron | 30.0% | |
CATCTCAACTAGATATATAC+TGG | - | tig0018135:17213-17232 | None:intergenic | 30.0% | |
ATTTATAGTCATGTTGTTGG+AGG | + | tig0018135:17252-17271 | Msa1364430:intron | 30.0% | |
! | GAACATTTGGAATTTGGAAG+TGG | + | tig0018135:13045-13064 | Msa1364430:five_prime_UTR | 35.0% |
AAAAGAAAAACCCTAATCGG+AGG | - | tig0018135:13176-13195 | None:intergenic | 35.0% | |
!!! | CATCTTTTTTTCGCTTTCGA+GGG | - | tig0018135:13315-13334 | None:intergenic | 35.0% |
!!! | ACATCTTTTTTTCGCTTTCG+AGG | - | tig0018135:13316-13335 | None:intergenic | 35.0% |
GGTTGTTTGCTTATTACAGA+GGG | + | tig0018135:13398-13417 | Msa1364430:CDS | 35.0% | |
GTTGTTTGCTTATTACAGAG+GGG | + | tig0018135:13399-13418 | Msa1364430:CDS | 35.0% | |
CAAAATATCAGCATCAGCAT+TGG | - | tig0018135:13659-13678 | None:intergenic | 35.0% | |
! | CAATGCTGATGCTGATATTT+TGG | + | tig0018135:13657-13676 | Msa1364430:CDS | 35.0% |
!! | TGATTCATGTCTTTGGTGTT+GGG | + | tig0018135:13690-13709 | Msa1364430:CDS | 35.0% |
! | TGGTATGGATTACATTGCTT+TGG | + | tig0018135:14033-14052 | Msa1364430:intron | 35.0% |
! | TTTGAATGCTGTTAGTGGAT+TGG | + | tig0018135:14069-14088 | Msa1364430:intron | 35.0% |
ATCACTATTCACTTGCATAG+TGG | + | tig0018135:14241-14260 | Msa1364430:intron | 35.0% | |
TCACTATTCACTTGCATAGT+GGG | + | tig0018135:14242-14261 | Msa1364430:intron | 35.0% | |
TAAACAAAACCGCTACTGTT+TGG | - | tig0018135:14393-14412 | None:intergenic | 35.0% | |
TAAATGCAGCTATAGAGCTA+TGG | - | tig0018135:14428-14447 | None:intergenic | 35.0% | |
AAAGCATAACGCAGAACAAT+GGG | - | tig0018135:14473-14492 | None:intergenic | 35.0% | |
! | AAAAGCATAACGCAGAACAA+TGG | - | tig0018135:14474-14493 | None:intergenic | 35.0% |
CAGTAAAAACAGTGTTGTCA+AGG | - | tig0018135:14576-14595 | None:intergenic | 35.0% | |
!!! | CTTGACAACACTGTTTTTAC+TGG | + | tig0018135:14574-14593 | Msa1364430:intron | 35.0% |
AAGGAATATGTTGTCGATAG+TGG | + | tig0018135:14599-14618 | Msa1364430:intron | 35.0% | |
GTAATTGAACATGTCAGGAT+AGG | - | tig0018135:14940-14959 | None:intergenic | 35.0% | |
TTGTTTGCAGTTCACATTGT+AGG | - | tig0018135:15119-15138 | None:intergenic | 35.0% | |
AGCTCCAATTACTTCTTACT+CGG | + | tig0018135:15182-15201 | Msa1364430:intron | 35.0% | |
AACACCGAGTAAGAAGTAAT+TGG | - | tig0018135:15189-15208 | None:intergenic | 35.0% | |
CTGACTAATAATTTGGACAG+AGG | - | tig0018135:15295-15314 | None:intergenic | 35.0% | |
CTTTCCCATACCATAAATGA+AGG | + | tig0018135:15438-15457 | Msa1364430:intron | 35.0% | |
! | TGACTTATAATTTGGGATGG+TGG | + | tig0018135:15522-15541 | Msa1364430:intron | 35.0% |
! | GACTTATAATTTGGGATGGT+GGG | + | tig0018135:15523-15542 | Msa1364430:intron | 35.0% |
! | CAACATCGTGCAAATACTTT+TGG | - | tig0018135:15574-15593 | None:intergenic | 35.0% |
CTTAACAAATCATCTGCAGT+GGG | - | tig0018135:16014-16033 | None:intergenic | 35.0% | |
TATGTCAGCTACTCTTTCAA+TGG | + | tig0018135:16055-16074 | Msa1364430:CDS | 35.0% | |
AAGTAGTGATATTAAGCCTG+AGG | + | tig0018135:16094-16113 | Msa1364430:CDS | 35.0% | |
ATATGTACAGTGCACAAGAT+TGG | - | tig0018135:16169-16188 | None:intergenic | 35.0% | |
TTGTGCACTGTACATATACA+TGG | + | tig0018135:16172-16191 | Msa1364430:intron | 35.0% | |
! | GTATGTTTTTCCCCGTTTTA+CGG | + | tig0018135:16340-16359 | Msa1364430:intron | 35.0% |
! | TATGTTTTTCCCCGTTTTAC+GGG | + | tig0018135:16341-16360 | Msa1364430:intron | 35.0% |
AGAATAATACCCGTAAAACG+GGG | - | tig0018135:16353-16372 | None:intergenic | 35.0% | |
TTTCATCATATCCACACCTT+AGG | + | tig0018135:16545-16564 | Msa1364430:intron | 35.0% | |
TGAAAAATGCTTGACTTTGC+AGG | + | tig0018135:16643-16662 | Msa1364430:intron | 35.0% | |
TTTCATTTATGGCGCTCTTT+AGG | + | tig0018135:16672-16691 | Msa1364430:CDS | 35.0% | |
CTCAAACAGAAAACAGAGAT+GGG | + | tig0018135:16707-16726 | Msa1364430:CDS | 35.0% | |
TCAAACAGAAAACAGAGATG+GGG | + | tig0018135:16708-16727 | Msa1364430:CDS | 35.0% | |
ATTGAGCATGAATTACCATC+TGG | - | tig0018135:16855-16874 | None:intergenic | 35.0% | |
! | GCATGATCTAACCTTTTAAC+GGG | - | tig0018135:16978-16997 | None:intergenic | 35.0% |
!!! | TTTATTTTTAAGGAGGAGCC+TGG | + | tig0018135:17415-17434 | Msa1364430:intron | 35.0% |
AGATTGTGAGAAAGATGAAG+AGG | + | tig0018135:17462-17481 | Msa1364430:CDS | 35.0% | |
ATGGATTCTTTGTACCAGAT+GGG | + | tig0018135:17527-17546 | Msa1364430:CDS | 35.0% | |
! | CATTTGGAATTTGGAAGTGG+AGG | + | tig0018135:13048-13067 | Msa1364430:five_prime_UTR | 40.0% |
!!! | TTTTTTTCGCTTTCGAGGGT+TGG | - | tig0018135:13311-13330 | None:intergenic | 40.0% |
! | ATTTGCGCTTGTTTCTCTTC+GGG | - | tig0018135:13352-13371 | None:intergenic | 40.0% |
! | GATTTGCGCTTGTTTCTCTT+CGG | - | tig0018135:13353-13372 | None:intergenic | 40.0% |
GGGTTGTTTGCTTATTACAG+AGG | + | tig0018135:13397-13416 | Msa1364430:CDS | 40.0% | |
! | TGCTTATTACAGAGGGGTTT+TGG | + | tig0018135:13405-13424 | Msa1364430:CDS | 40.0% |
GTGATTGACCTTAAGCAATG+CGG | + | tig0018135:13439-13458 | Msa1364430:CDS | 40.0% | |
TCATCAACAAGCTTCGACAA+CGG | - | tig0018135:13514-13533 | None:intergenic | 40.0% | |
TGAGAAGCTGAATTGTGAAG+TGG | + | tig0018135:13540-13559 | Msa1364430:CDS | 40.0% | |
TGAATTGTGAAGTGGCGAAT+GGG | + | tig0018135:13548-13567 | Msa1364430:CDS | 40.0% | |
!! | AAGAGTAGTGTGTTGTTTGC+TGG | + | tig0018135:13610-13629 | Msa1364430:CDS | 40.0% |
!! | AGAGTAGTGTGTTGTTTGCT+GGG | + | tig0018135:13611-13630 | Msa1364430:CDS | 40.0% |
! | CTGATTCATGTCTTTGGTGT+TGG | + | tig0018135:13689-13708 | Msa1364430:CDS | 40.0% |
! | GTTGTTATTGTAGACTAGGG+AGG | + | tig0018135:13922-13941 | Msa1364430:intron | 40.0% |
! | TTGTTATTCGACGCACTTGT+CGG | + | tig0018135:13978-13997 | Msa1364430:CDS | 40.0% |
TACATTGCTTTGGCTGACTA+TGG | + | tig0018135:14043-14062 | Msa1364430:intron | 40.0% | |
GTGCTATATCACTTGCATAG+CGG | + | tig0018135:14133-14152 | Msa1364430:intron | 40.0% | |
TGCTATATCACTTGCATAGC+GGG | + | tig0018135:14134-14153 | Msa1364430:intron | 40.0% | |
AAGCATAACGCAGAACAATG+GGG | - | tig0018135:14472-14491 | None:intergenic | 40.0% | |
GCTGAGTAAAACTTCTACTG+AGG | + | tig0018135:14845-14864 | Msa1364430:CDS | 40.0% | |
GACATTCGCATGATAGTTGA+AGG | + | tig0018135:14870-14889 | Msa1364430:CDS | 40.0% | |
GCAAGGTAATTGAACATGTC+AGG | - | tig0018135:14945-14964 | None:intergenic | 40.0% | |
!! | TTACTCGGTGTTGCTATCAA+TGG | + | tig0018135:15197-15216 | Msa1364430:intron | 40.0% |
TATTTGCACGATGTTGACGT+TGG | + | tig0018135:15578-15597 | Msa1364430:intron | 40.0% | |
TCCTAGAACAATTAGGCAGT+CGG | - | tig0018135:15756-15775 | None:intergenic | 40.0% | |
ACAAGTTCAAAGTTGTCCCA+AGG | + | tig0018135:15777-15796 | Msa1364430:CDS | 40.0% | |
! | ATCAGTTTTTGCCTCACCTT+GGG | - | tig0018135:15796-15815 | None:intergenic | 40.0% |
ATGAGAAATGTTGCGAACAG+AGG | + | tig0018135:15814-15833 | Msa1364430:CDS | 40.0% | |
ACAACAAAAGAAGCAAGCAG+AGG | + | tig0018135:15839-15858 | Msa1364430:CDS | 40.0% | |
AGGAAGCAGAAAAAGATCAG+CGG | + | tig0018135:15859-15878 | Msa1364430:CDS | 40.0% | |
GCTTAACAAATCATCTGCAG+TGG | - | tig0018135:16015-16034 | None:intergenic | 40.0% | |
!!! | ACAGTGCACAAGATTGGTTT+TGG | - | tig0018135:16163-16182 | None:intergenic | 40.0% |
! | CCTACTCAGGAGTTTTTATG+TGG | - | tig0018135:16583-16602 | None:intergenic | 40.0% |
CCACATAAAAACTCCTGAGT+AGG | + | tig0018135:16580-16599 | Msa1364430:intron | 40.0% | |
GAGAAAGGTAAAACCTACTC+AGG | - | tig0018135:16596-16615 | None:intergenic | 40.0% | |
CAACACGAGATGAAAGAGAA+AGG | - | tig0018135:16611-16630 | None:intergenic | 40.0% | |
GCAGGTCACACTTTCATTTA+TGG | + | tig0018135:16661-16680 | Msa1364430:intron | 40.0% | |
GCTCAAACAGAAAACAGAGA+TGG | + | tig0018135:16706-16725 | Msa1364430:CDS | 40.0% | |
GCAATTCATGAGGATGAGTT+AGG | + | tig0018135:16792-16811 | Msa1364430:CDS | 40.0% | |
! | TAATCGGTCTGCATCCTTTT+CGG | - | tig0018135:16820-16839 | None:intergenic | 40.0% |
CTGGACTACTTTCTCCTAAT+CGG | - | tig0018135:16836-16855 | None:intergenic | 40.0% | |
TTAGGAGAAAGTAGTCCAGA+TGG | + | tig0018135:16837-16856 | Msa1364430:CDS | 40.0% | |
GTACTTCTTGGCATCAAGAT+GGG | - | tig0018135:16892-16911 | None:intergenic | 40.0% | |
AGTACTTCTTGGCATCAAGA+TGG | - | tig0018135:16893-16912 | None:intergenic | 40.0% | |
!! | AAACCATAAAAGGCTGGTCT+AGG | - | tig0018135:16951-16970 | None:intergenic | 40.0% |
! | GACCAGCCTTTTATGGTTTT+TGG | + | tig0018135:16952-16971 | Msa1364430:CDS | 40.0% |
AACGGGCCAAAAACCATAAA+AGG | - | tig0018135:16961-16980 | None:intergenic | 40.0% | |
!!! | ATGGTTTTTGGCCCGTTAAA+AGG | + | tig0018135:16964-16983 | Msa1364430:CDS | 40.0% |
CTGACAACATAATCAACGCT+TGG | - | tig0018135:17300-17319 | None:intergenic | 40.0% | |
CAATCTGAAAGACTTTCACC+AGG | - | tig0018135:17436-17455 | None:intergenic | 40.0% | |
AGATGAAGAGGAATGTCAAG+AGG | + | tig0018135:17474-17493 | Msa1364430:CDS | 40.0% | |
GAGGAAGGTTCAAAATCTGA+TGG | + | tig0018135:17493-17512 | Msa1364430:CDS | 40.0% | |
TCTGATGGAGAAAGTGAAGA+TGG | + | tig0018135:17508-17527 | Msa1364430:CDS | 40.0% | |
! | GATGGATTCTTTGTACCAGA+TGG | + | tig0018135:17526-17545 | Msa1364430:CDS | 40.0% |
!! | TGGAGGCAACAAAAGCACTT+GGG | + | tig0018135:13065-13084 | Msa1364430:five_prime_UTR | 45.0% |
CCTAATCGGAGGTGGAATAA+GGG | - | tig0018135:13165-13184 | None:intergenic | 45.0% | |
CCTTATTCCACCTCCGATTA+GGG | + | tig0018135:13163-13182 | Msa1364430:five_prime_UTR | 45.0% | |
AGAAAAACCCTAATCGGAGG+TGG | - | tig0018135:13173-13192 | None:intergenic | 45.0% | |
!! | TTTGGTGTTGGATCTTGAGG+TGG | - | tig0018135:13277-13296 | None:intergenic | 45.0% |
!! | CGATTTGGTGTTGGATCTTG+AGG | - | tig0018135:13280-13299 | None:intergenic | 45.0% |
!! | GATTTGGGACGATTTGGTGT+TGG | - | tig0018135:13289-13308 | None:intergenic | 45.0% |
ACCCTAGAAAAAGAGCTCGA+AGG | + | tig0018135:13376-13395 | Msa1364430:CDS | 45.0% | |
! | CCCTTCGAGCTCTTTTTCTA+GGG | - | tig0018135:13380-13399 | None:intergenic | 45.0% |
CCCTAGAAAAAGAGCTCGAA+GGG | + | tig0018135:13377-13396 | Msa1364430:CDS | 45.0% | |
! | ACCCTTCGAGCTCTTTTTCT+AGG | - | tig0018135:13381-13400 | None:intergenic | 45.0% |
ATTGACCTTAAGCAATGCGG+AGG | + | tig0018135:13442-13461 | Msa1364430:CDS | 45.0% | |
CTGAATTGTGAAGTGGCGAA+TGG | + | tig0018135:13547-13566 | Msa1364430:CDS | 45.0% | |
GAATTGTGAAGTGGCGAATG+GGG | + | tig0018135:13549-13568 | Msa1364430:CDS | 45.0% | |
AATTGTGAAGTGGCGAATGG+GGG | + | tig0018135:13550-13569 | Msa1364430:CDS | 45.0% | |
GGAAGGGGTTAATTCAGCTT+TGG | + | tig0018135:13585-13604 | Msa1364430:CDS | 45.0% | |
!! | TTCATGTCTTTGGTGTTGGG+AGG | + | tig0018135:13693-13712 | Msa1364430:CDS | 45.0% |
TTGTTGCCGAAATCTGTTCG+AGG | + | tig0018135:13950-13969 | Msa1364430:CDS | 45.0% | |
AGCTCTCCTCGAACAGATTT+CGG | - | tig0018135:13959-13978 | None:intergenic | 45.0% | |
AAAGATCCACGACAGGATCA+TGG | + | tig0018135:14003-14022 | Msa1364430:CDS | 45.0% | |
GATCATGGCTGTATCTGGTA+TGG | + | tig0018135:14018-14037 | Msa1364430:intron | 45.0% | |
! | GGTGCTTTGAATGCTGTTAG+TGG | + | tig0018135:14064-14083 | Msa1364430:intron | 45.0% |
TTGCGACATTGCAACTCTGT+AGG | + | tig0018135:14521-14540 | Msa1364430:intron | 45.0% | |
GTGACGCAATCATTTCTGCA+AGG | - | tig0018135:14767-14786 | None:intergenic | 45.0% | |
CTAGAACAATTAGGCAGTCG+GGG | - | tig0018135:15754-15773 | None:intergenic | 45.0% | |
CCTAGAACAATTAGGCAGTC+GGG | - | tig0018135:15755-15774 | None:intergenic | 45.0% | |
TTCAAAGTTGTCCCAAGGTG+AGG | + | tig0018135:15782-15801 | Msa1364430:CDS | 45.0% | |
! | CATCAGTTTTTGCCTCACCT+TGG | - | tig0018135:15797-15816 | None:intergenic | 45.0% |
! | ACTTTGTCGCTCTGAACAGA+GGG | - | tig0018135:15981-16000 | None:intergenic | 45.0% |
! | AACTTTGTCGCTCTGAACAG+AGG | - | tig0018135:15982-16001 | None:intergenic | 45.0% |
ACTTACTTGCGAAGATCCTC+AGG | - | tig0018135:16113-16132 | None:intergenic | 45.0% | |
TGCCTTTACCCTCTTAAGCA+TGG | + | tig0018135:16132-16151 | Msa1364430:intron | 45.0% | |
GCCTTTACCCTCTTAAGCAT+GGG | + | tig0018135:16133-16152 | Msa1364430:intron | 45.0% | |
ACCCATGCTTAAGAGGGTAA+AGG | - | tig0018135:16137-16156 | None:intergenic | 45.0% | |
GAAAAGGATGCAGACCGATT+AGG | + | tig0018135:16819-16838 | Msa1364430:CDS | 45.0% | |
!! | GATGCCAAGAAGTACTATCG+AGG | + | tig0018135:16897-16916 | Msa1364430:CDS | 45.0% |
CCTTCCTCGATAGTACTTCT+TGG | - | tig0018135:16904-16923 | None:intergenic | 45.0% | |
!! | CCAAGAAGTACTATCGAGGA+AGG | + | tig0018135:16901-16920 | Msa1364430:CDS | 45.0% |
! | ACTCCTAGACCAGCCTTTTA+TGG | + | tig0018135:16945-16964 | Msa1364430:CDS | 45.0% |
GGCCAAAAACCATAAAAGGC+TGG | - | tig0018135:16957-16976 | None:intergenic | 45.0% | |
! | CACTACTTCTAAAGGTTCCC+TGG | + | tig0018135:17110-17129 | Msa1364430:intron | 45.0% |
TTGGAGGACGTCATCCATTA+AGG | + | tig0018135:17268-17287 | Msa1364430:CDS | 45.0% | |
AGGACGTCATCCATTAAGGA+AGG | + | tig0018135:17272-17291 | Msa1364430:CDS | 45.0% | |
ACGCTTGGATCCTTCCTTAA+TGG | - | tig0018135:17285-17304 | None:intergenic | 45.0% | |
TTATGTTGTCAGCAGCGATG+AGG | + | tig0018135:17308-17327 | Msa1364430:CDS | 45.0% | |
GAAGAGGAATGTCAAGAGGA+AGG | + | tig0018135:17478-17497 | Msa1364430:CDS | 45.0% | |
TCATCTGAGAGATACCCATC+TGG | - | tig0018135:17544-17563 | None:intergenic | 45.0% | |
TGGGTATCTCTCAGATGATG+AGG | + | tig0018135:17546-17565 | Msa1364430:CDS | 45.0% | |
TCTCTCAGATGATGAGGTAG+AGG | + | tig0018135:17552-17571 | Msa1364430:CDS | 45.0% | |
!! | GTGGAGGCAACAAAAGCACT+TGG | + | tig0018135:13064-13083 | Msa1364430:five_prime_UTR | 50.0% |
CCCTTATTCCACCTCCGATT+AGG | + | tig0018135:13162-13181 | Msa1364430:five_prime_UTR | 50.0% | |
CCCTAATCGGAGGTGGAATA+AGG | - | tig0018135:13166-13185 | None:intergenic | 50.0% | |
GGTGTCAATTTGCATGGTGG+TGG | - | tig0018135:13218-13237 | None:intergenic | 50.0% | |
! | GGTGGTGTCAATTTGCATGG+TGG | - | tig0018135:13221-13240 | None:intergenic | 50.0% |
! | GACGGTGGTGTCAATTTGCA+TGG | - | tig0018135:13224-13243 | None:intergenic | 50.0% |
! | GGGTTGGATTTGGGACGATT+TGG | - | tig0018135:13295-13314 | None:intergenic | 50.0% |
CGCTTTCGAGGGTTGGATTT+GGG | - | tig0018135:13304-13323 | None:intergenic | 50.0% | |
TCGCTTTCGAGGGTTGGATT+TGG | - | tig0018135:13305-13324 | None:intergenic | 50.0% | |
TCGAACCTCCGCATTGCTTA+AGG | - | tig0018135:13450-13469 | None:intergenic | 50.0% | |
TTCGAGAAACGTGGTGGTTG+CGG | + | tig0018135:13465-13484 | Msa1364430:CDS | 50.0% | |
ATTGTGAAGTGGCGAATGGG+GGG | + | tig0018135:13551-13570 | Msa1364430:CDS | 50.0% | |
GTCGGAAAAAGATCCACGAC+AGG | + | tig0018135:13996-14015 | Msa1364430:CDS | 50.0% | |
ATACAGCCATGATCCTGTCG+TGG | - | tig0018135:14012-14031 | None:intergenic | 50.0% | |
GACAGGATCATGGCTGTATC+TGG | + | tig0018135:14013-14032 | Msa1364430:CDS | 50.0% | |
AGCGTATCGCCAAACAGTAG+CGG | + | tig0018135:14381-14400 | Msa1364430:intron | 50.0% | |
GCACGATGTTGACGTTGGAT+TGG | + | tig0018135:15583-15602 | Msa1364430:intron | 50.0% | |
CAATTAGGCAGTCGGGGAAA+AGG | - | tig0018135:15748-15767 | None:intergenic | 50.0% | |
CCCGACTGCCTAATTGTTCT+AGG | + | tig0018135:15752-15771 | Msa1364430:intron | 50.0% | |
! | TCGCTCTGAACAGAGGGATT+AGG | - | tig0018135:15975-15994 | None:intergenic | 50.0% |
! | TGGAGCACCCATGCTTAAGA+GGG | - | tig0018135:16143-16162 | None:intergenic | 50.0% |
! | TTGGAGCACCCATGCTTAAG+AGG | - | tig0018135:16144-16163 | None:intergenic | 50.0% |
!! | GGATGAGTTAGGCACCGAAA+AGG | + | tig0018135:16803-16822 | Msa1364430:CDS | 50.0% |
TTGTCAGCAGCGATGAGGAA+TGG | + | tig0018135:17313-17332 | Msa1364430:CDS | 50.0% | |
TGTCAGCAGCGATGAGGAAT+GGG | + | tig0018135:17314-17333 | Msa1364430:CDS | 50.0% | |
! | TGGTGGAGGAGTGGTTTGGA+CGG | - | tig0018135:13242-13261 | None:intergenic | 55.0% |
! | GTTGTGGTGGAGGAGTGGTT+TGG | - | tig0018135:13246-13265 | None:intergenic | 55.0% |
! | GTTGGATCTTGAGGTGGTGG+CGG | - | tig0018135:13271-13290 | None:intergenic | 55.0% |
! | GGTGTTGGATCTTGAGGTGG+TGG | - | tig0018135:13274-13293 | None:intergenic | 55.0% |
ATGCGGAGGTTCGAGAAACG+TGG | + | tig0018135:13456-13475 | Msa1364430:CDS | 55.0% | |
GAATGGGGGGATTGTGTTGG+CGG | + | tig0018135:13564-13583 | Msa1364430:CDS | 55.0% | |
!! | GTGTGTTGTTTGCTGGGCAG+AGG | + | tig0018135:13617-13636 | Msa1364430:CDS | 55.0% |
GCTGGGCAGAGGATGATGTA+CGG | + | tig0018135:13628-13647 | Msa1364430:CDS | 55.0% | |
CAGCGATGAGGAATGGGAAG+AGG | + | tig0018135:17320-17339 | Msa1364430:CDS | 55.0% | |
! | TGGAGGAGTGGTTTGGACGG+TGG | - | tig0018135:13239-13258 | None:intergenic | 60.0% |
CGGAGGTTCGAGAAACGTGG+TGG | + | tig0018135:13459-13478 | Msa1364430:CDS | 60.0% | |
GGCGAATGGGGGGATTGTGT+TGG | + | tig0018135:13561-13580 | Msa1364430:CDS | 60.0% | |
! | GGGGGATTGTGTTGGCGGAA+GGG | + | tig0018135:13569-13588 | Msa1364430:CDS | 60.0% |
! | GGGGATTGTGTTGGCGGAAG+GGG | + | tig0018135:13570-13589 | Msa1364430:CDS | 60.0% |
! | CGGTGGTTGTGGTGGAGGAG+TGG | - | tig0018135:13251-13270 | None:intergenic | 65.0% |
!! | TGAGGTGGTGGCGGTGGTTG+TGG | - | tig0018135:13262-13281 | None:intergenic | 65.0% |
!! | GGATCTTGAGGTGGTGGCGG+TGG | - | tig0018135:13268-13287 | None:intergenic | 65.0% |
! | CGTGGTGGTTGCGGCGTTGA+TGG | + | tig0018135:13474-13493 | Msa1364430:CDS | 65.0% |
!! | GGTGGTTGCGGCGTTGATGG+AGG | + | tig0018135:13477-13496 | Msa1364430:CDS | 65.0% |
! | GGGGGGATTGTGTTGGCGGA+AGG | + | tig0018135:13568-13587 | Msa1364430:CDS | 65.0% |
! | GGTGGCGGTGGTTGTGGTGG+AGG | - | tig0018135:13256-13275 | None:intergenic | 70.0% |
!! | GGTGGTGGCGGTGGTTGTGG+TGG | - | tig0018135:13259-13278 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0018135 | gene | 13045 | 17579 | 13045 | ID=Msa1364430;Name=Msa1364430 |
tig0018135 | mRNA | 13045 | 17579 | 13045 | ID=Msa1364430-mRNA-1;Parent=Msa1364430;Name=Msa1364430-mRNA-1;_AED=0.02;_eAED=0.02;_QI=178|0.71|0.62|1|1|1|8|0|594 |
tig0018135 | exon | 13045 | 13714 | 13045 | ID=Msa1364430-mRNA-1:exon:13995;Parent=Msa1364430-mRNA-1 |
tig0018135 | exon | 13935 | 14034 | 13935 | ID=Msa1364430-mRNA-1:exon:13996;Parent=Msa1364430-mRNA-1 |
tig0018135 | exon | 14772 | 14919 | 14772 | ID=Msa1364430-mRNA-1:exon:13997;Parent=Msa1364430-mRNA-1 |
tig0018135 | exon | 15011 | 15146 | 15011 | ID=Msa1364430-mRNA-1:exon:13998;Parent=Msa1364430-mRNA-1 |
tig0018135 | exon | 15774 | 16126 | 15774 | ID=Msa1364430-mRNA-1:exon:13999;Parent=Msa1364430-mRNA-1 |
tig0018135 | exon | 16665 | 16985 | 16665 | ID=Msa1364430-mRNA-1:exon:14000;Parent=Msa1364430-mRNA-1 |
tig0018135 | exon | 17260 | 17341 | 17260 | ID=Msa1364430-mRNA-1:exon:14001;Parent=Msa1364430-mRNA-1 |
tig0018135 | exon | 17427 | 17579 | 17427 | ID=Msa1364430-mRNA-1:exon:14002;Parent=Msa1364430-mRNA-1 |
tig0018135 | five_prime_UTR | 13045 | 13222 | 13045 | ID=Msa1364430-mRNA-1:five_prime_utr;Parent=Msa1364430-mRNA-1 |
tig0018135 | CDS | 13223 | 13714 | 13223 | ID=Msa1364430-mRNA-1:cds;Parent=Msa1364430-mRNA-1 |
tig0018135 | CDS | 13935 | 14034 | 13935 | ID=Msa1364430-mRNA-1:cds;Parent=Msa1364430-mRNA-1 |
tig0018135 | CDS | 14772 | 14919 | 14772 | ID=Msa1364430-mRNA-1:cds;Parent=Msa1364430-mRNA-1 |
tig0018135 | CDS | 15011 | 15146 | 15011 | ID=Msa1364430-mRNA-1:cds;Parent=Msa1364430-mRNA-1 |
tig0018135 | CDS | 15774 | 16126 | 15774 | ID=Msa1364430-mRNA-1:cds;Parent=Msa1364430-mRNA-1 |
tig0018135 | CDS | 16665 | 16985 | 16665 | ID=Msa1364430-mRNA-1:cds;Parent=Msa1364430-mRNA-1 |
tig0018135 | CDS | 17260 | 17341 | 17260 | ID=Msa1364430-mRNA-1:cds;Parent=Msa1364430-mRNA-1 |
tig0018135 | CDS | 17427 | 17579 | 17427 | ID=Msa1364430-mRNA-1:cds;Parent=Msa1364430-mRNA-1 |
Gene Sequence |
Protein sequence |