Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121950 | ABN05684.1 | 98.239 | 284 | 5 | 0 | 1 | 284 | 1 | 284 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121950 | sp|Q2R4J1|GDT13_ORYSJ | 78.244 | 262 | 53 | 1 | 26 | 283 | 18 | 279 | 9.17e-136 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121950 | A2Q167 | 98.239 | 284 | 5 | 0 | 1 | 284 | 1 | 284 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1067990 | Msa1121950 | 0.838282 | 3.154830e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121950 | MtrunA17_Chr7g0249231 | 98.239 | 284 | 5 | 0 | 1 | 284 | 1 | 284 | 0.0 | 561 |
| Msa1121950 | MtrunA17_Chr1g0210221 | 40.351 | 228 | 109 | 3 | 74 | 281 | 6 | 226 | 1.00e-51 | 169 |
| Msa1121950 | MtrunA17_Chr1g0169451 | 41.232 | 211 | 117 | 2 | 76 | 279 | 152 | 362 | 1.42e-41 | 147 |
| Msa1121950 | MtrunA17_Chr5g0397071 | 36.019 | 211 | 114 | 5 | 82 | 279 | 145 | 347 | 2.14e-28 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121950 | AT5G36290.1 | 73.852 | 283 | 62 | 5 | 13 | 283 | 11 | 293 | 2.42e-132 | 377 |
| Msa1121950 | AT5G36290.2 | 73.852 | 283 | 62 | 5 | 13 | 283 | 11 | 293 | 2.42e-132 | 377 |
| Msa1121950 | AT1G68650.1 | 43.946 | 223 | 111 | 2 | 72 | 281 | 4 | 225 | 9.74e-56 | 179 |
| Msa1121950 | AT1G25520.1 | 41.991 | 231 | 100 | 2 | 72 | 278 | 4 | 224 | 3.08e-55 | 178 |
| Msa1121950 | AT4G13590.1 | 40.741 | 216 | 111 | 4 | 76 | 279 | 146 | 356 | 1.23e-41 | 147 |
| Msa1121950 | AT4G13590.2 | 40.741 | 216 | 111 | 4 | 76 | 279 | 146 | 356 | 1.36e-41 | 147 |
| Msa1121950 | AT1G64150.1 | 34.559 | 272 | 143 | 8 | 27 | 274 | 101 | 361 | 5.79e-25 | 102 |
Find 109 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTCTTCTGTGAAGATTT+TGG | 0.120668 | 7_3:+72048218 | None:intergenic |
| GTTGTCTTTGTTGTAGAATT+TGG | 0.160892 | 7_3:-72047077 | Msa1121950:three_prime_UTR |
| TGCTTCTTTGAAATCAAATT+TGG | 0.183884 | 7_3:+72048852 | None:intergenic |
| CATTGTTATTGTCATTATTT+TGG | 0.214461 | 7_3:-72046959 | Msa1121950:three_prime_UTR |
| TTCGAAGACTCCCTTACTTT+TGG | 0.257491 | 7_3:-72046895 | Msa1121950:three_prime_UTR |
| TCTCTTAGCTTGGATTCTTC+TGG | 0.261688 | 7_3:-72050049 | Msa1121950:CDS |
| CAAAATCTTATATTCCAATT+AGG | 0.264772 | 7_3:+72047021 | None:intergenic |
| TAGGAAAGTTCGATCCTAAT+TGG | 0.295140 | 7_3:-72047035 | Msa1121950:three_prime_UTR |
| TTGTCTTTGTTGTAGAATTT+GGG | 0.312632 | 7_3:-72047076 | Msa1121950:three_prime_UTR |
| ATTTATTATAGCAGCTCTTA+TGG | 0.317879 | 7_3:-72049148 | Msa1121950:CDS |
| GTCGGTGGCCTTCTCTTCCT+TGG | 0.339008 | 7_3:-72047219 | Msa1121950:CDS |
| AAGAAGAAAATTAGAAAGTA+AGG | 0.349891 | 7_3:+72050549 | None:intergenic |
| AAGTAGCAACAGCCGTGTTT+GGG | 0.350023 | 7_3:-72050680 | Msa1121950:five_prime_UTR |
| ATCATTTAAATCGTGTTTGT+TGG | 0.352507 | 7_3:+72046787 | None:intergenic |
| AAAGTAGCAACAGCCGTGTT+TGG | 0.355307 | 7_3:-72050681 | Msa1121950:five_prime_UTR |
| TTTATATTCATAGGATTCTC+TGG | 0.357110 | 7_3:-72050247 | Msa1121950:intron |
| AATTAGGATCGAACTTTCCT+AGG | 0.363531 | 7_3:+72047037 | None:intergenic |
| AGCTTGGATTCTTCTGGTGT+TGG | 0.387172 | 7_3:-72050043 | Msa1121950:CDS |
| TTCGGTCATTTCTCTTAGCT+TGG | 0.388909 | 7_3:-72050059 | Msa1121950:CDS |
| TACGACTGCTGTACATTGCT+TGG | 0.393896 | 7_3:-72048250 | Msa1121950:CDS |
| CCTAAGTCAATTGTCTTGTC+TGG | 0.404108 | 7_3:-72049114 | Msa1121950:CDS |
| TTACTGCAATTGTCGCAATC+TGG | 0.411024 | 7_3:+72047533 | None:intergenic |
| CCGGTAGTGGGATCTGGTTA+TGG | 0.415994 | 7_3:+72050577 | None:intergenic |
| GTAGCAGCTGGGGCCACCAT+AGG | 0.426028 | 7_3:-72047321 | Msa1121950:CDS |
| AATTCCAAAATCCAAAAGTA+AGG | 0.426194 | 7_3:+72046884 | None:intergenic |
| GTCCATTAGGTACTTTCTAC+AGG | 0.433115 | 7_3:-72048891 | Msa1121950:intron |
| TGCATGACTATCTATTGAAA+TGG | 0.438461 | 7_3:+72046836 | None:intergenic |
| GACAAGGGAAAACTTCATTT+CGG | 0.446559 | 7_3:-72047716 | Msa1121950:CDS |
| GTAGATCCGGTAGTGGGATC+TGG | 0.462407 | 7_3:+72050571 | None:intergenic |
| ATCTTCACAGAAGAAAGAAA+TGG | 0.475060 | 7_3:-72048213 | Msa1121950:CDS |
| GACAGTGGCTACAGAGCGTT+GGG | 0.479778 | 7_3:+72047239 | None:intergenic |
| AATGCAATCGGAGTAGCAGC+TGG | 0.484261 | 7_3:-72047333 | Msa1121950:CDS |
| GTTTGGGGATCTTGCATCGA+AGG | 0.485451 | 7_3:-72050664 | Msa1121950:five_prime_UTR |
| ACTTACCGTCATTATAATCA+AGG | 0.489547 | 7_3:+72049080 | None:intergenic |
| ATTAGAAAGTAAGGTAGATC+CGG | 0.490579 | 7_3:+72050558 | None:intergenic |
| ATTCTCTGGCTCACGACGAC+AGG | 0.492028 | 7_3:-72050233 | Msa1121950:CDS |
| TTCAACGATGTGTGGAGAGA+AGG | 0.496951 | 7_3:+72046919 | None:intergenic |
| CTCTAGATTAATACAAGTGC+TGG | 0.497882 | 7_3:-72047167 | Msa1121950:exon |
| GCACTACGATTCAACATCAA+TGG | 0.507707 | 7_3:-72050389 | Msa1121950:CDS |
| CACGACGACAGGCAAGAATC+CGG | 0.512240 | 7_3:-72050222 | Msa1121950:CDS |
| AAGAAAAGCCAAGGAAGAGA+AGG | 0.512821 | 7_3:+72047211 | None:intergenic |
| GCGTTGAATGATATAGAGAA+TGG | 0.513923 | 7_3:-72050082 | Msa1121950:CDS |
| CATACAAATAGTGCTGCTAC+AGG | 0.516828 | 7_3:-72048831 | Msa1121950:intron |
| TAGCAGCTGGGGCCACCATA+GGG | 0.516894 | 7_3:-72047320 | Msa1121950:CDS |
| CGTCGTTCAAACCTTCGCTC+AGG | 0.518400 | 7_3:-72050333 | Msa1121950:intron |
| GAGGAAGCATGCTGGCATCT+AGG | 0.521221 | 7_3:-72047266 | Msa1121950:CDS |
| ATGTACCTCAGTGGCAGTGG+TGG | 0.534768 | 7_3:-72047289 | Msa1121950:CDS |
| CAATTGTCGCAATCTGGCTA+CGG | 0.543283 | 7_3:+72047539 | None:intergenic |
| ATGCAATCGGAGTAGCAGCT+GGG | 0.543597 | 7_3:-72047332 | Msa1121950:CDS |
| CGACAGTGGCTACAGAGCGT+TGG | 0.546302 | 7_3:+72047238 | None:intergenic |
| TCCGGTGGATCTGTGGATCT+CGG | 0.548999 | 7_3:-72050204 | Msa1121950:CDS |
| TTTAACATTCCTTGCTGAGT+GGG | 0.550817 | 7_3:-72047566 | Msa1121950:CDS |
| GATTGCGTGAATTGAAATGA+AGG | 0.552253 | 7_3:+72050627 | None:intergenic |
| ATTAGGATCGAACTTTCCTA+GGG | 0.552495 | 7_3:+72047038 | None:intergenic |
| GCAGAGGAGAAGAACGAAAA+CGG | 0.558746 | 7_3:+72050358 | None:intergenic |
| AGTGGTGGGAGGAAGCATGC+TGG | 0.559364 | 7_3:-72047274 | Msa1121950:CDS |
| GCAAGAATCCGGTGGATCTG+TGG | 0.559609 | 7_3:-72050211 | Msa1121950:CDS |
| ATCAATGATTCTCGTTAGTG+AGG | 0.560283 | 7_3:-72049993 | Msa1121950:intron |
| CCAGACAAGACAATTGACTT+AGG | 0.562706 | 7_3:+72049114 | None:intergenic |
| AATATGTACCTCAGTGGCAG+TGG | 0.565729 | 7_3:-72047292 | Msa1121950:CDS |
| TCAACGATGTGTGGAGAGAA+GGG | 0.569143 | 7_3:+72046920 | None:intergenic |
| CAACGCTCTGTAGCCACTGT+CGG | 0.569412 | 7_3:-72047237 | Msa1121950:CDS |
| ATGAAGACAAAGAAAAGCCA+AGG | 0.570147 | 7_3:+72047202 | None:intergenic |
| TAGGTACTTTCTACAGGACT+AGG | 0.570677 | 7_3:-72048885 | Msa1121950:CDS |
| GGTACATATTGTGTGCCCTA+TGG | 0.570961 | 7_3:+72047305 | None:intergenic |
| CTGTGGCGGTTGAATTTGCG+AGG | 0.571205 | 7_3:+72050422 | None:intergenic |
| GAATGATATAGAGAATGGTT+CGG | 0.572567 | 7_3:-72050077 | Msa1121950:CDS |
| AGCACTTGTATTAATCTAGA+GGG | 0.573165 | 7_3:+72047169 | None:intergenic |
| CAAAATAATGACAATAACAA+TGG | 0.573630 | 7_3:+72046960 | None:intergenic |
| AAGTAAGGTAGATCCGGTAG+TGG | 0.578706 | 7_3:+72050564 | None:intergenic |
| AGGTTTGAACGACGAAGCAG+AGG | 0.579424 | 7_3:+72050342 | None:intergenic |
| GAAGAGAAGGCCACCGACAG+TGG | 0.584502 | 7_3:+72047224 | None:intergenic |
| ATTCCAAAATCCAAAAGTAA+GGG | 0.584772 | 7_3:+72046885 | None:intergenic |
| TACGGTCACCCCACTCAGCA+AGG | 0.586363 | 7_3:+72047557 | None:intergenic |
| AGATTAATACAAGTGCTGGT+TGG | 0.587086 | 7_3:-72047163 | Msa1121950:exon |
| GTTGTATCTACCTACTCCCT+AGG | 0.587735 | 7_3:-72047054 | Msa1121950:three_prime_UTR |
| ACATATTGTGTGCCCTATGG+TGG | 0.588291 | 7_3:+72047308 | None:intergenic |
| ACCTCAGTGGCAGTGGTGGG+AGG | 0.588861 | 7_3:-72047285 | Msa1121950:CDS |
| CAGCACTTGTATTAATCTAG+AGG | 0.589972 | 7_3:+72047168 | None:intergenic |
| ACCGAGATCCACAGATCCAC+CGG | 0.590630 | 7_3:+72050203 | None:intergenic |
| AAGTGCCTTGATTATAATGA+CGG | 0.591556 | 7_3:-72049085 | Msa1121950:intron |
| CTTCGAAGTTCAACGATGTG+TGG | 0.596681 | 7_3:+72046911 | None:intergenic |
| CGCTCTGTAGCCACTGTCGG+TGG | 0.597879 | 7_3:-72047234 | Msa1121950:CDS |
| TTTAAATGATGACTTTGACT+AGG | 0.598691 | 7_3:-72046774 | Msa1121950:three_prime_UTR |
| CACTTGTATTAATCTAGAGG+GGG | 0.603175 | 7_3:+72047171 | None:intergenic |
| CCATAACCAGATCCCACTAC+CGG | 0.603818 | 7_3:-72050577 | Msa1121950:five_prime_UTR |
| TACTTTCTACAGGACTAGGA+AGG | 0.605041 | 7_3:-72048881 | Msa1121950:CDS |
| TTAACATTCCTTGCTGAGTG+GGG | 0.606715 | 7_3:-72047565 | Msa1121950:CDS |
| CGATGCAAGATCCCCAAACA+CGG | 0.608435 | 7_3:+72050668 | None:intergenic |
| AGTAGCAACAGCCGTGTTTG+GGG | 0.618648 | 7_3:-72050679 | Msa1121950:five_prime_UTR |
| AATGAAGCTGACCTGAGCGA+AGG | 0.623925 | 7_3:+72050322 | None:intergenic |
| AGCACGTTGAAACTGTAATG+TGG | 0.629172 | 7_3:-72046860 | Msa1121950:three_prime_UTR |
| TGTACCTCAGTGGCAGTGGT+GGG | 0.630607 | 7_3:-72047288 | Msa1121950:CDS |
| ATCGAACTTTCCTAGGGAGT+AGG | 0.631723 | 7_3:+72047044 | None:intergenic |
| TCCTCCCACCACTGCCACTG+AGG | 0.633636 | 7_3:+72047284 | None:intergenic |
| TAGGGATGCTTACTTTGGCG+CGG | 0.641057 | 7_3:+72050178 | None:intergenic |
| TGCAATCGGAGTAGCAGCTG+GGG | 0.642034 | 7_3:-72047331 | Msa1121950:CDS |
| AGTAAGGTAGATCCGGTAGT+GGG | 0.643825 | 7_3:+72050565 | None:intergenic |
| GCACTTGTATTAATCTAGAG+GGG | 0.643990 | 7_3:+72047170 | None:intergenic |
| GTGAATTGAAATGAAGGTGA+TGG | 0.649740 | 7_3:+72050633 | None:intergenic |
| AAGGGAAAACTTCATTTCGG+CGG | 0.657157 | 7_3:-72047713 | Msa1121950:CDS |
| TGTGGCGGTTGAATTTGCGA+GGG | 0.661732 | 7_3:+72050423 | None:intergenic |
| ACTTGTATTAATCTAGAGGG+GGG | 0.683100 | 7_3:+72047172 | None:intergenic |
| GACGACAGGCAAGAATCCGG+TGG | 0.690791 | 7_3:-72050219 | Msa1121950:CDS |
| GATGTTGAATCGTAGTGCCA+TGG | 0.692820 | 7_3:+72050394 | None:intergenic |
| GTGCCATGGTGAATCTGTGG+CGG | 0.700561 | 7_3:+72050408 | None:intergenic |
| CAACCGCCACAGATTCACCA+TGG | 0.703037 | 7_3:-72050411 | Msa1121950:exon |
| GTAGTGCCATGGTGAATCTG+TGG | 0.713130 | 7_3:+72050405 | None:intergenic |
| GCACACAATATGTACCTCAG+TGG | 0.739190 | 7_3:-72047298 | Msa1121950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAGTATTATAAATAAAATT+AGG | + | chr7_3:72047606-72047625 | None:intergenic | 10.0% |
| !! | TACAAATAATCAAATATTTA+GGG | + | chr7_3:72050055-72050074 | None:intergenic | 10.0% |
| !! | AGTGAAAAAAAAAAATATTA+AGG | + | chr7_3:72050438-72050457 | None:intergenic | 10.0% |
| !!! | AATATTTTACAAAAATGAAT+GGG | + | chr7_3:72050548-72050567 | None:intergenic | 10.0% |
| !!! | AAATATTTTACAAAAATGAA+TGG | + | chr7_3:72050549-72050568 | None:intergenic | 10.0% |
| !!! | TTTGTACAAACTTTTTATAA+TGG | + | chr7_3:72048047-72048066 | None:intergenic | 15.0% |
| !!! | ATACTAATTGTTATTTCAAT+TGG | - | chr7_3:72048172-72048191 | Msa1121950:intron | 15.0% |
| !!! | TACTAATTGTTATTTCAATT+GGG | - | chr7_3:72048173-72048192 | Msa1121950:intron | 15.0% |
| !! | GTACAAATAATCAAATATTT+AGG | + | chr7_3:72050056-72050075 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTTTTCACTTGA+TGG | - | chr7_3:72050441-72050460 | Msa1121950:five_prime_UTR | 15.0% |
| !! | AAGAAGAAAATTAGAAAGTA+AGG | + | chr7_3:72046994-72047013 | None:intergenic | 20.0% |
| !! | GAATATAAACAAACACATTA+CGG | + | chr7_3:72047282-72047301 | None:intergenic | 20.0% |
| !! | ATGTGTTTGTTTATATTCAT+AGG | - | chr7_3:72047284-72047303 | Msa1121950:CDS | 20.0% |
| !! | ATTTGAATTGTTCATTAAAC+TGG | - | chr7_3:72047401-72047420 | Msa1121950:intron | 20.0% |
| !! | CAAATTATGCAATAAAATCA+AGG | + | chr7_3:72047657-72047676 | None:intergenic | 20.0% |
| !!! | TTTTAGTTGTAAACTATGAT+AGG | - | chr7_3:72047701-72047720 | Msa1121950:CDS | 20.0% |
| !! | CTAATAGTTAAATATCAGTT+AGG | + | chr7_3:72047973-72047992 | None:intergenic | 20.0% |
| !!! | ACTAATTGTTATTTCAATTG+GGG | - | chr7_3:72048174-72048193 | Msa1121950:intron | 20.0% |
| !!! | TAAAAAGCATTTATAGAAAG+AGG | + | chr7_3:72048217-72048236 | None:intergenic | 20.0% |
| !!! | TTTTAGAATTTTATGTGACT+AGG | - | chr7_3:72048232-72048251 | Msa1121950:CDS | 20.0% |
| !! | TACTATAATTAACATTGTTC+TGG | - | chr7_3:72048806-72048825 | Msa1121950:intron | 20.0% |
| !! | CATAAAAACAAGATAATGAA+TGG | + | chr7_3:72049171-72049190 | None:intergenic | 20.0% |
| !!! | CATTCATTATCTTGTTTTTA+TGG | - | chr7_3:72049169-72049188 | Msa1121950:intron | 20.0% |
| !! | CAAAATCTTATATTCCAATT+AGG | + | chr7_3:72050522-72050541 | None:intergenic | 20.0% |
| !! | CAAAATAATGACAATAACAA+TGG | + | chr7_3:72050583-72050602 | None:intergenic | 20.0% |
| !!! | CATTGTTATTGTCATTATTT+TGG | - | chr7_3:72050581-72050600 | Msa1121950:five_prime_UTR | 20.0% |
| !!! | TTATTGTCATTATTTTGGAA+GGG | - | chr7_3:72050586-72050605 | Msa1121950:five_prime_UTR | 20.0% |
| ! | TTTATATTCATAGGATTCTC+TGG | - | chr7_3:72047293-72047312 | Msa1121950:CDS | 25.0% |
| ! | ATTCAAATGAACAAAAAGAG+AGG | + | chr7_3:72047389-72047408 | None:intergenic | 25.0% |
| ! | ACAACTAAAAAATTCTTCAC+TGG | + | chr7_3:72047691-72047710 | None:intergenic | 25.0% |
| ! | TGAATTGAATTTGTAGTGTT+TGG | - | chr7_3:72047915-72047934 | Msa1121950:intron | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAT+CGG | - | chr7_3:72047927-72047946 | Msa1121950:intron | 25.0% |
| ! | ATTTATTATAGCAGCTCTTA+TGG | - | chr7_3:72048392-72048411 | Msa1121950:intron | 25.0% |
| !! | TAATATAGAGCACTATTTCT+TGG | - | chr7_3:72048575-72048594 | Msa1121950:intron | 25.0% |
| !!! | TGCTTCTTTGAAATCAAATT+TGG | + | chr7_3:72048691-72048710 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr7_3:72049066-72049085 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr7_3:72049083-72049102 | Msa1121950:intron | 25.0% |
| ! | AGACAAAGCTATAGTATAAA+TGG | + | chr7_3:72049411-72049430 | None:intergenic | 25.0% |
| ! | TAATATAGATTCAACTCTTC+AGG | - | chr7_3:72049581-72049600 | Msa1121950:intron | 25.0% |
| ! | TATAGCATGTTTACAATTAC+AGG | + | chr7_3:72049684-72049703 | None:intergenic | 25.0% |
| !! | AGAATTTGTTCTTGTTAACT+AGG | - | chr7_3:72049780-72049799 | Msa1121950:intron | 25.0% |
| !! | GTCATTACCTCTAAAAATAT+GGG | + | chr7_3:72049874-72049893 | None:intergenic | 25.0% |
| !! | TGTCATTACCTCTAAAAATA+TGG | + | chr7_3:72049875-72049894 | None:intergenic | 25.0% |
| !! | TTGTCTTTGTTGTAGAATTT+GGG | - | chr7_3:72050464-72050483 | Msa1121950:five_prime_UTR | 25.0% |
| !!! | GTTATTGTCATTATTTTGGA+AGG | - | chr7_3:72050585-72050604 | Msa1121950:five_prime_UTR | 25.0% |
| ! | ATTCCAAAATCCAAAAGTAA+GGG | + | chr7_3:72050658-72050677 | None:intergenic | 25.0% |
| ! | AATTCCAAAATCCAAAAGTA+AGG | + | chr7_3:72050659-72050678 | None:intergenic | 25.0% |
| !! | TAGTCATGCATATCTTTTAA+AGG | - | chr7_3:72050717-72050736 | Msa1121950:five_prime_UTR | 25.0% |
| ! | ATCATTTAAATCGTGTTTGT+TGG | + | chr7_3:72050756-72050775 | None:intergenic | 25.0% |
| ! | TTTAAATGATGACTTTGACT+AGG | - | chr7_3:72050766-72050785 | Msa1121950:five_prime_UTR | 25.0% |
| !!! | ATCTGGTTATGGTTTTGATA+CGG | + | chr7_3:72046955-72046974 | None:intergenic | 30.0% |
| ATTAGAAAGTAAGGTAGATC+CGG | + | chr7_3:72046985-72047004 | None:intergenic | 30.0% | |
| TATAAACAAACACATTACGG+CGG | + | chr7_3:72047279-72047298 | None:intergenic | 30.0% | |
| ATGAACAAAAAGAGAGGTTA+GGG | + | chr7_3:72047383-72047402 | None:intergenic | 30.0% | |
| AATGAACAAAAAGAGAGGTT+AGG | + | chr7_3:72047384-72047403 | None:intergenic | 30.0% | |
| GAATGATATAGAGAATGGTT+CGG | - | chr7_3:72047463-72047482 | Msa1121950:intron | 30.0% | |
| TTTATGGAAAGAAAACGACT+AGG | - | chr7_3:72047802-72047821 | Msa1121950:intron | 30.0% | |
| AAGTTCTTATGAGCTTGTAA+AGG | - | chr7_3:72048069-72048088 | Msa1121950:intron | 30.0% | |
| TCTATTCTATGTTTGCGTTA+TGG | - | chr7_3:72048325-72048344 | Msa1121950:intron | 30.0% | |
| !!! | AACCTTTTTTCATGCTAGAT+TGG | - | chr7_3:72048360-72048379 | Msa1121950:intron | 30.0% |
| !!! | ACCTTTTTTCATGCTAGATT+GGG | - | chr7_3:72048361-72048380 | Msa1121950:intron | 30.0% |
| AAGTGCCTTGATTATAATGA+CGG | - | chr7_3:72048455-72048474 | Msa1121950:intron | 30.0% | |
| ACTTACCGTCATTATAATCA+AGG | + | chr7_3:72048463-72048482 | None:intergenic | 30.0% | |
| ATTAATGAGAACAGAAAAGC+AGG | + | chr7_3:72048514-72048533 | None:intergenic | 30.0% | |
| ! | TGCTTTTCTGTTCTCATTAA+TGG | - | chr7_3:72048513-72048532 | Msa1121950:intron | 30.0% |
| !!! | TTTTTTACATTGTGCTGTGA+TGG | - | chr7_3:72048540-72048559 | Msa1121950:intron | 30.0% |
| GTTATTTGTTTGTGTCCATT+AGG | - | chr7_3:72048636-72048655 | Msa1121950:intron | 30.0% | |
| ! | AAAAGTACATGGAGTTAAAC+AGG | + | chr7_3:72048836-72048855 | None:intergenic | 30.0% |
| ! | AAACGTGTAACAAAAGTACA+TGG | + | chr7_3:72048847-72048866 | None:intergenic | 30.0% |
| ! | TTGTTGTTGTTGTTGTTGAA+TGG | + | chr7_3:72048951-72048970 | None:intergenic | 30.0% |
| TCTTTGATAGAACATTATGG+CGG | + | chr7_3:72049019-72049038 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr7_3:72049022-72049041 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr7_3:72049026-72049045 | Msa1121950:intron | 30.0% | |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr7_3:72049061-72049080 | Msa1121950:intron | 30.0% |
| GAAACTATCCATAGATCAAA+TGG | + | chr7_3:72049141-72049160 | None:intergenic | 30.0% | |
| CAAGATAATGAATGGAGATT+TGG | + | chr7_3:72049163-72049182 | None:intergenic | 30.0% | |
| GCGTATGACAAAAAAATGAT+AGG | + | chr7_3:72049247-72049266 | None:intergenic | 30.0% | |
| ! | GCAGTTCTTTATCTTTTCTT+CGG | - | chr7_3:72049265-72049284 | Msa1121950:intron | 30.0% |
| ! | CAGTTCTTTATCTTTTCTTC+GGG | - | chr7_3:72049266-72049285 | Msa1121950:intron | 30.0% |
| ! | TCTTTCTTCTGTGAAGATTT+TGG | + | chr7_3:72049325-72049344 | None:intergenic | 30.0% |
| ATCTTCACAGAAGAAAGAAA+TGG | - | chr7_3:72049327-72049346 | Msa1121950:intron | 30.0% | |
| ! | ATCTAGAATAAAGGAACTTG+AGG | + | chr7_3:72049461-72049480 | None:intergenic | 30.0% |
| TCAAGTTCCTTTATTCTAGA+TGG | - | chr7_3:72049460-72049479 | Msa1121950:intron | 30.0% | |
| ! | AAATGTGCCATCTAGAATAA+AGG | + | chr7_3:72049470-72049489 | None:intergenic | 30.0% |
| !! | ATTGTTGATGACACATTAGT+TGG | - | chr7_3:72049719-72049738 | Msa1121950:intron | 30.0% |
| TTAAAGAAAAGAGTCAAACG+TGG | - | chr7_3:72049748-72049767 | Msa1121950:intron | 30.0% | |
| ! | TAGGTTGAAGAAAAACTTGA+AGG | - | chr7_3:72049799-72049818 | Msa1121950:intron | 30.0% |
| !!! | TTGTACACCCATATTTTTAG+AGG | - | chr7_3:72049864-72049883 | Msa1121950:intron | 30.0% |
| TAACCACCGACAAAAATTAA+AGG | + | chr7_3:72050112-72050131 | None:intergenic | 30.0% | |
| GCAACACATAAAAATGCAAT+CGG | - | chr7_3:72050195-72050214 | Msa1121950:CDS | 30.0% | |
| AGCACTTGTATTAATCTAGA+GGG | + | chr7_3:72050374-72050393 | None:intergenic | 30.0% | |
| ! | GTTGTCTTTGTTGTAGAATT+TGG | - | chr7_3:72050463-72050482 | Msa1121950:five_prime_UTR | 30.0% |
| TGCATGACTATCTATTGAAA+TGG | + | chr7_3:72050707-72050726 | None:intergenic | 30.0% | |
| !! | TCATGCATATCTTTTAAAGG+TGG | - | chr7_3:72050720-72050739 | Msa1121950:five_prime_UTR | 30.0% |
| AAGTCGCAAAAACTCACAAA+AGG | - | chr7_3:72046799-72046818 | Msa1121950:three_prime_UTR | 35.0% | |
| GTGAATTGAAATGAAGGTGA+TGG | + | chr7_3:72046910-72046929 | None:intergenic | 35.0% | |
| GATTGCGTGAATTGAAATGA+AGG | + | chr7_3:72046916-72046935 | None:intergenic | 35.0% | |
| ATAAACAAACACATTACGGC+GGG | + | chr7_3:72047278-72047297 | None:intergenic | 35.0% | |
| GCGTTGAATGATATAGAGAA+TGG | - | chr7_3:72047458-72047477 | Msa1121950:intron | 35.0% | |
| ATCAATGATTCTCGTTAGTG+AGG | - | chr7_3:72047547-72047566 | Msa1121950:CDS | 35.0% | |
| AGCATGACGAATTTAGTTAG+AGG | - | chr7_3:72047724-72047743 | Msa1121950:CDS | 35.0% | |
| TAGTTAGAGGAAGCTCAAAT+TGG | - | chr7_3:72047737-72047756 | Msa1121950:CDS | 35.0% | |
| !! | ACGACTAGGTGTTATTGTTA+AGG | - | chr7_3:72047816-72047835 | Msa1121950:intron | 35.0% |
| !! | CGACTAGGTGTTATTGTTAA+GGG | - | chr7_3:72047817-72047836 | Msa1121950:intron | 35.0% |
| !! | GTGTTATTGTTAAGGGTGTT+TGG | - | chr7_3:72047824-72047843 | Msa1121950:intron | 35.0% |
| !!! | CCTTTTTTCATGCTAGATTG+GGG | - | chr7_3:72048362-72048381 | Msa1121950:intron | 35.0% |
| TGTGCATTCTGGATTCATAA+TGG | - | chr7_3:72048751-72048770 | Msa1121950:intron | 35.0% | |
| ATTATAGTAGCTTTCGTCAC+AGG | + | chr7_3:72048795-72048814 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTGAATGGAGATT+TGG | + | chr7_3:72048943-72048962 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr7_3:72049042-72049061 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr7_3:72049054-72049073 | None:intergenic | 35.0% | |
| ACTATCCATAGATCAAATGG+AGG | + | chr7_3:72049138-72049157 | None:intergenic | 35.0% | |
| AAATGGAGAGAATTGAACTG+TGG | + | chr7_3:72049394-72049413 | None:intergenic | 35.0% | |
| !! | CTATAGCTTTGTCTTTGTAC+AGG | - | chr7_3:72049417-72049436 | Msa1121950:intron | 35.0% |
| AACAGTTACTGTATTTGTGC+TGG | - | chr7_3:72049494-72049513 | Msa1121950:intron | 35.0% | |
| TAACATTTAAACAGCCATCG+AGG | + | chr7_3:72049548-72049567 | None:intergenic | 35.0% | |
| TAAACATGCTATAGCATGCA+GGG | - | chr7_3:72049691-72049710 | Msa1121950:intron | 35.0% | |
| GTTGAAGAAAAACTTGAAGG+TGG | - | chr7_3:72049802-72049821 | Msa1121950:intron | 35.0% | |
| AAAAACTTGAAGGTGGACAA+GGG | - | chr7_3:72049809-72049828 | Msa1121950:intron | 35.0% | |
| GACAAGGGAAAACTTCATTT+CGG | - | chr7_3:72049824-72049843 | Msa1121950:intron | 35.0% | |
| ! | TTTTAACATTCCTTGCTGAG+TGG | - | chr7_3:72049973-72049992 | Msa1121950:intron | 35.0% |
| TTTAACATTCCTTGCTGAGT+GGG | - | chr7_3:72049974-72049993 | Msa1121950:intron | 35.0% | |
| !! | CTCCAGCCTTTAATTTTTGT+CGG | - | chr7_3:72050103-72050122 | Msa1121950:intron | 35.0% |
| ATGAAGACAAAGAAAAGCCA+AGG | + | chr7_3:72050341-72050360 | None:intergenic | 35.0% | |
| ACTTGTATTAATCTAGAGGG+GGG | + | chr7_3:72050371-72050390 | None:intergenic | 35.0% | |
| CACTTGTATTAATCTAGAGG+GGG | + | chr7_3:72050372-72050391 | None:intergenic | 35.0% | |
| GCACTTGTATTAATCTAGAG+GGG | + | chr7_3:72050373-72050392 | None:intergenic | 35.0% | |
| CAGCACTTGTATTAATCTAG+AGG | + | chr7_3:72050375-72050394 | None:intergenic | 35.0% | |
| CTCTAGATTAATACAAGTGC+TGG | - | chr7_3:72050373-72050392 | Msa1121950:CDS | 35.0% | |
| !! | AGATTAATACAAGTGCTGGT+TGG | - | chr7_3:72050377-72050396 | Msa1121950:CDS | 35.0% |
| ATTAGGATCGAACTTTCCTA+GGG | + | chr7_3:72050505-72050524 | None:intergenic | 35.0% | |
| AATTAGGATCGAACTTTCCT+AGG | + | chr7_3:72050506-72050525 | None:intergenic | 35.0% | |
| TAGGAAAGTTCGATCCTAAT+TGG | - | chr7_3:72050505-72050524 | Msa1121950:five_prime_UTR | 35.0% | |
| !! | ACTCCCTTACTTTTGGATTT+TGG | - | chr7_3:72050652-72050671 | Msa1121950:five_prime_UTR | 35.0% |
| !! | GCATATCTTTTAAAGGTGGA+CGG | - | chr7_3:72050724-72050743 | Msa1121950:five_prime_UTR | 35.0% |
| GCACTACGATTCAACATCAA+TGG | - | chr7_3:72047151-72047170 | Msa1121950:three_prime_UTR | 40.0% | |
| TGAAAACGCGTAGAATGGAA+GGG | + | chr7_3:72047245-72047264 | None:intergenic | 40.0% | |
| ATGAAAACGCGTAGAATGGA+AGG | + | chr7_3:72047246-72047265 | None:intergenic | 40.0% | |
| ATGCATGAAAACGCGTAGAA+TGG | + | chr7_3:72047250-72047269 | None:intergenic | 40.0% | |
| TAAACAAACACATTACGGCG+GGG | + | chr7_3:72047277-72047296 | None:intergenic | 40.0% | |
| ! | TGCGAGTGATTTTTGTGAAC+AGG | - | chr7_3:72047433-72047452 | Msa1121950:intron | 40.0% |
| TTCGGTCATTTCTCTTAGCT+TGG | - | chr7_3:72047481-72047500 | Msa1121950:intron | 40.0% | |
| ! | TCTCTTAGCTTGGATTCTTC+TGG | - | chr7_3:72047491-72047510 | Msa1121950:intron | 40.0% |
| ! | ATCAGTGAAAGTGTGCGATA+CGG | - | chr7_3:72047764-72047783 | Msa1121950:intron | 40.0% |
| GAGTCAATGTGACGCATTTA+TGG | - | chr7_3:72047786-72047805 | Msa1121950:intron | 40.0% | |
| GGGTGTTTGGTAAAAAGTAG+TGG | - | chr7_3:72047837-72047856 | Msa1121950:intron | 40.0% | |
| CCCCAATCTAGCATGAAAAA+AGG | + | chr7_3:72048365-72048384 | None:intergenic | 40.0% | |
| ! | CCAGACAAGACAATTGACTT+AGG | + | chr7_3:72048429-72048448 | None:intergenic | 40.0% |
| CCTAAGTCAATTGTCTTGTC+TGG | - | chr7_3:72048426-72048445 | Msa1121950:intron | 40.0% | |
| ! | ATCTCGATGTCGTTGATAGA+AGG | + | chr7_3:72048612-72048631 | None:intergenic | 40.0% |
| GTCCATTAGGTACTTTCTAC+AGG | - | chr7_3:72048649-72048668 | Msa1121950:intron | 40.0% | |
| !! | GTCCTGTAGAAAGTACCTAA+TGG | + | chr7_3:72048654-72048673 | None:intergenic | 40.0% |
| TAGGTACTTTCTACAGGACT+AGG | - | chr7_3:72048655-72048674 | Msa1121950:intron | 40.0% | |
| TACTTTCTACAGGACTAGGA+AGG | - | chr7_3:72048659-72048678 | Msa1121950:intron | 40.0% | |
| ! | CATACAAATAGTGCTGCTAC+AGG | - | chr7_3:72048709-72048728 | Msa1121950:intron | 40.0% |
| GCTGCTACAGGTAAACTTAT+CGG | - | chr7_3:72048721-72048740 | Msa1121950:intron | 40.0% | |
| ATAATGGCTGAGTATGCACT+CGG | - | chr7_3:72048767-72048786 | Msa1121950:intron | 40.0% | |
| TTCTATCTATGCCTTGCTTC+TGG | - | chr7_3:72048894-72048913 | Msa1121950:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr7_3:72049113-72049132 | None:intergenic | 40.0% | |
| ACTCTCCTCCATTTGATCTA+TGG | - | chr7_3:72049130-72049149 | Msa1121950:CDS | 40.0% | |
| TTAATTGAGCTCTGCTCTCA+TGG | + | chr7_3:72049658-72049677 | None:intergenic | 40.0% | |
| GTAAACATGCTATAGCATGC+AGG | - | chr7_3:72049690-72049709 | Msa1121950:intron | 40.0% | |
| GAAAAACTTGAAGGTGGACA+AGG | - | chr7_3:72049808-72049827 | Msa1121950:intron | 40.0% | |
| AAGGGAAAACTTCATTTCGG+CGG | - | chr7_3:72049827-72049846 | Msa1121950:intron | 40.0% | |
| TTAACATTCCTTGCTGAGTG+GGG | - | chr7_3:72049975-72049994 | Msa1121950:intron | 40.0% | |
| TTACTGCAATTGTCGCAATC+TGG | + | chr7_3:72050010-72050029 | None:intergenic | 40.0% | |
| !! | TAGGGTGTTGAGTTAAGAGA+TGG | + | chr7_3:72050037-72050056 | None:intergenic | 40.0% |
| GGCTGGAGACAAAATCTATA+AGG | + | chr7_3:72050091-72050110 | None:intergenic | 40.0% | |
| CACCGACAAAAATTAAAGGC+TGG | + | chr7_3:72050108-72050127 | None:intergenic | 40.0% | |
| !! | CAGCCTTTAATTTTTGTCGG+TGG | - | chr7_3:72050106-72050125 | Msa1121950:intron | 40.0% |
| AAGAAAAGCCAAGGAAGAGA+AGG | + | chr7_3:72050332-72050351 | None:intergenic | 40.0% | |
| ! | TTCGAAGACTCCCTTACTTT+TGG | - | chr7_3:72050645-72050664 | Msa1121950:five_prime_UTR | 40.0% |
| AGCACGTTGAAACTGTAATG+TGG | - | chr7_3:72050680-72050699 | Msa1121950:five_prime_UTR | 40.0% | |
| AAAGTAGCAACAGCCGTGTT+TGG | - | chr7_3:72046859-72046878 | Msa1121950:three_prime_UTR | 45.0% | |
| AAGTAGCAACAGCCGTGTTT+GGG | - | chr7_3:72046860-72046879 | Msa1121950:three_prime_UTR | 45.0% | |
| AGTAAGGTAGATCCGGTAGT+GGG | + | chr7_3:72046978-72046997 | None:intergenic | 45.0% | |
| AAGTAAGGTAGATCCGGTAG+TGG | + | chr7_3:72046979-72046998 | None:intergenic | 45.0% | |
| GATGTTGAATCGTAGTGCCA+TGG | + | chr7_3:72047149-72047168 | None:intergenic | 45.0% | |
| GCAGAGGAGAAGAACGAAAA+CGG | + | chr7_3:72047185-72047204 | None:intergenic | 45.0% | |
| GAGGTTAGGGATGCTTACTT+TGG | + | chr7_3:72047370-72047389 | None:intergenic | 45.0% | |
| AGCTTGGATTCTTCTGGTGT+TGG | - | chr7_3:72047497-72047516 | Msa1121950:intron | 45.0% | |
| !!! | GTGCTGTGATGGACTGATTT+TGG | - | chr7_3:72048551-72048570 | Msa1121950:intron | 45.0% |
| ATCAGTGAACTCCAGAAGCA+AGG | + | chr7_3:72048908-72048927 | None:intergenic | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | - | chr7_3:72048972-72048991 | Msa1121950:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr7_3:72049119-72049138 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr7_3:72049129-72049148 | None:intergenic | 45.0% | |
| TACGACTGCTGTACATTGCT+TGG | - | chr7_3:72049290-72049309 | Msa1121950:intron | 45.0% | |
| ! | ATACTGACTAGTGACCTCGA+TGG | - | chr7_3:72049531-72049550 | Msa1121950:intron | 45.0% |
| AGTTTCCTTGTTACTCCACC+TGG | - | chr7_3:72049625-72049644 | Msa1121950:intron | 45.0% | |
| CAATTGTCGCAATCTGGCTA+CGG | + | chr7_3:72050004-72050023 | None:intergenic | 45.0% | |
| CAGCTGCACAAGGAAATTGA+AGG | + | chr7_3:72050175-72050194 | None:intergenic | 45.0% | |
| CTTCAATTTCCTTGTGCAGC+TGG | - | chr7_3:72050173-72050192 | Msa1121950:intron | 45.0% | |
| ACATATTGTGTGCCCTATGG+TGG | + | chr7_3:72050235-72050254 | None:intergenic | 45.0% | |
| GGTACATATTGTGTGCCCTA+TGG | + | chr7_3:72050238-72050257 | None:intergenic | 45.0% | |
| GCACACAATATGTACCTCAG+TGG | - | chr7_3:72050242-72050261 | Msa1121950:intron | 45.0% | |
| AATATGTACCTCAGTGGCAG+TGG | - | chr7_3:72050248-72050267 | Msa1121950:intron | 45.0% | |
| GTTGTATCTACCTACTCCCT+AGG | - | chr7_3:72050486-72050505 | Msa1121950:five_prime_UTR | 45.0% | |
| ATCGAACTTTCCTAGGGAGT+AGG | + | chr7_3:72050499-72050518 | None:intergenic | 45.0% | |
| TCAACGATGTGTGGAGAGAA+GGG | + | chr7_3:72050623-72050642 | None:intergenic | 45.0% | |
| TTCAACGATGTGTGGAGAGA+AGG | + | chr7_3:72050624-72050643 | None:intergenic | 45.0% | |
| CTTCGAAGTTCAACGATGTG+TGG | + | chr7_3:72050632-72050651 | None:intergenic | 45.0% | |
| AGTAGCAACAGCCGTGTTTG+GGG | - | chr7_3:72046861-72046880 | Msa1121950:three_prime_UTR | 50.0% | |
| CGATGCAAGATCCCCAAACA+CGG | + | chr7_3:72046875-72046894 | None:intergenic | 50.0% | |
| GTTTGGGGATCTTGCATCGA+AGG | - | chr7_3:72046876-72046895 | Msa1121950:three_prime_UTR | 50.0% | |
| CCATAACCAGATCCCACTAC+CGG | - | chr7_3:72046963-72046982 | Msa1121950:three_prime_UTR | 50.0% | |
| TGTGGCGGTTGAATTTGCGA+GGG | + | chr7_3:72047120-72047139 | None:intergenic | 50.0% | |
| GTAGTGCCATGGTGAATCTG+TGG | + | chr7_3:72047138-72047157 | None:intergenic | 50.0% | |
| AGGTTTGAACGACGAAGCAG+AGG | + | chr7_3:72047201-72047220 | None:intergenic | 50.0% | |
| AATGAAGCTGACCTGAGCGA+AGG | + | chr7_3:72047221-72047240 | None:intergenic | 50.0% | |
| TAGGGATGCTTACTTTGGCG+CGG | + | chr7_3:72047365-72047384 | None:intergenic | 50.0% | |
| TCGGCGATACTTGTGCATTC+TGG | - | chr7_3:72048740-72048759 | Msa1121950:intron | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr7_3:72048971-72048990 | Msa1121950:intron | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr7_3:72048973-72048992 | Msa1121950:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr7_3:72048977-72048996 | Msa1121950:intron | 50.0% | |
| AGTGACCAGGTGGAGTAACA+AGG | + | chr7_3:72049633-72049652 | None:intergenic | 50.0% | |
| TATGTGTTGCCAGCTGCACA+AGG | + | chr7_3:72050185-72050204 | None:intergenic | 50.0% | |
| AATGCAATCGGAGTAGCAGC+TGG | - | chr7_3:72050207-72050226 | Msa1121950:CDS | 50.0% | |
| ATGCAATCGGAGTAGCAGCT+GGG | - | chr7_3:72050208-72050227 | Msa1121950:CDS | 50.0% | |
| !! | CCGGTAGTGGGATCTGGTTA+TGG | + | chr7_3:72046966-72046985 | None:intergenic | 55.0% |
| !! | GTAGATCCGGTAGTGGGATC+TGG | + | chr7_3:72046972-72046991 | None:intergenic | 55.0% |
| CTGTGGCGGTTGAATTTGCG+AGG | + | chr7_3:72047121-72047140 | None:intergenic | 55.0% | |
| CAACCGCCACAGATTCACCA+TGG | - | chr7_3:72047129-72047148 | Msa1121950:three_prime_UTR | 55.0% | |
| GTGCCATGGTGAATCTGTGG+CGG | + | chr7_3:72047135-72047154 | None:intergenic | 55.0% | |
| CGTCGTTCAAACCTTCGCTC+AGG | - | chr7_3:72047207-72047226 | Msa1121950:CDS | 55.0% | |
| ! | ATTCTCTGGCTCACGACGAC+AGG | - | chr7_3:72047307-72047326 | Msa1121950:CDS | 55.0% |
| CACGACGACAGGCAAGAATC+CGG | - | chr7_3:72047318-72047337 | Msa1121950:CDS | 55.0% | |
| GCAAGAATCCGGTGGATCTG+TGG | - | chr7_3:72047329-72047348 | Msa1121950:CDS | 55.0% | |
| TCCGGTGGATCTGTGGATCT+CGG | - | chr7_3:72047336-72047355 | Msa1121950:CDS | 55.0% | |
| ACCGAGATCCACAGATCCAC+CGG | + | chr7_3:72047340-72047359 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr7_3:72048979-72048998 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr7_3:72048985-72049004 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr7_3:72048986-72049005 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr7_3:72048985-72049004 | Msa1121950:intron | 55.0% | |
| TCTCATGGCAAGTGACCAGG+TGG | + | chr7_3:72049643-72049662 | None:intergenic | 55.0% | |
| TGCTCTCATGGCAAGTGACC+AGG | + | chr7_3:72049646-72049665 | None:intergenic | 55.0% | |
| TGCAATCGGAGTAGCAGCTG+GGG | - | chr7_3:72050209-72050228 | Msa1121950:CDS | 55.0% | |
| ATGTACCTCAGTGGCAGTGG+TGG | - | chr7_3:72050251-72050270 | Msa1121950:intron | 55.0% | |
| TGTACCTCAGTGGCAGTGGT+GGG | - | chr7_3:72050252-72050271 | Msa1121950:intron | 55.0% | |
| ! | GAGGAAGCATGCTGGCATCT+AGG | - | chr7_3:72050274-72050293 | Msa1121950:intron | 55.0% |
| ! | GACAGTGGCTACAGAGCGTT+GGG | + | chr7_3:72050304-72050323 | None:intergenic | 55.0% |
| CAACGCTCTGTAGCCACTGT+CGG | - | chr7_3:72050303-72050322 | Msa1121950:intron | 55.0% | |
| GACGACAGGCAAGAATCCGG+TGG | - | chr7_3:72047321-72047340 | Msa1121950:CDS | 60.0% | |
| TACGGTCACCCCACTCAGCA+AGG | + | chr7_3:72049986-72050005 | None:intergenic | 60.0% | |
| TAGCAGCTGGGGCCACCATA+GGG | - | chr7_3:72050220-72050239 | Msa1121950:CDS | 60.0% | |
| ! | AGTGGTGGGAGGAAGCATGC+TGG | - | chr7_3:72050266-72050285 | Msa1121950:intron | 60.0% |
| CGACAGTGGCTACAGAGCGT+TGG | + | chr7_3:72050305-72050324 | None:intergenic | 60.0% | |
| GAAGAGAAGGCCACCGACAG+TGG | + | chr7_3:72050319-72050338 | None:intergenic | 60.0% | |
| GTCGGTGGCCTTCTCTTCCT+TGG | - | chr7_3:72050321-72050340 | Msa1121950:intron | 60.0% | |
| GTAGCAGCTGGGGCCACCAT+AGG | - | chr7_3:72050219-72050238 | Msa1121950:CDS | 65.0% | |
| ! | ACCTCAGTGGCAGTGGTGGG+AGG | - | chr7_3:72050255-72050274 | Msa1121950:intron | 65.0% |
| TCCTCCCACCACTGCCACTG+AGG | + | chr7_3:72050259-72050278 | None:intergenic | 65.0% | |
| CGCTCTGTAGCCACTGTCGG+TGG | - | chr7_3:72050306-72050325 | Msa1121950:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 72046748 | 72050814 | 72046748 | ID=Msa1121950;Name=Msa1121950 |
| chr7_3 | mRNA | 72046748 | 72050814 | 72046748 | ID=Msa1121950-mRNA-1;Parent=Msa1121950;Name=Msa1121950-mRNA-1;_AED=0.06;_eAED=0.06;_QI=400|1|1|1|1|1|9|431|284 |
| chr7_3 | exon | 72046748 | 72047370 | 72046748 | ID=Msa1121950-mRNA-1:exon:18632;Parent=Msa1121950-mRNA-1 |
| chr7_3 | exon | 72047537 | 72047596 | 72047537 | ID=Msa1121950-mRNA-1:exon:18631;Parent=Msa1121950-mRNA-1 |
| chr7_3 | exon | 72047677 | 72047760 | 72047677 | ID=Msa1121950-mRNA-1:exon:18630;Parent=Msa1121950-mRNA-1 |
| chr7_3 | exon | 72048208 | 72048293 | 72048208 | ID=Msa1121950-mRNA-1:exon:18629;Parent=Msa1121950-mRNA-1 |
| chr7_3 | exon | 72048832 | 72048904 | 72048832 | ID=Msa1121950-mRNA-1:exon:18628;Parent=Msa1121950-mRNA-1 |
| chr7_3 | exon | 72049086 | 72049184 | 72049086 | ID=Msa1121950-mRNA-1:exon:18627;Parent=Msa1121950-mRNA-1 |
| chr7_3 | exon | 72049994 | 72050107 | 72049994 | ID=Msa1121950-mRNA-1:exon:18626;Parent=Msa1121950-mRNA-1 |
| chr7_3 | exon | 72050191 | 72050256 | 72050191 | ID=Msa1121950-mRNA-1:exon:18625;Parent=Msa1121950-mRNA-1 |
| chr7_3 | exon | 72050334 | 72050814 | 72050334 | ID=Msa1121950-mRNA-1:exon:18624;Parent=Msa1121950-mRNA-1 |
| chr7_3 | five_prime_UTR | 72050415 | 72050814 | 72050415 | ID=Msa1121950-mRNA-1:five_prime_utr;Parent=Msa1121950-mRNA-1 |
| chr7_3 | CDS | 72050334 | 72050414 | 72050334 | ID=Msa1121950-mRNA-1:cds;Parent=Msa1121950-mRNA-1 |
| chr7_3 | CDS | 72050191 | 72050256 | 72050191 | ID=Msa1121950-mRNA-1:cds;Parent=Msa1121950-mRNA-1 |
| chr7_3 | CDS | 72049994 | 72050107 | 72049994 | ID=Msa1121950-mRNA-1:cds;Parent=Msa1121950-mRNA-1 |
| chr7_3 | CDS | 72049086 | 72049184 | 72049086 | ID=Msa1121950-mRNA-1:cds;Parent=Msa1121950-mRNA-1 |
| chr7_3 | CDS | 72048832 | 72048904 | 72048832 | ID=Msa1121950-mRNA-1:cds;Parent=Msa1121950-mRNA-1 |
| chr7_3 | CDS | 72048208 | 72048293 | 72048208 | ID=Msa1121950-mRNA-1:cds;Parent=Msa1121950-mRNA-1 |
| chr7_3 | CDS | 72047677 | 72047760 | 72047677 | ID=Msa1121950-mRNA-1:cds;Parent=Msa1121950-mRNA-1 |
| chr7_3 | CDS | 72047537 | 72047596 | 72047537 | ID=Msa1121950-mRNA-1:cds;Parent=Msa1121950-mRNA-1 |
| chr7_3 | CDS | 72047179 | 72047370 | 72047179 | ID=Msa1121950-mRNA-1:cds;Parent=Msa1121950-mRNA-1 |
| chr7_3 | three_prime_UTR | 72046748 | 72047178 | 72046748 | ID=Msa1121950-mRNA-1:three_prime_utr;Parent=Msa1121950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
