Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1122270 | XP_003624969.1 | 98.630 | 292 | 4 | 0 | 1 | 292 | 1 | 292 | 0.0 | 586 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1122270 | sp|Q9LET3|RBL20_ARATH | 73.038 | 293 | 78 | 1 | 1 | 292 | 1 | 293 | 9.59e-150 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1122270 | G7KQP7 | 98.630 | 292 | 4 | 0 | 1 | 292 | 1 | 292 | 0.0 | 586 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1122270 | Msa1160730 | 0.943065 | 2.352471e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1122270 | MtrunA17_Chr7g0256051 | 98.630 | 292 | 4 | 0 | 1 | 292 | 1 | 292 | 0.0 | 586 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1122270 | AT3G56740.1 | 73.038 | 293 | 78 | 1 | 1 | 292 | 1 | 293 | 9.75e-151 | 424 |
| Msa1122270 | AT2G41160.1 | 66.441 | 295 | 88 | 2 | 1 | 292 | 1 | 287 | 4.47e-139 | 394 |
| Msa1122270 | AT2G41160.2 | 68.712 | 163 | 51 | 0 | 1 | 163 | 1 | 163 | 1.33e-76 | 233 |
Find 117 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCACATTCACGTCGTTTC+TGG | 0.121166 | 7_3:-72634041 | None:intergenic |
| ACGAATTTCCTTGCCATCTA+TGG | 0.140196 | 7_3:+72633743 | Msa1122270:CDS |
| TTCCTTCCATAAACAAAATA+TGG | 0.187431 | 7_3:+72634097 | Msa1122270:three_prime_UTR |
| CACTTTGGGCTTGTCTTATC+AGG | 0.223156 | 7_3:+72629160 | Msa1122270:CDS |
| GTTTCTTACCGAGTGTTTAT+TGG | 0.239336 | 7_3:-72630064 | None:intergenic |
| AACGGGAATGTCAAAGAAAA+AGG | 0.260842 | 7_3:-72632746 | None:intergenic |
| TATTAACACCAGCACTAAAA+TGG | 0.262768 | 7_3:-72634262 | None:intergenic |
| TGTAGCTTCTACTGTCAAAA+TGG | 0.265379 | 7_3:+72632921 | Msa1122270:intron |
| TGTATCTGCTATATTACTTC+AGG | 0.275704 | 7_3:+72630019 | Msa1122270:CDS |
| CATCAGAGTAACATAGTTAA+TGG | 0.276649 | 7_3:-72634393 | None:intergenic |
| TTAATAGATCAATGAGAATT+AGG | 0.289480 | 7_3:+72634279 | Msa1122270:three_prime_UTR |
| TAAACAAAATATGGATTGTT+TGG | 0.299874 | 7_3:+72634106 | Msa1122270:three_prime_UTR |
| TTGCTCTGGCAGGATATCTT+TGG | 0.301829 | 7_3:+72629925 | Msa1122270:intron |
| GAAGACATTCAAACGGTATA+AGG | 0.315844 | 7_3:-72632987 | None:intergenic |
| TTCCCGTTTCAACACGGTTC+CGG | 0.316161 | 7_3:+72632761 | Msa1122270:CDS |
| CATATATCTAGCTGGTCTTC+AGG | 0.318381 | 7_3:+72632816 | Msa1122270:CDS |
| CAAGGTCGTTTCAACACTTT+GGG | 0.318841 | 7_3:+72629146 | Msa1122270:CDS |
| TACAAATTACTTTAAACATA+TGG | 0.321116 | 7_3:+72634309 | Msa1122270:three_prime_UTR |
| CGTCGTTTCTGGCCTGCACT+AGG | 0.335548 | 7_3:-72634030 | None:intergenic |
| CTAGTCACTCCTGGACCTTA+TGG | 0.354454 | 7_3:+72632700 | Msa1122270:CDS |
| AATCACAACCCTTGTTTCAA+TGG | 0.355279 | 7_3:+72633979 | Msa1122270:CDS |
| GGGATGTGTGGCATCCTTGC+CGG | 0.365193 | 7_3:+72632962 | Msa1122270:CDS |
| CAAGTCTTGATGTGAGGATT+GGG | 0.365948 | 7_3:+72634158 | Msa1122270:three_prime_UTR |
| TCAACACCCGAGTTGATGTT+TGG | 0.372056 | 7_3:+72629994 | Msa1122270:CDS |
| GCACAAATGAAGCAAATATA+AGG | 0.373363 | 7_3:-72632723 | None:intergenic |
| AGGGTATTTGAGAGACAAAT+TGG | 0.377821 | 7_3:+72630039 | Msa1122270:CDS |
| ATCCGGAACCGTGTTGAAAC+GGG | 0.381204 | 7_3:-72632763 | None:intergenic |
| CCAAGGTCGTTTCAACACTT+TGG | 0.385546 | 7_3:+72629145 | Msa1122270:CDS |
| CTTGCCTCCATTTGGCGAGC+TGG | 0.389639 | 7_3:-72633819 | None:intergenic |
| ATAAAATTACCTTTGCTTTG+CGG | 0.408479 | 7_3:-72633015 | None:intergenic |
| AATCCGGAACCGTGTTGAAA+CGG | 0.409263 | 7_3:-72632764 | None:intergenic |
| AACAACAACGAGGAATGTTA+TGG | 0.410813 | 7_3:+72633779 | Msa1122270:CDS |
| ATGATGAAAGCCCTTGTAAC+AGG | 0.411155 | 7_3:-72629089 | None:intergenic |
| ATTTATTTATTGTGTGTGAA+TGG | 0.412331 | 7_3:-72634464 | None:intergenic |
| CGAATTTCCTTGCCATCTAT+GGG | 0.414878 | 7_3:+72633744 | Msa1122270:CDS |
| ATCACAACCCTTGTTTCAAT+GGG | 0.418507 | 7_3:+72633980 | Msa1122270:CDS |
| TCAACACGGTTCCGGATTTG+TGG | 0.420358 | 7_3:+72632769 | Msa1122270:CDS |
| TCTTTGGAAAGCTTCGCATA+TGG | 0.424524 | 7_3:+72629941 | Msa1122270:CDS |
| AATATGAACGGAGGCCCATC+TGG | 0.425005 | 7_3:+72628902 | Msa1122270:exon |
| CGTTTGAATGAAAATTTGTT+CGG | 0.428392 | 7_3:-72628808 | None:intergenic |
| AAGTAAAACTTGCCTCCATT+TGG | 0.437456 | 7_3:-72633827 | None:intergenic |
| GAGTATTTCAACTCCTATTG+AGG | 0.455983 | 7_3:+72634201 | Msa1122270:three_prime_UTR |
| ACAAGTCTTGATGTGAGGAT+TGG | 0.459176 | 7_3:+72634157 | Msa1122270:three_prime_UTR |
| CAGCAAGTGCTCCTGTTACA+AGG | 0.462697 | 7_3:+72629078 | Msa1122270:intron |
| GTATCTGCTATATTACTTCA+GGG | 0.469006 | 7_3:+72630020 | Msa1122270:CDS |
| TTGTTTATGGAAGGAATTAG+TGG | 0.477540 | 7_3:-72634090 | None:intergenic |
| TTGCCTCCATTTGGCGAGCT+GGG | 0.478294 | 7_3:-72633818 | None:intergenic |
| TTCTACTGTCAAAATGGAAA+AGG | 0.478869 | 7_3:+72632927 | Msa1122270:CDS |
| TTATTGTGTGTGAATGGGTT+CGG | 0.480099 | 7_3:-72634458 | None:intergenic |
| ATGTTTAAAGTAATTTGTAC+AGG | 0.480336 | 7_3:-72634305 | None:intergenic |
| ACAACAACGAGGAATGTTAT+GGG | 0.480884 | 7_3:+72633780 | Msa1122270:CDS |
| GAAGCAAATATAAGGCCATA+AGG | 0.481302 | 7_3:-72632715 | None:intergenic |
| TGGAAAAGGTCCATGTTACC+AGG | 0.482508 | 7_3:+72632941 | Msa1122270:CDS |
| ATCCTACCCAGCTCGCCAAA+TGG | 0.485081 | 7_3:+72633812 | Msa1122270:CDS |
| TTTATTTATTGTGTGTGAAT+GGG | 0.487139 | 7_3:-72634463 | None:intergenic |
| TTGTTTCAATGGGATTTGAC+AGG | 0.492409 | 7_3:+72633990 | Msa1122270:CDS |
| ATTCAAACGGTATAAGGAAC+CGG | 0.492907 | 7_3:-72632981 | None:intergenic |
| CTTTGTGCAGAGAAACTATC+CGG | 0.494839 | 7_3:+72633919 | Msa1122270:intron |
| CATAAGGTCCAGGAGTGACT+AGG | 0.495943 | 7_3:-72632699 | None:intergenic |
| GTGCGTGGAGTCCCCATAGA+TGG | 0.497459 | 7_3:-72633756 | None:intergenic |
| ATACAAGAAAATTCAATAGC+AGG | 0.501316 | 7_3:-72634430 | None:intergenic |
| ACAATCTTCTTTGGGATCCA+AGG | 0.509043 | 7_3:+72629128 | Msa1122270:CDS |
| AGAAGTGGAAACCACAAATC+CGG | 0.517755 | 7_3:-72632780 | None:intergenic |
| CTCCATTTGGCGAGCTGGGT+AGG | 0.519162 | 7_3:-72633814 | None:intergenic |
| TCAACAACCCTAGTCACTCC+TGG | 0.520704 | 7_3:+72632691 | Msa1122270:CDS |
| TGTGGCAACAAACATCCTAC+TGG | 0.528754 | 7_3:+72634057 | Msa1122270:CDS |
| GTCGTTTCTGGCCTGCACTA+GGG | 0.529533 | 7_3:-72634029 | None:intergenic |
| AAGAATGATGAAATGAACTC+CGG | 0.532307 | 7_3:-72633717 | None:intergenic |
| TGAATGACTTATCTGAGAAG+TGG | 0.532500 | 7_3:-72632795 | None:intergenic |
| TGTTTATGGAAGGAATTAGT+GGG | 0.533877 | 7_3:-72634089 | None:intergenic |
| ACTGCAGAATGCGTTGGAGC+CGG | 0.536679 | 7_3:-72633938 | None:intergenic |
| TTCTTCACTGCGAATATGAA+CGG | 0.539489 | 7_3:+72628890 | Msa1122270:exon |
| AGAATGATGAAATGAACTCC+GGG | 0.548630 | 7_3:-72633716 | None:intergenic |
| ATTTGGCGAGCTGGGTAGGA+TGG | 0.551108 | 7_3:-72633810 | None:intergenic |
| AAGTCATTCATATATCTAGC+TGG | 0.554427 | 7_3:+72632808 | Msa1122270:CDS |
| GCAAGGATGCCACACATCCC+TGG | 0.554858 | 7_3:-72632959 | None:intergenic |
| ACTCTGATGAGTAGTGCTTA+CGG | 0.555425 | 7_3:+72634407 | Msa1122270:three_prime_UTR |
| AGCAAGTGCTCCTGTTACAA+GGG | 0.557156 | 7_3:+72629079 | Msa1122270:intron |
| GGAGTGACTAGGGTTGTTGA+AGG | 0.558621 | 7_3:-72632688 | None:intergenic |
| TTCCTCGTTGTTGTTGTGCG+TGG | 0.564527 | 7_3:-72633771 | None:intergenic |
| TGTCAAATCCCATTGAAACA+AGG | 0.565140 | 7_3:-72633988 | None:intergenic |
| TATTCGCAGTGAAGAAGAAG+AGG | 0.566376 | 7_3:-72628883 | None:intergenic |
| AATATAAGGCCATAAGGTCC+AGG | 0.569522 | 7_3:-72632709 | None:intergenic |
| TGCCAGACAAGCCCTAGTGC+AGG | 0.571319 | 7_3:+72634018 | Msa1122270:CDS |
| ATAAGGTCCAGGAGTGACTA+GGG | 0.576095 | 7_3:-72632698 | None:intergenic |
| TCCATGTTACCAGGGATGTG+TGG | 0.577711 | 7_3:+72632950 | Msa1122270:CDS |
| GTCAAATCCCATTGAAACAA+GGG | 0.578126 | 7_3:-72633987 | None:intergenic |
| GGCCAGAAACGACGTGAATG+TGG | 0.583853 | 7_3:+72634039 | Msa1122270:CDS |
| AAATAGTAGTGAGGATAACA+TGG | 0.585490 | 7_3:-72630259 | None:intergenic |
| GTTGTGATTGAGTCCTCTGA+TGG | 0.587631 | 7_3:-72633965 | None:intergenic |
| CCTCACATCAAGACTTGTTG+AGG | 0.587775 | 7_3:-72634152 | None:intergenic |
| CCAAAGTGTTGAAACGACCT+TGG | 0.592907 | 7_3:-72629145 | None:intergenic |
| AATAGGAGTTGAAATACTCA+AGG | 0.594986 | 7_3:-72634197 | None:intergenic |
| CTTCTATATCCGCAAAGCAA+AGG | 0.596306 | 7_3:+72633006 | Msa1122270:CDS |
| CAACTCGGGTGTTGATGTGA+AGG | 0.600481 | 7_3:-72629986 | None:intergenic |
| TGGAGTCCCCATAGATGGCA+AGG | 0.600546 | 7_3:-72633751 | None:intergenic |
| CTACCCAGCTCGCCAAATGG+AGG | 0.609762 | 7_3:+72633815 | Msa1122270:CDS |
| TACAATCCAAACATCAACTC+GGG | 0.610315 | 7_3:-72630000 | None:intergenic |
| TTGACATTCCCGTTTCAACA+CGG | 0.614729 | 7_3:+72632755 | Msa1122270:CDS |
| ATGAACGTACTGAAACCAGA+TGG | 0.615760 | 7_3:-72628917 | None:intergenic |
| CATCAAGACTTGTTGAGGAG+TGG | 0.616531 | 7_3:-72634147 | None:intergenic |
| AAGTCTTGATGTGAGGATTG+GGG | 0.637862 | 7_3:+72634159 | Msa1122270:three_prime_UTR |
| AGTGGGACTGAGCCTCCAGT+AGG | 0.638593 | 7_3:-72634072 | None:intergenic |
| GGATATAGAAGACATTCAAA+CGG | 0.639224 | 7_3:-72632994 | None:intergenic |
| CCTCAACAAGTCTTGATGTG+AGG | 0.639425 | 7_3:+72634152 | Msa1122270:three_prime_UTR |
| TGAACGTACTGAAACCAGAT+GGG | 0.647169 | 7_3:-72628916 | None:intergenic |
| AATTGGTTCCAATAAACACT+CGG | 0.650758 | 7_3:+72630056 | Msa1122270:CDS |
| ATACAATCCAAACATCAACT+CGG | 0.655682 | 7_3:-72630001 | None:intergenic |
| GGAAAAGGTCCATGTTACCA+GGG | 0.656589 | 7_3:+72632942 | Msa1122270:CDS |
| AACTACTTCAAATAGTAGTG+AGG | 0.659587 | 7_3:-72630268 | None:intergenic |
| TTCTGCAGTAGAACCATCAG+AGG | 0.659637 | 7_3:+72633952 | Msa1122270:CDS |
| GAATTTCCTTGCCATCTATG+GGG | 0.660257 | 7_3:+72633745 | Msa1122270:CDS |
| AACGGTATAAGGAACCGGCA+AGG | 0.663752 | 7_3:-72632976 | None:intergenic |
| CAACAACGAGGAATGTTATG+GGG | 0.670477 | 7_3:+72633781 | Msa1122270:CDS |
| GGCAACAAACATCCTACTGG+AGG | 0.680331 | 7_3:+72634060 | Msa1122270:CDS |
| TTCACTGCGAATATGAACGG+AGG | 0.707515 | 7_3:+72628893 | Msa1122270:exon |
| CTCCACGCACAACAACAACG+AGG | 0.778347 | 7_3:+72633769 | Msa1122270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTATTAACTAAACAAA+GGG | - | chr7_3:72629356-72629375 | None:intergenic | 10.0% |
| !!! | TACTTTAATTCATATTTTTA+TGG | + | chr7_3:72630968-72630987 | Msa1122270:intron | 10.0% |
| !! | ATATCTAAAAATTAAAGTTA+AGG | - | chr7_3:72634240-72634259 | None:intergenic | 10.0% |
| !! | AAATTGAAAACAACAAAAAA+GGG | - | chr7_3:72628983-72629002 | None:intergenic | 15.0% |
| !! | AAAATTGAAAACAACAAAAA+AGG | - | chr7_3:72628984-72629003 | None:intergenic | 15.0% |
| !! | AAATTATTAACTAAACAAAG+GGG | - | chr7_3:72629355-72629374 | None:intergenic | 15.0% |
| !! | CAAAATTATTAACTAAACAA+AGG | - | chr7_3:72629357-72629376 | None:intergenic | 15.0% |
| !! | TGTATAACTTAGTTAAAAAT+TGG | - | chr7_3:72629409-72629428 | None:intergenic | 15.0% |
| !!! | TAAGTTATACAATTACTTTT+AGG | + | chr7_3:72629418-72629437 | Msa1122270:intron | 15.0% |
| !!! | AAACTTGTTAGTTTATATTT+AGG | + | chr7_3:72630083-72630102 | Msa1122270:intron | 15.0% |
| !! | ATAGCAATTAGATATATAAA+AGG | - | chr7_3:72630170-72630189 | None:intergenic | 15.0% |
| !! | GCATTAATATTTCATTTAAA+GGG | - | chr7_3:72630591-72630610 | None:intergenic | 15.0% |
| !! | AGCATTAATATTTCATTTAA+AGG | - | chr7_3:72630592-72630611 | None:intergenic | 15.0% |
| !! | ATGAAAATTTAAAGAGATAT+TGG | + | chr7_3:72631087-72631106 | Msa1122270:intron | 15.0% |
| !! | TAATACTTAAAATACTGAAT+GGG | + | chr7_3:72631260-72631279 | Msa1122270:intron | 15.0% |
| !! | CAATCAAATATATGTAAAAT+AGG | + | chr7_3:72631506-72631525 | Msa1122270:intron | 15.0% |
| !! | TCATATAATTTGACATTAAT+TGG | - | chr7_3:72633168-72633187 | None:intergenic | 15.0% |
| !! | TATTTGAAAGATTTCAAATT+TGG | - | chr7_3:72633391-72633410 | None:intergenic | 15.0% |
| !! | TACAAATTACTTTAAACATA+TGG | + | chr7_3:72634309-72634328 | Msa1122270:three_prime_UTR | 15.0% |
| !!! | TTTTGTTACAAAGTGTTTTT+TGG | + | chr7_3:72629001-72629020 | Msa1122270:intron | 20.0% |
| !! | TGAAAAAGGAAAAATCAAAT+CGG | - | chr7_3:72629188-72629207 | None:intergenic | 20.0% |
| !!! | CAAAAGCATTAAAATGAAAA+AGG | - | chr7_3:72629202-72629221 | None:intergenic | 20.0% |
| !! | AATTATTAACTAAACAAAGG+GGG | - | chr7_3:72629354-72629373 | None:intergenic | 20.0% |
| !! | GAAAAAGTTAAGTAAATCAA+CGG | - | chr7_3:72629614-72629633 | None:intergenic | 20.0% |
| !!! | ATTTACTTAACTTTTTCTCT+TGG | + | chr7_3:72629617-72629636 | Msa1122270:intron | 20.0% |
| !!! | GTATAAATGCTATGATTTTA+TGG | + | chr7_3:72629688-72629707 | Msa1122270:intron | 20.0% |
| !!! | CTTGTTTTTAATTTACATTC+TGG | + | chr7_3:72629713-72629732 | Msa1122270:intron | 20.0% |
| !!! | TATTCTAATTGTACCTTTTA+TGG | + | chr7_3:72630187-72630206 | Msa1122270:intron | 20.0% |
| !!! | ATTCTAATTGTACCTTTTAT+GGG | + | chr7_3:72630188-72630207 | Msa1122270:intron | 20.0% |
| !! | TTAATATTTCATTTAAAGGG+AGG | - | chr7_3:72630588-72630607 | None:intergenic | 20.0% |
| !! | ATATGTAATTGTTAAGTAGT+TGG | + | chr7_3:72630808-72630827 | Msa1122270:intron | 20.0% |
| !!! | ATTCATATTTTTATGGAAGA+AGG | + | chr7_3:72630975-72630994 | Msa1122270:intron | 20.0% |
| !!! | ATTAATTTGATTTTAGACCA+AGG | + | chr7_3:72631035-72631054 | Msa1122270:intron | 20.0% |
| !! | GTAATACTTAAAATACTGAA+TGG | + | chr7_3:72631259-72631278 | Msa1122270:intron | 20.0% |
| !! | AATACTTAAAATACTGAATG+GGG | + | chr7_3:72631261-72631280 | Msa1122270:intron | 20.0% |
| !! | AACAGAAAAGAGAAAAAATA+AGG | - | chr7_3:72631379-72631398 | None:intergenic | 20.0% |
| !! | ATAGGATTTCTGTTTAATAA+CGG | + | chr7_3:72631574-72631593 | Msa1122270:intron | 20.0% |
| !! | TTGGAGATAAAATAATTTCT+AGG | + | chr7_3:72631908-72631927 | Msa1122270:intron | 20.0% |
| !! | TTAAAAAAATCAGTATCTAC+AGG | - | chr7_3:72632528-72632547 | None:intergenic | 20.0% |
| !! | GAACAGAACTTTAAATATTA+AGG | - | chr7_3:72632614-72632633 | None:intergenic | 20.0% |
| !!! | GTTTCATTATCTTAGTTTTT+AGG | + | chr7_3:72633045-72633064 | Msa1122270:intron | 20.0% |
| !!! | TTTTAGGAACTATGTTTTTA+TGG | + | chr7_3:72633061-72633080 | Msa1122270:intron | 20.0% |
| !! | AATTCTGACTATATCTATAT+AGG | - | chr7_3:72633112-72633131 | None:intergenic | 20.0% |
| !! | TAGAAGTTTGATATTAATGA+TGG | - | chr7_3:72633229-72633248 | None:intergenic | 20.0% |
| !! | TTAAATATGCATCATATAGT+TGG | - | chr7_3:72633349-72633368 | None:intergenic | 20.0% |
| !!! | CATATTTAAACATTGTTTCT+TGG | + | chr7_3:72633360-72633379 | Msa1122270:intron | 20.0% |
| !!! | CTATACTATAACTCTTTTTA+TGG | + | chr7_3:72633855-72633874 | Msa1122270:intron | 20.0% |
| !!! | AACAATCCATATTTTGTTTA+TGG | - | chr7_3:72634106-72634125 | None:intergenic | 20.0% |
| !!! | TAAACAAAATATGGATTGTT+TGG | + | chr7_3:72634106-72634125 | Msa1122270:three_prime_UTR | 20.0% |
| !! | TTAATAGATCAATGAGAATT+AGG | + | chr7_3:72634279-72634298 | Msa1122270:three_prime_UTR | 20.0% |
| !!! | ATGTTTAAAGTAATTTGTAC+AGG | - | chr7_3:72634308-72634327 | None:intergenic | 20.0% |
| !! | TTTATTTATTGTGTGTGAAT+GGG | - | chr7_3:72634466-72634485 | None:intergenic | 20.0% |
| !! | ATTTATTTATTGTGTGTGAA+TGG | - | chr7_3:72634467-72634486 | None:intergenic | 20.0% |
| !! | CGTTTGAATGAAAATTTGTT+CGG | - | chr7_3:72628811-72628830 | None:intergenic | 25.0% |
| ! | CAAAAAAGGGAAAAATGAAA+GGG | - | chr7_3:72628970-72628989 | None:intergenic | 25.0% |
| ! | ACAAAAAAGGGAAAAATGAA+AGG | - | chr7_3:72628971-72628990 | None:intergenic | 25.0% |
| !!! | TTTAATTTACATTCTGGTTC+AGG | + | chr7_3:72629719-72629738 | Msa1122270:intron | 25.0% |
| !! | ATATTATAACTTGTAAGCAC+TGG | + | chr7_3:72629846-72629865 | Msa1122270:intron | 25.0% |
| !! | TTCTAATTGTACCTTTTATG+GGG | + | chr7_3:72630189-72630208 | Msa1122270:intron | 25.0% |
| ! | ATATTTCAAAACCCCATAAA+AGG | - | chr7_3:72630203-72630222 | None:intergenic | 25.0% |
| ! | CAAAAATAGTCAAGAAAACT+CGG | - | chr7_3:72630447-72630466 | None:intergenic | 25.0% |
| ! | TCTATATCTCAATTCTCAAT+AGG | - | chr7_3:72630853-72630872 | None:intergenic | 25.0% |
| ! | TTGAGAATTGAGATATAGAT+TGG | + | chr7_3:72630854-72630873 | Msa1122270:intron | 25.0% |
| ! | AAAGCTGTTTAATGAAATTG+AGG | + | chr7_3:72630907-72630926 | Msa1122270:intron | 25.0% |
| ! | TAACAAGTAAATTACTTCTG+TGG | - | chr7_3:72631068-72631087 | None:intergenic | 25.0% |
| ! | CTTACAAATCAATAAGAACA+GGG | - | chr7_3:72631147-72631166 | None:intergenic | 25.0% |
| ! | TCTTACAAATCAATAAGAAC+AGG | - | chr7_3:72631148-72631167 | None:intergenic | 25.0% |
| ! | AAAATAAGGAAAGAATGTGA+AGG | - | chr7_3:72631365-72631384 | None:intergenic | 25.0% |
| ! | ATAGACTCTTATTGATCAAT+GGG | - | chr7_3:72631420-72631439 | None:intergenic | 25.0% |
| ! | AAAAACAAAATCTTGACCTT+TGG | - | chr7_3:72631785-72631804 | None:intergenic | 25.0% |
| ! | TCAATTTAGAAGAGATGAAT+TGG | - | chr7_3:72631815-72631834 | None:intergenic | 25.0% |
| ! | AAGCATAAGTTTATAATGCT+TGG | - | chr7_3:72632302-72632321 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTCATGAGTTGAA+TGG | - | chr7_3:72632891-72632910 | None:intergenic | 25.0% |
| ! | ATAAAATTACCTTTGCTTTG+CGG | - | chr7_3:72633018-72633037 | None:intergenic | 25.0% |
| ! | GAAGTATATCAATGAATGAA+TGG | - | chr7_3:72633284-72633303 | None:intergenic | 25.0% |
| ! | GATTCTTCATGAACATTTAT+AGG | + | chr7_3:72633514-72633533 | Msa1122270:intron | 25.0% |
| !! | CATTTATAGGATTTAAGACT+AGG | + | chr7_3:72633527-72633546 | Msa1122270:intron | 25.0% |
| ! | TTCCTTCCATAAACAAAATA+TGG | + | chr7_3:72634097-72634116 | Msa1122270:three_prime_UTR | 25.0% |
| !!! | ATCCATATTTTGTTTATGGA+AGG | - | chr7_3:72634102-72634121 | None:intergenic | 25.0% |
| !!! | ATTGTTTGGAATTTTGATGA+TGG | + | chr7_3:72634120-72634139 | Msa1122270:three_prime_UTR | 25.0% |
| ! | ATACAAGAAAATTCAATAGC+AGG | - | chr7_3:72634433-72634452 | None:intergenic | 25.0% |
| TTCAATGTAATCACATGTGT+CGG | - | chr7_3:72629501-72629520 | None:intergenic | 30.0% | |
| GTGTTTATGGTTCATAAGTT+AGG | + | chr7_3:72629561-72629580 | Msa1122270:intron | 30.0% | |
| TAATCAGTGAACAAATCTGA+TGG | + | chr7_3:72629660-72629679 | Msa1122270:intron | 30.0% | |
| AATCAGTGAACAAATCTGAT+GGG | + | chr7_3:72629661-72629680 | Msa1122270:intron | 30.0% | |
| ATACAATCCAAACATCAACT+CGG | - | chr7_3:72630004-72630023 | None:intergenic | 30.0% | |
| TGTATCTGCTATATTACTTC+AGG | + | chr7_3:72630019-72630038 | Msa1122270:CDS | 30.0% | |
| GTATCTGCTATATTACTTCA+GGG | + | chr7_3:72630020-72630039 | Msa1122270:CDS | 30.0% | |
| ! | AATTGGTTCCAATAAACACT+CGG | + | chr7_3:72630056-72630075 | Msa1122270:CDS | 30.0% |
| AAATAGTAGTGAGGATAACA+TGG | - | chr7_3:72630262-72630281 | None:intergenic | 30.0% | |
| AACTACTTCAAATAGTAGTG+AGG | - | chr7_3:72630271-72630290 | None:intergenic | 30.0% | |
| !! | GAAAGGTATTCTTCTCAATT+TGG | + | chr7_3:72630305-72630324 | Msa1122270:intron | 30.0% |
| GACATGCACATTCAAATATA+TGG | - | chr7_3:72630404-72630423 | None:intergenic | 30.0% | |
| CACTTAACTGACATTTGAAA+AGG | - | chr7_3:72630523-72630542 | None:intergenic | 30.0% | |
| TTTCAAATGTCAGTTAAGTG+TGG | + | chr7_3:72630523-72630542 | Msa1122270:intron | 30.0% | |
| !! | TAAACGGTTATCAGTTTTAG+AGG | + | chr7_3:72630560-72630579 | Msa1122270:intron | 30.0% |
| TAAAGGGCAAAAAACAACTT+GGG | - | chr7_3:72630702-72630721 | None:intergenic | 30.0% | |
| TTAAAGGGCAAAAAACAACT+TGG | - | chr7_3:72630703-72630722 | None:intergenic | 30.0% | |
| CTAGTGAATAGGCTATTAAA+GGG | - | chr7_3:72630718-72630737 | None:intergenic | 30.0% | |
| TCTAGTGAATAGGCTATTAA+AGG | - | chr7_3:72630719-72630738 | None:intergenic | 30.0% | |
| TAATAGCCTATTCACTAGAA+AGG | + | chr7_3:72630720-72630739 | Msa1122270:intron | 30.0% | |
| ! | AAAAGTACACCCTTTATCTT+AGG | + | chr7_3:72630749-72630768 | Msa1122270:intron | 30.0% |
| AATTGTTAAGTAGTTGGACT+TGG | + | chr7_3:72630814-72630833 | Msa1122270:intron | 30.0% | |
| !! | AATTTGATTTTAGACCAAGG+AGG | + | chr7_3:72631038-72631057 | Msa1122270:intron | 30.0% |
| ! | TTTGTAAGAAGCATACAGAA+AGG | + | chr7_3:72631159-72631178 | Msa1122270:intron | 30.0% |
| AGTATGAAGAGAAATTCCAT+TGG | + | chr7_3:72631328-72631347 | Msa1122270:intron | 30.0% | |
| GATAGACTCTTATTGATCAA+TGG | - | chr7_3:72631421-72631440 | None:intergenic | 30.0% | |
| TTTGCAACATTGAGCATATT+TGG | - | chr7_3:72631644-72631663 | None:intergenic | 30.0% | |
| AAATATGCTCAATGTTGCAA+AGG | + | chr7_3:72631643-72631662 | Msa1122270:intron | 30.0% | |
| !! | ATTTTAGTAGTTCCTTGACA+TGG | + | chr7_3:72631742-72631761 | Msa1122270:intron | 30.0% |
| ! | TTTTAGTAGTTCCTTGACAT+GGG | + | chr7_3:72631743-72631762 | Msa1122270:intron | 30.0% |
| TATGTATTCTTTAAGCCCAA+AGG | + | chr7_3:72631867-72631886 | Msa1122270:intron | 30.0% | |
| ATGTATTCTTTAAGCCCAAA+GGG | + | chr7_3:72631868-72631887 | Msa1122270:intron | 30.0% | |
| GCTCTTTAATAACACTCATT+TGG | - | chr7_3:72632037-72632056 | None:intergenic | 30.0% | |
| TCGAATAGCAGTTATTATAG+CGG | + | chr7_3:72632148-72632167 | Msa1122270:intron | 30.0% | |
| ! | CTATTAACATTGATGACTAG+CGG | + | chr7_3:72632173-72632192 | Msa1122270:intron | 30.0% |
| CTTTCTAAATGAAGACGATT+TGG | - | chr7_3:72632241-72632260 | None:intergenic | 30.0% | |
| TTCATTTAGAAAGTCATCCA+AGG | + | chr7_3:72632248-72632267 | Msa1122270:intron | 30.0% | |
| CAAATCCACAAAACAATCAT+TGG | + | chr7_3:72632381-72632400 | Msa1122270:intron | 30.0% | |
| !! | CATAACCAATGATTGTTTTG+TGG | - | chr7_3:72632389-72632408 | None:intergenic | 30.0% |
| ! | CAAAACAATCATTGGTTATG+AGG | + | chr7_3:72632389-72632408 | Msa1122270:intron | 30.0% |
| ATCCTATCAACAAGTTTGAA+TGG | + | chr7_3:72632417-72632436 | Msa1122270:intron | 30.0% | |
| !! | TACCATTCAAACTTGTTGAT+AGG | - | chr7_3:72632422-72632441 | None:intergenic | 30.0% |
| AATTCTTGCGTAATATGTGT+TGG | - | chr7_3:72632482-72632501 | None:intergenic | 30.0% | |
| CATATTACGCAAGAATTTGA+TGG | + | chr7_3:72632485-72632504 | Msa1122270:intron | 30.0% | |
| GCACAAATGAAGCAAATATA+AGG | - | chr7_3:72632726-72632745 | None:intergenic | 30.0% | |
| AAGTCATTCATATATCTAGC+TGG | + | chr7_3:72632808-72632827 | Msa1122270:CDS | 30.0% | |
| TTCTACTGTCAAAATGGAAA+AGG | + | chr7_3:72632927-72632946 | Msa1122270:CDS | 30.0% | |
| GGATATAGAAGACATTCAAA+CGG | - | chr7_3:72632997-72633016 | None:intergenic | 30.0% | |
| ATGTTCATGAAGAATCATGA+TGG | - | chr7_3:72633510-72633529 | None:intergenic | 30.0% | |
| !! | CATTTAGTTTGCAGCTAAAA+GGG | - | chr7_3:72633562-72633581 | None:intergenic | 30.0% |
| AAGAATGATGAAATGAACTC+CGG | - | chr7_3:72633720-72633739 | None:intergenic | 30.0% | |
| TGTTTATGGAAGGAATTAGT+GGG | - | chr7_3:72634092-72634111 | None:intergenic | 30.0% | |
| TTGTTTATGGAAGGAATTAG+TGG | - | chr7_3:72634093-72634112 | None:intergenic | 30.0% | |
| !!! | TTTGGAATTTTGATGATGGA+AGG | + | chr7_3:72634124-72634143 | Msa1122270:three_prime_UTR | 30.0% |
| AATAGGAGTTGAAATACTCA+AGG | - | chr7_3:72634200-72634219 | None:intergenic | 30.0% | |
| TGAGAAAAATGATCCTCAAT+AGG | - | chr7_3:72634217-72634236 | None:intergenic | 30.0% | |
| !! | AGATATATCCATTTTAGTGC+TGG | + | chr7_3:72634254-72634273 | Msa1122270:three_prime_UTR | 30.0% |
| TATTAACACCAGCACTAAAA+TGG | - | chr7_3:72634265-72634284 | None:intergenic | 30.0% | |
| ! | GTGCTTTTAAATAAACTGCA+TGG | - | chr7_3:72634369-72634388 | None:intergenic | 30.0% |
| CATCAGAGTAACATAGTTAA+TGG | - | chr7_3:72634396-72634415 | None:intergenic | 30.0% | |
| !! | AGCTACGACTTTTTCTTCTT+CGG | - | chr7_3:72628861-72628880 | None:intergenic | 35.0% |
| TTCTTCACTGCGAATATGAA+CGG | + | chr7_3:72628890-72628909 | Msa1122270:exon | 35.0% | |
| GGTGTGTGAAAATTGAAGAA+GGG | - | chr7_3:72628949-72628968 | None:intergenic | 35.0% | |
| ! | CGCTTTTCACAATCTTCTTT+GGG | + | chr7_3:72629120-72629139 | Msa1122270:CDS | 35.0% |
| TAGCTTACACTTCTAATCGT+AGG | + | chr7_3:72629445-72629464 | Msa1122270:intron | 35.0% | |
| CATAAACACAGACAAAGACA+CGG | - | chr7_3:72629550-72629569 | None:intergenic | 35.0% | |
| TTTCTCTTGGAGTTGTAACA+AGG | + | chr7_3:72629630-72629649 | Msa1122270:intron | 35.0% | |
| TTCTCTTGGAGTTGTAACAA+GGG | + | chr7_3:72629631-72629650 | Msa1122270:intron | 35.0% | |
| TGTGAAAAATGTCAGAGTTC+CGG | - | chr7_3:72629877-72629896 | None:intergenic | 35.0% | |
| TACAATCCAAACATCAACTC+GGG | - | chr7_3:72630003-72630022 | None:intergenic | 35.0% | |
| ! | AGGGTATTTGAGAGACAAAT+TGG | + | chr7_3:72630039-72630058 | Msa1122270:CDS | 35.0% |
| GTTTCTTACCGAGTGTTTAT+TGG | - | chr7_3:72630067-72630086 | None:intergenic | 35.0% | |
| ACATTACATCAGCAAGAACT+TGG | - | chr7_3:72630146-72630165 | None:intergenic | 35.0% | |
| CAGAACAAGATGTCAATGAA+AGG | + | chr7_3:72630661-72630680 | Msa1122270:intron | 35.0% | |
| ACAAGATGTCAATGAAAGGT+TGG | + | chr7_3:72630665-72630684 | Msa1122270:intron | 35.0% | |
| CTCCTGAATCCTAAGATAAA+GGG | - | chr7_3:72630761-72630780 | None:intergenic | 35.0% | |
| !! | TAGATTGGTCTAGAAGAGAA+TGG | + | chr7_3:72630869-72630888 | Msa1122270:intron | 35.0% |
| CTAGAAGAGAATGGTATAAG+AGG | + | chr7_3:72630878-72630897 | Msa1122270:intron | 35.0% | |
| TGAAAATGACTTGACCAACA+TGG | + | chr7_3:72631115-72631134 | Msa1122270:intron | 35.0% | |
| GAAAATGACTTGACCAACAT+GGG | + | chr7_3:72631116-72631135 | Msa1122270:intron | 35.0% | |
| !! | AGCATACAGAAAGGTTTTGT+TGG | + | chr7_3:72631168-72631187 | Msa1122270:intron | 35.0% |
| ! | AAGAGTGTACTACAGAAAGA+AGG | + | chr7_3:72631218-72631237 | Msa1122270:intron | 35.0% |
| TACTACAGAAAGAAGGTGAA+GGG | + | chr7_3:72631225-72631244 | Msa1122270:intron | 35.0% | |
| ATGAAGAGAAATTCCATTGG+AGG | + | chr7_3:72631331-72631350 | Msa1122270:intron | 35.0% | |
| TGAAGAGAAATTCCATTGGA+GGG | + | chr7_3:72631332-72631351 | Msa1122270:intron | 35.0% | |
| TGGAAGGCTCAAAACAATAA+AGG | + | chr7_3:72631460-72631479 | Msa1122270:intron | 35.0% | |
| GGAAGGCTCAAAACAATAAA+GGG | + | chr7_3:72631461-72631480 | Msa1122270:intron | 35.0% | |
| GAAGGCTCAAAACAATAAAG+GGG | + | chr7_3:72631462-72631481 | Msa1122270:intron | 35.0% | |
| GTAAAATAGGATCGTGACTT+AGG | + | chr7_3:72631519-72631538 | Msa1122270:intron | 35.0% | |
| !! | ACTTAGGTTGAGAATACAAG+AGG | + | chr7_3:72631535-72631554 | Msa1122270:intron | 35.0% |
| !! | CTTAGGTTGAGAATACAAGA+GGG | + | chr7_3:72631536-72631555 | Msa1122270:intron | 35.0% |
| !! | TTAGGTTGAGAATACAAGAG+GGG | + | chr7_3:72631537-72631556 | Msa1122270:intron | 35.0% |
| TAAACAGAAATCCTATACCG+AGG | - | chr7_3:72631570-72631589 | None:intergenic | 35.0% | |
| !! | TTTGGTTGTTAGCTTTGTAC+TGG | - | chr7_3:72631626-72631645 | None:intergenic | 35.0% |
| ! | CAAAGGTGCAAATGTTACAA+TGG | + | chr7_3:72631660-72631679 | Msa1122270:intron | 35.0% |
| TTTAGTAGTTCCTTGACATG+GGG | + | chr7_3:72631744-72631763 | Msa1122270:intron | 35.0% | |
| TTTCATGTGAAAGACCCTTT+GGG | - | chr7_3:72631885-72631904 | None:intergenic | 35.0% | |
| ATTTCATGTGAAAGACCCTT+TGG | - | chr7_3:72631886-72631905 | None:intergenic | 35.0% | |
| AAAGGGTCTTTCACATGAAA+TGG | + | chr7_3:72631885-72631904 | Msa1122270:intron | 35.0% | |
| GTGGTCTAAAGATGTTAGTT+AGG | - | chr7_3:72631940-72631959 | None:intergenic | 35.0% | |
| TTCTCAGCTCTTGAGATAAA+TGG | - | chr7_3:72631970-72631989 | None:intergenic | 35.0% | |
| !! | TGGTTTGTTCAAATTCAGCT+AGG | - | chr7_3:72632077-72632096 | None:intergenic | 35.0% |
| CGTATCGAATTACAGTATCA+CGG | - | chr7_3:72632108-72632127 | None:intergenic | 35.0% | |
| TTTAGAAAGTCATCCAAGGT+TGG | + | chr7_3:72632252-72632271 | Msa1122270:intron | 35.0% | |
| CATTTGCACTGTAAAGAAGA+AGG | - | chr7_3:72632458-72632477 | None:intergenic | 35.0% | |
| CTTCTTCTTTACAGTGCAAA+TGG | + | chr7_3:72632456-72632475 | Msa1122270:intron | 35.0% | |
| GAAGCAAATATAAGGCCATA+AGG | - | chr7_3:72632718-72632737 | None:intergenic | 35.0% | |
| ACGGGAATGTCAAAGAAAAA+GGG | - | chr7_3:72632748-72632767 | None:intergenic | 35.0% | |
| AACGGGAATGTCAAAGAAAA+AGG | - | chr7_3:72632749-72632768 | None:intergenic | 35.0% | |
| TGAATGACTTATCTGAGAAG+TGG | - | chr7_3:72632798-72632817 | None:intergenic | 35.0% | |
| AGGTTAGTACAGCTTAGTTA+TGG | + | chr7_3:72632836-72632855 | Msa1122270:intron | 35.0% | |
| GGTTAGTACAGCTTAGTTAT+GGG | + | chr7_3:72632837-72632856 | Msa1122270:intron | 35.0% | |
| ! | TTTCATGAGTTGAATGGTTC+TGG | - | chr7_3:72632885-72632904 | None:intergenic | 35.0% |
| TGTAGCTTCTACTGTCAAAA+TGG | + | chr7_3:72632921-72632940 | Msa1122270:intron | 35.0% | |
| ATTCAAACGGTATAAGGAAC+CGG | - | chr7_3:72632984-72633003 | None:intergenic | 35.0% | |
| GAAGACATTCAAACGGTATA+AGG | - | chr7_3:72632990-72633009 | None:intergenic | 35.0% | |
| GATTAACATCGATGTTGAGT+TGG | + | chr7_3:72633197-72633216 | Msa1122270:intron | 35.0% | |
| TATGCATCATATAGTTGGCA+TGG | - | chr7_3:72633344-72633363 | None:intergenic | 35.0% | |
| TTCTGAGTGCATTAGTTGAT+AGG | + | chr7_3:72633429-72633448 | Msa1122270:intron | 35.0% | |
| !! | GCATTTAGTTTGCAGCTAAA+AGG | - | chr7_3:72633563-72633582 | None:intergenic | 35.0% |
| AGAATGATGAAATGAACTCC+GGG | - | chr7_3:72633719-72633738 | None:intergenic | 35.0% | |
| AAGTAAAACTTGCCTCCATT+TGG | - | chr7_3:72633830-72633849 | None:intergenic | 35.0% | |
| ! | AATCACAACCCTTGTTTCAA+TGG | + | chr7_3:72633979-72633998 | Msa1122270:CDS | 35.0% |
| ! | ATCACAACCCTTGTTTCAAT+GGG | + | chr7_3:72633980-72633999 | Msa1122270:CDS | 35.0% |
| GTCAAATCCCATTGAAACAA+GGG | - | chr7_3:72633990-72634009 | None:intergenic | 35.0% | |
| TGTCAAATCCCATTGAAACA+AGG | - | chr7_3:72633991-72634010 | None:intergenic | 35.0% | |
| TTGTTTCAATGGGATTTGAC+AGG | + | chr7_3:72633990-72634009 | Msa1122270:CDS | 35.0% | |
| GAGTATTTCAACTCCTATTG+AGG | + | chr7_3:72634201-72634220 | Msa1122270:three_prime_UTR | 35.0% | |
| GGAACAATATCTCTAGTAAG+AGG | - | chr7_3:72634348-72634367 | None:intergenic | 35.0% | |
| ! | TTATTGTGTGTGAATGGGTT+CGG | - | chr7_3:72634461-72634480 | None:intergenic | 35.0% |
| TATTCGCAGTGAAGAAGAAG+AGG | - | chr7_3:72628886-72628905 | None:intergenic | 40.0% | |
| TGAACGTACTGAAACCAGAT+GGG | - | chr7_3:72628919-72628938 | None:intergenic | 40.0% | |
| ATGAACGTACTGAAACCAGA+TGG | - | chr7_3:72628920-72628939 | None:intergenic | 40.0% | |
| GGGTGTGTGAAAATTGAAGA+AGG | - | chr7_3:72628950-72628969 | None:intergenic | 40.0% | |
| ATGATGAAAGCCCTTGTAAC+AGG | - | chr7_3:72629092-72629111 | None:intergenic | 40.0% | |
| ! | GCGCTTTTCACAATCTTCTT+TGG | + | chr7_3:72629119-72629138 | Msa1122270:CDS | 40.0% |
| !! | ACAATCTTCTTTGGGATCCA+AGG | + | chr7_3:72629128-72629147 | Msa1122270:CDS | 40.0% |
| CAAGGTCGTTTCAACACTTT+GGG | + | chr7_3:72629146-72629165 | Msa1122270:CDS | 40.0% | |
| CGTGTCTTTGTCTGTGTTTA+TGG | + | chr7_3:72629548-72629567 | Msa1122270:intron | 40.0% | |
| TGGTTCAGGATAGAACACTA+TGG | + | chr7_3:72629733-72629752 | Msa1122270:intron | 40.0% | |
| CTTATCTCACTAAGTGTGGT+TGG | - | chr7_3:72629778-72629797 | None:intergenic | 40.0% | |
| CAACCACACTTAGTGAGATA+AGG | + | chr7_3:72629776-72629795 | Msa1122270:intron | 40.0% | |
| ! | AAGCCTTATCTCACTAAGTG+TGG | - | chr7_3:72629782-72629801 | None:intergenic | 40.0% |
| ACACTTAGTGAGATAAGGCT+TGG | + | chr7_3:72629781-72629800 | Msa1122270:intron | 40.0% | |
| ! | TCTTTGGAAAGCTTCGCATA+TGG | + | chr7_3:72629941-72629960 | Msa1122270:CDS | 40.0% |
| ! | GTTGCTGTAGCACTTTTGAA+AGG | + | chr7_3:72630288-72630307 | Msa1122270:CDS | 40.0% |
| TCAGTTAAGTGTGGATCACA+CGG | + | chr7_3:72630532-72630551 | Msa1122270:intron | 40.0% | |
| AACTTCCGTGAGGATAAAGA+GGG | + | chr7_3:72630624-72630643 | Msa1122270:intron | 40.0% | |
| CTTTACCCTCTTTATCCTCA+CGG | - | chr7_3:72630632-72630651 | None:intergenic | 40.0% | |
| GGATAAAGAGGGTAAAGTCT+TGG | + | chr7_3:72630635-72630654 | Msa1122270:intron | 40.0% | |
| TAGCCTATTCACTAGAAAGG+AGG | + | chr7_3:72630723-72630742 | Msa1122270:intron | 40.0% | |
| ! | AGACCTCCTTTCTAGTGAAT+AGG | - | chr7_3:72630729-72630748 | None:intergenic | 40.0% |
| CACCCTTTATCTTAGGATTC+AGG | + | chr7_3:72630756-72630775 | Msa1122270:intron | 40.0% | |
| CCTCCTGAATCCTAAGATAA+AGG | - | chr7_3:72630762-72630781 | None:intergenic | 40.0% | |
| CCTTTATCTTAGGATTCAGG+AGG | + | chr7_3:72630759-72630778 | Msa1122270:intron | 40.0% | |
| TAAGTAGTTGGACTTGGACT+AGG | + | chr7_3:72630820-72630839 | Msa1122270:intron | 40.0% | |
| ATGTATGACGAGTAAGAGTG+AGG | + | chr7_3:72630939-72630958 | Msa1122270:intron | 40.0% | |
| TGTATGACGAGTAAGAGTGA+GGG | + | chr7_3:72630940-72630959 | Msa1122270:intron | 40.0% | |
| !!! | AAGGTTTTGTTGGCGATCAA+CGG | + | chr7_3:72631178-72631197 | Msa1122270:intron | 40.0% |
| GTACTACAGAAAGAAGGTGA+AGG | + | chr7_3:72631224-72631243 | Msa1122270:intron | 40.0% | |
| ! | TAGGTTGAGAATACAAGAGG+GGG | + | chr7_3:72631538-72631557 | Msa1122270:intron | 40.0% |
| ACTGCAACAATAGGATCAAG+TGG | + | chr7_3:72631691-72631710 | Msa1122270:intron | 40.0% | |
| CTGCAACAATAGGATCAAGT+GGG | + | chr7_3:72631692-72631711 | Msa1122270:intron | 40.0% | |
| ! | GCTGCAATCTGTTTTACCAA+AGG | + | chr7_3:72631766-72631785 | Msa1122270:intron | 40.0% |
| GGTCTTTCACATGAAATGGT+TGG | + | chr7_3:72631889-72631908 | Msa1122270:intron | 40.0% | |
| TGAGATAAATGGAGATGTCG+TGG | - | chr7_3:72631959-72631978 | None:intergenic | 40.0% | |
| AAGAGCTGAGAATATTCAGC+TGG | + | chr7_3:72631978-72631997 | Msa1122270:intron | 40.0% | |
| ACAGTATCACGGAACAGTAA+TGG | - | chr7_3:72632097-72632116 | None:intergenic | 40.0% | |
| TTGTCGATCGCAGAAAATAG+TGG | - | chr7_3:72632211-72632230 | None:intergenic | 40.0% | |
| AAAGTCATCCAAGGTTGGAA+AGG | + | chr7_3:72632257-72632276 | Msa1122270:intron | 40.0% | |
| AACATTGAATGCTGAGACCA+GGG | - | chr7_3:72632337-72632356 | None:intergenic | 40.0% | |
| ! | TACGCAAGAATTTGATGGCA+CGG | + | chr7_3:72632490-72632509 | Msa1122270:intron | 40.0% |
| AATATAAGGCCATAAGGTCC+AGG | - | chr7_3:72632712-72632731 | None:intergenic | 40.0% | |
| TTGACATTCCCGTTTCAACA+CGG | + | chr7_3:72632755-72632774 | Msa1122270:CDS | 40.0% | |
| AGAAGTGGAAACCACAAATC+CGG | - | chr7_3:72632783-72632802 | None:intergenic | 40.0% | |
| !! | CATATATCTAGCTGGTCTTC+AGG | + | chr7_3:72632816-72632835 | Msa1122270:CDS | 40.0% |
| CTTCTATATCCGCAAAGCAA+AGG | + | chr7_3:72633006-72633025 | Msa1122270:CDS | 40.0% | |
| CTATATAGGCGCATTCCTTT+GGG | - | chr7_3:72633098-72633117 | None:intergenic | 40.0% | |
| TCTATATAGGCGCATTCCTT+TGG | - | chr7_3:72633099-72633118 | None:intergenic | 40.0% | |
| ! | TAGTTTGCAGCTAAAAGGGA+AGG | - | chr7_3:72633558-72633577 | None:intergenic | 40.0% |
| TGAACCTACATTACAGTTCC+CGG | + | chr7_3:72633698-72633717 | Msa1122270:intron | 40.0% | |
| ACGAATTTCCTTGCCATCTA+TGG | + | chr7_3:72633743-72633762 | Msa1122270:CDS | 40.0% | |
| CGAATTTCCTTGCCATCTAT+GGG | + | chr7_3:72633744-72633763 | Msa1122270:CDS | 40.0% | |
| GAATTTCCTTGCCATCTATG+GGG | + | chr7_3:72633745-72633764 | Msa1122270:CDS | 40.0% | |
| !!! | CTTTTTTGACTCACTGAGCA+TGG | + | chr7_3:72633893-72633912 | Msa1122270:intron | 40.0% |
| CTTTGTGCAGAGAAACTATC+CGG | + | chr7_3:72633919-72633938 | Msa1122270:intron | 40.0% | |
| ACAAGTCTTGATGTGAGGAT+TGG | + | chr7_3:72634157-72634176 | Msa1122270:three_prime_UTR | 40.0% | |
| CAAGTCTTGATGTGAGGATT+GGG | + | chr7_3:72634158-72634177 | Msa1122270:three_prime_UTR | 40.0% | |
| AAGTCTTGATGTGAGGATTG+GGG | + | chr7_3:72634159-72634178 | Msa1122270:three_prime_UTR | 40.0% | |
| ACTCTGATGAGTAGTGCTTA+CGG | + | chr7_3:72634407-72634426 | Msa1122270:three_prime_UTR | 40.0% | |
| TTCACTGCGAATATGAACGG+AGG | + | chr7_3:72628893-72628912 | Msa1122270:exon | 45.0% | |
| AGCAAGTGCTCCTGTTACAA+GGG | + | chr7_3:72629079-72629098 | Msa1122270:intron | 45.0% | |
| !! | CCAAAGTGTTGAAACGACCT+TGG | - | chr7_3:72629148-72629167 | None:intergenic | 45.0% |
| CCAAGGTCGTTTCAACACTT+TGG | + | chr7_3:72629145-72629164 | Msa1122270:CDS | 45.0% | |
| CACTTTGGGCTTGTCTTATC+AGG | + | chr7_3:72629160-72629179 | Msa1122270:CDS | 45.0% | |
| ACAGACAAAGACACGGACAT+CGG | - | chr7_3:72629543-72629562 | None:intergenic | 45.0% | |
| ACTAAGTGTGGTTGGCAACA+TGG | - | chr7_3:72629770-72629789 | None:intergenic | 45.0% | |
| !! | CTTGTAAGCACTGGAAACAC+CGG | + | chr7_3:72629855-72629874 | Msa1122270:intron | 45.0% |
| ! | GAGTTGTGTTGTTCTTGCTC+TGG | + | chr7_3:72629911-72629930 | Msa1122270:intron | 45.0% |
| TTGCTCTGGCAGGATATCTT+TGG | + | chr7_3:72629925-72629944 | Msa1122270:intron | 45.0% | |
| !! | TCAACACCCGAGTTGATGTT+TGG | + | chr7_3:72629994-72630013 | Msa1122270:CDS | 45.0% |
| CAGTTAAGTGTGGATCACAC+GGG | + | chr7_3:72630533-72630552 | Msa1122270:intron | 45.0% | |
| GGATCACACGGGATGATAAA+CGG | + | chr7_3:72630544-72630563 | Msa1122270:intron | 45.0% | |
| CACATCTTTGAACTTCCGTG+AGG | + | chr7_3:72630614-72630633 | Msa1122270:intron | 45.0% | |
| GAACTTCCGTGAGGATAAAG+AGG | + | chr7_3:72630623-72630642 | Msa1122270:intron | 45.0% | |
| TATCTTAGGATTCAGGAGGC+TGG | + | chr7_3:72630763-72630782 | Msa1122270:intron | 45.0% | |
| ATCTTAGGATTCAGGAGGCT+GGG | + | chr7_3:72630764-72630783 | Msa1122270:intron | 45.0% | |
| !!! | AGGTTTTGTTGGCGATCAAC+GGG | + | chr7_3:72631179-72631198 | Msa1122270:intron | 45.0% |
| TGAATGGGGAGCAGAAGTTA+GGG | + | chr7_3:72631275-72631294 | Msa1122270:intron | 45.0% | |
| GAAGGCTATTTACCCTCCAA+TGG | - | chr7_3:72631347-72631366 | None:intergenic | 45.0% | |
| !! | CAGTGCCAACAGAGGTATTA+TGG | + | chr7_3:72631440-72631459 | Msa1122270:intron | 45.0% |
| !! | GCCAACAGAGGTATTATGGA+AGG | + | chr7_3:72631444-72631463 | Msa1122270:intron | 45.0% |
| GCCTTCCATAATACCTCTGT+TGG | - | chr7_3:72631448-72631467 | None:intergenic | 45.0% | |
| GAAATCCTATACCGAGGAAG+TGG | - | chr7_3:72631564-72631583 | None:intergenic | 45.0% | |
| GACAAGTGCACTGCAACAAT+AGG | + | chr7_3:72631682-72631701 | Msa1122270:intron | 45.0% | |
| AATTCAGACGCATTGTGCAG+TGG | + | chr7_3:72631834-72631853 | Msa1122270:intron | 45.0% | |
| ACACACAACCTTTCCAACCT+TGG | - | chr7_3:72632268-72632287 | None:intergenic | 45.0% | |
| GAACATTGAATGCTGAGACC+AGG | - | chr7_3:72632338-72632357 | None:intergenic | 45.0% | |
| TGCACTGTAAAGAAGAAGGC+AGG | - | chr7_3:72632454-72632473 | None:intergenic | 45.0% | |
| ATAAGGTCCAGGAGTGACTA+GGG | - | chr7_3:72632701-72632720 | None:intergenic | 45.0% | |
| AATCCGGAACCGTGTTGAAA+CGG | - | chr7_3:72632767-72632786 | None:intergenic | 45.0% | |
| !! | GAGTTGAATGGTTCTGGACA+TGG | - | chr7_3:72632879-72632898 | None:intergenic | 45.0% |
| TGGAAAAGGTCCATGTTACC+AGG | + | chr7_3:72632941-72632960 | Msa1122270:CDS | 45.0% | |
| GGAAAAGGTCCATGTTACCA+GGG | + | chr7_3:72632942-72632961 | Msa1122270:CDS | 45.0% | |
| ATGGACACAAGCTTTCCCAA+AGG | + | chr7_3:72633080-72633099 | Msa1122270:intron | 45.0% | |
| GCATGAGTGAATTGTCACGT+GGG | - | chr7_3:72633463-72633482 | None:intergenic | 45.0% | |
| TGCATGAGTGAATTGTCACG+TGG | - | chr7_3:72633464-72633483 | None:intergenic | 45.0% | |
| AACTCCGGGAACTGTAATGT+AGG | - | chr7_3:72633705-72633724 | None:intergenic | 45.0% | |
| TTCTGCAGTAGAACCATCAG+AGG | + | chr7_3:72633952-72633971 | Msa1122270:CDS | 45.0% | |
| GTTGTGATTGAGTCCTCTGA+TGG | - | chr7_3:72633968-72633987 | None:intergenic | 45.0% | |
| TGTGGCAACAAACATCCTAC+TGG | + | chr7_3:72634057-72634076 | Msa1122270:CDS | 45.0% | |
| !! | CATCAAGACTTGTTGAGGAG+TGG | - | chr7_3:72634150-72634169 | None:intergenic | 45.0% |
| !! | CCTCACATCAAGACTTGTTG+AGG | - | chr7_3:72634155-72634174 | None:intergenic | 45.0% |
| CCTCAACAAGTCTTGATGTG+AGG | + | chr7_3:72634152-72634171 | Msa1122270:three_prime_UTR | 45.0% | |
| AATATGAACGGAGGCCCATC+TGG | + | chr7_3:72628902-72628921 | Msa1122270:exon | 50.0% | |
| CAGCAAGTGCTCCTGTTACA+AGG | + | chr7_3:72629078-72629097 | Msa1122270:intron | 50.0% | |
| ! | TGTGTTGTTCTTGCTCTGGC+AGG | + | chr7_3:72629915-72629934 | Msa1122270:intron | 50.0% |
| !! | CAACTCGGGTGTTGATGTGA+AGG | - | chr7_3:72629989-72630008 | None:intergenic | 50.0% |
| ! | ATGTGACGCACTCTTTTCGC+AGG | + | chr7_3:72630221-72630240 | Msa1122270:intron | 50.0% |
| TCTTAGGATTCAGGAGGCTG+GGG | + | chr7_3:72630765-72630784 | Msa1122270:intron | 50.0% | |
| ACTTCTGTGGTCAACCTCCT+TGG | - | chr7_3:72631055-72631074 | None:intergenic | 50.0% | |
| GAACAGGGTTTGACCCATGT+TGG | - | chr7_3:72631132-72631151 | None:intergenic | 50.0% | |
| CACTCTTAACAACAGCCCCT+GGG | - | chr7_3:72631205-72631224 | None:intergenic | 50.0% | |
| ACACTCTTAACAACAGCCCC+TGG | - | chr7_3:72631206-72631225 | None:intergenic | 50.0% | |
| CTGAATGGGGAGCAGAAGTT+AGG | + | chr7_3:72631274-72631293 | Msa1122270:intron | 50.0% | |
| GAGTCTATCAGTGCCAACAG+AGG | + | chr7_3:72631432-72631451 | Msa1122270:intron | 50.0% | |
| TGCTTCAAATCCAGACACCC+TGG | + | chr7_3:72632317-72632336 | Msa1122270:intron | 50.0% | |
| GGAGTGACTAGGGTTGTTGA+AGG | - | chr7_3:72632691-72632710 | None:intergenic | 50.0% | |
| TCAACAACCCTAGTCACTCC+TGG | + | chr7_3:72632691-72632710 | Msa1122270:CDS | 50.0% | |
| CATAAGGTCCAGGAGTGACT+AGG | - | chr7_3:72632702-72632721 | None:intergenic | 50.0% | |
| CTAGTCACTCCTGGACCTTA+TGG | + | chr7_3:72632700-72632719 | Msa1122270:CDS | 50.0% | |
| TTCCCGTTTCAACACGGTTC+CGG | + | chr7_3:72632761-72632780 | Msa1122270:CDS | 50.0% | |
| ATCCGGAACCGTGTTGAAAC+GGG | - | chr7_3:72632766-72632785 | None:intergenic | 50.0% | |
| TCAACACGGTTCCGGATTTG+TGG | + | chr7_3:72632769-72632788 | Msa1122270:CDS | 50.0% | |
| TCCATGTTACCAGGGATGTG+TGG | + | chr7_3:72632950-72632969 | Msa1122270:CDS | 50.0% | |
| AACGGTATAAGGAACCGGCA+AGG | - | chr7_3:72632979-72632998 | None:intergenic | 50.0% | |
| ! | TTCCTCGTTGTTGTTGTGCG+TGG | - | chr7_3:72633774-72633793 | None:intergenic | 50.0% |
| GGTTCTACTGCAGAATGCGT+TGG | - | chr7_3:72633947-72633966 | None:intergenic | 50.0% | |
| TGCCACATTCACGTCGTTTC+TGG | - | chr7_3:72634044-72634063 | None:intergenic | 50.0% | |
| GGCAACAAACATCCTACTGG+AGG | + | chr7_3:72634060-72634079 | Msa1122270:CDS | 50.0% | |
| TGGGGAGCAGAAGTTAGGGT+AGG | + | chr7_3:72631279-72631298 | Msa1122270:intron | 55.0% | |
| CAGATTGCAGCCCCATGTCA+AGG | - | chr7_3:72631757-72631776 | None:intergenic | 55.0% | |
| ! | AATGCTGAGACCAGGGTGTC+TGG | - | chr7_3:72632330-72632349 | None:intergenic | 55.0% |
| GCCACACATCCCTGGTAACA+TGG | - | chr7_3:72632954-72632973 | None:intergenic | 55.0% | |
| TGGAGTCCCCATAGATGGCA+AGG | - | chr7_3:72633754-72633773 | None:intergenic | 55.0% | |
| CTCCACGCACAACAACAACG+AGG | + | chr7_3:72633769-72633788 | Msa1122270:CDS | 55.0% | |
| ATTTGGCGAGCTGGGTAGGA+TGG | - | chr7_3:72633813-72633832 | None:intergenic | 55.0% | |
| ATCCTACCCAGCTCGCCAAA+TGG | + | chr7_3:72633812-72633831 | Msa1122270:CDS | 55.0% | |
| TTGCCTCCATTTGGCGAGCT+GGG | - | chr7_3:72633821-72633840 | None:intergenic | 55.0% | |
| ACTGCAGAATGCGTTGGAGC+CGG | - | chr7_3:72633941-72633960 | None:intergenic | 55.0% | |
| !! | GTCGTTTCTGGCCTGCACTA+GGG | - | chr7_3:72634032-72634051 | None:intergenic | 55.0% |
| GGCCAGAAACGACGTGAATG+TGG | + | chr7_3:72634039-72634058 | Msa1122270:CDS | 55.0% | |
| ACAAGAGGGGGCCACTTCCT+CGG | + | chr7_3:72631550-72631569 | Msa1122270:intron | 60.0% | |
| GCAAGGATGCCACACATCCC+TGG | - | chr7_3:72632962-72632981 | None:intergenic | 60.0% | |
| GGGATGTGTGGCATCCTTGC+CGG | + | chr7_3:72632962-72632981 | Msa1122270:CDS | 60.0% | |
| GTGCGTGGAGTCCCCATAGA+TGG | - | chr7_3:72633759-72633778 | None:intergenic | 60.0% | |
| CTCCATTTGGCGAGCTGGGT+AGG | - | chr7_3:72633817-72633836 | None:intergenic | 60.0% | |
| CTACCCAGCTCGCCAAATGG+AGG | + | chr7_3:72633815-72633834 | Msa1122270:CDS | 60.0% | |
| CTTGCCTCCATTTGGCGAGC+TGG | - | chr7_3:72633822-72633841 | None:intergenic | 60.0% | |
| TGCCAGACAAGCCCTAGTGC+AGG | + | chr7_3:72634018-72634037 | Msa1122270:CDS | 60.0% | |
| !! | CGTCGTTTCTGGCCTGCACT+AGG | - | chr7_3:72634033-72634052 | None:intergenic | 60.0% |
| AGTGGGACTGAGCCTCCAGT+AGG | - | chr7_3:72634075-72634094 | None:intergenic | 60.0% | |
| TGTTGGCGATCAACGGGCCC+AGG | + | chr7_3:72631185-72631204 | Msa1122270:intron | 65.0% | |
| GTTGGCGATCAACGGGCCCA+GGG | + | chr7_3:72631186-72631205 | Msa1122270:intron | 65.0% | |
| TTGGCGATCAACGGGCCCAG+GGG | + | chr7_3:72631187-72631206 | Msa1122270:intron | 65.0% | |
| GGGGGCCACTTCCTCGGTAT+AGG | + | chr7_3:72631556-72631575 | Msa1122270:intron | 65.0% | |
| GGCCTGCACTAGGGCTTGTC+TGG | - | chr7_3:72634023-72634042 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 72628802 | 72634505 | 72628802 | ID=Msa1122270;Name=Msa1122270 |
| chr7_3 | mRNA | 72628802 | 72634505 | 72628802 | ID=Msa1122270-mRNA-1;Parent=Msa1122270;Name=Msa1122270-mRNA-1;_AED=0.10;_eAED=0.10;_QI=103|1|1|1|0.87|0.77|9|378|292 |
| chr7_3 | exon | 72628802 | 72628929 | 72628802 | ID=Msa1122270-mRNA-1:exon:18902;Parent=Msa1122270-mRNA-1 |
| chr7_3 | exon | 72629081 | 72629181 | 72629081 | ID=Msa1122270-mRNA-1:exon:18903;Parent=Msa1122270-mRNA-1 |
| chr7_3 | exon | 72629937 | 72630077 | 72629937 | ID=Msa1122270-mRNA-1:exon:18904;Parent=Msa1122270-mRNA-1 |
| chr7_3 | exon | 72630243 | 72630309 | 72630243 | ID=Msa1122270-mRNA-1:exon:18905;Parent=Msa1122270-mRNA-1 |
| chr7_3 | exon | 72632686 | 72632837 | 72632686 | ID=Msa1122270-mRNA-1:exon:18906;Parent=Msa1122270-mRNA-1 |
| chr7_3 | exon | 72632926 | 72633027 | 72632926 | ID=Msa1122270-mRNA-1:exon:18907;Parent=Msa1122270-mRNA-1 |
| chr7_3 | exon | 72633714 | 72633836 | 72633714 | ID=Msa1122270-mRNA-1:exon:18908;Parent=Msa1122270-mRNA-1 |
| chr7_3 | exon | 72633929 | 72634338 | 72633929 | ID=Msa1122270-mRNA-1:exon:18909;Parent=Msa1122270-mRNA-1 |
| chr7_3 | exon | 72634370 | 72634505 | 72634370 | ID=Msa1122270-mRNA-1:exon:18910;Parent=Msa1122270-mRNA-1 |
| chr7_3 | five_prime_UTR | 72628802 | 72628904 | 72628802 | ID=Msa1122270-mRNA-1:five_prime_utr;Parent=Msa1122270-mRNA-1 |
| chr7_3 | CDS | 72628905 | 72628929 | 72628905 | ID=Msa1122270-mRNA-1:cds;Parent=Msa1122270-mRNA-1 |
| chr7_3 | CDS | 72629081 | 72629181 | 72629081 | ID=Msa1122270-mRNA-1:cds;Parent=Msa1122270-mRNA-1 |
| chr7_3 | CDS | 72629937 | 72630077 | 72629937 | ID=Msa1122270-mRNA-1:cds;Parent=Msa1122270-mRNA-1 |
| chr7_3 | CDS | 72630243 | 72630309 | 72630243 | ID=Msa1122270-mRNA-1:cds;Parent=Msa1122270-mRNA-1 |
| chr7_3 | CDS | 72632686 | 72632837 | 72632686 | ID=Msa1122270-mRNA-1:cds;Parent=Msa1122270-mRNA-1 |
| chr7_3 | CDS | 72632926 | 72633027 | 72632926 | ID=Msa1122270-mRNA-1:cds;Parent=Msa1122270-mRNA-1 |
| chr7_3 | CDS | 72633714 | 72633836 | 72633714 | ID=Msa1122270-mRNA-1:cds;Parent=Msa1122270-mRNA-1 |
| chr7_3 | CDS | 72633929 | 72634096 | 72633929 | ID=Msa1122270-mRNA-1:cds;Parent=Msa1122270-mRNA-1 |
| chr7_3 | three_prime_UTR | 72634097 | 72634338 | 72634097 | ID=Msa1122270-mRNA-1:three_prime_utr;Parent=Msa1122270-mRNA-1 |
| chr7_3 | three_prime_UTR | 72634370 | 72634505 | 72634370 | ID=Msa1122270-mRNA-1:three_prime_utr;Parent=Msa1122270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
