Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160730 | XP_003624969.1 | 98.630 | 292 | 4 | 0 | 1 | 292 | 1 | 292 | 0.0 | 586 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160730 | sp|Q9LET3|RBL20_ARATH | 73.379 | 293 | 77 | 1 | 1 | 292 | 1 | 293 | 3.66e-150 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160730 | G7KQP7 | 98.630 | 292 | 4 | 0 | 1 | 292 | 1 | 292 | 0.0 | 586 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1160730 | -0.814087 | 1.842077e-51 | -8.615850e-47 |
| Msa0011850 | Msa1160730 | -0.806025 | 1.005119e-49 | -8.615850e-47 |
| Msa0018220 | Msa1160730 | -0.813262 | 2.798517e-51 | -8.615850e-47 |
| Msa0024680 | Msa1160730 | -0.805030 | 1.625469e-49 | -8.615850e-47 |
| Msa0030000 | Msa1160730 | -0.808108 | 3.641404e-50 | -8.615850e-47 |
| Msa0043680 | Msa1160730 | -0.818053 | 2.396224e-52 | -8.615850e-47 |
| Msa0052460 | Msa1160730 | -0.802159 | 6.403916e-49 | -8.615850e-47 |
| Msa0092660 | Msa1160730 | -0.803331 | 3.668956e-49 | -8.615850e-47 |
| Msa0092680 | Msa1160730 | -0.805250 | 1.461500e-49 | -8.615850e-47 |
| Msa0092730 | Msa1160730 | -0.815390 | 9.474361e-52 | -8.615850e-47 |
| Msa0094420 | Msa1160730 | -0.813002 | 3.191056e-51 | -8.615850e-47 |
| Msa0097050 | Msa1160730 | -0.813839 | 2.089135e-51 | -8.615850e-47 |
| Msa0620270 | Msa1160730 | -0.818935 | 1.512145e-52 | -8.615850e-47 |
| Msa0640880 | Msa1160730 | -0.804517 | 2.079664e-49 | -8.615850e-47 |
| Msa0642650 | Msa1160730 | -0.815446 | 9.207195e-52 | -8.615850e-47 |
| Msa0681890 | Msa1160730 | -0.834993 | 2.173067e-56 | -8.615850e-47 |
| Msa0703720 | Msa1160730 | -0.810941 | 8.975159e-51 | -8.615850e-47 |
| Msa0703760 | Msa1160730 | -0.803981 | 2.689303e-49 | -8.615850e-47 |
| Msa0709480 | Msa1160730 | -0.806935 | 6.458826e-50 | -8.615850e-47 |
| Msa0726440 | Msa1160730 | -0.806091 | 9.732445e-50 | -8.615850e-47 |
| Msa0757110 | Msa1160730 | -0.822167 | 2.738248e-53 | -8.615850e-47 |
| Msa0790830 | Msa1160730 | -0.800894 | 1.163515e-48 | -8.615850e-47 |
| Msa0814760 | Msa1160730 | -0.834612 | 2.710390e-56 | -8.615850e-47 |
| Msa0137600 | Msa1160730 | -0.822262 | 2.602994e-53 | -8.615850e-47 |
| Msa0146470 | Msa1160730 | -0.812978 | 3.229233e-51 | -8.615850e-47 |
| Msa0150210 | Msa1160730 | -0.808329 | 3.266786e-50 | -8.615850e-47 |
| Msa0175900 | Msa1160730 | -0.811416 | 7.076687e-51 | -8.615850e-47 |
| Msa0207000 | Msa1160730 | -0.806682 | 7.305544e-50 | -8.615850e-47 |
| Msa0207180 | Msa1160730 | -0.800626 | 1.319513e-48 | -8.615850e-47 |
| Msa0210780 | Msa1160730 | -0.807936 | 3.962010e-50 | -8.615850e-47 |
| Msa0210840 | Msa1160730 | -0.812651 | 3.808252e-51 | -8.615850e-47 |
| Msa0222920 | Msa1160730 | -0.801342 | 9.420630e-49 | -8.615850e-47 |
| Msa0227500 | Msa1160730 | -0.801605 | 8.322895e-49 | -8.615850e-47 |
| Msa0230400 | Msa1160730 | -0.819248 | 1.282812e-52 | -8.615850e-47 |
| Msa0371610 | Msa1160730 | -0.823685 | 1.212234e-53 | -8.615850e-47 |
| Msa0382290 | Msa1160730 | -0.803203 | 3.898861e-49 | -8.615850e-47 |
| Msa0417630 | Msa1160730 | -0.828595 | 8.236921e-55 | -8.615850e-47 |
| Msa0418480 | Msa1160730 | -0.800515 | 1.390165e-48 | -8.615850e-47 |
| Msa0420070 | Msa1160730 | -0.833234 | 5.996682e-56 | -8.615850e-47 |
| Msa0431800 | Msa1160730 | -0.805726 | 1.161642e-49 | -8.615850e-47 |
| Msa0436450 | Msa1160730 | -0.825649 | 4.176726e-54 | -8.615850e-47 |
| Msa0439780 | Msa1160730 | -0.828369 | 9.340629e-55 | -8.615850e-47 |
| Msa0465860 | Msa1160730 | -0.808252 | 3.392450e-50 | -8.615850e-47 |
| Msa0466100 | Msa1160730 | -0.806598 | 7.611770e-50 | -8.615850e-47 |
| Msa0477780 | Msa1160730 | -0.814742 | 1.319416e-51 | -8.615850e-47 |
| Msa0990520 | Msa1160730 | -0.803788 | 2.949949e-49 | -8.615850e-47 |
| Msa0996090 | Msa1160730 | -0.812309 | 4.522690e-51 | -8.615850e-47 |
| Msa1004500 | Msa1160730 | -0.805922 | 1.056202e-49 | -8.615850e-47 |
| Msa1004520 | Msa1160730 | -0.802420 | 5.657483e-49 | -8.615850e-47 |
| Msa1009000 | Msa1160730 | -0.801964 | 7.023603e-49 | -8.615850e-47 |
| Msa1033440 | Msa1160730 | 0.804678 | 1.924629e-49 | -8.615850e-47 |
| Msa1040770 | Msa1160730 | -0.808219 | 3.448222e-50 | -8.615850e-47 |
| Msa1044340 | Msa1160730 | -0.800870 | 1.176542e-48 | -8.615850e-47 |
| Msa1061180 | Msa1160730 | -0.801577 | 8.432953e-49 | -8.615850e-47 |
| Msa0247310 | Msa1160730 | -0.801953 | 7.059416e-49 | -8.615850e-47 |
| Msa0253410 | Msa1160730 | -0.807760 | 4.319103e-50 | -8.615850e-47 |
| Msa0264350 | Msa1160730 | -0.839623 | 1.418246e-57 | -8.615850e-47 |
| Msa0274780 | Msa1160730 | -0.829204 | 5.865444e-55 | -8.615850e-47 |
| Msa0302450 | Msa1160730 | -0.855623 | 5.570305e-62 | -8.615850e-47 |
| Msa0304870 | Msa1160730 | -0.818656 | 1.749410e-52 | -8.615850e-47 |
| Msa0315480 | Msa1160730 | -0.816357 | 5.764829e-52 | -8.615850e-47 |
| Msa0341260 | Msa1160730 | -0.819428 | 1.167584e-52 | -8.615850e-47 |
| Msa1122270 | Msa1160730 | 0.943065 | 2.352471e-102 | -8.615850e-47 |
| Msa1149760 | Msa1160730 | -0.845346 | 4.301571e-59 | -8.615850e-47 |
| Msa1160730 | Msa1166180 | -0.820503 | 6.625860e-53 | -8.615850e-47 |
| Msa1160730 | Msa1166280 | -0.813976 | 1.948889e-51 | -8.615850e-47 |
| Msa1160730 | Msa1171340 | -0.803753 | 2.999522e-49 | -8.615850e-47 |
| Msa1160730 | Msa1200920 | -0.847228 | 1.320897e-59 | -8.615850e-47 |
| Msa1160730 | Msa1220450 | 0.845967 | 2.917875e-59 | -8.615850e-47 |
| Msa1160730 | Msa1220460 | 0.839138 | 1.895143e-57 | -8.615850e-47 |
| Msa1160730 | Msa1220480 | 0.837208 | 5.953875e-57 | -8.615850e-47 |
| Msa1160730 | Msa1223840 | -0.819219 | 1.303095e-52 | -8.615850e-47 |
| Msa1160730 | Msa1232860 | -0.816970 | 4.201572e-52 | -8.615850e-47 |
| Msa1160730 | Msa1235890 | -0.800512 | 1.391781e-48 | -8.615850e-47 |
| Msa1160730 | Msa1261340 | -0.800268 | 1.561135e-48 | -8.615850e-47 |
| Msa1160730 | Msa1261360 | -0.802768 | 4.797383e-49 | -8.615850e-47 |
| Msa1160730 | Msa1263660 | -0.807132 | 5.868360e-50 | -8.615850e-47 |
| Msa1160730 | Msa1271510 | -0.803844 | 2.871578e-49 | -8.615850e-47 |
| Msa1160730 | Msa1271600 | -0.802157 | 6.409660e-49 | -8.615850e-47 |
| Msa1160730 | Msa1283770 | -0.818988 | 1.470455e-52 | -8.615850e-47 |
| Msa1160730 | Msa1313460 | -0.811474 | 6.875983e-51 | -8.615850e-47 |
| Msa1160730 | Msa1323060 | -0.812941 | 3.290874e-51 | -8.615850e-47 |
| Msa1160730 | Msa1337730 | -0.802492 | 5.468261e-49 | -8.615850e-47 |
| Msa1160730 | Msa1352820 | -0.830932 | 2.222963e-55 | -8.615850e-47 |
| Msa1160730 | Msa1354040 | -0.811053 | 8.483435e-51 | -8.615850e-47 |
| Msa1160730 | Msa1376530 | -0.807973 | 3.890483e-50 | -8.615850e-47 |
| Msa1160730 | Msa1379980 | -0.831553 | 1.564307e-55 | -8.615850e-47 |
| Msa1160730 | Msa1421810 | -0.805682 | 1.186530e-49 | -8.615850e-47 |
| Msa1160730 | Msa1439680 | -0.804084 | 2.559528e-49 | -8.615850e-47 |
| Msa1160730 | Msa1442030 | -0.802222 | 6.213832e-49 | -8.615850e-47 |
| Msa1160730 | Msa1442300 | -0.805153 | 1.531449e-49 | -8.615850e-47 |
| Msa0487560 | Msa1160730 | -0.804555 | 2.042130e-49 | -8.615850e-47 |
| Msa0510230 | Msa1160730 | -0.816845 | 4.482495e-52 | -8.615850e-47 |
| Msa0511890 | Msa1160730 | -0.803936 | 2.748365e-49 | -8.615850e-47 |
| Msa0514990 | Msa1160730 | -0.807880 | 4.072200e-50 | -8.615850e-47 |
| Msa0524090 | Msa1160730 | -0.800326 | 1.519136e-48 | -8.615850e-47 |
| Msa0538240 | Msa1160730 | -0.823555 | 1.300857e-53 | -8.615850e-47 |
| Msa0594180 | Msa1160730 | -0.800755 | 1.241769e-48 | -8.615850e-47 |
| Msa0600390 | Msa1160730 | -0.810726 | 9.987132e-51 | -8.615850e-47 |
| Msa0875630 | Msa1160730 | -0.812696 | 3.722761e-51 | -8.615850e-47 |
| Msa0900320 | Msa1160730 | -0.815699 | 8.088250e-52 | -8.615850e-47 |
| Msa0907700 | Msa1160730 | -0.814628 | 1.398746e-51 | -8.615850e-47 |
| Msa0910650 | Msa1160730 | -0.802897 | 4.511451e-49 | -8.615850e-47 |
| Msa0922540 | Msa1160730 | -0.816823 | 4.532848e-52 | -8.615850e-47 |
| Msa0925160 | Msa1160730 | -0.818301 | 2.105040e-52 | -8.615850e-47 |
| Msa0930330 | Msa1160730 | -0.813340 | 2.689224e-51 | -8.615850e-47 |
| Msa0946650 | Msa1160730 | -0.805030 | 1.625078e-49 | -8.615850e-47 |
| Msa0955260 | Msa1160730 | -0.804472 | 2.125052e-49 | -8.615850e-47 |
| Msa0955300 | Msa1160730 | -0.801797 | 7.600814e-49 | -8.615850e-47 |
| Msa0955310 | Msa1160730 | -0.802812 | 4.697338e-49 | -8.615850e-47 |
| Msa0958020 | Msa1160730 | -0.801029 | 1.091671e-48 | -8.615850e-47 |
| Msa0965960 | Msa1160730 | -0.816628 | 5.013553e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160730 | MtrunA17_Chr7g0256051 | 98.630 | 292 | 4 | 0 | 1 | 292 | 1 | 292 | 0.0 | 586 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160730 | AT3G56740.1 | 73.379 | 293 | 77 | 1 | 1 | 292 | 1 | 293 | 3.72e-151 | 425 |
| Msa1160730 | AT2G41160.1 | 66.780 | 295 | 87 | 2 | 1 | 292 | 1 | 287 | 1.03e-139 | 395 |
| Msa1160730 | AT2G41160.2 | 69.325 | 163 | 50 | 0 | 1 | 163 | 1 | 163 | 3.20e-77 | 234 |
Find 116 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCACATTCACGTCGTTTC+TGG | 0.121166 | 7_4:-50799487 | None:intergenic |
| ACGAATTTCCTTGCCATCTA+TGG | 0.140196 | 7_4:+50799189 | Msa1160730:CDS |
| TTCCTTCCATAAACAAAATA+TGG | 0.187431 | 7_4:+50799543 | Msa1160730:three_prime_UTR |
| CACTTTGGGCTTGTCTTATC+AGG | 0.223156 | 7_4:+50794577 | Msa1160730:CDS |
| AACGGGAATGTCAGAGAAAA+AGG | 0.225565 | 7_4:-50798192 | None:intergenic |
| GTTTCTTACCGAGTGTTTAT+TGG | 0.239336 | 7_4:-50795510 | None:intergenic |
| TATTAACACCAGCACTAAAA+TGG | 0.262768 | 7_4:-50799708 | None:intergenic |
| TGTAGCTTCTACTGTCAAAA+TGG | 0.265379 | 7_4:+50798367 | Msa1160730:intron |
| TGTATCTGCTATATTACTTC+AGG | 0.275704 | 7_4:+50795465 | Msa1160730:CDS |
| CATCAGAGTAACATAGTTAA+TGG | 0.276649 | 7_4:-50799839 | None:intergenic |
| TTAATAGATCAATGAGAATT+AGG | 0.289480 | 7_4:+50799725 | Msa1160730:three_prime_UTR |
| TAAACAAAATATGGATTGTT+TGG | 0.299874 | 7_4:+50799552 | Msa1160730:three_prime_UTR |
| TTGCTCTGGCAGGATATCTT+TGG | 0.301829 | 7_4:+50795371 | Msa1160730:intron |
| GAAGACATTCAAACGGTATA+AGG | 0.315844 | 7_4:-50798433 | None:intergenic |
| TTCCCGTTTCAACACGGTTC+CGG | 0.316161 | 7_4:+50798207 | Msa1160730:CDS |
| CATATATCTAGCTGGTCTTC+AGG | 0.318381 | 7_4:+50798262 | Msa1160730:CDS |
| CAAGGTCGTTTCAACACTTT+GGG | 0.318841 | 7_4:+50794563 | Msa1160730:CDS |
| TACAAATTACTTTAAACATA+TGG | 0.321116 | 7_4:+50799755 | Msa1160730:three_prime_UTR |
| CGTCGTTTCTGGCCTGCACT+AGG | 0.335548 | 7_4:-50799476 | None:intergenic |
| CTAGTCACTCCTGGACCTTA+TGG | 0.354454 | 7_4:+50798146 | Msa1160730:CDS |
| AATCACAACCCTTGTTTCAA+TGG | 0.355279 | 7_4:+50799425 | Msa1160730:CDS |
| GGGATGTGTGGCATCCTTGC+CGG | 0.365193 | 7_4:+50798408 | Msa1160730:CDS |
| CAAGTCTTGATGTGAGGATT+GGG | 0.365948 | 7_4:+50799604 | Msa1160730:three_prime_UTR |
| GTACAAATGAAGCAAATATA+AGG | 0.367164 | 7_4:-50798169 | None:intergenic |
| TCAACACCCGAGTTGATGTT+TGG | 0.372056 | 7_4:+50795440 | Msa1160730:CDS |
| AGGGTATTTGAGAGACAAAT+TGG | 0.377821 | 7_4:+50795485 | Msa1160730:CDS |
| ATCCGGAACCGTGTTGAAAC+GGG | 0.381204 | 7_4:-50798209 | None:intergenic |
| CCAAGGTCGTTTCAACACTT+TGG | 0.385546 | 7_4:+50794562 | Msa1160730:CDS |
| CTTGCCTCCATTTGGCGAGC+TGG | 0.389639 | 7_4:-50799265 | None:intergenic |
| ATAAAATTACCTTTGCTTTG+CGG | 0.408479 | 7_4:-50798461 | None:intergenic |
| AATCCGGAACCGTGTTGAAA+CGG | 0.409263 | 7_4:-50798210 | None:intergenic |
| AACAACAACGAGGAATGTTA+TGG | 0.410813 | 7_4:+50799225 | Msa1160730:CDS |
| ATGATGAAAGCCCTTGTAAC+AGG | 0.411155 | 7_4:-50794506 | None:intergenic |
| ATTTATTTATTGTGTGTGAA+TGG | 0.412331 | 7_4:-50799910 | None:intergenic |
| CGAATTTCCTTGCCATCTAT+GGG | 0.414878 | 7_4:+50799190 | Msa1160730:CDS |
| AAGATGAACGGAGGCCCATC+TGG | 0.417863 | 7_4:+50794319 | Msa1160730:exon |
| ATCACAACCCTTGTTTCAAT+GGG | 0.418507 | 7_4:+50799426 | Msa1160730:CDS |
| TCAACACGGTTCCGGATTTG+TGG | 0.420358 | 7_4:+50798215 | Msa1160730:CDS |
| TCTTTGGAAAGCTTCGCATA+TGG | 0.424524 | 7_4:+50795387 | Msa1160730:CDS |
| CGTTTGAATGAAAATTTGTT+CGG | 0.428392 | 7_4:-50794225 | None:intergenic |
| AAGTAAAACTTGCCTCCATT+TGG | 0.437456 | 7_4:-50799273 | None:intergenic |
| GAGTATTTCAACTCCTATTG+AGG | 0.455983 | 7_4:+50799647 | Msa1160730:three_prime_UTR |
| ACAAGTCTTGATGTGAGGAT+TGG | 0.459176 | 7_4:+50799603 | Msa1160730:three_prime_UTR |
| CAGCAAATGCTCCTGTTACA+AGG | 0.460401 | 7_4:+50794495 | Msa1160730:intron |
| GTATCTGCTATATTACTTCA+GGG | 0.469006 | 7_4:+50795466 | Msa1160730:CDS |
| TTGTTTATGGAAGGAATTAG+TGG | 0.477540 | 7_4:-50799536 | None:intergenic |
| TTGCCTCCATTTGGCGAGCT+GGG | 0.478294 | 7_4:-50799264 | None:intergenic |
| TTCTACTGTCAAAATGGAAA+AGG | 0.478869 | 7_4:+50798373 | Msa1160730:CDS |
| TTATTGTGTGTGAATGGGTT+CGG | 0.480099 | 7_4:-50799904 | None:intergenic |
| ATGTTTAAAGTAATTTGTAC+AGG | 0.480336 | 7_4:-50799751 | None:intergenic |
| ACAACAACGAGGAATGTTAT+GGG | 0.480884 | 7_4:+50799226 | Msa1160730:CDS |
| GAAGCAAATATAAGGCCATA+AGG | 0.481302 | 7_4:-50798161 | None:intergenic |
| TGGAAAAGGTCCATGTTACC+AGG | 0.482508 | 7_4:+50798387 | Msa1160730:CDS |
| ATCCTACCCAGCTCGCCAAA+TGG | 0.485081 | 7_4:+50799258 | Msa1160730:CDS |
| TTTATTTATTGTGTGTGAAT+GGG | 0.487139 | 7_4:-50799909 | None:intergenic |
| TTGTTTCAATGGGATTTGAC+AGG | 0.492409 | 7_4:+50799436 | Msa1160730:CDS |
| ATTCAAACGGTATAAGGAAC+CGG | 0.492907 | 7_4:-50798427 | None:intergenic |
| CTTTGTGCAGAGAAACTATC+CGG | 0.494839 | 7_4:+50799365 | Msa1160730:intron |
| CATAAGGTCCAGGAGTGACT+AGG | 0.495943 | 7_4:-50798145 | None:intergenic |
| GTGCGTGGAGTCCCCATAGA+TGG | 0.497459 | 7_4:-50799202 | None:intergenic |
| ACAATCTTCTTTGGGATCCA+AGG | 0.509043 | 7_4:+50794545 | Msa1160730:CDS |
| TTCTTCACTGCGAAGATGAA+CGG | 0.509557 | 7_4:+50794307 | Msa1160730:exon |
| AGAAGTGGAAACCACAAATC+CGG | 0.517755 | 7_4:-50798226 | None:intergenic |
| CTCCATTTGGCGAGCTGGGT+AGG | 0.519162 | 7_4:-50799260 | None:intergenic |
| TCAACAACCCTAGTCACTCC+TGG | 0.520704 | 7_4:+50798137 | Msa1160730:CDS |
| TGTGGCAACAAACATCCTAC+TGG | 0.528754 | 7_4:+50799503 | Msa1160730:CDS |
| GTCGTTTCTGGCCTGCACTA+GGG | 0.529533 | 7_4:-50799475 | None:intergenic |
| AAGAATGATGAAATGAACTC+CGG | 0.532307 | 7_4:-50799163 | None:intergenic |
| TGAATGACTTATCTGAGAAG+TGG | 0.532500 | 7_4:-50798241 | None:intergenic |
| TGTTTATGGAAGGAATTAGT+GGG | 0.533877 | 7_4:-50799535 | None:intergenic |
| ACTGCAGAATGCGTTGGAGC+CGG | 0.536679 | 7_4:-50799384 | None:intergenic |
| AGAATGATGAAATGAACTCC+GGG | 0.548630 | 7_4:-50799162 | None:intergenic |
| ATTTGGCGAGCTGGGTAGGA+TGG | 0.551108 | 7_4:-50799256 | None:intergenic |
| AAGTCATTCATATATCTAGC+TGG | 0.554427 | 7_4:+50798254 | Msa1160730:CDS |
| GCAAGGATGCCACACATCCC+TGG | 0.554858 | 7_4:-50798405 | None:intergenic |
| AGCAAATGCTCCTGTTACAA+GGG | 0.557156 | 7_4:+50794496 | Msa1160730:intron |
| GGAGTGACTAGGGTTGTTGA+AGG | 0.558621 | 7_4:-50798134 | None:intergenic |
| TCTTCGCAGTGAAGAAGAAG+AGG | 0.563934 | 7_4:-50794300 | None:intergenic |
| TTCCTCGTTGTTGTTGTGCG+TGG | 0.564527 | 7_4:-50799217 | None:intergenic |
| TGTCAAATCCCATTGAAACA+AGG | 0.565140 | 7_4:-50799434 | None:intergenic |
| AATATAAGGCCATAAGGTCC+AGG | 0.569522 | 7_4:-50798155 | None:intergenic |
| ACTCTGATGAGTAGTGCTTA+CGG | 0.570998 | 7_4:+50799853 | Msa1160730:three_prime_UTR |
| TGCCAGACAAGCCCTAGTGC+AGG | 0.571319 | 7_4:+50799464 | Msa1160730:CDS |
| CTGACATTCCCGTTTCAACA+CGG | 0.572933 | 7_4:+50798201 | Msa1160730:CDS |
| ATAAGGTCCAGGAGTGACTA+GGG | 0.576095 | 7_4:-50798144 | None:intergenic |
| TCCATGTTACCAGGGATGTG+TGG | 0.577711 | 7_4:+50798396 | Msa1160730:CDS |
| GTCAAATCCCATTGAAACAA+GGG | 0.578126 | 7_4:-50799433 | None:intergenic |
| GGCCAGAAACGACGTGAATG+TGG | 0.583853 | 7_4:+50799485 | Msa1160730:CDS |
| AAATAGTAGTGAGGATAACA+TGG | 0.585490 | 7_4:-50795705 | None:intergenic |
| GTTGTGATTGAGTCCTCTGA+TGG | 0.587631 | 7_4:-50799411 | None:intergenic |
| CCTCACATCAAGACTTGTTG+AGG | 0.587775 | 7_4:-50799598 | None:intergenic |
| CCAAAGTGTTGAAACGACCT+TGG | 0.592907 | 7_4:-50794562 | None:intergenic |
| AATAGGAGTTGAAATACTCA+AGG | 0.594986 | 7_4:-50799643 | None:intergenic |
| CTTCTATATCCGCAAAGCAA+AGG | 0.596306 | 7_4:+50798452 | Msa1160730:CDS |
| CAACTCGGGTGTTGATGTGA+AGG | 0.600481 | 7_4:-50795432 | None:intergenic |
| TGGAGTCCCCATAGATGGCA+AGG | 0.600546 | 7_4:-50799197 | None:intergenic |
| CTACCCAGCTCGCCAAATGG+AGG | 0.609762 | 7_4:+50799261 | Msa1160730:CDS |
| TACAATCCAAACATCAACTC+GGG | 0.610315 | 7_4:-50795446 | None:intergenic |
| ATGAACGTACTGAAACCAGA+TGG | 0.615760 | 7_4:-50794334 | None:intergenic |
| CATCAAGACTTGTTGAGGAG+TGG | 0.616531 | 7_4:-50799593 | None:intergenic |
| AAGTCTTGATGTGAGGATTG+GGG | 0.637862 | 7_4:+50799605 | Msa1160730:three_prime_UTR |
| AGTGGGACTGAGCCTCCAGT+AGG | 0.638593 | 7_4:-50799518 | None:intergenic |
| GGATATAGAAGACATTCAAA+CGG | 0.639224 | 7_4:-50798440 | None:intergenic |
| CCTCAACAAGTCTTGATGTG+AGG | 0.639425 | 7_4:+50799598 | Msa1160730:three_prime_UTR |
| TGAACGTACTGAAACCAGAT+GGG | 0.647169 | 7_4:-50794333 | None:intergenic |
| AATTGGTTCCAATAAACACT+CGG | 0.650758 | 7_4:+50795502 | Msa1160730:CDS |
| ATACAATCCAAACATCAACT+CGG | 0.655682 | 7_4:-50795447 | None:intergenic |
| GGAAAAGGTCCATGTTACCA+GGG | 0.656589 | 7_4:+50798388 | Msa1160730:CDS |
| AACTACTTCAAATAGTAGTG+AGG | 0.659587 | 7_4:-50795714 | None:intergenic |
| TTCTGCAGTAGAACCATCAG+AGG | 0.659637 | 7_4:+50799398 | Msa1160730:CDS |
| GAATTTCCTTGCCATCTATG+GGG | 0.660257 | 7_4:+50799191 | Msa1160730:CDS |
| AACGGTATAAGGAACCGGCA+AGG | 0.663752 | 7_4:-50798422 | None:intergenic |
| CAACAACGAGGAATGTTATG+GGG | 0.670477 | 7_4:+50799227 | Msa1160730:CDS |
| GGCAACAAACATCCTACTGG+AGG | 0.680331 | 7_4:+50799506 | Msa1160730:CDS |
| TTCACTGCGAAGATGAACGG+AGG | 0.686461 | 7_4:+50794310 | Msa1160730:exon |
| CTCCACGCACAACAACAACG+AGG | 0.778347 | 7_4:+50799215 | Msa1160730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTATTAACTAAACAAA+GGG | - | chr7_4:50794779-50794798 | None:intergenic | 10.0% |
| !!! | TACTTTAATTCATATTTTTA+TGG | + | chr7_4:50796405-50796424 | Msa1160730:intron | 10.0% |
| !! | ATATCTAAAAATTAAAGTTA+AGG | - | chr7_4:50799686-50799705 | None:intergenic | 10.0% |
| !! | AAATTGAAAACAACAAAAAA+GGG | - | chr7_4:50794400-50794419 | None:intergenic | 15.0% |
| !! | AAAATTGAAAACAACAAAAA+AGG | - | chr7_4:50794401-50794420 | None:intergenic | 15.0% |
| !! | AAATTATTAACTAAACAAAG+GGG | - | chr7_4:50794778-50794797 | None:intergenic | 15.0% |
| !! | CAAAATTATTAACTAAACAA+AGG | - | chr7_4:50794780-50794799 | None:intergenic | 15.0% |
| !! | TGTATAACTTAGTTAAAAAT+TGG | - | chr7_4:50794832-50794851 | None:intergenic | 15.0% |
| !!! | TAAGTTATACAATTACTTTT+AGG | + | chr7_4:50794841-50794860 | Msa1160730:intron | 15.0% |
| !!! | GTATAAATGTTATGATTTTA+TGG | + | chr7_4:50795111-50795130 | Msa1160730:intron | 15.0% |
| !!! | AAACTTGTTAGTTTATATTT+AGG | + | chr7_4:50795529-50795548 | Msa1160730:intron | 15.0% |
| !! | ATAGCAATTAGATATATAAA+AGG | - | chr7_4:50795616-50795635 | None:intergenic | 15.0% |
| !! | TTAATATTTCATTTAAAGAG+AGG | - | chr7_4:50796034-50796053 | None:intergenic | 15.0% |
| !! | ATGAAAATTTAAAGAGATAT+TGG | + | chr7_4:50796524-50796543 | Msa1160730:intron | 15.0% |
| !! | TAATACTTAAAATACTGAAT+GGG | + | chr7_4:50796697-50796716 | Msa1160730:intron | 15.0% |
| !! | CAATCAAATATATGTAAAAT+AGG | + | chr7_4:50796943-50796962 | Msa1160730:intron | 15.0% |
| !! | TCATATAATTTGACATTAAT+TGG | - | chr7_4:50798614-50798633 | None:intergenic | 15.0% |
| !! | TATTTGAAAGATTTCAAATT+TGG | - | chr7_4:50798837-50798856 | None:intergenic | 15.0% |
| !! | TACAAATTACTTTAAACATA+TGG | + | chr7_4:50799755-50799774 | Msa1160730:three_prime_UTR | 15.0% |
| !! | TGAAAAAGGAAAAATCAAAT+CGG | - | chr7_4:50794605-50794624 | None:intergenic | 20.0% |
| !!! | CAAAAGCATTAAAATGAAAA+AGG | - | chr7_4:50794619-50794638 | None:intergenic | 20.0% |
| !! | AATTATTAACTAAACAAAGG+GGG | - | chr7_4:50794777-50794796 | None:intergenic | 20.0% |
| !! | GAAAAAGTTAAGTAAATCAA+CGG | - | chr7_4:50795037-50795056 | None:intergenic | 20.0% |
| !!! | ATTTACTTAACTTTTTCTCT+TGG | + | chr7_4:50795040-50795059 | Msa1160730:intron | 20.0% |
| !!! | CTTGTTTTTAATTTACATTC+TGG | + | chr7_4:50795136-50795155 | Msa1160730:intron | 20.0% |
| !!! | TATTCTAATTGTACCTTTTA+TGG | + | chr7_4:50795633-50795652 | Msa1160730:intron | 20.0% |
| !!! | ATTCTAATTGTACCTTTTAT+GGG | + | chr7_4:50795634-50795653 | Msa1160730:intron | 20.0% |
| !! | ATATGTAATTGTTAAGTAGT+TGG | + | chr7_4:50796245-50796264 | Msa1160730:intron | 20.0% |
| !!! | ATTCATATTTTTATGGAAGA+AGG | + | chr7_4:50796412-50796431 | Msa1160730:intron | 20.0% |
| !!! | ATTAATTTGATTTTAGACCA+AGG | + | chr7_4:50796472-50796491 | Msa1160730:intron | 20.0% |
| !! | GTAATACTTAAAATACTGAA+TGG | + | chr7_4:50796696-50796715 | Msa1160730:intron | 20.0% |
| !! | AATACTTAAAATACTGAATG+GGG | + | chr7_4:50796698-50796717 | Msa1160730:intron | 20.0% |
| !! | AACAGAAAAGAGAAAAAATA+AGG | - | chr7_4:50796816-50796835 | None:intergenic | 20.0% |
| !! | ATAGGATTTCTGTTTAATAA+CGG | + | chr7_4:50797011-50797030 | Msa1160730:intron | 20.0% |
| !! | TTGGAGATAAAATAATTTCT+AGG | + | chr7_4:50797345-50797364 | Msa1160730:intron | 20.0% |
| !! | TTAAAAAAATCAGTATCTAC+AGG | - | chr7_4:50797974-50797993 | None:intergenic | 20.0% |
| !!! | GTTTCATTATCTTAGTTTTT+AGG | + | chr7_4:50798491-50798510 | Msa1160730:intron | 20.0% |
| !!! | TTTTAGGAACTATGTTTTTA+TGG | + | chr7_4:50798507-50798526 | Msa1160730:intron | 20.0% |
| !! | AATTCTGACTATATCTATAT+AGG | - | chr7_4:50798558-50798577 | None:intergenic | 20.0% |
| !! | TAGAAGTTTGATATTAATGA+TGG | - | chr7_4:50798675-50798694 | None:intergenic | 20.0% |
| !! | TTAAATATGCATCATATAGT+TGG | - | chr7_4:50798795-50798814 | None:intergenic | 20.0% |
| !!! | CATATTTAAACATTGTTTCT+TGG | + | chr7_4:50798806-50798825 | Msa1160730:intron | 20.0% |
| !!! | CTATACTATAACTCTTTTTA+TGG | + | chr7_4:50799301-50799320 | Msa1160730:intron | 20.0% |
| !!! | AACAATCCATATTTTGTTTA+TGG | - | chr7_4:50799552-50799571 | None:intergenic | 20.0% |
| !!! | TAAACAAAATATGGATTGTT+TGG | + | chr7_4:50799552-50799571 | Msa1160730:three_prime_UTR | 20.0% |
| !! | TTAATAGATCAATGAGAATT+AGG | + | chr7_4:50799725-50799744 | Msa1160730:three_prime_UTR | 20.0% |
| !!! | ATGTTTAAAGTAATTTGTAC+AGG | - | chr7_4:50799754-50799773 | None:intergenic | 20.0% |
| !! | TTTATTTATTGTGTGTGAAT+GGG | - | chr7_4:50799912-50799931 | None:intergenic | 20.0% |
| !! | ATTTATTTATTGTGTGTGAA+TGG | - | chr7_4:50799913-50799932 | None:intergenic | 20.0% |
| !! | CGTTTGAATGAAAATTTGTT+CGG | - | chr7_4:50794228-50794247 | None:intergenic | 25.0% |
| ! | CAAAAAAGGGAAAAATGAAA+GGG | - | chr7_4:50794387-50794406 | None:intergenic | 25.0% |
| ! | ACAAAAAAGGGAAAAATGAA+AGG | - | chr7_4:50794388-50794407 | None:intergenic | 25.0% |
| !!! | TTTTGTTACGAAGTGTTTTT+TGG | + | chr7_4:50794418-50794437 | Msa1160730:intron | 25.0% |
| !!! | TTTAATTTACATTCTGGTTC+AGG | + | chr7_4:50795142-50795161 | Msa1160730:intron | 25.0% |
| !! | ATATTATAACTTGTAAGCAC+TGG | + | chr7_4:50795269-50795288 | Msa1160730:intron | 25.0% |
| !! | TTCTAATTGTACCTTTTATG+GGG | + | chr7_4:50795635-50795654 | Msa1160730:intron | 25.0% |
| ! | ATATTTCAAAACCCCATAAA+AGG | - | chr7_4:50795649-50795668 | None:intergenic | 25.0% |
| ! | CAAAAATAGTCAAGAAAACT+CGG | - | chr7_4:50795893-50795912 | None:intergenic | 25.0% |
| !!! | TAAATGGTTATCAGTTTTAG+AGG | + | chr7_4:50796006-50796025 | Msa1160730:intron | 25.0% |
| ! | TAAAAGGCAAAAAACAACTT+GGG | - | chr7_4:50796148-50796167 | None:intergenic | 25.0% |
| ! | TTAAAAGGCAAAAAACAACT+TGG | - | chr7_4:50796149-50796168 | None:intergenic | 25.0% |
| ! | TCTATATCTCAATTCTCAAT+AGG | - | chr7_4:50796290-50796309 | None:intergenic | 25.0% |
| ! | TTGAGAATTGAGATATAGAT+TGG | + | chr7_4:50796291-50796310 | Msa1160730:intron | 25.0% |
| ! | AAAGCTGTTTAATGAAATTG+AGG | + | chr7_4:50796344-50796363 | Msa1160730:intron | 25.0% |
| ! | TAACAAGTAAATTACTTCTG+TGG | - | chr7_4:50796505-50796524 | None:intergenic | 25.0% |
| ! | CTTACAAATCAATAAGAACA+GGG | - | chr7_4:50796584-50796603 | None:intergenic | 25.0% |
| ! | TCTTACAAATCAATAAGAAC+AGG | - | chr7_4:50796585-50796604 | None:intergenic | 25.0% |
| ! | AAAATAAGGAAAGAATGTGA+AGG | - | chr7_4:50796802-50796821 | None:intergenic | 25.0% |
| ! | ATAGACTCTTATTGATCAAT+GGG | - | chr7_4:50796857-50796876 | None:intergenic | 25.0% |
| ! | AAAAACAAAATCTTGACCTT+TGG | - | chr7_4:50797222-50797241 | None:intergenic | 25.0% |
| ! | TCAATTTAGAAGAGATGAAT+TGG | - | chr7_4:50797252-50797271 | None:intergenic | 25.0% |
| ! | ACTCATTTGGTATTACAATA+TGG | - | chr7_4:50797470-50797489 | None:intergenic | 25.0% |
| ! | AAGCATAAGTTTATAATGCT+TGG | - | chr7_4:50797748-50797767 | None:intergenic | 25.0% |
| ! | GAACAGAACTTTAAATATCA+AGG | - | chr7_4:50798060-50798079 | None:intergenic | 25.0% |
| ! | GTACAAATGAAGCAAATATA+AGG | - | chr7_4:50798172-50798191 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTCATGAGTTGAA+TGG | - | chr7_4:50798337-50798356 | None:intergenic | 25.0% |
| ! | ATAAAATTACCTTTGCTTTG+CGG | - | chr7_4:50798464-50798483 | None:intergenic | 25.0% |
| ! | GAAGTATATCAATGAATGAA+TGG | - | chr7_4:50798730-50798749 | None:intergenic | 25.0% |
| ! | GATTCTTCATGAACATTTAT+AGG | + | chr7_4:50798960-50798979 | Msa1160730:intron | 25.0% |
| !! | CATTTATAGGATTTAAGACT+AGG | + | chr7_4:50798973-50798992 | Msa1160730:intron | 25.0% |
| ! | TTCCTTCCATAAACAAAATA+TGG | + | chr7_4:50799543-50799562 | Msa1160730:three_prime_UTR | 25.0% |
| !!! | ATCCATATTTTGTTTATGGA+AGG | - | chr7_4:50799548-50799567 | None:intergenic | 25.0% |
| !!! | ATTGTTTGGAATTTTGATGA+TGG | + | chr7_4:50799566-50799585 | Msa1160730:three_prime_UTR | 25.0% |
| TTCAATGTAATCACATGTGT+CGG | - | chr7_4:50794924-50794943 | None:intergenic | 30.0% | |
| GTGTTTATGGTTCATAAGTT+AGG | + | chr7_4:50794984-50795003 | Msa1160730:intron | 30.0% | |
| TAATCAGTGAACAAATCTGA+TGG | + | chr7_4:50795083-50795102 | Msa1160730:intron | 30.0% | |
| AATCAGTGAACAAATCTGAT+GGG | + | chr7_4:50795084-50795103 | Msa1160730:intron | 30.0% | |
| ATACAATCCAAACATCAACT+CGG | - | chr7_4:50795450-50795469 | None:intergenic | 30.0% | |
| TGTATCTGCTATATTACTTC+AGG | + | chr7_4:50795465-50795484 | Msa1160730:CDS | 30.0% | |
| GTATCTGCTATATTACTTCA+GGG | + | chr7_4:50795466-50795485 | Msa1160730:CDS | 30.0% | |
| ! | AATTGGTTCCAATAAACACT+CGG | + | chr7_4:50795502-50795521 | Msa1160730:CDS | 30.0% |
| AAATAGTAGTGAGGATAACA+TGG | - | chr7_4:50795708-50795727 | None:intergenic | 30.0% | |
| AACTACTTCAAATAGTAGTG+AGG | - | chr7_4:50795717-50795736 | None:intergenic | 30.0% | |
| !! | GAAAGGTATTCTTCTCAATT+TGG | + | chr7_4:50795751-50795770 | Msa1160730:intron | 30.0% |
| GAGATTGATCAAAGTTTAAG+AGG | - | chr7_4:50795795-50795814 | None:intergenic | 30.0% | |
| GACATGCACATTCAAATATA+TGG | - | chr7_4:50795850-50795869 | None:intergenic | 30.0% | |
| CACTTAACTGACATTTGAAA+AGG | - | chr7_4:50795969-50795988 | None:intergenic | 30.0% | |
| TTTCAAATGTCAGTTAAGTG+TGG | + | chr7_4:50795969-50795988 | Msa1160730:intron | 30.0% | |
| CTAGTGAATAGGCTATTAAA+AGG | - | chr7_4:50796164-50796183 | None:intergenic | 30.0% | |
| TAATAGCCTATTCACTAGAA+AGG | + | chr7_4:50796166-50796185 | Msa1160730:intron | 30.0% | |
| ! | AAAAGTACACCCTTTATCTT+AGG | + | chr7_4:50796195-50796214 | Msa1160730:intron | 30.0% |
| AATTGTTAAGTAGTTGGACT+TGG | + | chr7_4:50796251-50796270 | Msa1160730:intron | 30.0% | |
| !! | AATTTGATTTTAGACCAAGG+AGG | + | chr7_4:50796475-50796494 | Msa1160730:intron | 30.0% |
| ! | TTTGTAAGAAGCATACAGAA+AGG | + | chr7_4:50796596-50796615 | Msa1160730:intron | 30.0% |
| AGTATGAAGAGAAATTCCAT+TGG | + | chr7_4:50796765-50796784 | Msa1160730:intron | 30.0% | |
| GATAGACTCTTATTGATCAA+TGG | - | chr7_4:50796858-50796877 | None:intergenic | 30.0% | |
| TTTGCAACATTGAGCATATT+TGG | - | chr7_4:50797081-50797100 | None:intergenic | 30.0% | |
| AAATATGCTCAATGTTGCAA+AGG | + | chr7_4:50797080-50797099 | Msa1160730:intron | 30.0% | |
| !! | ATTTTAGTAGTTCCTTGACA+TGG | + | chr7_4:50797179-50797198 | Msa1160730:intron | 30.0% |
| ! | TTTTAGTAGTTCCTTGACAT+GGG | + | chr7_4:50797180-50797199 | Msa1160730:intron | 30.0% |
| TATGTATTCTTTAAGCCCAA+AGG | + | chr7_4:50797304-50797323 | Msa1160730:intron | 30.0% | |
| ATGTATTCTTTAAGCCCAAA+GGG | + | chr7_4:50797305-50797324 | Msa1160730:intron | 30.0% | |
| GCTCTTTAATAACACTCATT+TGG | - | chr7_4:50797483-50797502 | None:intergenic | 30.0% | |
| TCGAATAGCAGTTATTATAG+CGG | + | chr7_4:50797594-50797613 | Msa1160730:intron | 30.0% | |
| ! | CTATTAACATTGATGACTAG+CGG | + | chr7_4:50797619-50797638 | Msa1160730:intron | 30.0% |
| CTTTCTAAATGAAGACGATT+TGG | - | chr7_4:50797687-50797706 | None:intergenic | 30.0% | |
| TTCATTTAGAAAGTCATCCA+AGG | + | chr7_4:50797694-50797713 | Msa1160730:intron | 30.0% | |
| CAAATCCACAAAACAATCAT+TGG | + | chr7_4:50797827-50797846 | Msa1160730:intron | 30.0% | |
| !! | CATAACCAATGATTGTTTTG+TGG | - | chr7_4:50797835-50797854 | None:intergenic | 30.0% |
| ! | CAAAACAATCATTGGTTATG+AGG | + | chr7_4:50797835-50797854 | Msa1160730:intron | 30.0% |
| ATCCTATCAACAAGTTTGAA+TGG | + | chr7_4:50797863-50797882 | Msa1160730:intron | 30.0% | |
| !! | TACCATTCAAACTTGTTGAT+AGG | - | chr7_4:50797868-50797887 | None:intergenic | 30.0% |
| AATTCTTGCGTAATATGTGT+TGG | - | chr7_4:50797928-50797947 | None:intergenic | 30.0% | |
| CATATTACGCAAGAATTTGA+TGG | + | chr7_4:50797931-50797950 | Msa1160730:intron | 30.0% | |
| AAGTCATTCATATATCTAGC+TGG | + | chr7_4:50798254-50798273 | Msa1160730:CDS | 30.0% | |
| TTCTACTGTCAAAATGGAAA+AGG | + | chr7_4:50798373-50798392 | Msa1160730:CDS | 30.0% | |
| GGATATAGAAGACATTCAAA+CGG | - | chr7_4:50798443-50798462 | None:intergenic | 30.0% | |
| ATGTTCATGAAGAATCATGA+TGG | - | chr7_4:50798956-50798975 | None:intergenic | 30.0% | |
| !! | CATTTAGTTTGCAGCTAAAA+GGG | - | chr7_4:50799008-50799027 | None:intergenic | 30.0% |
| AAGAATGATGAAATGAACTC+CGG | - | chr7_4:50799166-50799185 | None:intergenic | 30.0% | |
| TGTTTATGGAAGGAATTAGT+GGG | - | chr7_4:50799538-50799557 | None:intergenic | 30.0% | |
| TTGTTTATGGAAGGAATTAG+TGG | - | chr7_4:50799539-50799558 | None:intergenic | 30.0% | |
| !!! | TTTGGAATTTTGATGATGGA+AGG | + | chr7_4:50799570-50799589 | Msa1160730:three_prime_UTR | 30.0% |
| AATAGGAGTTGAAATACTCA+AGG | - | chr7_4:50799646-50799665 | None:intergenic | 30.0% | |
| TGAGAAAAATGATCCTCAAT+AGG | - | chr7_4:50799663-50799682 | None:intergenic | 30.0% | |
| !! | AGATATATCCATTTTAGTGC+TGG | + | chr7_4:50799700-50799719 | Msa1160730:three_prime_UTR | 30.0% |
| TATTAACACCAGCACTAAAA+TGG | - | chr7_4:50799711-50799730 | None:intergenic | 30.0% | |
| ! | GTGCTTTTAAATAAACTGCA+TGG | - | chr7_4:50799815-50799834 | None:intergenic | 30.0% |
| CATCAGAGTAACATAGTTAA+TGG | - | chr7_4:50799842-50799861 | None:intergenic | 30.0% | |
| !! | AGCTACGACTTTTTCTTCTT+CGG | - | chr7_4:50794278-50794297 | None:intergenic | 35.0% |
| GGTGTGTGAAAATTGAAGAA+GGG | - | chr7_4:50794366-50794385 | None:intergenic | 35.0% | |
| ! | CGCTTTTCACAATCTTCTTT+GGG | + | chr7_4:50794537-50794556 | Msa1160730:CDS | 35.0% |
| TAGCTTACACTTCTAATCGT+AGG | + | chr7_4:50794868-50794887 | Msa1160730:intron | 35.0% | |
| CATAAACACAGACAAAGACA+CGG | - | chr7_4:50794973-50794992 | None:intergenic | 35.0% | |
| TTTCTCTTGGAGTTGTAACA+AGG | + | chr7_4:50795053-50795072 | Msa1160730:intron | 35.0% | |
| TTCTCTTGGAGTTGTAACAA+GGG | + | chr7_4:50795054-50795073 | Msa1160730:intron | 35.0% | |
| TGTGAAAAATGTCAGAGTTC+CGG | - | chr7_4:50795300-50795319 | None:intergenic | 35.0% | |
| TACAATCCAAACATCAACTC+GGG | - | chr7_4:50795449-50795468 | None:intergenic | 35.0% | |
| ! | AGGGTATTTGAGAGACAAAT+TGG | + | chr7_4:50795485-50795504 | Msa1160730:CDS | 35.0% |
| GTTTCTTACCGAGTGTTTAT+TGG | - | chr7_4:50795513-50795532 | None:intergenic | 35.0% | |
| ACATTACATCAGCAAGAACT+TGG | - | chr7_4:50795592-50795611 | None:intergenic | 35.0% | |
| CAGAACAAGATGTCAATGAA+AGG | + | chr7_4:50796107-50796126 | Msa1160730:intron | 35.0% | |
| ACAAGATGTCAATGAAAGGT+TGG | + | chr7_4:50796111-50796130 | Msa1160730:intron | 35.0% | |
| CTCCTGAATCCTAAGATAAA+GGG | - | chr7_4:50796207-50796226 | None:intergenic | 35.0% | |
| !! | TAGATTGGTCTAGAAGAGAA+TGG | + | chr7_4:50796306-50796325 | Msa1160730:intron | 35.0% |
| CTAGAAGAGAATGGTATAAG+AGG | + | chr7_4:50796315-50796334 | Msa1160730:intron | 35.0% | |
| TGAAAATGACTTGACCAACA+TGG | + | chr7_4:50796552-50796571 | Msa1160730:intron | 35.0% | |
| GAAAATGACTTGACCAACAT+GGG | + | chr7_4:50796553-50796572 | Msa1160730:intron | 35.0% | |
| ! | AAGAGTGTACTACAGAAAGA+AGG | + | chr7_4:50796655-50796674 | Msa1160730:intron | 35.0% |
| TACTACAGAAAGAAGGTGAA+GGG | + | chr7_4:50796662-50796681 | Msa1160730:intron | 35.0% | |
| ATGAAGAGAAATTCCATTGG+AGG | + | chr7_4:50796768-50796787 | Msa1160730:intron | 35.0% | |
| TGAAGAGAAATTCCATTGGA+GGG | + | chr7_4:50796769-50796788 | Msa1160730:intron | 35.0% | |
| TGGAAGGCTCAAAACAATAA+AGG | + | chr7_4:50796897-50796916 | Msa1160730:intron | 35.0% | |
| GGAAGGCTCAAAACAATAAA+GGG | + | chr7_4:50796898-50796917 | Msa1160730:intron | 35.0% | |
| GAAGGCTCAAAACAATAAAG+GGG | + | chr7_4:50796899-50796918 | Msa1160730:intron | 35.0% | |
| GTAAAATAGGATCGTGACTT+AGG | + | chr7_4:50796956-50796975 | Msa1160730:intron | 35.0% | |
| !! | ACTTAGGTTGAGAATACAAG+AGG | + | chr7_4:50796972-50796991 | Msa1160730:intron | 35.0% |
| !! | CTTAGGTTGAGAATACAAGA+GGG | + | chr7_4:50796973-50796992 | Msa1160730:intron | 35.0% |
| !! | TTAGGTTGAGAATACAAGAG+GGG | + | chr7_4:50796974-50796993 | Msa1160730:intron | 35.0% |
| TAAACAGAAATCCTATACCG+AGG | - | chr7_4:50797007-50797026 | None:intergenic | 35.0% | |
| !! | TTTGGTTGTTAGCTTTGTAC+TGG | - | chr7_4:50797063-50797082 | None:intergenic | 35.0% |
| ! | CAAAGGTGCAAATGTTACAA+TGG | + | chr7_4:50797097-50797116 | Msa1160730:intron | 35.0% |
| TTTAGTAGTTCCTTGACATG+GGG | + | chr7_4:50797181-50797200 | Msa1160730:intron | 35.0% | |
| TTTCATGTGAAAGACCCTTT+GGG | - | chr7_4:50797322-50797341 | None:intergenic | 35.0% | |
| ATTTCATGTGAAAGACCCTT+TGG | - | chr7_4:50797323-50797342 | None:intergenic | 35.0% | |
| AAAGGGTCTTTCACATGAAA+TGG | + | chr7_4:50797322-50797341 | Msa1160730:intron | 35.0% | |
| GTGGTCTAAAGATGTTAGTT+AGG | - | chr7_4:50797377-50797396 | None:intergenic | 35.0% | |
| TTCTCAGCTCTTGAGATAAA+TGG | - | chr7_4:50797407-50797426 | None:intergenic | 35.0% | |
| !! | TGGTTTGTTCAAATTCAGCT+AGG | - | chr7_4:50797523-50797542 | None:intergenic | 35.0% |
| CGTATCGAATTACAGTATCA+CGG | - | chr7_4:50797554-50797573 | None:intergenic | 35.0% | |
| TTTAGAAAGTCATCCAAGGT+TGG | + | chr7_4:50797698-50797717 | Msa1160730:intron | 35.0% | |
| CATTTGCACTGTAAAGAAGA+AGG | - | chr7_4:50797904-50797923 | None:intergenic | 35.0% | |
| CTTCTTCTTTACAGTGCAAA+TGG | + | chr7_4:50797902-50797921 | Msa1160730:intron | 35.0% | |
| GAAGCAAATATAAGGCCATA+AGG | - | chr7_4:50798164-50798183 | None:intergenic | 35.0% | |
| TGAATGACTTATCTGAGAAG+TGG | - | chr7_4:50798244-50798263 | None:intergenic | 35.0% | |
| AGGTTAGTACAGCTTAGTTA+TGG | + | chr7_4:50798282-50798301 | Msa1160730:intron | 35.0% | |
| GGTTAGTACAGCTTAGTTAT+GGG | + | chr7_4:50798283-50798302 | Msa1160730:intron | 35.0% | |
| ! | TTTCATGAGTTGAATGGTTC+TGG | - | chr7_4:50798331-50798350 | None:intergenic | 35.0% |
| TGTAGCTTCTACTGTCAAAA+TGG | + | chr7_4:50798367-50798386 | Msa1160730:intron | 35.0% | |
| ATTCAAACGGTATAAGGAAC+CGG | - | chr7_4:50798430-50798449 | None:intergenic | 35.0% | |
| GAAGACATTCAAACGGTATA+AGG | - | chr7_4:50798436-50798455 | None:intergenic | 35.0% | |
| GATTAACATCGATGTTGAGT+TGG | + | chr7_4:50798643-50798662 | Msa1160730:intron | 35.0% | |
| TATGCATCATATAGTTGGCA+TGG | - | chr7_4:50798790-50798809 | None:intergenic | 35.0% | |
| TTCTGAGTGCATTAGTTGAT+AGG | + | chr7_4:50798875-50798894 | Msa1160730:intron | 35.0% | |
| !! | GCATTTAGTTTGCAGCTAAA+AGG | - | chr7_4:50799009-50799028 | None:intergenic | 35.0% |
| AGAATGATGAAATGAACTCC+GGG | - | chr7_4:50799165-50799184 | None:intergenic | 35.0% | |
| AACAACAACGAGGAATGTTA+TGG | + | chr7_4:50799225-50799244 | Msa1160730:CDS | 35.0% | |
| ACAACAACGAGGAATGTTAT+GGG | + | chr7_4:50799226-50799245 | Msa1160730:CDS | 35.0% | |
| AAGTAAAACTTGCCTCCATT+TGG | - | chr7_4:50799276-50799295 | None:intergenic | 35.0% | |
| ! | AATCACAACCCTTGTTTCAA+TGG | + | chr7_4:50799425-50799444 | Msa1160730:CDS | 35.0% |
| ! | ATCACAACCCTTGTTTCAAT+GGG | + | chr7_4:50799426-50799445 | Msa1160730:CDS | 35.0% |
| GTCAAATCCCATTGAAACAA+GGG | - | chr7_4:50799436-50799455 | None:intergenic | 35.0% | |
| TGTCAAATCCCATTGAAACA+AGG | - | chr7_4:50799437-50799456 | None:intergenic | 35.0% | |
| TTGTTTCAATGGGATTTGAC+AGG | + | chr7_4:50799436-50799455 | Msa1160730:CDS | 35.0% | |
| GAGTATTTCAACTCCTATTG+AGG | + | chr7_4:50799647-50799666 | Msa1160730:three_prime_UTR | 35.0% | |
| GGAACAATATCTCTAGTAAG+AGG | - | chr7_4:50799794-50799813 | None:intergenic | 35.0% | |
| ! | TTATTGTGTGTGAATGGGTT+CGG | - | chr7_4:50799907-50799926 | None:intergenic | 35.0% |
| TTCTTCACTGCGAAGATGAA+CGG | + | chr7_4:50794307-50794326 | Msa1160730:exon | 40.0% | |
| TGAACGTACTGAAACCAGAT+GGG | - | chr7_4:50794336-50794355 | None:intergenic | 40.0% | |
| ATGAACGTACTGAAACCAGA+TGG | - | chr7_4:50794337-50794356 | None:intergenic | 40.0% | |
| GGGTGTGTGAAAATTGAAGA+AGG | - | chr7_4:50794367-50794386 | None:intergenic | 40.0% | |
| AGCAAATGCTCCTGTTACAA+GGG | + | chr7_4:50794496-50794515 | Msa1160730:intron | 40.0% | |
| ATGATGAAAGCCCTTGTAAC+AGG | - | chr7_4:50794509-50794528 | None:intergenic | 40.0% | |
| ! | GCGCTTTTCACAATCTTCTT+TGG | + | chr7_4:50794536-50794555 | Msa1160730:CDS | 40.0% |
| !! | ACAATCTTCTTTGGGATCCA+AGG | + | chr7_4:50794545-50794564 | Msa1160730:CDS | 40.0% |
| CAAGGTCGTTTCAACACTTT+GGG | + | chr7_4:50794563-50794582 | Msa1160730:CDS | 40.0% | |
| CGTGTCTTTGTCTGTGTTTA+TGG | + | chr7_4:50794971-50794990 | Msa1160730:intron | 40.0% | |
| TGGTTCAGGATAGAACACTA+TGG | + | chr7_4:50795156-50795175 | Msa1160730:intron | 40.0% | |
| CTTATCTCACTAAGTGTGGT+TGG | - | chr7_4:50795201-50795220 | None:intergenic | 40.0% | |
| CAACCACACTTAGTGAGATA+AGG | + | chr7_4:50795199-50795218 | Msa1160730:intron | 40.0% | |
| ! | AAGCCTTATCTCACTAAGTG+TGG | - | chr7_4:50795205-50795224 | None:intergenic | 40.0% |
| ACACTTAGTGAGATAAGGCT+TGG | + | chr7_4:50795204-50795223 | Msa1160730:intron | 40.0% | |
| ! | TCTTTGGAAAGCTTCGCATA+TGG | + | chr7_4:50795387-50795406 | Msa1160730:CDS | 40.0% |
| ! | GTTGCTGTAGCACTTTTGAA+AGG | + | chr7_4:50795734-50795753 | Msa1160730:CDS | 40.0% |
| TCAGTTAAGTGTGGATCACA+CGG | + | chr7_4:50795978-50795997 | Msa1160730:intron | 40.0% | |
| AACTTCCGTGAGGATAAAGA+GGG | + | chr7_4:50796070-50796089 | Msa1160730:intron | 40.0% | |
| CTTTACCCTCTTTATCCTCA+CGG | - | chr7_4:50796078-50796097 | None:intergenic | 40.0% | |
| GGATAAAGAGGGTAAAGTCT+TGG | + | chr7_4:50796081-50796100 | Msa1160730:intron | 40.0% | |
| TAGCCTATTCACTAGAAAGG+AGG | + | chr7_4:50796169-50796188 | Msa1160730:intron | 40.0% | |
| ! | AGACCTCCTTTCTAGTGAAT+AGG | - | chr7_4:50796175-50796194 | None:intergenic | 40.0% |
| CACCCTTTATCTTAGGATTC+AGG | + | chr7_4:50796202-50796221 | Msa1160730:intron | 40.0% | |
| CCTCCTGAATCCTAAGATAA+AGG | - | chr7_4:50796208-50796227 | None:intergenic | 40.0% | |
| CCTTTATCTTAGGATTCAGG+AGG | + | chr7_4:50796205-50796224 | Msa1160730:intron | 40.0% | |
| TAAGTAGTTGGACTTGGACT+AGG | + | chr7_4:50796257-50796276 | Msa1160730:intron | 40.0% | |
| ATGTATGACGAATGAGAGTG+AGG | + | chr7_4:50796376-50796395 | Msa1160730:intron | 40.0% | |
| TGTATGACGAATGAGAGTGA+GGG | + | chr7_4:50796377-50796396 | Msa1160730:intron | 40.0% | |
| !! | AGCATACAGAAAGGTGTTGT+TGG | + | chr7_4:50796605-50796624 | Msa1160730:intron | 40.0% |
| GTACTACAGAAAGAAGGTGA+AGG | + | chr7_4:50796661-50796680 | Msa1160730:intron | 40.0% | |
| ! | TAGGTTGAGAATACAAGAGG+GGG | + | chr7_4:50796975-50796994 | Msa1160730:intron | 40.0% |
| ACTGCAACAATAGGATCAAG+TGG | + | chr7_4:50797128-50797147 | Msa1160730:intron | 40.0% | |
| CTGCAACAATAGGATCAAGT+GGG | + | chr7_4:50797129-50797148 | Msa1160730:intron | 40.0% | |
| ! | GCTGCAATCTGTTTTACCAA+AGG | + | chr7_4:50797203-50797222 | Msa1160730:intron | 40.0% |
| GGTCTTTCACATGAAATGGT+TGG | + | chr7_4:50797326-50797345 | Msa1160730:intron | 40.0% | |
| TGAGATAAATGGAGATGTCG+TGG | - | chr7_4:50797396-50797415 | None:intergenic | 40.0% | |
| AAGAGCTGAGAATATTCAGC+TGG | + | chr7_4:50797415-50797434 | Msa1160730:intron | 40.0% | |
| ACAGTATCACGGAACAGTAA+TGG | - | chr7_4:50797543-50797562 | None:intergenic | 40.0% | |
| TTGTCGATCGCAGAAAATAG+TGG | - | chr7_4:50797657-50797676 | None:intergenic | 40.0% | |
| AAAGTCATCCAAGGTTGGAA+AGG | + | chr7_4:50797703-50797722 | Msa1160730:intron | 40.0% | |
| AACATTGAATGCTGAGACCA+GGG | - | chr7_4:50797783-50797802 | None:intergenic | 40.0% | |
| ! | TACGCAAGAATTTGATGGCA+TGG | + | chr7_4:50797936-50797955 | Msa1160730:intron | 40.0% |
| AATATAAGGCCATAAGGTCC+AGG | - | chr7_4:50798158-50798177 | None:intergenic | 40.0% | |
| ACGGGAATGTCAGAGAAAAA+GGG | - | chr7_4:50798194-50798213 | None:intergenic | 40.0% | |
| AACGGGAATGTCAGAGAAAA+AGG | - | chr7_4:50798195-50798214 | None:intergenic | 40.0% | |
| AGAAGTGGAAACCACAAATC+CGG | - | chr7_4:50798229-50798248 | None:intergenic | 40.0% | |
| !! | CATATATCTAGCTGGTCTTC+AGG | + | chr7_4:50798262-50798281 | Msa1160730:CDS | 40.0% |
| CTTCTATATCCGCAAAGCAA+AGG | + | chr7_4:50798452-50798471 | Msa1160730:CDS | 40.0% | |
| CTATATAGGCGCATTCCTTT+GGG | - | chr7_4:50798544-50798563 | None:intergenic | 40.0% | |
| TCTATATAGGCGCATTCCTT+TGG | - | chr7_4:50798545-50798564 | None:intergenic | 40.0% | |
| ! | TAGTTTGCAGCTAAAAGGGA+AGG | - | chr7_4:50799004-50799023 | None:intergenic | 40.0% |
| TGAACCTACATTACAGTTCC+CGG | + | chr7_4:50799144-50799163 | Msa1160730:intron | 40.0% | |
| ACGAATTTCCTTGCCATCTA+TGG | + | chr7_4:50799189-50799208 | Msa1160730:CDS | 40.0% | |
| CGAATTTCCTTGCCATCTAT+GGG | + | chr7_4:50799190-50799209 | Msa1160730:CDS | 40.0% | |
| GAATTTCCTTGCCATCTATG+GGG | + | chr7_4:50799191-50799210 | Msa1160730:CDS | 40.0% | |
| CAACAACGAGGAATGTTATG+GGG | + | chr7_4:50799227-50799246 | Msa1160730:CDS | 40.0% | |
| !!! | CTTTTTTGACTCACTGAGCA+TGG | + | chr7_4:50799339-50799358 | Msa1160730:intron | 40.0% |
| CTTTGTGCAGAGAAACTATC+CGG | + | chr7_4:50799365-50799384 | Msa1160730:intron | 40.0% | |
| ACAAGTCTTGATGTGAGGAT+TGG | + | chr7_4:50799603-50799622 | Msa1160730:three_prime_UTR | 40.0% | |
| CAAGTCTTGATGTGAGGATT+GGG | + | chr7_4:50799604-50799623 | Msa1160730:three_prime_UTR | 40.0% | |
| AAGTCTTGATGTGAGGATTG+GGG | + | chr7_4:50799605-50799624 | Msa1160730:three_prime_UTR | 40.0% | |
| ACTCTGATGAGTAGTGCTTA+CGG | + | chr7_4:50799853-50799872 | Msa1160730:three_prime_UTR | 40.0% | |
| TCTTCGCAGTGAAGAAGAAG+AGG | - | chr7_4:50794303-50794322 | None:intergenic | 45.0% | |
| CAGCAAATGCTCCTGTTACA+AGG | + | chr7_4:50794495-50794514 | Msa1160730:intron | 45.0% | |
| !! | CCAAAGTGTTGAAACGACCT+TGG | - | chr7_4:50794565-50794584 | None:intergenic | 45.0% |
| CCAAGGTCGTTTCAACACTT+TGG | + | chr7_4:50794562-50794581 | Msa1160730:CDS | 45.0% | |
| CACTTTGGGCTTGTCTTATC+AGG | + | chr7_4:50794577-50794596 | Msa1160730:CDS | 45.0% | |
| ACAGACAAAGACACGGACAT+CGG | - | chr7_4:50794966-50794985 | None:intergenic | 45.0% | |
| ACTAAGTGTGGTTGGCAACA+TGG | - | chr7_4:50795193-50795212 | None:intergenic | 45.0% | |
| !! | CTTGTAAGCACTGGAAACAC+CGG | + | chr7_4:50795278-50795297 | Msa1160730:intron | 45.0% |
| ! | GAGTTGTGTTGTTCTTGCTC+TGG | + | chr7_4:50795357-50795376 | Msa1160730:intron | 45.0% |
| TTGCTCTGGCAGGATATCTT+TGG | + | chr7_4:50795371-50795390 | Msa1160730:intron | 45.0% | |
| !! | TCAACACCCGAGTTGATGTT+TGG | + | chr7_4:50795440-50795459 | Msa1160730:CDS | 45.0% |
| CAGTTAAGTGTGGATCACAC+GGG | + | chr7_4:50795979-50795998 | Msa1160730:intron | 45.0% | |
| GGATCACACGGGATGATAAA+TGG | + | chr7_4:50795990-50796009 | Msa1160730:intron | 45.0% | |
| CACATCTTTGAACTTCCGTG+AGG | + | chr7_4:50796060-50796079 | Msa1160730:intron | 45.0% | |
| GAACTTCCGTGAGGATAAAG+AGG | + | chr7_4:50796069-50796088 | Msa1160730:intron | 45.0% | |
| TATCTTAGGATTCAGGAGGC+TGG | + | chr7_4:50796209-50796228 | Msa1160730:intron | 45.0% | |
| ATCTTAGGATTCAGGAGGCT+GGG | + | chr7_4:50796210-50796229 | Msa1160730:intron | 45.0% | |
| !! | AAGGTGTTGTTGGCGATCAA+CGG | + | chr7_4:50796615-50796634 | Msa1160730:intron | 45.0% |
| TGAATGGGGAGCAGAAGTTA+GGG | + | chr7_4:50796712-50796731 | Msa1160730:intron | 45.0% | |
| GAAGGCTATTTACCCTCCAA+TGG | - | chr7_4:50796784-50796803 | None:intergenic | 45.0% | |
| !! | CAGTGCCAACAGAGGTATTA+TGG | + | chr7_4:50796877-50796896 | Msa1160730:intron | 45.0% |
| !! | GCCAACAGAGGTATTATGGA+AGG | + | chr7_4:50796881-50796900 | Msa1160730:intron | 45.0% |
| GCCTTCCATAATACCTCTGT+TGG | - | chr7_4:50796885-50796904 | None:intergenic | 45.0% | |
| GAAATCCTATACCGAGGAAG+TGG | - | chr7_4:50797001-50797020 | None:intergenic | 45.0% | |
| GACAAGTGCACTGCAACAAT+AGG | + | chr7_4:50797119-50797138 | Msa1160730:intron | 45.0% | |
| AATTCAGACGCATTGTGCAG+TGG | + | chr7_4:50797271-50797290 | Msa1160730:intron | 45.0% | |
| ACACACAACCTTTCCAACCT+TGG | - | chr7_4:50797714-50797733 | None:intergenic | 45.0% | |
| GAACATTGAATGCTGAGACC+AGG | - | chr7_4:50797784-50797803 | None:intergenic | 45.0% | |
| TGCACTGTAAAGAAGAAGGC+AGG | - | chr7_4:50797900-50797919 | None:intergenic | 45.0% | |
| ATAAGGTCCAGGAGTGACTA+GGG | - | chr7_4:50798147-50798166 | None:intergenic | 45.0% | |
| CTGACATTCCCGTTTCAACA+CGG | + | chr7_4:50798201-50798220 | Msa1160730:CDS | 45.0% | |
| AATCCGGAACCGTGTTGAAA+CGG | - | chr7_4:50798213-50798232 | None:intergenic | 45.0% | |
| !! | GAGTTGAATGGTTCTGGACA+TGG | - | chr7_4:50798325-50798344 | None:intergenic | 45.0% |
| TGGAAAAGGTCCATGTTACC+AGG | + | chr7_4:50798387-50798406 | Msa1160730:CDS | 45.0% | |
| GGAAAAGGTCCATGTTACCA+GGG | + | chr7_4:50798388-50798407 | Msa1160730:CDS | 45.0% | |
| ATGGACACAAGCTTTCCCAA+AGG | + | chr7_4:50798526-50798545 | Msa1160730:intron | 45.0% | |
| GCATGAGTGAATTGTCACGT+GGG | - | chr7_4:50798909-50798928 | None:intergenic | 45.0% | |
| TGCATGAGTGAATTGTCACG+TGG | - | chr7_4:50798910-50798929 | None:intergenic | 45.0% | |
| AACTCCGGGAACTGTAATGT+AGG | - | chr7_4:50799151-50799170 | None:intergenic | 45.0% | |
| TTCTGCAGTAGAACCATCAG+AGG | + | chr7_4:50799398-50799417 | Msa1160730:CDS | 45.0% | |
| GTTGTGATTGAGTCCTCTGA+TGG | - | chr7_4:50799414-50799433 | None:intergenic | 45.0% | |
| TGTGGCAACAAACATCCTAC+TGG | + | chr7_4:50799503-50799522 | Msa1160730:CDS | 45.0% | |
| !! | CATCAAGACTTGTTGAGGAG+TGG | - | chr7_4:50799596-50799615 | None:intergenic | 45.0% |
| !! | CCTCACATCAAGACTTGTTG+AGG | - | chr7_4:50799601-50799620 | None:intergenic | 45.0% |
| CCTCAACAAGTCTTGATGTG+AGG | + | chr7_4:50799598-50799617 | Msa1160730:three_prime_UTR | 45.0% | |
| TTCACTGCGAAGATGAACGG+AGG | + | chr7_4:50794310-50794329 | Msa1160730:exon | 50.0% | |
| ! | TGTGTTGTTCTTGCTCTGGC+AGG | + | chr7_4:50795361-50795380 | Msa1160730:intron | 50.0% |
| !! | CAACTCGGGTGTTGATGTGA+AGG | - | chr7_4:50795435-50795454 | None:intergenic | 50.0% |
| ! | ATGTGACGCACTCTTTTCGC+AGG | + | chr7_4:50795667-50795686 | Msa1160730:intron | 50.0% |
| TCTTAGGATTCAGGAGGCTG+GGG | + | chr7_4:50796211-50796230 | Msa1160730:intron | 50.0% | |
| ACTTCTGTGGTCAACCTCCT+TGG | - | chr7_4:50796492-50796511 | None:intergenic | 50.0% | |
| GAACAGGGTTTGACCCATGT+TGG | - | chr7_4:50796569-50796588 | None:intergenic | 50.0% | |
| !! | AGGTGTTGTTGGCGATCAAC+GGG | + | chr7_4:50796616-50796635 | Msa1160730:intron | 50.0% |
| CACTCTTAACAACAGCCCCT+GGG | - | chr7_4:50796642-50796661 | None:intergenic | 50.0% | |
| ACACTCTTAACAACAGCCCC+TGG | - | chr7_4:50796643-50796662 | None:intergenic | 50.0% | |
| CTGAATGGGGAGCAGAAGTT+AGG | + | chr7_4:50796711-50796730 | Msa1160730:intron | 50.0% | |
| GAGTCTATCAGTGCCAACAG+AGG | + | chr7_4:50796869-50796888 | Msa1160730:intron | 50.0% | |
| TGCTTCAAATCCAGACACCC+TGG | + | chr7_4:50797763-50797782 | Msa1160730:intron | 50.0% | |
| GGAGTGACTAGGGTTGTTGA+AGG | - | chr7_4:50798137-50798156 | None:intergenic | 50.0% | |
| TCAACAACCCTAGTCACTCC+TGG | + | chr7_4:50798137-50798156 | Msa1160730:CDS | 50.0% | |
| CATAAGGTCCAGGAGTGACT+AGG | - | chr7_4:50798148-50798167 | None:intergenic | 50.0% | |
| CTAGTCACTCCTGGACCTTA+TGG | + | chr7_4:50798146-50798165 | Msa1160730:CDS | 50.0% | |
| TTCCCGTTTCAACACGGTTC+CGG | + | chr7_4:50798207-50798226 | Msa1160730:CDS | 50.0% | |
| ATCCGGAACCGTGTTGAAAC+GGG | - | chr7_4:50798212-50798231 | None:intergenic | 50.0% | |
| TCAACACGGTTCCGGATTTG+TGG | + | chr7_4:50798215-50798234 | Msa1160730:CDS | 50.0% | |
| TCCATGTTACCAGGGATGTG+TGG | + | chr7_4:50798396-50798415 | Msa1160730:CDS | 50.0% | |
| AACGGTATAAGGAACCGGCA+AGG | - | chr7_4:50798425-50798444 | None:intergenic | 50.0% | |
| GGTTCTACTGCAGAATGCGT+TGG | - | chr7_4:50799393-50799412 | None:intergenic | 50.0% | |
| TGCCACATTCACGTCGTTTC+TGG | - | chr7_4:50799490-50799509 | None:intergenic | 50.0% | |
| GGCAACAAACATCCTACTGG+AGG | + | chr7_4:50799506-50799525 | Msa1160730:CDS | 50.0% | |
| AAGATGAACGGAGGCCCATC+TGG | + | chr7_4:50794319-50794338 | Msa1160730:exon | 55.0% | |
| TGGGGAGCAGAAGTTAGGGT+AGG | + | chr7_4:50796716-50796735 | Msa1160730:intron | 55.0% | |
| CAGATTGCAGCCCCATGTCA+AGG | - | chr7_4:50797194-50797213 | None:intergenic | 55.0% | |
| ! | AATGCTGAGACCAGGGTGTC+TGG | - | chr7_4:50797776-50797795 | None:intergenic | 55.0% |
| GCCACACATCCCTGGTAACA+TGG | - | chr7_4:50798400-50798419 | None:intergenic | 55.0% | |
| ATTTGGCGAGCTGGGTAGGA+TGG | - | chr7_4:50799259-50799278 | None:intergenic | 55.0% | |
| ATCCTACCCAGCTCGCCAAA+TGG | + | chr7_4:50799258-50799277 | Msa1160730:CDS | 55.0% | |
| TTGCCTCCATTTGGCGAGCT+GGG | - | chr7_4:50799267-50799286 | None:intergenic | 55.0% | |
| ACTGCAGAATGCGTTGGAGC+CGG | - | chr7_4:50799387-50799406 | None:intergenic | 55.0% | |
| !! | GTCGTTTCTGGCCTGCACTA+GGG | - | chr7_4:50799478-50799497 | None:intergenic | 55.0% |
| GGCCAGAAACGACGTGAATG+TGG | + | chr7_4:50799485-50799504 | Msa1160730:CDS | 55.0% | |
| ACAAGAGGGGGCCACTTCCT+CGG | + | chr7_4:50796987-50797006 | Msa1160730:intron | 60.0% | |
| GCAAGGATGCCACACATCCC+TGG | - | chr7_4:50798408-50798427 | None:intergenic | 60.0% | |
| GGGATGTGTGGCATCCTTGC+CGG | + | chr7_4:50798408-50798427 | Msa1160730:CDS | 60.0% | |
| CTCCATTTGGCGAGCTGGGT+AGG | - | chr7_4:50799263-50799282 | None:intergenic | 60.0% | |
| CTACCCAGCTCGCCAAATGG+AGG | + | chr7_4:50799261-50799280 | Msa1160730:CDS | 60.0% | |
| CTTGCCTCCATTTGGCGAGC+TGG | - | chr7_4:50799268-50799287 | None:intergenic | 60.0% | |
| TGCCAGACAAGCCCTAGTGC+AGG | + | chr7_4:50799464-50799483 | Msa1160730:CDS | 60.0% | |
| !! | CGTCGTTTCTGGCCTGCACT+AGG | - | chr7_4:50799479-50799498 | None:intergenic | 60.0% |
| AGTGGGACTGAGCCTCCAGT+AGG | - | chr7_4:50799521-50799540 | None:intergenic | 60.0% | |
| TGTTGGCGATCAACGGGCCC+AGG | + | chr7_4:50796622-50796641 | Msa1160730:intron | 65.0% | |
| GTTGGCGATCAACGGGCCCA+GGG | + | chr7_4:50796623-50796642 | Msa1160730:intron | 65.0% | |
| TTGGCGATCAACGGGCCCAG+GGG | + | chr7_4:50796624-50796643 | Msa1160730:intron | 65.0% | |
| GGGGGCCACTTCCTCGGTAT+AGG | + | chr7_4:50796993-50797012 | Msa1160730:intron | 65.0% | |
| GGCCTGCACTAGGGCTTGTC+TGG | - | chr7_4:50799469-50799488 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 50794219 | 50799951 | 50794219 | ID=Msa1160730;Name=Msa1160730 |
| chr7_4 | mRNA | 50794219 | 50799951 | 50794219 | ID=Msa1160730-mRNA-1;Parent=Msa1160730;Name=Msa1160730-mRNA-1;_AED=0.10;_eAED=0.10;_QI=103|1|1|1|0.87|0.77|9|378|292 |
| chr7_4 | exon | 50794219 | 50794346 | 50794219 | ID=Msa1160730-mRNA-1:exon:14219;Parent=Msa1160730-mRNA-1 |
| chr7_4 | exon | 50794498 | 50794598 | 50794498 | ID=Msa1160730-mRNA-1:exon:14220;Parent=Msa1160730-mRNA-1 |
| chr7_4 | exon | 50795383 | 50795523 | 50795383 | ID=Msa1160730-mRNA-1:exon:14221;Parent=Msa1160730-mRNA-1 |
| chr7_4 | exon | 50795689 | 50795755 | 50795689 | ID=Msa1160730-mRNA-1:exon:14222;Parent=Msa1160730-mRNA-1 |
| chr7_4 | exon | 50798132 | 50798283 | 50798132 | ID=Msa1160730-mRNA-1:exon:14223;Parent=Msa1160730-mRNA-1 |
| chr7_4 | exon | 50798372 | 50798473 | 50798372 | ID=Msa1160730-mRNA-1:exon:14224;Parent=Msa1160730-mRNA-1 |
| chr7_4 | exon | 50799160 | 50799282 | 50799160 | ID=Msa1160730-mRNA-1:exon:14225;Parent=Msa1160730-mRNA-1 |
| chr7_4 | exon | 50799375 | 50799784 | 50799375 | ID=Msa1160730-mRNA-1:exon:14226;Parent=Msa1160730-mRNA-1 |
| chr7_4 | exon | 50799816 | 50799951 | 50799816 | ID=Msa1160730-mRNA-1:exon:14227;Parent=Msa1160730-mRNA-1 |
| chr7_4 | five_prime_UTR | 50794219 | 50794321 | 50794219 | ID=Msa1160730-mRNA-1:five_prime_utr;Parent=Msa1160730-mRNA-1 |
| chr7_4 | CDS | 50794322 | 50794346 | 50794322 | ID=Msa1160730-mRNA-1:cds;Parent=Msa1160730-mRNA-1 |
| chr7_4 | CDS | 50794498 | 50794598 | 50794498 | ID=Msa1160730-mRNA-1:cds;Parent=Msa1160730-mRNA-1 |
| chr7_4 | CDS | 50795383 | 50795523 | 50795383 | ID=Msa1160730-mRNA-1:cds;Parent=Msa1160730-mRNA-1 |
| chr7_4 | CDS | 50795689 | 50795755 | 50795689 | ID=Msa1160730-mRNA-1:cds;Parent=Msa1160730-mRNA-1 |
| chr7_4 | CDS | 50798132 | 50798283 | 50798132 | ID=Msa1160730-mRNA-1:cds;Parent=Msa1160730-mRNA-1 |
| chr7_4 | CDS | 50798372 | 50798473 | 50798372 | ID=Msa1160730-mRNA-1:cds;Parent=Msa1160730-mRNA-1 |
| chr7_4 | CDS | 50799160 | 50799282 | 50799160 | ID=Msa1160730-mRNA-1:cds;Parent=Msa1160730-mRNA-1 |
| chr7_4 | CDS | 50799375 | 50799542 | 50799375 | ID=Msa1160730-mRNA-1:cds;Parent=Msa1160730-mRNA-1 |
| chr7_4 | three_prime_UTR | 50799543 | 50799784 | 50799543 | ID=Msa1160730-mRNA-1:three_prime_utr;Parent=Msa1160730-mRNA-1 |
| chr7_4 | three_prime_UTR | 50799816 | 50799951 | 50799816 | ID=Msa1160730-mRNA-1:three_prime_utr;Parent=Msa1160730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
