Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124500 | XP_013450023.1 | 96.795 | 312 | 10 | 0 | 1 | 312 | 1 | 312 | 0.0 | 610 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124500 | sp|Q42529|TRPA2_ARATH | 75.719 | 313 | 72 | 3 | 1 | 311 | 1 | 311 | 2.65e-158 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124500 | A0A072U3U9 | 96.795 | 312 | 10 | 0 | 1 | 312 | 1 | 312 | 0.0 | 610 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0199800 | Msa1124500 | 0.801167 | 1.023260e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124500 | MtrunA17_Chr7g0264921 | 96.795 | 312 | 10 | 0 | 1 | 312 | 1 | 312 | 0.0 | 610 |
| Msa1124500 | MtrunA17_Chr7g0260611 | 71.910 | 356 | 56 | 2 | 1 | 312 | 1 | 356 | 4.55e-172 | 481 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124500 | AT3G54640.1 | 75.719 | 313 | 72 | 3 | 1 | 311 | 1 | 311 | 2.69e-159 | 447 |
| Msa1124500 | AT4G02610.1 | 79.167 | 264 | 55 | 0 | 48 | 311 | 10 | 273 | 1.67e-157 | 441 |
Find 110 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCCTGTGGCAGTTGGTTT+TGG | 0.178344 | 7_3:+75655509 | Msa1124500:CDS |
| GGCAGATGGTCCTGTTATTC+AGG | 0.191786 | 7_3:+75651655 | Msa1124500:CDS |
| CCAGTACCACGCTTCAATAT+TGG | 0.221312 | 7_3:-75652737 | None:intergenic |
| CAGTCCCTCTTGAGGAGATT+TGG | 0.225486 | 7_3:-75655745 | None:intergenic |
| CAGTACCACGCTTCAATATT+GGG | 0.280496 | 7_3:-75652736 | None:intergenic |
| CATAAATGATGGATTGAATA+AGG | 0.297249 | 7_3:+75655883 | Msa1124500:three_prime_UTR |
| AGAAATAATTGAATCAAAAT+TGG | 0.332962 | 7_3:-75651781 | None:intergenic |
| AAGAATGAAACCTGAATAAC+AGG | 0.333495 | 7_3:-75651665 | None:intergenic |
| TGAAGTCCGGCGGTGTTTAC+CGG | 0.346590 | 7_3:-75650833 | None:intergenic |
| CACTTGATTGAAATTATGTA+TGG | 0.355731 | 7_3:+75655805 | Msa1124500:exon |
| GTGAGCTCTGTTGGGGTCAC+TGG | 0.358963 | 7_3:+75655041 | Msa1124500:CDS |
| CCAATATTGAAGCGTGGTAC+TGG | 0.378232 | 7_3:+75652737 | Msa1124500:CDS |
| TGTGGCTGCTATCAAGACTA+TGG | 0.383890 | 7_3:+75651196 | Msa1124500:CDS |
| GTCAGTTAGTGGTAAAGTTC+AGG | 0.396028 | 7_3:+75655073 | Msa1124500:CDS |
| AAATTATAGGTGAGCTCTGT+TGG | 0.396271 | 7_3:+75655032 | Msa1124500:intron |
| CGTTCCATACTCTGATCCTT+TGG | 0.401419 | 7_3:+75651634 | Msa1124500:CDS |
| AATTATAGGTGAGCTCTGTT+GGG | 0.405229 | 7_3:+75655033 | Msa1124500:intron |
| GTAAGAGACACTGGCGTTCA+TGG | 0.425515 | 7_3:+75652776 | Msa1124500:CDS |
| GAATCTCTGAAACATTCAAC+AGG | 0.435864 | 7_3:+75651228 | Msa1124500:CDS |
| GATCACCGGCTGTGATGAAC+GGG | 0.437153 | 7_3:-75651541 | None:intergenic |
| TCAAGAGGGACTGAAAGAAC+TGG | 0.437969 | 7_3:+75655755 | Msa1124500:CDS |
| TCTGCCAAAGGATCAGAGTA+TGG | 0.439730 | 7_3:-75651638 | None:intergenic |
| CGAAAAGCTGAGCTGGAAAC+CGG | 0.444466 | 7_3:-75651132 | None:intergenic |
| GTTTCTTCCAGAGGAACATC+GGG | 0.451798 | 7_3:-75653193 | None:intergenic |
| TGTAGTCCCCGATGTTCCTC+TGG | 0.462892 | 7_3:+75653186 | Msa1124500:CDS |
| GTTGCGGTCTTCATAAATGA+TGG | 0.466360 | 7_3:+75655872 | Msa1124500:three_prime_UTR |
| CCTCTTTGATTTCCTGCAGA+AGG | 0.468721 | 7_3:-75655097 | None:intergenic |
| AATTATTTCTATGTTGAATG+AGG | 0.472247 | 7_3:+75651794 | Msa1124500:CDS |
| CTTGCCTGCTTCACATGCTC+AGG | 0.475296 | 7_3:-75655542 | None:intergenic |
| TCTGCTGTGGTTGAAAGGTC+AGG | 0.479156 | 7_3:-75651563 | None:intergenic |
| TACTCTGATCCTTTGGCAGA+TGG | 0.479742 | 7_3:+75651641 | Msa1124500:CDS |
| TAAGAAGCATGGAATTGAAC+TGG | 0.481462 | 7_3:+75653237 | Msa1124500:CDS |
| GGAGCCCGAGCGTCAGTTAG+TGG | 0.488287 | 7_3:+75655062 | Msa1124500:CDS |
| GTGCTTCTGCTGTGGTTGAA+AGG | 0.491238 | 7_3:-75651568 | None:intergenic |
| GGAGCTGATGGCGTGATTGT+TGG | 0.492253 | 7_3:+75655693 | Msa1124500:CDS |
| AACACCTGAGCATGTGAAGC+AGG | 0.493055 | 7_3:+75655538 | Msa1124500:CDS |
| AGTGCTATGGTGAGGTTGCT+TGG | 0.493309 | 7_3:+75655717 | Msa1124500:CDS |
| GGTTGAAAGGTCAGGATCAC+CGG | 0.494205 | 7_3:-75651555 | None:intergenic |
| CTACAAGTGTGAAGCGGTAG+TGG | 0.495718 | 7_3:-75650759 | None:intergenic |
| ATCCGGTCTGTCGGAGTGGT+GGG | 0.496096 | 7_3:-75653889 | None:intergenic |
| TTTGTTACAGATAGTGGGAT+GGG | 0.498563 | 7_3:+75655671 | Msa1124500:intron |
| CTCTTTGATTTCCTGCAGAA+GGG | 0.499158 | 7_3:-75655096 | None:intergenic |
| CTCTATAATATCAGATCCAC+AGG | 0.502700 | 7_3:-75651606 | None:intergenic |
| TAATAAGTAAACAGTGCAAT+CGG | 0.503148 | 7_3:-75652710 | None:intergenic |
| CAATTCAACAAACCCGATAC+CGG | 0.504516 | 7_3:+75651113 | Msa1124500:CDS |
| AATAATTTGTTACAGATAGT+GGG | 0.505797 | 7_3:+75655666 | Msa1124500:intron |
| TGGCGGCCGACGATGAAGTC+CGG | 0.507856 | 7_3:-75650846 | None:intergenic |
| CATCCGGTCTGTCGGAGTGG+TGG | 0.508928 | 7_3:-75653890 | None:intergenic |
| CTGAGCTGGAAACCGGTATC+GGG | 0.509438 | 7_3:-75651125 | None:intergenic |
| AACTTTCAGTGCTTCTGCTG+TGG | 0.513354 | 7_3:-75651576 | None:intergenic |
| CTCTTTACAGAGATTATGAA+AGG | 0.513813 | 7_3:-75651164 | None:intergenic |
| GCTACACGAGCTTTAGCAAA+GGG | 0.513942 | 7_3:+75651756 | Msa1124500:CDS |
| TTTACCACTAACTGACGCTC+GGG | 0.514731 | 7_3:-75655066 | None:intergenic |
| TTGATCCCGTTCATCACAGC+CGG | 0.519370 | 7_3:+75651536 | Msa1124500:CDS |
| CTTTACCACTAACTGACGCT+CGG | 0.520939 | 7_3:-75655067 | None:intergenic |
| AGTTCTTTCAGTCCCTCTTG+AGG | 0.520961 | 7_3:-75655753 | None:intergenic |
| GCTGAGCTGGAAACCGGTAT+CGG | 0.522109 | 7_3:-75651126 | None:intergenic |
| CATCAACAATGGCTTTCATC+CGG | 0.525353 | 7_3:-75653906 | None:intergenic |
| GAGTGACGTTGTGATGTTTG+TGG | 0.525477 | 7_3:-75650866 | None:intergenic |
| TTGTCGACGAAAAGCTGAGC+TGG | 0.525976 | 7_3:-75651139 | None:intergenic |
| TAAAGTTCAGGCCCTTCTGC+AGG | 0.530735 | 7_3:+75655085 | Msa1124500:CDS |
| TTGTCGATCCATTGTAGTTG+CGG | 0.531617 | 7_3:+75655856 | Msa1124500:three_prime_UTR |
| GCAATCGGAGTAGATATTTG+TGG | 0.533333 | 7_3:-75652695 | None:intergenic |
| AACTCGCCGGTAAACACCGC+CGG | 0.537002 | 7_3:+75650827 | Msa1124500:five_prime_UTR |
| GCCATTGTTGATGCCGCAGA+AGG | 0.541948 | 7_3:+75653916 | Msa1124500:CDS |
| ATCCCAAAACCAACTGCCAC+AGG | 0.547520 | 7_3:-75655512 | None:intergenic |
| CTGAAAGTTCTTGATTCCTG+TGG | 0.550174 | 7_3:+75651590 | Msa1124500:CDS |
| AAACATCACAACGTCACTCC+AGG | 0.554443 | 7_3:+75650870 | Msa1124500:five_prime_UTR |
| GGATCACCGGCTGTGATGAA+CGG | 0.554610 | 7_3:-75651542 | None:intergenic |
| AACGCCAGTGTCTCTTACGA+TGG | 0.554948 | 7_3:-75652771 | None:intergenic |
| TGTTTCTTCCAGAGGAACAT+CGG | 0.558122 | 7_3:-75653194 | None:intergenic |
| TCCTTCTGCGGCATCAACAA+TGG | 0.559687 | 7_3:-75653917 | None:intergenic |
| ATCAAGACTATGGAAACCGT+TGG | 0.563517 | 7_3:+75651206 | Msa1124500:CDS |
| TATGAAGACCGCAACTACAA+TGG | 0.567148 | 7_3:-75655864 | None:intergenic |
| ACGCACAACTCAGCATAGAA+AGG | 0.569376 | 7_3:-75656017 | None:intergenic |
| GGATCTGATATTATAGAGCT+TGG | 0.569641 | 7_3:+75651611 | Msa1124500:CDS |
| ATAGTGGGATGGGGAGCTGA+TGG | 0.571819 | 7_3:+75655681 | Msa1124500:CDS |
| CGTGATTGTTGGCAGTGCTA+TGG | 0.573205 | 7_3:+75655704 | Msa1124500:CDS |
| CTCCCACCACTCCGACAGAC+CGG | 0.574159 | 7_3:+75653887 | Msa1124500:CDS |
| CTAACATTAAACATCGATCT+CGG | 0.575001 | 7_3:-75655986 | None:intergenic |
| AGGGAAGAAGCTAAGAAGCA+TGG | 0.576598 | 7_3:+75653226 | Msa1124500:CDS |
| ACGACTAAGCCTGTGGCAGT+TGG | 0.583640 | 7_3:+75655503 | Msa1124500:CDS |
| ATTATAGGTGAGCTCTGTTG+GGG | 0.587016 | 7_3:+75655034 | Msa1124500:intron |
| ATTTGTTACAGATAGTGGGA+TGG | 0.589622 | 7_3:+75655670 | Msa1124500:intron |
| TTCAACAGGCTCAAGAAACA+AGG | 0.593923 | 7_3:+75651242 | Msa1124500:CDS |
| ATGGCTTTCATCCGGTCTGT+CGG | 0.598944 | 7_3:-75653898 | None:intergenic |
| TTGTTACAGATAGTGGGATG+GGG | 0.604817 | 7_3:+75655672 | Msa1124500:intron |
| ATGTCCATCGTAAGAGACAC+TGG | 0.610570 | 7_3:+75652767 | Msa1124500:CDS |
| TTTCATCCGGTCTGTCGGAG+TGG | 0.612462 | 7_3:-75653893 | None:intergenic |
| TGCTACACGAGCTTTAGCAA+AGG | 0.612679 | 7_3:+75651755 | Msa1124500:CDS |
| ACAAGATGACTTGAATGCAA+TGG | 0.613604 | 7_3:-75651084 | None:intergenic |
| CCTTCTGCAGGAAATCAAAG+AGG | 0.615272 | 7_3:+75655097 | Msa1124500:CDS |
| CGCAACTGAACTCAACTCGC+CGG | 0.616928 | 7_3:+75650814 | Msa1124500:five_prime_UTR |
| ATAGTCTTGATAGCAGCCAC+AGG | 0.624589 | 7_3:-75651194 | None:intergenic |
| GAATGTTTCAGAGATTCCAA+CGG | 0.627553 | 7_3:-75651222 | None:intergenic |
| TCGGAGTGGTGGGAGTCGTG+AGG | 0.629209 | 7_3:-75653879 | None:intergenic |
| ACACCGCCGGACTTCATCGT+CGG | 0.629716 | 7_3:+75650840 | Msa1124500:five_prime_UTR |
| TGAAGCCAAATCTCCTCAAG+AGG | 0.632617 | 7_3:+75655740 | Msa1124500:CDS |
| TACAACCCAATATTGAAGCG+TGG | 0.649664 | 7_3:+75652731 | Msa1124500:CDS |
| GAAGCCAAATCTCCTCAAGA+GGG | 0.655991 | 7_3:+75655741 | Msa1124500:CDS |
| CTCACACTACAAGTGTGAAG+CGG | 0.657044 | 7_3:-75650765 | None:intergenic |
| AAGATACACAAATCCTTCTG+CGG | 0.666971 | 7_3:-75653929 | None:intergenic |
| TTGTTGGCAGTGCTATGGTG+AGG | 0.674126 | 7_3:+75655709 | Msa1124500:CDS |
| ATAACAGGACCATCTGCCAA+AGG | 0.676714 | 7_3:-75651650 | None:intergenic |
| TGACGTTGTGATGTTTGTGG+CGG | 0.676914 | 7_3:-75650863 | None:intergenic |
| CGGCCGACGATGAAGTCCGG+CGG | 0.677968 | 7_3:-75650843 | None:intergenic |
| GAAGGCAACGACTAAGCCTG+TGG | 0.692102 | 7_3:+75655496 | Msa1124500:intron |
| TGTAAAGAGATACACTCCTG+TGG | 0.698570 | 7_3:+75651178 | Msa1124500:CDS |
| CTACACGAGCTTTAGCAAAG+GGG | 0.709922 | 7_3:+75651757 | Msa1124500:CDS |
| TTTCTTCCAGAGGAACATCG+GGG | 0.741252 | 7_3:-75653192 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTAACAATAATAATATT+TGG | + | chr7_3:75651028-75651047 | Msa1124500:intron | 10.0% |
| !! | ATGTAACAATAATAATATTT+GGG | + | chr7_3:75651029-75651048 | Msa1124500:intron | 10.0% |
| !!! | ATTAACAAATTTTGATATTT+GGG | - | chr7_3:75652170-75652189 | None:intergenic | 10.0% |
| !!! | AATTAACAAATTTTGATATT+TGG | - | chr7_3:75652171-75652190 | None:intergenic | 10.0% |
| !! | AATTATATAGATAAAAAAGA+CGG | - | chr7_3:75653992-75654011 | None:intergenic | 10.0% |
| !! | TATAATTTAAATCAACAAAT+GGG | - | chr7_3:75655020-75655039 | None:intergenic | 10.0% |
| !! | AGAAATAATTGAATCAAAAT+TGG | - | chr7_3:75651784-75651803 | None:intergenic | 15.0% |
| !! | ATAGTTTATAACTTAGAAAA+TGG | - | chr7_3:75651841-75651860 | None:intergenic | 15.0% |
| !!! | TTTTTGTAATACAAGATAAT+AGG | + | chr7_3:75652368-75652387 | Msa1124500:intron | 15.0% |
| !!! | TATACTAAAAATCAGATTTT+TGG | + | chr7_3:75652966-75652985 | Msa1124500:intron | 15.0% |
| !!! | ATACTAAAAATCAGATTTTT+GGG | + | chr7_3:75652967-75652986 | Msa1124500:intron | 15.0% |
| !! | CTATAATTTAAATCAACAAA+TGG | - | chr7_3:75655021-75655040 | None:intergenic | 15.0% |
| !!! | CATTTGTTGATTTAAATTAT+AGG | + | chr7_3:75655019-75655038 | Msa1124500:intron | 15.0% |
| !!! | TTCATTCTAAAAATGAATTT+GGG | + | chr7_3:75655130-75655149 | Msa1124500:intron | 15.0% |
| !!! | TTGTTTTGTTTTATAAATGA+AGG | + | chr7_3:75655478-75655497 | Msa1124500:intron | 15.0% |
| !!! | ACTAATTTTTGAATCAAATG+TGG | - | chr7_3:75650913-75650932 | None:intergenic | 20.0% |
| !! | TTCTTTGCAATAAATTAAGT+TGG | - | chr7_3:75651430-75651449 | None:intergenic | 20.0% |
| !! | ATTGCAAAGAAATAATGAAT+CGG | + | chr7_3:75651439-75651458 | Msa1124500:intron | 20.0% |
| !!! | AATTATTTCTATGTTGAATG+AGG | + | chr7_3:75651794-75651813 | Msa1124500:CDS | 20.0% |
| !! | AAACTTTATAAGCAATACAT+AGG | - | chr7_3:75651987-75652006 | None:intergenic | 20.0% |
| !! | TATGTATTGCTTATAAAGTT+TGG | + | chr7_3:75651986-75652005 | Msa1124500:intron | 20.0% |
| !! | ATGTATTGCTTATAAAGTTT+GGG | + | chr7_3:75651987-75652006 | Msa1124500:intron | 20.0% |
| !! | CAAATACTAAAGAATATAAG+AGG | - | chr7_3:75652135-75652154 | None:intergenic | 20.0% |
| !! | TATGATAATTATAAGAGTGA+GGG | - | chr7_3:75652268-75652287 | None:intergenic | 20.0% |
| !!! | TTTAAAATTCTTATGCTATG+TGG | + | chr7_3:75652943-75652962 | Msa1124500:intron | 20.0% |
| !! | TAAAAGAAAATTTCAAAGGT+AGG | - | chr7_3:75653269-75653288 | None:intergenic | 20.0% |
| !! | CAAGTAAAAGAAAATTTCAA+AGG | - | chr7_3:75653273-75653292 | None:intergenic | 20.0% |
| !!! | CTTTGAAATTTTCTTTTACT+TGG | + | chr7_3:75653271-75653290 | Msa1124500:intron | 20.0% |
| !!! | TTCATTTTATTTGTTTGTGT+TGG | + | chr7_3:75653358-75653377 | Msa1124500:intron | 20.0% |
| !!! | AACTCTCATGTTTTTATATT+TGG | - | chr7_3:75653586-75653605 | None:intergenic | 20.0% |
| !! | AACATATAACAAAACTTCAT+TGG | - | chr7_3:75653674-75653693 | None:intergenic | 20.0% |
| !! | AGAATACAATTATGTTTCAT+TGG | - | chr7_3:75653728-75653747 | None:intergenic | 20.0% |
| !! | GCAATATTGTATAAATTTGA+CGG | + | chr7_3:75653765-75653784 | Msa1124500:intron | 20.0% |
| !!! | TACTTTTTCTTAAACAATGA+AGG | + | chr7_3:75654603-75654622 | Msa1124500:intron | 20.0% |
| !! | TTAATAATGTTGTTCAACTT+CGG | + | chr7_3:75654773-75654792 | Msa1124500:intron | 20.0% |
| !!! | GTTCATTCTAAAAATGAATT+TGG | + | chr7_3:75655129-75655148 | Msa1124500:intron | 20.0% |
| !!! | ATCAAAAGAGTATTTTAACT+TGG | - | chr7_3:75655262-75655281 | None:intergenic | 20.0% |
| !! | ATCTGTAACAAATTATTTGA+TGG | - | chr7_3:75655663-75655682 | None:intergenic | 20.0% |
| !!! | AAATAATTTGTTACAGATAG+TGG | + | chr7_3:75655665-75655684 | Msa1124500:intron | 20.0% |
| !!! | AATAATTTGTTACAGATAGT+GGG | + | chr7_3:75655666-75655685 | Msa1124500:intron | 20.0% |
| !! | AAAAACAATAGCTTTTGCAT+TGG | - | chr7_3:75650950-75650969 | None:intergenic | 25.0% |
| ! | ATTTGAATCAGAACAGAAAA+TGG | - | chr7_3:75651288-75651307 | None:intergenic | 25.0% |
| ! | AAGAAATAATGAATCGGAAT+CGG | + | chr7_3:75651445-75651464 | Msa1124500:intron | 25.0% |
| ! | ATAACTTAGAAAATGGCAAA+TGG | - | chr7_3:75651834-75651853 | None:intergenic | 25.0% |
| !! | ATAAACTATAGCTACTTTGT+TGG | + | chr7_3:75651852-75651871 | Msa1124500:intron | 25.0% |
| ! | CTAATTAAACCTTACAAAAC+CGG | - | chr7_3:75652031-75652050 | None:intergenic | 25.0% |
| ! | ATCCTAGTATCTTAGAATTT+GGG | - | chr7_3:75652060-75652079 | None:intergenic | 25.0% |
| ! | GATTTGTGAATGAAAATCAA+TGG | - | chr7_3:75652098-75652117 | None:intergenic | 25.0% |
| ! | CTATGATAATTATAAGAGTG+AGG | - | chr7_3:75652269-75652288 | None:intergenic | 25.0% |
| ! | CTCACTCTTATAATTATCAT+AGG | + | chr7_3:75652267-75652286 | Msa1124500:intron | 25.0% |
| ! | ATGCTTATTGTTCATAAGTA+GGG | + | chr7_3:75652408-75652427 | Msa1124500:intron | 25.0% |
| ! | TTAAAACCATTGTTCTAACT+AGG | + | chr7_3:75652599-75652618 | Msa1124500:intron | 25.0% |
| ! | AAACATTCTCTTATGAATCA+TGG | + | chr7_3:75652632-75652651 | Msa1124500:intron | 25.0% |
| !!! | TCATTTTTCAATGGTTGATA+TGG | + | chr7_3:75652663-75652682 | Msa1124500:intron | 25.0% |
| ! | TAATAAGTAAACAGTGCAAT+CGG | - | chr7_3:75652713-75652732 | None:intergenic | 25.0% |
| ! | AACAATGTCATAAAATGTGT+CGG | + | chr7_3:75652904-75652923 | Msa1124500:intron | 25.0% |
| ! | AATCAATTTCTAAGTAGACT+TGG | - | chr7_3:75653074-75653093 | None:intergenic | 25.0% |
| !!! | TTTTTTAACCATATGTATGC+AGG | + | chr7_3:75653160-75653179 | Msa1124500:intron | 25.0% |
| !! | TTTTTAACCATATGTATGCA+GGG | + | chr7_3:75653161-75653180 | Msa1124500:intron | 25.0% |
| ! | TGGAAGAAACAAAAACTTTA+AGG | + | chr7_3:75653206-75653225 | Msa1124500:CDS | 25.0% |
| ! | GGAAGAAACAAAAACTTTAA+GGG | + | chr7_3:75653207-75653226 | Msa1124500:CDS | 25.0% |
| ! | TCATTATGATCAACAGTATA+AGG | - | chr7_3:75653319-75653338 | None:intergenic | 25.0% |
| ! | ATGGCTATAGTTAGTTAATT+TGG | + | chr7_3:75653824-75653843 | Msa1124500:intron | 25.0% |
| !!! | ATTAAACACACTCTAAGATA+TGG | + | chr7_3:75654221-75654240 | Msa1124500:intron | 25.0% |
| !!! | TAGTATTTTTGCTTTGATGA+TGG | - | chr7_3:75654383-75654402 | None:intergenic | 25.0% |
| ! | CATCAAAGCAAAAATACTAA+TGG | + | chr7_3:75654384-75654403 | Msa1124500:intron | 25.0% |
| !! | TGAATTAATACATTTTCCTC+TGG | + | chr7_3:75654483-75654502 | Msa1124500:intron | 25.0% |
| ! | TGAGATATTCATATCTTGAT+TGG | - | chr7_3:75654562-75654581 | None:intergenic | 25.0% |
| ! | GAAGTTGAACAACATTATTA+AGG | - | chr7_3:75654774-75654793 | None:intergenic | 25.0% |
| !!! | AGTATTTTAACTTGGCAAAT+TGG | - | chr7_3:75655254-75655273 | None:intergenic | 25.0% |
| ! | TCTTGAAACAATAAAGAATG+AGG | - | chr7_3:75655371-75655390 | None:intergenic | 25.0% |
| !! | AGAAGCATACTAAAGTAATA+TGG | - | chr7_3:75655576-75655595 | None:intergenic | 25.0% |
| !! | AGAAGCATACTAAAGTAATA+TGG | - | chr7_3:75655576-75655595 | None:intergenic | 25.0% |
| ! | AGTATGCTTCTACTTAAATT+TGG | + | chr7_3:75655619-75655638 | Msa1124500:intron | 25.0% |
| ! | CACTTGATTGAAATTATGTA+TGG | + | chr7_3:75655805-75655824 | Msa1124500:exon | 25.0% |
| !!! | CATAAATGATGGATTGAATA+AGG | + | chr7_3:75655883-75655902 | Msa1124500:three_prime_UTR | 25.0% |
| ! | ACTGAAAATGTACAAAAACT+TGG | - | chr7_3:75655945-75655964 | None:intergenic | 25.0% |
| !! | TGTACATTTTCAGTTATGAA+AGG | + | chr7_3:75655951-75655970 | Msa1124500:three_prime_UTR | 25.0% |
| !! | GTAGTATTGGGAAGTTTTTA+TGG | + | chr7_3:75651061-75651080 | Msa1124500:intron | 30.0% |
| CTCTTTACAGAGATTATGAA+AGG | - | chr7_3:75651167-75651186 | None:intergenic | 30.0% | |
| !! | TTTGTGTATGTTTAGTTCTG+TGG | + | chr7_3:75651319-75651338 | Msa1124500:intron | 30.0% |
| !! | TGCAATAAATTAAGTTGGCA+TGG | - | chr7_3:75651425-75651444 | None:intergenic | 30.0% |
| AAGAAAATGTGTTTGTGTGA+AGG | + | chr7_3:75651508-75651527 | Msa1124500:intron | 30.0% | |
| AAGAATGAAACCTGAATAAC+AGG | - | chr7_3:75651668-75651687 | None:intergenic | 30.0% | |
| TTTCATACCTAACACAATGA+AGG | - | chr7_3:75651929-75651948 | None:intergenic | 30.0% | |
| TTCATTGTGTTAGGTATGAA+AGG | + | chr7_3:75651928-75651947 | Msa1124500:intron | 30.0% | |
| TCATTGTGTTAGGTATGAAA+GGG | + | chr7_3:75651929-75651948 | Msa1124500:intron | 30.0% | |
| !! | CGGTTTTGTAAGGTTTAATT+AGG | + | chr7_3:75652029-75652048 | Msa1124500:intron | 30.0% |
| ! | AGTATCTTAGAATTTGGGTT+GGG | - | chr7_3:75652055-75652074 | None:intergenic | 30.0% |
| TAGTATCTTAGAATTTGGGT+TGG | - | chr7_3:75652056-75652075 | None:intergenic | 30.0% | |
| !! | AACCCAAATTCTAAGATACT+AGG | + | chr7_3:75652055-75652074 | Msa1124500:intron | 30.0% |
| CATCCTAGTATCTTAGAATT+TGG | - | chr7_3:75652061-75652080 | None:intergenic | 30.0% | |
| !! | AATTCTAAGATACTAGGATG+AGG | + | chr7_3:75652061-75652080 | Msa1124500:intron | 30.0% |
| CATCATTGCTTGCAATAATA+GGG | - | chr7_3:75652311-75652330 | None:intergenic | 30.0% | |
| GATGCTTATTGTTCATAAGT+AGG | + | chr7_3:75652407-75652426 | Msa1124500:intron | 30.0% | |
| CAAAAAAGATATCTTGCCAA+AGG | - | chr7_3:75652562-75652581 | None:intergenic | 30.0% | |
| !! | GACTGGTTATCATTTTTCAA+TGG | + | chr7_3:75652654-75652673 | Msa1124500:intron | 30.0% |
| TTAGAAAATAGACCAAACGA+AGG | - | chr7_3:75652869-75652888 | None:intergenic | 30.0% | |
| !! | TTTCCCTTTTTCTTCTAGTT+TGG | + | chr7_3:75653118-75653137 | Msa1124500:intron | 30.0% |
| CTACCAAACTAGAAGAAAAA+GGG | - | chr7_3:75653124-75653143 | None:intergenic | 30.0% | |
| ACTACCAAACTAGAAGAAAA+AGG | - | chr7_3:75653125-75653144 | None:intergenic | 30.0% | |
| !!! | TTTTCTTCTAGTTTGGTAGT+CGG | + | chr7_3:75653125-75653144 | Msa1124500:intron | 30.0% |
| !! | AAAGTTTTTGTTTCTTCCAG+AGG | - | chr7_3:75653205-75653224 | None:intergenic | 30.0% |
| !! | CTTGGTTTTTGTATTTCATG+TGG | + | chr7_3:75653289-75653308 | Msa1124500:intron | 30.0% |
| ! | AAGCTTTATAAACACTACAC+AGG | - | chr7_3:75653518-75653537 | None:intergenic | 30.0% |
| TGTGTAGTGTTTATAAAGCT+TGG | + | chr7_3:75653517-75653536 | Msa1124500:intron | 30.0% | |
| CTAACTCATCCTTAAAAAAC+TGG | - | chr7_3:75653562-75653581 | None:intergenic | 30.0% | |
| !!! | CAGTTTTTTAAGGATGAGTT+AGG | + | chr7_3:75653560-75653579 | Msa1124500:intron | 30.0% |
| ! | CATTTTCTAATATGTGCACA+TGG | + | chr7_3:75653805-75653824 | Msa1124500:intron | 30.0% |
| ! | ACATATTTTCTCCTACTACT+AGG | + | chr7_3:75654150-75654169 | Msa1124500:intron | 30.0% |
| TATGGTTGTCTCATTTCTAT+TGG | + | chr7_3:75654239-75654258 | Msa1124500:intron | 30.0% | |
| ! | TAGCATTTTTGCTTTGATGA+TGG | - | chr7_3:75654267-75654286 | None:intergenic | 30.0% |
| CATCAAAGCAAAAATGCTAA+TGG | + | chr7_3:75654268-75654287 | Msa1124500:intron | 30.0% | |
| ! | CATAACAAGTCTAGAATTCT+TGG | - | chr7_3:75654339-75654358 | None:intergenic | 30.0% |
| !! | CAAGAATTCTAGACTTGTTA+TGG | + | chr7_3:75654337-75654356 | Msa1124500:intron | 30.0% |
| TATGGTTGTCTCATTTCTAT+TGG | + | chr7_3:75654239-75654258 | Msa1124500:intron | 30.0% | |
| TCTTGAACATTTGTACACTA+AGG | + | chr7_3:75654441-75654460 | Msa1124500:intron | 30.0% | |
| GATATTCATATCTTGATTGG+AGG | - | chr7_3:75654559-75654578 | None:intergenic | 30.0% | |
| GAATAGGACAAAATTTGATG+TGG | + | chr7_3:75654653-75654672 | Msa1124500:intron | 30.0% | |
| TTTGTGAAATGGTCATACTT+TGG | + | chr7_3:75654714-75654733 | Msa1124500:intron | 30.0% | |
| !! | TGGTGTCATCTAAATAGTTT+AGG | + | chr7_3:75654734-75654753 | Msa1124500:intron | 30.0% |
| GTCATTAGATGAAGCTTAAA+TGG | + | chr7_3:75655201-75655220 | Msa1124500:intron | 30.0% | |
| ! | CTCTTTTGATCTTAATCCAA+CGG | + | chr7_3:75655272-75655291 | Msa1124500:intron | 30.0% |
| !! | AATGAGGTGTTGAAAAAGAA+GGG | - | chr7_3:75655355-75655374 | None:intergenic | 30.0% |
| CAGTAGTATAGCATATAACT+TGG | + | chr7_3:75655419-75655438 | Msa1124500:intron | 30.0% | |
| !!! | TCAATCAAGTGCTGATTTTA+AGG | - | chr7_3:75655796-75655815 | None:intergenic | 30.0% |
| CTAACATTAAACATCGATCT+CGG | - | chr7_3:75655989-75656008 | None:intergenic | 30.0% | |
| GAATCAAATGTGGAGAGAAA+AGG | - | chr7_3:75650903-75650922 | None:intergenic | 35.0% | |
| !! | TGGGTGTTTTTCAGTAGTAT+TGG | + | chr7_3:75651048-75651067 | Msa1124500:intron | 35.0% |
| !! | GGGTGTTTTTCAGTAGTATT+GGG | + | chr7_3:75651049-75651068 | Msa1124500:intron | 35.0% |
| ACAAGATGACTTGAATGCAA+TGG | - | chr7_3:75651087-75651106 | None:intergenic | 35.0% | |
| GAATGTTTCAGAGATTCCAA+CGG | - | chr7_3:75651225-75651244 | None:intergenic | 35.0% | |
| !! | GAATCTCTGAAACATTCAAC+AGG | + | chr7_3:75651228-75651247 | Msa1124500:CDS | 35.0% |
| AAAATGTGTTTGTGTGAAGG+TGG | + | chr7_3:75651511-75651530 | Msa1124500:intron | 35.0% | |
| CTCTATAATATCAGATCCAC+AGG | - | chr7_3:75651609-75651628 | None:intergenic | 35.0% | |
| GGATCTGATATTATAGAGCT+TGG | + | chr7_3:75651611-75651630 | Msa1124500:CDS | 35.0% | |
| ! | ACTGACATGTTTTTCTGTTC+AGG | + | chr7_3:75651728-75651747 | Msa1124500:intron | 35.0% |
| CTCTTCAACTTCAAGAACAA+GGG | - | chr7_3:75652227-75652246 | None:intergenic | 35.0% | |
| GCATCATTGCTTGCAATAAT+AGG | - | chr7_3:75652312-75652331 | None:intergenic | 35.0% | |
| ATCTTGCCAAAGGTTCAAAA+TGG | - | chr7_3:75652552-75652571 | None:intergenic | 35.0% | |
| AAACCATTGTTCTAACTAGG+AGG | + | chr7_3:75652602-75652621 | Msa1124500:intron | 35.0% | |
| TTCTCTTATGAATCATGGAC+TGG | + | chr7_3:75652637-75652656 | Msa1124500:intron | 35.0% | |
| !! | TTTTCAATGGTTGATATGGC+AGG | + | chr7_3:75652667-75652686 | Msa1124500:intron | 35.0% |
| !! | TTTCTTCTAGTTTGGTAGTC+GGG | + | chr7_3:75653126-75653145 | Msa1124500:intron | 35.0% |
| ! | TAAGAAGCATGGAATTGAAC+TGG | + | chr7_3:75653237-75653256 | Msa1124500:CDS | 35.0% |
| ATCAACACCTTCATTGTGTT+GGG | + | chr7_3:75653450-75653469 | Msa1124500:intron | 35.0% | |
| GCTATATCTCTAAGCAATGT+GGG | - | chr7_3:75653496-75653515 | None:intergenic | 35.0% | |
| CCTTAAAAAACTGGCATGTA+AGG | - | chr7_3:75653553-75653572 | None:intergenic | 35.0% | |
| !!! | CCTTACATGCCAGTTTTTTA+AGG | + | chr7_3:75653550-75653569 | Msa1124500:intron | 35.0% |
| AATCCAGAAGTTATGCATGA+TGG | + | chr7_3:75653640-75653659 | Msa1124500:intron | 35.0% | |
| AATCCAGAAGTTATGCATGA+TGG | + | chr7_3:75653640-75653659 | Msa1124500:intron | 35.0% | |
| TTGCTTCTTTGATGTCATCA+AGG | + | chr7_3:75653852-75653871 | Msa1124500:intron | 35.0% | |
| AAGATACACAAATCCTTCTG+CGG | - | chr7_3:75653932-75653951 | None:intergenic | 35.0% | |
| GAAAATATGTTTCCTTGAGC+AGG | - | chr7_3:75654140-75654159 | None:intergenic | 35.0% | |
| ATAGAAATCGATATTGCCAG+AGG | - | chr7_3:75654502-75654521 | None:intergenic | 35.0% | |
| TGCTTTCTGTAGCATTTACT+AGG | + | chr7_3:75654627-75654646 | Msa1124500:intron | 35.0% | |
| !!! | TTTTAGCTCACTTGTCCAAT+AGG | + | chr7_3:75654878-75654897 | Msa1124500:intron | 35.0% |
| ! | TTTAGCTCACTTGTCCAATA+GGG | + | chr7_3:75654879-75654898 | Msa1124500:intron | 35.0% |
| AAATTATAGGTGAGCTCTGT+TGG | + | chr7_3:75655032-75655051 | Msa1124500:intron | 35.0% | |
| AATTATAGGTGAGCTCTGTT+GGG | + | chr7_3:75655033-75655052 | Msa1124500:intron | 35.0% | |
| ATCTTATGACAGTAGATTGC+AGG | + | chr7_3:75655301-75655320 | Msa1124500:intron | 35.0% | |
| TCTTATGACAGTAGATTGCA+GGG | + | chr7_3:75655302-75655321 | Msa1124500:intron | 35.0% | |
| AAGGGGAAACAAATTTGAAC+TGG | - | chr7_3:75655337-75655356 | None:intergenic | 35.0% | |
| !! | ATGAGGTGTTGAAAAAGAAG+GGG | - | chr7_3:75655354-75655373 | None:intergenic | 35.0% |
| !! | GAATGAGGTGTTGAAAAAGA+AGG | - | chr7_3:75655356-75655375 | None:intergenic | 35.0% |
| !! | ATTTGTTACAGATAGTGGGA+TGG | + | chr7_3:75655670-75655689 | Msa1124500:intron | 35.0% |
| !! | TTTGTTACAGATAGTGGGAT+GGG | + | chr7_3:75655671-75655690 | Msa1124500:intron | 35.0% |
| GATCGACAACAAAAAACTAC+TGG | - | chr7_3:75655845-75655864 | None:intergenic | 35.0% | |
| GAGAGAAAAGGAAAACAACC+TGG | - | chr7_3:75650891-75650910 | None:intergenic | 40.0% | |
| CAATTCAACAAACCCGATAC+CGG | + | chr7_3:75651113-75651132 | Msa1124500:CDS | 40.0% | |
| TGTAAAGAGATACACTCCTG+TGG | + | chr7_3:75651178-75651197 | Msa1124500:CDS | 40.0% | |
| ATCAAGACTATGGAAACCGT+TGG | + | chr7_3:75651206-75651225 | Msa1124500:CDS | 40.0% | |
| TTCAACAGGCTCAAGAAACA+AGG | + | chr7_3:75651242-75651261 | Msa1124500:CDS | 40.0% | |
| CTGAAAGTTCTTGATTCCTG+TGG | + | chr7_3:75651590-75651609 | Msa1124500:CDS | 40.0% | |
| TTGGAAATTCCGCCTAATTG+TGG | + | chr7_3:75651871-75651890 | Msa1124500:intron | 40.0% | |
| !! | TAACACAATGAAGGTGTTGG+AGG | - | chr7_3:75651920-75651939 | None:intergenic | 40.0% |
| TCCAACACCTTCATTGTGTT+AGG | + | chr7_3:75651919-75651938 | Msa1124500:intron | 40.0% | |
| ! | ACCTAACACAATGAAGGTGT+TGG | - | chr7_3:75651923-75651942 | None:intergenic | 40.0% |
| TTGTGTTAGGTATGAAAGGG+TGG | + | chr7_3:75651932-75651951 | Msa1124500:intron | 40.0% | |
| TGTGTTAGGTATGAAAGGGT+GGG | + | chr7_3:75651933-75651952 | Msa1124500:intron | 40.0% | |
| TCCCACATTTGCTTGAGATA+TGG | + | chr7_3:75651961-75651980 | Msa1124500:intron | 40.0% | |
| GCCATATCTCAAGCAAATGT+GGG | - | chr7_3:75651965-75651984 | None:intergenic | 40.0% | |
| AACTTCAAGAACAAGGGTAG+AGG | - | chr7_3:75652221-75652240 | None:intergenic | 40.0% | |
| CCTCTTCAACTTCAAGAACA+AGG | - | chr7_3:75652228-75652247 | None:intergenic | 40.0% | |
| CCTTGTTCTTGAAGTTGAAG+AGG | + | chr7_3:75652225-75652244 | Msa1124500:intron | 40.0% | |
| GTTCTTGAAGTTGAAGAGGA+AGG | + | chr7_3:75652229-75652248 | Msa1124500:intron | 40.0% | |
| ! | CAAAATGGTGGAGTACATCA+TGG | - | chr7_3:75652537-75652556 | None:intergenic | 40.0% |
| ! | ACTCCACCATTTTGAACCTT+TGG | + | chr7_3:75652543-75652562 | Msa1124500:intron | 40.0% |
| TTGCCAAAGGTTCAAAATGG+TGG | - | chr7_3:75652549-75652568 | None:intergenic | 40.0% | |
| ACTCCTCCTAGTTAGAACAA+TGG | - | chr7_3:75652608-75652627 | None:intergenic | 40.0% | |
| GCAATCGGAGTAGATATTTG+TGG | - | chr7_3:75652698-75652717 | None:intergenic | 40.0% | |
| TACAACCCAATATTGAAGCG+TGG | + | chr7_3:75652731-75652750 | Msa1124500:CDS | 40.0% | |
| CAGTACCACGCTTCAATATT+GGG | - | chr7_3:75652739-75652758 | None:intergenic | 40.0% | |
| GTGAGACTCAACTGATGTAA+TGG | + | chr7_3:75652798-75652817 | Msa1124500:intron | 40.0% | |
| ACATTGTGCTTACCTTCGTT+TGG | + | chr7_3:75652854-75652873 | Msa1124500:intron | 40.0% | |
| ! | TAAAATGTGTCGGCAAGATC+AGG | + | chr7_3:75652914-75652933 | Msa1124500:intron | 40.0% |
| TGTTTCTTCCAGAGGAACAT+CGG | - | chr7_3:75653197-75653216 | None:intergenic | 40.0% | |
| TGGAAATTCCACCTTCATTG+CGG | + | chr7_3:75653378-75653397 | Msa1124500:intron | 40.0% | |
| !! | CAACACAATGAAGGTGTTGA+TGG | - | chr7_3:75653451-75653470 | None:intergenic | 40.0% |
| CATCAACACCTTCATTGTGT+TGG | + | chr7_3:75653449-75653468 | Msa1124500:intron | 40.0% | |
| TTCATTGTGTTGGGTGTGAA+GGG | + | chr7_3:75653459-75653478 | Msa1124500:intron | 40.0% | |
| GGCTATATCTCTAAGCAATG+TGG | - | chr7_3:75653497-75653516 | None:intergenic | 40.0% | |
| AAAACTGGCATGTAAGGTGA+GGG | - | chr7_3:75653547-75653566 | None:intergenic | 40.0% | |
| AAAAACTGGCATGTAAGGTG+AGG | - | chr7_3:75653548-75653567 | None:intergenic | 40.0% | |
| TCACCATCATGCATAACTTC+TGG | - | chr7_3:75653646-75653665 | None:intergenic | 40.0% | |
| TCACCATCATGCATAACTTC+TGG | - | chr7_3:75653646-75653665 | None:intergenic | 40.0% | |
| CATCAACAATGGCTTTCATC+CGG | - | chr7_3:75653909-75653928 | None:intergenic | 40.0% | |
| ATATGTTTCCTTGAGCAGGA+TGG | - | chr7_3:75654136-75654155 | None:intergenic | 40.0% | |
| GATTTCATCAGCCTAGTAGT+AGG | - | chr7_3:75654164-75654183 | None:intergenic | 40.0% | |
| TTCTGTAGCATTTACTAGGC+TGG | + | chr7_3:75654631-75654650 | Msa1124500:intron | 40.0% | |
| AGCATTTACTAGGCTGGAAT+AGG | + | chr7_3:75654637-75654656 | Msa1124500:intron | 40.0% | |
| ! | TGTCTGTTCATTTTCATGGC+TGG | - | chr7_3:75654682-75654701 | None:intergenic | 40.0% |
| ATTATAGGTGAGCTCTGTTG+GGG | + | chr7_3:75655034-75655053 | Msa1124500:intron | 40.0% | |
| GTCAGTTAGTGGTAAAGTTC+AGG | + | chr7_3:75655073-75655092 | Msa1124500:CDS | 40.0% | |
| ! | CTCTTTGATTTCCTGCAGAA+GGG | - | chr7_3:75655099-75655118 | None:intergenic | 40.0% |
| GTCATAAGATTCAGATCCGT+TGG | - | chr7_3:75655291-75655310 | None:intergenic | 40.0% | |
| CTTATGACAGTAGATTGCAG+GGG | + | chr7_3:75655303-75655322 | Msa1124500:intron | 40.0% | |
| !! | TTGTTACAGATAGTGGGATG+GGG | + | chr7_3:75655672-75655691 | Msa1124500:intron | 40.0% |
| !!! | AAGTGCTGATTTTAAGGAGC+GGG | - | chr7_3:75655790-75655809 | None:intergenic | 40.0% |
| !!! | CAAGTGCTGATTTTAAGGAG+CGG | - | chr7_3:75655791-75655810 | None:intergenic | 40.0% |
| TTGTCGATCCATTGTAGTTG+CGG | + | chr7_3:75655856-75655875 | Msa1124500:three_prime_UTR | 40.0% | |
| TATGAAGACCGCAACTACAA+TGG | - | chr7_3:75655867-75655886 | None:intergenic | 40.0% | |
| GTTGCGGTCTTCATAAATGA+TGG | + | chr7_3:75655872-75655891 | Msa1124500:three_prime_UTR | 40.0% | |
| CTCACACTACAAGTGTGAAG+CGG | - | chr7_3:75650768-75650787 | None:intergenic | 45.0% | |
| TGACGTTGTGATGTTTGTGG+CGG | - | chr7_3:75650866-75650885 | None:intergenic | 45.0% | |
| GAGTGACGTTGTGATGTTTG+TGG | - | chr7_3:75650869-75650888 | None:intergenic | 45.0% | |
| AAACATCACAACGTCACTCC+AGG | + | chr7_3:75650870-75650889 | Msa1124500:five_prime_UTR | 45.0% | |
| ! | ATAGTCTTGATAGCAGCCAC+AGG | - | chr7_3:75651197-75651216 | None:intergenic | 45.0% |
| TGTGGCTGCTATCAAGACTA+TGG | + | chr7_3:75651196-75651215 | Msa1124500:CDS | 45.0% | |
| AACTTTCAGTGCTTCTGCTG+TGG | - | chr7_3:75651579-75651598 | None:intergenic | 45.0% | |
| CGTTCCATACTCTGATCCTT+TGG | + | chr7_3:75651634-75651653 | Msa1124500:CDS | 45.0% | |
| TCTGCCAAAGGATCAGAGTA+TGG | - | chr7_3:75651641-75651660 | None:intergenic | 45.0% | |
| TACTCTGATCCTTTGGCAGA+TGG | + | chr7_3:75651641-75651660 | Msa1124500:CDS | 45.0% | |
| ATAACAGGACCATCTGCCAA+AGG | - | chr7_3:75651653-75651672 | None:intergenic | 45.0% | |
| ! | TGCTACACGAGCTTTAGCAA+AGG | + | chr7_3:75651755-75651774 | Msa1124500:CDS | 45.0% |
| ! | GCTACACGAGCTTTAGCAAA+GGG | + | chr7_3:75651756-75651775 | Msa1124500:CDS | 45.0% |
| ! | CTACACGAGCTTTAGCAAAG+GGG | + | chr7_3:75651757-75651776 | Msa1124500:CDS | 45.0% |
| TTCCGCCTAATTGTGGCATT+TGG | + | chr7_3:75651878-75651897 | Msa1124500:intron | 45.0% | |
| TCCGCCTAATTGTGGCATTT+GGG | + | chr7_3:75651879-75651898 | Msa1124500:intron | 45.0% | |
| ACCCAAATGCCACAATTAGG+CGG | - | chr7_3:75651883-75651902 | None:intergenic | 45.0% | |
| GCAACCCAAATGCCACAATT+AGG | - | chr7_3:75651886-75651905 | None:intergenic | 45.0% | |
| GGCCATATCTCAAGCAAATG+TGG | - | chr7_3:75651966-75651985 | None:intergenic | 45.0% | |
| !! | AAAACCGGCTTGTAAGGTGA+GGG | - | chr7_3:75652016-75652035 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr7_3:75652022-75652041 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr7_3:75652019-75652038 | Msa1124500:intron | 45.0% |
| TCAAGAACAAGGGTAGAGGA+AGG | - | chr7_3:75652217-75652236 | None:intergenic | 45.0% | |
| CCAGTACCACGCTTCAATAT+TGG | - | chr7_3:75652740-75652759 | None:intergenic | 45.0% | |
| CCAATATTGAAGCGTGGTAC+TGG | + | chr7_3:75652737-75652756 | Msa1124500:CDS | 45.0% | |
| ATGTCCATCGTAAGAGACAC+TGG | + | chr7_3:75652767-75652786 | Msa1124500:CDS | 45.0% | |
| CTGCTGTCAATTCTCTGTCA+AGG | + | chr7_3:75653036-75653055 | Msa1124500:intron | 45.0% | |
| CTACAAGCCCTGCATACATA+TGG | - | chr7_3:75653171-75653190 | None:intergenic | 45.0% | |
| TTTCTTCCAGAGGAACATCG+GGG | - | chr7_3:75653195-75653214 | None:intergenic | 45.0% | |
| GTTTCTTCCAGAGGAACATC+GGG | - | chr7_3:75653196-75653215 | None:intergenic | 45.0% | |
| AGGGAAGAAGCTAAGAAGCA+TGG | + | chr7_3:75653226-75653245 | Msa1124500:CDS | 45.0% | |
| AACCAAAGGCCGCAATTAGT+CGG | - | chr7_3:75653415-75653434 | None:intergenic | 45.0% | |
| GCTGCAATGAAGACAACCAA+AGG | - | chr7_3:75653429-75653448 | None:intergenic | 45.0% | |
| CTTCACACCCAACACAATGA+AGG | - | chr7_3:75653460-75653479 | None:intergenic | 45.0% | |
| CTTCATTGTGTTGGGTGTGA+AGG | + | chr7_3:75653458-75653477 | Msa1124500:intron | 45.0% | |
| TCATTGTGTTGGGTGTGAAG+GGG | + | chr7_3:75653460-75653479 | Msa1124500:intron | 45.0% | |
| ATATCTCAGCAAAAGCTGCG+AGG | + | chr7_3:75654574-75654593 | Msa1124500:intron | 45.0% | |
| TGTCAACTTCCTAGCCCTAT+TGG | - | chr7_3:75654896-75654915 | None:intergenic | 45.0% | |
| ACTCTCTCAGATCAATGCAC+CGG | + | chr7_3:75654979-75654998 | Msa1124500:intron | 45.0% | |
| TGGGTAACAACAATTACCGC+CGG | - | chr7_3:75655001-75655020 | None:intergenic | 45.0% | |
| TTTACCACTAACTGACGCTC+GGG | - | chr7_3:75655069-75655088 | None:intergenic | 45.0% | |
| CTTTACCACTAACTGACGCT+CGG | - | chr7_3:75655070-75655089 | None:intergenic | 45.0% | |
| ! | CCTCTTTGATTTCCTGCAGA+AGG | - | chr7_3:75655100-75655119 | None:intergenic | 45.0% |
| CCTTCTGCAGGAAATCAAAG+AGG | + | chr7_3:75655097-75655116 | Msa1124500:CDS | 45.0% | |
| GCAGCAACTGCATCATATTC+TGG | - | chr7_3:75655166-75655185 | None:intergenic | 45.0% | |
| TGAAGCCAAATCTCCTCAAG+AGG | + | chr7_3:75655740-75655759 | Msa1124500:CDS | 45.0% | |
| GAAGCCAAATCTCCTCAAGA+GGG | + | chr7_3:75655741-75655760 | Msa1124500:CDS | 45.0% | |
| AGTTCTTTCAGTCCCTCTTG+AGG | - | chr7_3:75655756-75655775 | None:intergenic | 45.0% | |
| TCAAGAGGGACTGAAAGAAC+TGG | + | chr7_3:75655755-75655774 | Msa1124500:CDS | 45.0% | |
| ACGCACAACTCAGCATAGAA+AGG | - | chr7_3:75656020-75656039 | None:intergenic | 45.0% | |
| !!! | CAATTTTTTTTTTTTTTTTT+TGG | - | chr7_3:75654030-75654049 | None:intergenic | 5.0% |
| !! | CAAAAAAAAAAAAAAAAAAT+TGG | + | chr7_3:75654028-75654047 | Msa1124500:intron | 5.0% |
| !!! | ATATTTACTTTAAATTTTTT+AGG | + | chr7_3:75654824-75654843 | Msa1124500:intron | 5.0% |
| CTACAAGTGTGAAGCGGTAG+TGG | - | chr7_3:75650762-75650781 | None:intergenic | 50.0% | |
| CGAAAAGCTGAGCTGGAAAC+CGG | - | chr7_3:75651135-75651154 | None:intergenic | 50.0% | |
| TTGTCGACGAAAAGCTGAGC+TGG | - | chr7_3:75651142-75651161 | None:intergenic | 50.0% | |
| TTGATCCCGTTCATCACAGC+CGG | + | chr7_3:75651536-75651555 | Msa1124500:CDS | 50.0% | |
| GGTTGAAAGGTCAGGATCAC+CGG | - | chr7_3:75651558-75651577 | None:intergenic | 50.0% | |
| TCTGCTGTGGTTGAAAGGTC+AGG | - | chr7_3:75651566-75651585 | None:intergenic | 50.0% | |
| GTGCTTCTGCTGTGGTTGAA+AGG | - | chr7_3:75651571-75651590 | None:intergenic | 50.0% | |
| GGCAGATGGTCCTGTTATTC+AGG | + | chr7_3:75651655-75651674 | Msa1124500:CDS | 50.0% | |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | - | chr7_3:75651908-75651927 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr7_3:75652017-75652036 | None:intergenic | 50.0% |
| AACGCCAGTGTCTCTTACGA+TGG | - | chr7_3:75652774-75652793 | None:intergenic | 50.0% | |
| GTAAGAGACACTGGCGTTCA+TGG | + | chr7_3:75652776-75652795 | Msa1124500:CDS | 50.0% | |
| ATGGCTTTCATCCGGTCTGT+CGG | - | chr7_3:75653901-75653920 | None:intergenic | 50.0% | |
| TCCTTCTGCGGCATCAACAA+TGG | - | chr7_3:75653920-75653939 | None:intergenic | 50.0% | |
| CTCACTTGTCCAATAGGGCT+AGG | + | chr7_3:75654884-75654903 | Msa1124500:intron | 50.0% | |
| TAAAGTTCAGGCCCTTCTGC+AGG | + | chr7_3:75655085-75655104 | Msa1124500:CDS | 50.0% | |
| !! | AAGCCTGTGGCAGTTGGTTT+TGG | + | chr7_3:75655509-75655528 | Msa1124500:CDS | 50.0% |
| !!! | AGCCTGTGGCAGTTGGTTTT+GGG | + | chr7_3:75655510-75655529 | Msa1124500:CDS | 50.0% |
| ATCCCAAAACCAACTGCCAC+AGG | - | chr7_3:75655515-75655534 | None:intergenic | 50.0% | |
| AACACCTGAGCATGTGAAGC+AGG | + | chr7_3:75655538-75655557 | Msa1124500:CDS | 50.0% | |
| CGTGATTGTTGGCAGTGCTA+TGG | + | chr7_3:75655704-75655723 | Msa1124500:CDS | 50.0% | |
| TTGTTGGCAGTGCTATGGTG+AGG | + | chr7_3:75655709-75655728 | Msa1124500:CDS | 50.0% | |
| AGTGCTATGGTGAGGTTGCT+TGG | + | chr7_3:75655717-75655736 | Msa1124500:CDS | 50.0% | |
| CAGTCCCTCTTGAGGAGATT+TGG | - | chr7_3:75655748-75655767 | None:intergenic | 50.0% | |
| CGCAACTGAACTCAACTCGC+CGG | + | chr7_3:75650814-75650833 | Msa1124500:five_prime_UTR | 55.0% | |
| TGAAGTCCGGCGGTGTTTAC+CGG | - | chr7_3:75650836-75650855 | None:intergenic | 55.0% | |
| CTGAGCTGGAAACCGGTATC+GGG | - | chr7_3:75651128-75651147 | None:intergenic | 55.0% | |
| GCTGAGCTGGAAACCGGTAT+CGG | - | chr7_3:75651129-75651148 | None:intergenic | 55.0% | |
| ! | GATCACCGGCTGTGATGAAC+GGG | - | chr7_3:75651544-75651563 | None:intergenic | 55.0% |
| ! | GGATCACCGGCTGTGATGAA+CGG | - | chr7_3:75651545-75651564 | None:intergenic | 55.0% |
| GTAGCCCTCACCTTACAAGC+CGG | + | chr7_3:75652009-75652028 | Msa1124500:intron | 55.0% | |
| TGTAGTCCCCGATGTTCCTC+TGG | + | chr7_3:75653186-75653205 | Msa1124500:CDS | 55.0% | |
| TGCCGGTAGCCGACTAATTG+CGG | + | chr7_3:75653403-75653422 | Msa1124500:intron | 55.0% | |
| AGCCGACTAATTGCGGCCTT+TGG | + | chr7_3:75653410-75653429 | Msa1124500:intron | 55.0% | |
| TTGTGTTGGGTGTGAAGGGG+TGG | + | chr7_3:75653463-75653482 | Msa1124500:intron | 55.0% | |
| TTTCATCCGGTCTGTCGGAG+TGG | - | chr7_3:75653896-75653915 | None:intergenic | 55.0% | |
| GCCATTGTTGATGCCGCAGA+AGG | + | chr7_3:75653916-75653935 | Msa1124500:CDS | 55.0% | |
| TGAGCAGGATGGCAGTCAGT+GGG | - | chr7_3:75654125-75654144 | None:intergenic | 55.0% | |
| TTGAGCAGGATGGCAGTCAG+TGG | - | chr7_3:75654126-75654145 | None:intergenic | 55.0% | |
| ACTGACTGCCATCCTGCTCA+AGG | + | chr7_3:75654125-75654144 | Msa1124500:intron | 55.0% | |
| CTCTCAGATCAATGCACCGG+CGG | + | chr7_3:75654982-75655001 | Msa1124500:intron | 55.0% | |
| GAAGGCAACGACTAAGCCTG+TGG | + | chr7_3:75655496-75655515 | Msa1124500:intron | 55.0% | |
| ACGACTAAGCCTGTGGCAGT+TGG | + | chr7_3:75655503-75655522 | Msa1124500:CDS | 55.0% | |
| CTTGCCTGCTTCACATGCTC+AGG | - | chr7_3:75655545-75655564 | None:intergenic | 55.0% | |
| ! | ATAGTGGGATGGGGAGCTGA+TGG | + | chr7_3:75655681-75655700 | Msa1124500:CDS | 55.0% |
| ! | GGAGCTGATGGCGTGATTGT+TGG | + | chr7_3:75655693-75655712 | Msa1124500:CDS | 55.0% |
| AACTCGCCGGTAAACACCGC+CGG | + | chr7_3:75650827-75650846 | Msa1124500:five_prime_UTR | 60.0% | |
| ACACCGCCGGACTTCATCGT+CGG | + | chr7_3:75650840-75650859 | Msa1124500:five_prime_UTR | 60.0% | |
| CCACCTTCATTGCGGTCTGC+CGG | + | chr7_3:75653386-75653405 | Msa1124500:intron | 60.0% | |
| CTACCGGCAGACCGCAATGA+AGG | - | chr7_3:75653392-75653411 | None:intergenic | 60.0% | |
| GGCCGCAATTAGTCGGCTAC+CGG | - | chr7_3:75653408-75653427 | None:intergenic | 60.0% | |
| ATCCGGTCTGTCGGAGTGGT+GGG | - | chr7_3:75653892-75653911 | None:intergenic | 60.0% | |
| GTGAGCTCTGTTGGGGTCAC+TGG | + | chr7_3:75655041-75655060 | Msa1124500:CDS | 60.0% | |
| TGGCGGCCGACGATGAAGTC+CGG | - | chr7_3:75650849-75650868 | None:intergenic | 65.0% | |
| CCGGCAGACCGCAATGAAGG+TGG | - | chr7_3:75653389-75653408 | None:intergenic | 65.0% | |
| ! | TCGGAGTGGTGGGAGTCGTG+AGG | - | chr7_3:75653882-75653901 | None:intergenic | 65.0% |
| CTCCCACCACTCCGACAGAC+CGG | + | chr7_3:75653887-75653906 | Msa1124500:CDS | 65.0% | |
| CATCCGGTCTGTCGGAGTGG+TGG | - | chr7_3:75653893-75653912 | None:intergenic | 65.0% | |
| GGAGCCCGAGCGTCAGTTAG+TGG | + | chr7_3:75655062-75655081 | Msa1124500:CDS | 65.0% | |
| CGGCCGACGATGAAGTCCGG+CGG | - | chr7_3:75650846-75650865 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 75650705 | 75656042 | 75650705 | ID=Msa1124500;Name=Msa1124500 |
| chr7_3 | mRNA | 75650705 | 75656042 | 75650705 | ID=Msa1124500-mRNA-1;Parent=Msa1124500;Name=Msa1124500-mRNA-1;_AED=0.04;_eAED=0.04;_QI=202|1|1|1|0.88|0.8|10|227|312 |
| chr7_3 | exon | 75650705 | 75650891 | 75650705 | ID=Msa1124500-mRNA-1:exon:20402;Parent=Msa1124500-mRNA-1 |
| chr7_3 | exon | 75651065 | 75651268 | 75651065 | ID=Msa1124500-mRNA-1:exon:20403;Parent=Msa1124500-mRNA-1 |
| chr7_3 | exon | 75651530 | 75651676 | 75651530 | ID=Msa1124500-mRNA-1:exon:20404;Parent=Msa1124500-mRNA-1 |
| chr7_3 | exon | 75651750 | 75651815 | 75651750 | ID=Msa1124500-mRNA-1:exon:20405;Parent=Msa1124500-mRNA-1 |
| chr7_3 | exon | 75652689 | 75652797 | 75652689 | ID=Msa1124500-mRNA-1:exon:20406;Parent=Msa1124500-mRNA-1 |
| chr7_3 | exon | 75653182 | 75653258 | 75653182 | ID=Msa1124500-mRNA-1:exon:20407;Parent=Msa1124500-mRNA-1 |
| chr7_3 | exon | 75653874 | 75653951 | 75653874 | ID=Msa1124500-mRNA-1:exon:20408;Parent=Msa1124500-mRNA-1 |
| chr7_3 | exon | 75655041 | 75655118 | 75655041 | ID=Msa1124500-mRNA-1:exon:20409;Parent=Msa1124500-mRNA-1 |
| chr7_3 | exon | 75655500 | 75655559 | 75655500 | ID=Msa1124500-mRNA-1:exon:20410;Parent=Msa1124500-mRNA-1 |
| chr7_3 | exon | 75655681 | 75656042 | 75655681 | ID=Msa1124500-mRNA-1:exon:20411;Parent=Msa1124500-mRNA-1 |
| chr7_3 | five_prime_UTR | 75650705 | 75650891 | 75650705 | ID=Msa1124500-mRNA-1:five_prime_utr;Parent=Msa1124500-mRNA-1 |
| chr7_3 | five_prime_UTR | 75651065 | 75651079 | 75651065 | ID=Msa1124500-mRNA-1:five_prime_utr;Parent=Msa1124500-mRNA-1 |
| chr7_3 | CDS | 75651080 | 75651268 | 75651080 | ID=Msa1124500-mRNA-1:cds;Parent=Msa1124500-mRNA-1 |
| chr7_3 | CDS | 75651530 | 75651676 | 75651530 | ID=Msa1124500-mRNA-1:cds;Parent=Msa1124500-mRNA-1 |
| chr7_3 | CDS | 75651750 | 75651815 | 75651750 | ID=Msa1124500-mRNA-1:cds;Parent=Msa1124500-mRNA-1 |
| chr7_3 | CDS | 75652689 | 75652797 | 75652689 | ID=Msa1124500-mRNA-1:cds;Parent=Msa1124500-mRNA-1 |
| chr7_3 | CDS | 75653182 | 75653258 | 75653182 | ID=Msa1124500-mRNA-1:cds;Parent=Msa1124500-mRNA-1 |
| chr7_3 | CDS | 75653874 | 75653951 | 75653874 | ID=Msa1124500-mRNA-1:cds;Parent=Msa1124500-mRNA-1 |
| chr7_3 | CDS | 75655041 | 75655118 | 75655041 | ID=Msa1124500-mRNA-1:cds;Parent=Msa1124500-mRNA-1 |
| chr7_3 | CDS | 75655500 | 75655559 | 75655500 | ID=Msa1124500-mRNA-1:cds;Parent=Msa1124500-mRNA-1 |
| chr7_3 | CDS | 75655681 | 75655815 | 75655681 | ID=Msa1124500-mRNA-1:cds;Parent=Msa1124500-mRNA-1 |
| chr7_3 | three_prime_UTR | 75655816 | 75656042 | 75655816 | ID=Msa1124500-mRNA-1:three_prime_utr;Parent=Msa1124500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
