AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1126160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1126160 MtrunA17_Chr7g0266821 91.176 306 19 5 1 302 1 302 1.83e-179 497
Msa1126160 MtrunA17_Chr1g0178071 62.937 286 65 12 42 302 59 328 6.10e-103 304
Msa1126160 MtrunA17_Chr8g0345771 65.414 133 43 2 35 164 148 280 6.13e-52 178
Msa1126160 MtrunA17_Chr7g0276471 73.585 106 25 2 58 160 117 222 8.06e-48 166
Msa1126160 MtrunA17_Chr5g0422501 60.484 124 40 1 50 164 227 350 6.46e-45 157
Msa1126160 MtrunA17_Chr1g0198661 57.143 126 40 1 49 160 182 307 2.85e-41 147
Msa1126160 MtrunA17_Chr1g0213701 45.802 131 53 4 56 182 159 275 8.59e-29 112
Msa1126160 MtrunA17_Chr4g0012861 40.541 111 59 5 58 165 314 420 1.65e-15 77.0
Msa1126160 MtrunA17_Chr5g0432721 41.121 107 53 5 58 160 321 421 3.19e-15 76.3
Msa1126160 MtrunA17_Chr2g0281191 37.190 121 69 5 42 159 336 452 4.39e-15 75.9
Msa1126160 MtrunA17_Chr7g0244871 44.318 88 45 3 58 143 12 97 1.26e-14 68.6
Msa1126160 MtrunA17_Chr3g0107701 36.170 141 78 6 58 190 338 474 4.22e-14 72.8
Msa1126160 MtrunA17_Chr8g0389081 34.848 132 77 4 30 159 112 236 6.16e-14 72.4
Msa1126160 MtrunA17_Chr1g0199681 40.000 95 55 2 53 145 187 281 1.12e-12 68.6
Msa1126160 MtrunA17_Chr2g0282961 33.803 142 82 3 16 155 125 256 1.53e-12 67.8
Msa1126160 MtrunA17_Chr3g0115271 33.083 133 78 5 50 178 108 233 3.05e-12 67.0
Msa1126160 MtrunA17_Chr2g0326761 36.842 114 68 3 48 159 97 208 3.52e-12 67.0
Msa1126160 MtrunA17_Chr4g0070181 34.884 129 75 4 33 159 105 226 8.99e-12 65.9
Msa1126160 MtrunA17_Chr2g0301251 34.884 129 75 4 33 159 105 226 1.81e-11 64.7
Msa1126160 MtrunA17_Chr4g0046371 36.937 111 68 2 47 155 136 246 5.10e-11 63.2
Msa1126160 MtrunA17_Chr5g0417281 34.615 104 66 2 44 145 98 201 8.53e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1126160 AT5G06250.5 45.675 289 108 9 1 267 1 262 5.67e-69 215
Msa1126160 AT5G06250.4 46.154 286 105 9 1 264 1 259 3.35e-68 214
Msa1126160 AT5G06250.2 46.154 286 105 9 1 264 1 259 3.55e-68 214
Msa1126160 AT5G06250.3 44.983 289 89 8 1 264 1 244 1.95e-64 204
Msa1126160 AT5G06250.1 44.983 289 89 8 1 264 1 244 2.04e-64 204
Msa1126160 AT3G11580.1 51.923 208 80 4 54 247 24 225 3.25e-62 198
Msa1126160 AT2G36080.3 57.711 201 46 6 53 249 32 197 7.49e-62 196
Msa1126160 AT2G36080.1 57.711 201 46 6 53 249 32 197 7.61e-62 196
Msa1126160 AT3G11580.3 51.923 208 80 4 54 247 24 225 1.52e-61 200
Msa1126160 AT2G36080.4 80.357 112 18 1 53 160 32 143 2.41e-57 182
Msa1126160 AT2G36080.2 80.357 112 18 1 53 160 32 143 2.41e-57 182
Msa1126160 AT3G11580.4 73.109 119 20 1 54 160 24 142 4.56e-57 184
Msa1126160 AT3G11580.2 73.109 119 20 1 54 160 24 142 4.56e-57 184
Msa1126160 AT3G11580.5 73.109 119 20 1 54 160 24 142 4.56e-57 184
Msa1126160 AT3G61970.1 71.795 117 29 1 48 160 12 128 9.59e-54 177
Msa1126160 AT2G46870.1 66.929 127 37 3 39 160 14 140 6.93e-50 168
Msa1126160 AT1G13260.1 68.468 111 33 1 56 164 185 295 1.05e-47 163
Msa1126160 AT1G01030.2 46.018 226 91 7 54 249 51 275 1.67e-47 162
Msa1126160 AT1G01030.1 69.369 111 30 2 54 160 51 161 2.54e-46 160
Msa1126160 AT1G68840.2 60.630 127 47 1 55 178 184 310 5.79e-46 159
Msa1126160 AT1G68840.1 60.630 127 47 1 55 178 184 310 5.79e-46 159
Msa1126160 AT3G25730.1 63.063 111 37 1 56 162 180 290 1.36e-44 154
Msa1126160 AT4G01500.1 39.918 243 95 5 51 243 28 269 3.65e-42 148
Msa1126160 AT1G25560.1 57.812 128 41 2 55 173 191 314 4.80e-42 149
Msa1126160 AT1G51120.1 47.368 95 41 1 58 143 177 271 2.44e-24 101
Msa1126160 AT1G50680.1 45.918 98 41 1 58 143 156 253 1.93e-23 98.6
Msa1126160 AT4G32010.1 40.179 112 60 5 58 166 285 392 4.19e-15 76.3
Msa1126160 AT4G32010.2 40.179 112 60 5 58 166 281 388 4.26e-15 76.3
Msa1126160 AT2G30470.1 40.952 105 56 4 58 160 294 394 1.06e-14 75.1
Msa1126160 AT1G77850.2 35.455 110 67 2 52 159 112 219 6.56e-13 69.3
Msa1126160 AT1G77850.1 35.455 110 67 2 52 159 112 219 6.62e-13 69.3
Msa1126160 AT1G35240.1 37.931 116 69 3 59 172 126 240 2.38e-12 67.8
Msa1126160 AT2G28350.1 32.624 141 92 3 27 165 84 223 6.37e-12 66.6
Msa1126160 AT2G28350.2 32.624 141 92 3 27 165 84 223 6.51e-12 66.6
Msa1126160 AT1G35520.1 37.069 116 70 3 59 172 126 240 1.58e-11 65.1
Msa1126160 AT1G34310.1 36.207 116 71 3 59 172 126 240 2.01e-11 65.1
Msa1126160 AT1G34410.1 33.884 121 67 4 59 172 126 240 1.00e-10 62.8

Find 99 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACGTCGCTTGGTGTTAA+TGG 0.127068 7_3:+77644726 None:intergenic
TTGATTGAATCTAGCTAATA+TGG 0.221602 7_3:+77643180 None:intergenic
TAATAATTAAAATTAATTAA+AGG 0.231030 7_3:+77643072 None:intergenic
AGCAATCTGGTGACAAAGTT+TGG 0.259112 7_3:+77643307 None:intergenic
GAAATAGTTCGAGTACTTTC+AGG 0.260940 7_3:-77643404 Msa1126160:CDS
ATCTTTCTTGTCTTAAATTC+AGG 0.265779 7_3:-77642951 Msa1126160:three_prime_UTR
AATAATTAAAATTAATTAAA+GGG 0.270961 7_3:+77643073 None:intergenic
CTCAATTTATTAGTATATTT+AGG 0.273317 7_3:-77642996 Msa1126160:three_prime_UTR
TTAATATCTGCTTGATTGAT+AGG 0.273662 7_3:+77642873 None:intergenic
ATTGAGAAAGGTTCCTTTCA+TGG 0.274144 7_3:+77643013 None:intergenic
TATCTCTCAGCATGTTGTTT+TGG 0.292618 7_3:+77644681 None:intergenic
ATTCAGGAGATGCATGTAAA+TGG 0.299023 7_3:-77642935 Msa1126160:three_prime_UTR
TCTTCTAAGCTTTAGGGTTA+AGG 0.311942 7_3:-77643099 Msa1126160:three_prime_UTR
TTCAGGGTGCTGAGGCTGTT+TGG 0.322617 7_3:-77643387 Msa1126160:CDS
GGAGGTTCCGGTATTCATAT+TGG 0.328744 7_3:-77644590 Msa1126160:CDS
TTAATATTAATATTATTATC+AGG 0.333871 7_3:+77643345 None:intergenic
CAGGTAAGTGTTGGAGGTTC+CGG 0.351251 7_3:-77644602 Msa1126160:CDS
TGTGGTTGTGTTCTGACTTT+GGG 0.369690 7_3:+77643434 None:intergenic
CAAAGCTATGTTCTTACAAA+AGG 0.401403 7_3:-77644558 Msa1126160:CDS
GAGGTTGACGGTGGAGGTGG+TGG 0.410580 7_3:+77643238 None:intergenic
TATTTCTCAAACAAAATTTG+AGG 0.414952 7_3:+77644942 None:intergenic
TTCAACTTCCCTACGTCGCT+TGG 0.425371 7_3:+77644717 None:intergenic
TTGAAGGAGGTTGACGGTGG+AGG 0.432392 7_3:+77643232 None:intergenic
GCAATCTGGTGACAAAGTTT+GGG 0.439412 7_3:+77643308 None:intergenic
AAGGAGGTTGACGGTGGAGG+TGG 0.440000 7_3:+77643235 None:intergenic
TGGAGGTGGTGGTAGAATTG+TGG 0.441638 7_3:+77643249 None:intergenic
TACAAGAAACAACATCACTA+TGG 0.450273 7_3:-77644890 Msa1126160:CDS
GGATGATGATGAGTAGGATA+AGG 0.453506 7_3:+77644312 None:intergenic
GTGTGGTTGTGTTCTGACTT+TGG 0.459825 7_3:+77643433 None:intergenic
TAATATCTGCTTGATTGATA+GGG 0.460478 7_3:+77642874 None:intergenic
AGGATGAGTCAGGTAAGTGT+TGG 0.475422 7_3:-77644611 Msa1126160:CDS
GCTATGTTCTTACAAAAGGT+TGG 0.477263 7_3:-77644554 Msa1126160:CDS
GAGGATTTGAAGGAGGTTGA+CGG 0.478467 7_3:+77643226 None:intergenic
TTTGAGGATTTGAAAGAGAG+AGG 0.480033 7_3:+77644958 None:intergenic
GGAGGTGGTGGTAGAATTGT+GGG 0.483601 7_3:+77643250 None:intergenic
TATTAATATTATTATCAGGT+TGG 0.493103 7_3:+77643349 None:intergenic
TGTAGTACGTGAGTGGTTGA+AGG 0.493128 7_3:+77645004 None:intergenic
TACTGTTCCAATATGAATAC+CGG 0.505382 7_3:+77644583 None:intergenic
TTGAGGATTTGAAAGAGAGA+GGG 0.513453 7_3:+77644959 None:intergenic
CCATCTGTAGTGATGGCAAT+GGG 0.515422 7_3:-77644389 Msa1126160:CDS
GACATATTATAAGAGCAATC+TGG 0.517703 7_3:+77643294 None:intergenic
ATGCGCAGGATAGAGTTCTC+TGG 0.519337 7_3:+77644335 None:intergenic
ATCTCGTGGAGGCGCCGCCA+TGG 0.519364 7_3:-77644447 Msa1126160:CDS
CCCATTGCCATCACTACAGA+TGG 0.522140 7_3:+77644389 None:intergenic
TGTAGTGATGGCAATGGGAA+TGG 0.522719 7_3:-77644384 Msa1126160:CDS
TTGATTTCTTCTGAGTCTAG+TGG 0.523246 7_3:+77644654 None:intergenic
ATGAGTCAGGTAAGTGTTGG+AGG 0.531766 7_3:-77644608 Msa1126160:CDS
TGATTTCTTCTGAGTCTAGT+GGG 0.531823 7_3:+77644655 None:intergenic
AAATAGTTCGAGTACTTTCA+GGG 0.533392 7_3:-77643403 Msa1126160:CDS
ATGTGATGGTGAGGATTTGA+AGG 0.538757 7_3:+77643216 None:intergenic
ATATACTAATAAATTGAGAA+AGG 0.542638 7_3:+77643001 None:intergenic
TGGGAATAGCACTGTTCCTG+TGG 0.547485 7_3:-77644364 Msa1126160:CDS
CCATTAACACCAAGCGACGT+AGG 0.548021 7_3:-77644726 Msa1126160:CDS
GAGAGGGTGTGAGAGAGAAG+TGG 0.554099 7_3:+77644975 None:intergenic
CATCCCTTGTCATACCATGC+AGG 0.555918 7_3:-77644294 Msa1126160:intron
AGCAGATCCATCTGTAGTGA+TGG 0.561002 7_3:-77644396 Msa1126160:CDS
GAGAGAATCTAGTTAGGAGA+GGG 0.563078 7_3:+77643130 None:intergenic
CGAGTACTTTCAGGGTGCTG+AGG 0.563729 7_3:-77643395 Msa1126160:CDS
CATTAACACCAAGCGACGTA+GGG 0.563833 7_3:-77644725 Msa1126160:CDS
ATAGCACTGTTCCTGTGGGG+TGG 0.568873 7_3:-77644359 Msa1126160:CDS
AGTTCTCTGGACCACCCCAC+AGG 0.570942 7_3:+77644348 None:intergenic
AAAGATAAACGTCTTGATGC+TGG 0.575473 7_3:-77644519 Msa1126160:CDS
ATGTTGTTTCTTGTATTGTG+TGG 0.576167 7_3:+77644898 None:intergenic
GTAGTGATGGCAATGGGAAT+GGG 0.579455 7_3:-77644383 Msa1126160:CDS
GATTTGAAGGAGGTTGACGG+TGG 0.580120 7_3:+77643229 None:intergenic
TGAGTAGGATAAGGATGCGC+AGG 0.580460 7_3:+77644321 None:intergenic
AGAGAGAATCTAGTTAGGAG+AGG 0.581415 7_3:+77643129 None:intergenic
ATGGATCTGCTAACATGAGC+CGG 0.583256 7_3:+77644408 None:intergenic
TGGTAGTAACTCTACTCCAC+CGG 0.584083 7_3:-77644427 Msa1126160:CDS
GACAAGGGATGATGATGAGT+AGG 0.585445 7_3:+77644306 None:intergenic
CTCAACGGTTGTTTATCTCG+TGG 0.587033 7_3:-77644461 Msa1126160:CDS
GAGGCTGTTTGGAGTGAACA+TGG 0.594809 7_3:-77643376 Msa1126160:CDS
TCCATCTGTAGTGATGGCAA+TGG 0.596273 7_3:-77644390 Msa1126160:CDS
GGGAATAGCACTGTTCCTGT+GGG 0.597826 7_3:-77644363 Msa1126160:CDS
CGAACTATTTCCACAAGGTG+TGG 0.598711 7_3:+77643416 None:intergenic
AGCTGAACTAGAAGATGATG+TGG 0.605647 7_3:-77644823 Msa1126160:CDS
ATGATCAACTGATCCATGAA+AGG 0.608959 7_3:-77643026 Msa1126160:three_prime_UTR
AAGAAACAACATCACTATGG+TGG 0.609594 7_3:-77644887 Msa1126160:CDS
CTAGACTCAGAAGAAATCAA+AGG 0.611927 7_3:-77644651 Msa1126160:CDS
GTTCACGTTGAAGATTGTAG+AGG 0.616609 7_3:-77642974 Msa1126160:three_prime_UTR
AACGGTTGTTTATCTCGTGG+AGG 0.625722 7_3:-77644458 Msa1126160:CDS
GTTTGTTTGTAGTACGTGAG+TGG 0.627281 7_3:+77644997 None:intergenic
CAGAACACAACCACACCTTG+TGG 0.630986 7_3:-77643426 Msa1126160:CDS
GTTGTTGACGTAGCATGTGA+TGG 0.636988 7_3:+77643202 None:intergenic
AAAACCTGCATGGTATGACA+AGG 0.637700 7_3:+77644290 None:intergenic
TGATGGTGAGGATTTGAAGG+AGG 0.642677 7_3:+77643219 None:intergenic
AGTTGATCATGTCAATGACA+TGG 0.645829 7_3:+77643039 None:intergenic
GTTGTAATGTGACAGGTGAA+GGG 0.678694 7_3:-77643458 Msa1126160:intron
TGACGTAGCATGTGATGGTG+AGG 0.679050 7_3:+77643207 None:intergenic
AAACCTGCATGGTATGACAA+GGG 0.685749 7_3:+77644291 None:intergenic
CACGAGATAAACAACCGTTG+AGG 0.688403 7_3:+77644462 None:intergenic
GACACCGTGTACATCCTCAA+CGG 0.690188 7_3:-77644476 Msa1126160:CDS
TATAATATGTCATCAACACA+AGG 0.697764 7_3:-77643282 Msa1126160:CDS
ACAACCGTTGAGGATGTACA+CGG 0.701448 7_3:+77644472 None:intergenic
GATCTGCTAACATGAGCCGG+TGG 0.708271 7_3:+77644411 None:intergenic
GGAATAGCACTGTTCCTGTG+GGG 0.714296 7_3:-77644362 Msa1126160:CDS
GTACTCGAACTATTTCCACA+AGG 0.725974 7_3:+77643411 None:intergenic
GTGGAGTAGAGTTACTACCA+TGG 0.729540 7_3:+77644430 None:intergenic
GAGTAGAGTTACTACCATGG+CGG 0.790463 7_3:+77644433 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAAAATTAATTAAA+GGG + chr7_3:77644833-77644852 None:intergenic 0.0%
!! TAATAATTAAAATTAATTAA+AGG + chr7_3:77644834-77644853 None:intergenic 0.0%
!! AATAATTAAAATTAATTAAA+GGG + chr7_3:77644833-77644852 None:intergenic 0.0%
!! TAATAATTAAAATTAATTAA+AGG + chr7_3:77644834-77644853 None:intergenic 0.0%
!!! ATATTCAATATTTTACTTAG+AGG - chr7_3:77643686-77643705 Msa1126160:intron 15.0%
!! TATTAATATTATTATCAGGT+TGG + chr7_3:77644557-77644576 None:intergenic 15.0%
!! ATATACTAATAAATTGAGAA+AGG + chr7_3:77644905-77644924 None:intergenic 15.0%
!! CTCAATTTATTAGTATATTT+AGG - chr7_3:77644907-77644926 Msa1126160:CDS 15.0%
!!! ATATTCAATATTTTACTTAG+AGG - chr7_3:77643686-77643705 Msa1126160:intron 15.0%
!! TATTAATATTATTATCAGGT+TGG + chr7_3:77644557-77644576 None:intergenic 15.0%
!! ATATACTAATAAATTGAGAA+AGG + chr7_3:77644905-77644924 None:intergenic 15.0%
!! CTCAATTTATTAGTATATTT+AGG - chr7_3:77644907-77644926 Msa1126160:CDS 15.0%
!! TATTTCTCAAACAAAATTTG+AGG + chr7_3:77642964-77642983 None:intergenic 20.0%
!! ATGTATATAAGAGATTATAG+TGG + chr7_3:77643646-77643665 None:intergenic 20.0%
!! ATTCTATTACAAATTTCAGA+TGG - chr7_3:77644038-77644057 Msa1126160:intron 20.0%
!! AAATTAAATTCAACAAAAGC+AGG + chr7_3:77644243-77644262 None:intergenic 20.0%
!! TTGAATTGAAAATGAATGTA+TGG - chr7_3:77644410-77644429 Msa1126160:CDS 20.0%
!! TGAATTGAAAATGAATGTAT+GGG - chr7_3:77644411-77644430 Msa1126160:CDS 20.0%
!!! TTTTTTTTCTTCTAAGCTTT+AGG - chr7_3:77644797-77644816 Msa1126160:CDS 20.0%
!!! TTTTTTTCTTCTAAGCTTTA+GGG - chr7_3:77644798-77644817 Msa1126160:CDS 20.0%
!! TATTTCTCAAACAAAATTTG+AGG + chr7_3:77642964-77642983 None:intergenic 20.0%
!! ATGTATATAAGAGATTATAG+TGG + chr7_3:77643646-77643665 None:intergenic 20.0%
!! ATTCTATTACAAATTTCAGA+TGG - chr7_3:77644038-77644057 Msa1126160:intron 20.0%
!! AAATTAAATTCAACAAAAGC+AGG + chr7_3:77644243-77644262 None:intergenic 20.0%
!! TTGAATTGAAAATGAATGTA+TGG - chr7_3:77644410-77644429 Msa1126160:CDS 20.0%
!! TGAATTGAAAATGAATGTAT+GGG - chr7_3:77644411-77644430 Msa1126160:CDS 20.0%
!!! TTTTTTTTCTTCTAAGCTTT+AGG - chr7_3:77644797-77644816 Msa1126160:CDS 20.0%
!!! TTTTTTTCTTCTAAGCTTTA+GGG - chr7_3:77644798-77644817 Msa1126160:CDS 20.0%
!!! TATAAGAGATTATAGTGGAT+AGG + chr7_3:77643641-77643660 None:intergenic 25.0%
! TATTAGACGATTGTTTATCA+CGG + chr7_3:77643746-77643765 None:intergenic 25.0%
! ATTGTTTAGACGAAAAGTTT+AGG + chr7_3:77643846-77643865 None:intergenic 25.0%
! TAGTAATTTGAATTTCCCAT+GGG - chr7_3:77643997-77644016 Msa1126160:intron 25.0%
! TATTACAAATTTCAGATGGA+TGG - chr7_3:77644042-77644061 Msa1126160:intron 25.0%
!! TTAACGTTTTCAACGTTAAA+AGG - chr7_3:77644281-77644300 Msa1126160:intron 25.0%
! TATAATATGTCATCAACACA+AGG - chr7_3:77644621-77644640 Msa1126160:CDS 25.0%
! TTGATTGAATCTAGCTAATA+TGG + chr7_3:77644726-77644745 None:intergenic 25.0%
! AAAAAAGAGAGAATCTAGTT+AGG + chr7_3:77644782-77644801 None:intergenic 25.0%
! ATCTTTCTTGTCTTAAATTC+AGG - chr7_3:77644952-77644971 Msa1126160:five_prime_UTR 25.0%
!!! TATAAGAGATTATAGTGGAT+AGG + chr7_3:77643641-77643660 None:intergenic 25.0%
! TATTAGACGATTGTTTATCA+CGG + chr7_3:77643746-77643765 None:intergenic 25.0%
! ATTGTTTAGACGAAAAGTTT+AGG + chr7_3:77643846-77643865 None:intergenic 25.0%
! TAGTAATTTGAATTTCCCAT+GGG - chr7_3:77643997-77644016 Msa1126160:intron 25.0%
! TATTACAAATTTCAGATGGA+TGG - chr7_3:77644042-77644061 Msa1126160:intron 25.0%
!! TTAACGTTTTCAACGTTAAA+AGG - chr7_3:77644281-77644300 Msa1126160:intron 25.0%
! TATAATATGTCATCAACACA+AGG - chr7_3:77644621-77644640 Msa1126160:CDS 25.0%
! TTGATTGAATCTAGCTAATA+TGG + chr7_3:77644726-77644745 None:intergenic 25.0%
! AAAAAAGAGAGAATCTAGTT+AGG + chr7_3:77644782-77644801 None:intergenic 25.0%
! ATCTTTCTTGTCTTAAATTC+AGG - chr7_3:77644952-77644971 Msa1126160:five_prime_UTR 25.0%
!! ATGTTGTTTCTTGTATTGTG+TGG + chr7_3:77643008-77643027 None:intergenic 30.0%
TACAAGAAACAACATCACTA+TGG - chr7_3:77643013-77643032 Msa1126160:three_prime_UTR 30.0%
!!! AGGTTTGTTACTAAGTTTTG+AGG - chr7_3:77643272-77643291 Msa1126160:CDS 30.0%
TACTGTTCCAATATGAATAC+CGG + chr7_3:77643323-77643342 None:intergenic 30.0%
CAAAGCTATGTTCTTACAAA+AGG - chr7_3:77643345-77643364 Msa1126160:CDS 30.0%
TTAGACGAAAAGTTTAGGAA+GGG + chr7_3:77643841-77643860 None:intergenic 30.0%
TTTAGACGAAAAGTTTAGGA+AGG + chr7_3:77643842-77643861 None:intergenic 30.0%
CTAGTAATTTGAATTTCCCA+TGG - chr7_3:77643996-77644015 Msa1126160:intron 30.0%
CTGACAATATATATACCCAT+GGG + chr7_3:77644015-77644034 None:intergenic 30.0%
ACTGACAATATATATACCCA+TGG + chr7_3:77644016-77644035 None:intergenic 30.0%
AAAACATACATGCAACACAA+TGG + chr7_3:77644069-77644088 None:intergenic 30.0%
GCATGTTGCGTATTTATTTA+TGG - chr7_3:77644372-77644391 Msa1126160:CDS 30.0%
AAATAGTTCGAGTACTTTCA+GGG - chr7_3:77644500-77644519 Msa1126160:CDS 30.0%
GACATATTATAAGAGCAATC+TGG + chr7_3:77644612-77644631 None:intergenic 30.0%
!! ATGTTGTTTCTTGTATTGTG+TGG + chr7_3:77643008-77643027 None:intergenic 30.0%
TACAAGAAACAACATCACTA+TGG - chr7_3:77643013-77643032 Msa1126160:three_prime_UTR 30.0%
!!! AGGTTTGTTACTAAGTTTTG+AGG - chr7_3:77643272-77643291 Msa1126160:CDS 30.0%
TACTGTTCCAATATGAATAC+CGG + chr7_3:77643323-77643342 None:intergenic 30.0%
CAAAGCTATGTTCTTACAAA+AGG - chr7_3:77643345-77643364 Msa1126160:CDS 30.0%
TTAGACGAAAAGTTTAGGAA+GGG + chr7_3:77643841-77643860 None:intergenic 30.0%
TTTAGACGAAAAGTTTAGGA+AGG + chr7_3:77643842-77643861 None:intergenic 30.0%
CTAGTAATTTGAATTTCCCA+TGG - chr7_3:77643996-77644015 Msa1126160:intron 30.0%
CTGACAATATATATACCCAT+GGG + chr7_3:77644015-77644034 None:intergenic 30.0%
ACTGACAATATATATACCCA+TGG + chr7_3:77644016-77644035 None:intergenic 30.0%
AAAACATACATGCAACACAA+TGG + chr7_3:77644069-77644088 None:intergenic 30.0%
GCATGTTGCGTATTTATTTA+TGG - chr7_3:77644372-77644391 Msa1126160:CDS 30.0%
AAATAGTTCGAGTACTTTCA+GGG - chr7_3:77644500-77644519 Msa1126160:CDS 30.0%
GACATATTATAAGAGCAATC+TGG + chr7_3:77644612-77644631 None:intergenic 30.0%
TTGAGGATTTGAAAGAGAGA+GGG + chr7_3:77642947-77642966 None:intergenic 35.0%
TTTGAGGATTTGAAAGAGAG+AGG + chr7_3:77642948-77642967 None:intergenic 35.0%
AAGAAACAACATCACTATGG+TGG - chr7_3:77643016-77643035 Msa1126160:three_prime_UTR 35.0%
!!! GTTGTTTTGGAATAACGAGT+CGG + chr7_3:77643212-77643231 None:intergenic 35.0%
!! TATCTCTCAGCATGTTGTTT+TGG + chr7_3:77643225-77643244 None:intergenic 35.0%
TGATTTCTTCTGAGTCTAGT+GGG + chr7_3:77643251-77643270 None:intergenic 35.0%
TTGATTTCTTCTGAGTCTAG+TGG + chr7_3:77643252-77643271 None:intergenic 35.0%
CTAGACTCAGAAGAAATCAA+AGG - chr7_3:77643252-77643271 Msa1126160:CDS 35.0%
GCTATGTTCTTACAAAAGGT+TGG - chr7_3:77643349-77643368 Msa1126160:CDS 35.0%
AAAGATAAACGTCTTGATGC+TGG - chr7_3:77643384-77643403 Msa1126160:CDS 35.0%
AAGGGTAACTTCCAGTTATT+TGG - chr7_3:77644128-77644147 Msa1126160:intron 35.0%
AGGGTAACTTCCAGTTATTT+GGG - chr7_3:77644129-77644148 Msa1126160:intron 35.0%
ATAATGTGACCTAAAGTGTG+TGG - chr7_3:77644200-77644219 Msa1126160:intron 35.0%
TTTCAACGTTAAAAGGTTGC+AGG - chr7_3:77644288-77644307 Msa1126160:intron 35.0%
! TGTTTGTTTCTTTCGCTTGT+TGG - chr7_3:77644325-77644344 Msa1126160:CDS 35.0%
! GTTTGTTTCTTTCGCTTGTT+GGG - chr7_3:77644326-77644345 Msa1126160:CDS 35.0%
GAAATAGTTCGAGTACTTTC+AGG - chr7_3:77644499-77644518 Msa1126160:CDS 35.0%
!! TCTTCTAAGCTTTAGGGTTA+AGG - chr7_3:77644804-77644823 Msa1126160:CDS 35.0%
AGTTGATCATGTCAATGACA+TGG + chr7_3:77644867-77644886 None:intergenic 35.0%
ATGATCAACTGATCCATGAA+AGG - chr7_3:77644877-77644896 Msa1126160:CDS 35.0%
ATTGAGAAAGGTTCCTTTCA+TGG + chr7_3:77644893-77644912 None:intergenic 35.0%
ATTCAGGAGATGCATGTAAA+TGG - chr7_3:77644968-77644987 Msa1126160:five_prime_UTR 35.0%
TTGAGGATTTGAAAGAGAGA+GGG + chr7_3:77642947-77642966 None:intergenic 35.0%
TTTGAGGATTTGAAAGAGAG+AGG + chr7_3:77642948-77642967 None:intergenic 35.0%
AAGAAACAACATCACTATGG+TGG - chr7_3:77643016-77643035 Msa1126160:three_prime_UTR 35.0%
!!! GTTGTTTTGGAATAACGAGT+CGG + chr7_3:77643212-77643231 None:intergenic 35.0%
!! TATCTCTCAGCATGTTGTTT+TGG + chr7_3:77643225-77643244 None:intergenic 35.0%
TGATTTCTTCTGAGTCTAGT+GGG + chr7_3:77643251-77643270 None:intergenic 35.0%
TTGATTTCTTCTGAGTCTAG+TGG + chr7_3:77643252-77643271 None:intergenic 35.0%
CTAGACTCAGAAGAAATCAA+AGG - chr7_3:77643252-77643271 Msa1126160:CDS 35.0%
GCTATGTTCTTACAAAAGGT+TGG - chr7_3:77643349-77643368 Msa1126160:CDS 35.0%
AAAGATAAACGTCTTGATGC+TGG - chr7_3:77643384-77643403 Msa1126160:CDS 35.0%
AAGGGTAACTTCCAGTTATT+TGG - chr7_3:77644128-77644147 Msa1126160:intron 35.0%
AGGGTAACTTCCAGTTATTT+GGG - chr7_3:77644129-77644148 Msa1126160:intron 35.0%
ATAATGTGACCTAAAGTGTG+TGG - chr7_3:77644200-77644219 Msa1126160:intron 35.0%
TTTCAACGTTAAAAGGTTGC+AGG - chr7_3:77644288-77644307 Msa1126160:intron 35.0%
! TGTTTGTTTCTTTCGCTTGT+TGG - chr7_3:77644325-77644344 Msa1126160:CDS 35.0%
! GTTTGTTTCTTTCGCTTGTT+GGG - chr7_3:77644326-77644345 Msa1126160:CDS 35.0%
GAAATAGTTCGAGTACTTTC+AGG - chr7_3:77644499-77644518 Msa1126160:CDS 35.0%
!! TCTTCTAAGCTTTAGGGTTA+AGG - chr7_3:77644804-77644823 Msa1126160:CDS 35.0%
AGTTGATCATGTCAATGACA+TGG + chr7_3:77644867-77644886 None:intergenic 35.0%
ATGATCAACTGATCCATGAA+AGG - chr7_3:77644877-77644896 Msa1126160:CDS 35.0%
ATTGAGAAAGGTTCCTTTCA+TGG + chr7_3:77644893-77644912 None:intergenic 35.0%
ATTCAGGAGATGCATGTAAA+TGG - chr7_3:77644968-77644987 Msa1126160:five_prime_UTR 35.0%
GTTTGTTTGTAGTACGTGAG+TGG + chr7_3:77642909-77642928 None:intergenic 40.0%
AGCTGAACTAGAAGATGATG+TGG - chr7_3:77643080-77643099 Msa1126160:three_prime_UTR 40.0%
!!! CTAAGTTTTGAGGATGAGTC+AGG - chr7_3:77643282-77643301 Msa1126160:CDS 40.0%
! GGATGATGATGAGTAGGATA+AGG + chr7_3:77643594-77643613 None:intergenic 40.0%
AAACCTGCATGGTATGACAA+GGG + chr7_3:77643615-77643634 None:intergenic 40.0%
AAAACCTGCATGGTATGACA+AGG + chr7_3:77643616-77643635 None:intergenic 40.0%
TGGATAGGTAAAAACCTGCA+TGG + chr7_3:77643626-77643645 None:intergenic 40.0%
CTAATTACTCGTGCACTATG+TGG + chr7_3:77643895-77643914 None:intergenic 40.0%
! ACTTCCAGTTATTTGGGACT+TGG - chr7_3:77644135-77644154 Msa1126160:intron 40.0%
TGTTGTAATGTGACAGGTGA+AGG - chr7_3:77644444-77644463 Msa1126160:CDS 40.0%
GTTGTAATGTGACAGGTGAA+GGG - chr7_3:77644445-77644464 Msa1126160:CDS 40.0%
TGTGGTTGTGTTCTGACTTT+GGG + chr7_3:77644472-77644491 None:intergenic 40.0%
GTACTCGAACTATTTCCACA+AGG + chr7_3:77644495-77644514 None:intergenic 40.0%
GCAATCTGGTGACAAAGTTT+GGG + chr7_3:77644598-77644617 None:intergenic 40.0%
AGCAATCTGGTGACAAAGTT+TGG + chr7_3:77644599-77644618 None:intergenic 40.0%
! ATGTGATGGTGAGGATTTGA+AGG + chr7_3:77644690-77644709 None:intergenic 40.0%
GAGAGAATCTAGTTAGGAGA+GGG + chr7_3:77644776-77644795 None:intergenic 40.0%
AGAGAGAATCTAGTTAGGAG+AGG + chr7_3:77644777-77644796 None:intergenic 40.0%
GTTCACGTTGAAGATTGTAG+AGG - chr7_3:77644929-77644948 Msa1126160:exon 40.0%
GTTTGTTTGTAGTACGTGAG+TGG + chr7_3:77642909-77642928 None:intergenic 40.0%
AGCTGAACTAGAAGATGATG+TGG - chr7_3:77643080-77643099 Msa1126160:three_prime_UTR 40.0%
!!! CTAAGTTTTGAGGATGAGTC+AGG - chr7_3:77643282-77643301 Msa1126160:CDS 40.0%
! GGATGATGATGAGTAGGATA+AGG + chr7_3:77643594-77643613 None:intergenic 40.0%
AAACCTGCATGGTATGACAA+GGG + chr7_3:77643615-77643634 None:intergenic 40.0%
AAAACCTGCATGGTATGACA+AGG + chr7_3:77643616-77643635 None:intergenic 40.0%
TGGATAGGTAAAAACCTGCA+TGG + chr7_3:77643626-77643645 None:intergenic 40.0%
CTAATTACTCGTGCACTATG+TGG + chr7_3:77643895-77643914 None:intergenic 40.0%
! ACTTCCAGTTATTTGGGACT+TGG - chr7_3:77644135-77644154 Msa1126160:intron 40.0%
TGTTGTAATGTGACAGGTGA+AGG - chr7_3:77644444-77644463 Msa1126160:CDS 40.0%
GTTGTAATGTGACAGGTGAA+GGG - chr7_3:77644445-77644464 Msa1126160:CDS 40.0%
TGTGGTTGTGTTCTGACTTT+GGG + chr7_3:77644472-77644491 None:intergenic 40.0%
GTACTCGAACTATTTCCACA+AGG + chr7_3:77644495-77644514 None:intergenic 40.0%
GCAATCTGGTGACAAAGTTT+GGG + chr7_3:77644598-77644617 None:intergenic 40.0%
AGCAATCTGGTGACAAAGTT+TGG + chr7_3:77644599-77644618 None:intergenic 40.0%
! ATGTGATGGTGAGGATTTGA+AGG + chr7_3:77644690-77644709 None:intergenic 40.0%
GAGAGAATCTAGTTAGGAGA+GGG + chr7_3:77644776-77644795 None:intergenic 40.0%
AGAGAGAATCTAGTTAGGAG+AGG + chr7_3:77644777-77644796 None:intergenic 40.0%
GTTCACGTTGAAGATTGTAG+AGG - chr7_3:77644929-77644948 Msa1126160:exon 40.0%
TGTAGTACGTGAGTGGTTGA+AGG + chr7_3:77642902-77642921 None:intergenic 45.0%
CATTAACACCAAGCGACGTA+GGG - chr7_3:77643178-77643197 Msa1126160:exon 45.0%
AGGATGAGTCAGGTAAGTGT+TGG - chr7_3:77643292-77643311 Msa1126160:CDS 45.0%
!! ATGAGTCAGGTAAGTGTTGG+AGG - chr7_3:77643295-77643314 Msa1126160:CDS 45.0%
GGAGGTTCCGGTATTCATAT+TGG - chr7_3:77643313-77643332 Msa1126160:CDS 45.0%
ACAACCGTTGAGGATGTACA+CGG + chr7_3:77643434-77643453 None:intergenic 45.0%
CACGAGATAAACAACCGTTG+AGG + chr7_3:77643444-77643463 None:intergenic 45.0%
CTCAACGGTTGTTTATCTCG+TGG - chr7_3:77643442-77643461 Msa1126160:CDS 45.0%
AACGGTTGTTTATCTCGTGG+AGG - chr7_3:77643445-77643464 Msa1126160:CDS 45.0%
GAGTAGAGTTACTACCATGG+CGG + chr7_3:77643473-77643492 None:intergenic 45.0%
GTGGAGTAGAGTTACTACCA+TGG + chr7_3:77643476-77643495 None:intergenic 45.0%
TGGTAGTAACTCTACTCCAC+CGG - chr7_3:77643476-77643495 Msa1126160:intron 45.0%
ATGGATCTGCTAACATGAGC+CGG + chr7_3:77643498-77643517 None:intergenic 45.0%
AGCAGATCCATCTGTAGTGA+TGG - chr7_3:77643507-77643526 Msa1126160:intron 45.0%
TCCATCTGTAGTGATGGCAA+TGG - chr7_3:77643513-77643532 Msa1126160:intron 45.0%
CCATCTGTAGTGATGGCAAT+GGG - chr7_3:77643514-77643533 Msa1126160:intron 45.0%
TGTAGTGATGGCAATGGGAA+TGG - chr7_3:77643519-77643538 Msa1126160:intron 45.0%
GTAGTGATGGCAATGGGAAT+GGG - chr7_3:77643520-77643539 Msa1126160:intron 45.0%
! GACAAGGGATGATGATGAGT+AGG + chr7_3:77643600-77643619 None:intergenic 45.0%
! TCCAGTTATTTGGGACTTGG+AGG - chr7_3:77644138-77644157 Msa1126160:intron 45.0%
TCCTCCAAGTCCCAAATAAC+TGG + chr7_3:77644142-77644161 None:intergenic 45.0%
! ATTTGGGACTTGGAGGAATG+AGG - chr7_3:77644145-77644164 Msa1126160:intron 45.0%
CAACGTTAAAAGGTTGCAGG+AGG - chr7_3:77644291-77644310 Msa1126160:intron 45.0%
TGCACGTGTTGTAATGTGAC+AGG - chr7_3:77644438-77644457 Msa1126160:CDS 45.0%
GTGTGGTTGTGTTCTGACTT+TGG + chr7_3:77644473-77644492 None:intergenic 45.0%
CGAACTATTTCCACAAGGTG+TGG + chr7_3:77644490-77644509 None:intergenic 45.0%
GAGGATTTGAAGGAGGTTGA+CGG + chr7_3:77644680-77644699 None:intergenic 45.0%
! TGATGGTGAGGATTTGAAGG+AGG + chr7_3:77644687-77644706 None:intergenic 45.0%
GTTGTTGACGTAGCATGTGA+TGG + chr7_3:77644704-77644723 None:intergenic 45.0%
TGTAGTACGTGAGTGGTTGA+AGG + chr7_3:77642902-77642921 None:intergenic 45.0%
CATTAACACCAAGCGACGTA+GGG - chr7_3:77643178-77643197 Msa1126160:exon 45.0%
AGGATGAGTCAGGTAAGTGT+TGG - chr7_3:77643292-77643311 Msa1126160:CDS 45.0%
!! ATGAGTCAGGTAAGTGTTGG+AGG - chr7_3:77643295-77643314 Msa1126160:CDS 45.0%
GGAGGTTCCGGTATTCATAT+TGG - chr7_3:77643313-77643332 Msa1126160:CDS 45.0%
ACAACCGTTGAGGATGTACA+CGG + chr7_3:77643434-77643453 None:intergenic 45.0%
CACGAGATAAACAACCGTTG+AGG + chr7_3:77643444-77643463 None:intergenic 45.0%
CTCAACGGTTGTTTATCTCG+TGG - chr7_3:77643442-77643461 Msa1126160:CDS 45.0%
AACGGTTGTTTATCTCGTGG+AGG - chr7_3:77643445-77643464 Msa1126160:CDS 45.0%
GAGTAGAGTTACTACCATGG+CGG + chr7_3:77643473-77643492 None:intergenic 45.0%
GTGGAGTAGAGTTACTACCA+TGG + chr7_3:77643476-77643495 None:intergenic 45.0%
TGGTAGTAACTCTACTCCAC+CGG - chr7_3:77643476-77643495 Msa1126160:intron 45.0%
ATGGATCTGCTAACATGAGC+CGG + chr7_3:77643498-77643517 None:intergenic 45.0%
AGCAGATCCATCTGTAGTGA+TGG - chr7_3:77643507-77643526 Msa1126160:intron 45.0%
TCCATCTGTAGTGATGGCAA+TGG - chr7_3:77643513-77643532 Msa1126160:intron 45.0%
CCATCTGTAGTGATGGCAAT+GGG - chr7_3:77643514-77643533 Msa1126160:intron 45.0%
TGTAGTGATGGCAATGGGAA+TGG - chr7_3:77643519-77643538 Msa1126160:intron 45.0%
GTAGTGATGGCAATGGGAAT+GGG - chr7_3:77643520-77643539 Msa1126160:intron 45.0%
! GACAAGGGATGATGATGAGT+AGG + chr7_3:77643600-77643619 None:intergenic 45.0%
! TCCAGTTATTTGGGACTTGG+AGG - chr7_3:77644138-77644157 Msa1126160:intron 45.0%
TCCTCCAAGTCCCAAATAAC+TGG + chr7_3:77644142-77644161 None:intergenic 45.0%
! ATTTGGGACTTGGAGGAATG+AGG - chr7_3:77644145-77644164 Msa1126160:intron 45.0%
CAACGTTAAAAGGTTGCAGG+AGG - chr7_3:77644291-77644310 Msa1126160:intron 45.0%
TGCACGTGTTGTAATGTGAC+AGG - chr7_3:77644438-77644457 Msa1126160:CDS 45.0%
GTGTGGTTGTGTTCTGACTT+TGG + chr7_3:77644473-77644492 None:intergenic 45.0%
CGAACTATTTCCACAAGGTG+TGG + chr7_3:77644490-77644509 None:intergenic 45.0%
GAGGATTTGAAGGAGGTTGA+CGG + chr7_3:77644680-77644699 None:intergenic 45.0%
! TGATGGTGAGGATTTGAAGG+AGG + chr7_3:77644687-77644706 None:intergenic 45.0%
GTTGTTGACGTAGCATGTGA+TGG + chr7_3:77644704-77644723 None:intergenic 45.0%
!!! TATTTTATTCTTTTAAATAA+AGG - chr7_3:77644109-77644128 Msa1126160:intron 5.0%
!!! ATTTTATTCTTTTAAATAAA+GGG - chr7_3:77644110-77644129 Msa1126160:intron 5.0%
!! TTAATATTAATATTATTATC+AGG + chr7_3:77644561-77644580 None:intergenic 5.0%
!!! TATTTTATTCTTTTAAATAA+AGG - chr7_3:77644109-77644128 Msa1126160:intron 5.0%
!!! ATTTTATTCTTTTAAATAAA+GGG - chr7_3:77644110-77644129 Msa1126160:intron 5.0%
!! TTAATATTAATATTATTATC+AGG + chr7_3:77644561-77644580 None:intergenic 5.0%
!! CCTACGTCGCTTGGTGTTAA+TGG + chr7_3:77643180-77643199 None:intergenic 50.0%
CCATTAACACCAAGCGACGT+AGG - chr7_3:77643177-77643196 Msa1126160:exon 50.0%
TTCAACTTCCCTACGTCGCT+TGG + chr7_3:77643189-77643208 None:intergenic 50.0%
!! CAGGTAAGTGTTGGAGGTTC+CGG - chr7_3:77643301-77643320 Msa1126160:CDS 50.0%
GACACCGTGTACATCCTCAA+CGG - chr7_3:77643427-77643446 Msa1126160:CDS 50.0%
CCCATTGCCATCACTACAGA+TGG + chr7_3:77643517-77643536 None:intergenic 50.0%
TGGGAATAGCACTGTTCCTG+TGG - chr7_3:77643539-77643558 Msa1126160:intron 50.0%
GGGAATAGCACTGTTCCTGT+GGG - chr7_3:77643540-77643559 Msa1126160:intron 50.0%
GGAATAGCACTGTTCCTGTG+GGG - chr7_3:77643541-77643560 Msa1126160:intron 50.0%
ATGCGCAGGATAGAGTTCTC+TGG + chr7_3:77643571-77643590 None:intergenic 50.0%
TGAGTAGGATAAGGATGCGC+AGG + chr7_3:77643585-77643604 None:intergenic 50.0%
CATCCCTTGTCATACCATGC+AGG - chr7_3:77643609-77643628 Msa1126160:intron 50.0%
CAGAACACAACCACACCTTG+TGG - chr7_3:77644477-77644496 Msa1126160:CDS 50.0%
! GAGGCTGTTTGGAGTGAACA+TGG - chr7_3:77644527-77644546 Msa1126160:CDS 50.0%
! GGAGGTGGTGGTAGAATTGT+GGG + chr7_3:77644656-77644675 None:intergenic 50.0%
! TGGAGGTGGTGGTAGAATTG+TGG + chr7_3:77644657-77644676 None:intergenic 50.0%
GATTTGAAGGAGGTTGACGG+TGG + chr7_3:77644677-77644696 None:intergenic 50.0%
! TGACGTAGCATGTGATGGTG+AGG + chr7_3:77644699-77644718 None:intergenic 50.0%
!! CCTACGTCGCTTGGTGTTAA+TGG + chr7_3:77643180-77643199 None:intergenic 50.0%
CCATTAACACCAAGCGACGT+AGG - chr7_3:77643177-77643196 Msa1126160:exon 50.0%
TTCAACTTCCCTACGTCGCT+TGG + chr7_3:77643189-77643208 None:intergenic 50.0%
!! CAGGTAAGTGTTGGAGGTTC+CGG - chr7_3:77643301-77643320 Msa1126160:CDS 50.0%
GACACCGTGTACATCCTCAA+CGG - chr7_3:77643427-77643446 Msa1126160:CDS 50.0%
CCCATTGCCATCACTACAGA+TGG + chr7_3:77643517-77643536 None:intergenic 50.0%
TGGGAATAGCACTGTTCCTG+TGG - chr7_3:77643539-77643558 Msa1126160:intron 50.0%
GGGAATAGCACTGTTCCTGT+GGG - chr7_3:77643540-77643559 Msa1126160:intron 50.0%
GGAATAGCACTGTTCCTGTG+GGG - chr7_3:77643541-77643560 Msa1126160:intron 50.0%
ATGCGCAGGATAGAGTTCTC+TGG + chr7_3:77643571-77643590 None:intergenic 50.0%
TGAGTAGGATAAGGATGCGC+AGG + chr7_3:77643585-77643604 None:intergenic 50.0%
CATCCCTTGTCATACCATGC+AGG - chr7_3:77643609-77643628 Msa1126160:intron 50.0%
CAGAACACAACCACACCTTG+TGG - chr7_3:77644477-77644496 Msa1126160:CDS 50.0%
! GAGGCTGTTTGGAGTGAACA+TGG - chr7_3:77644527-77644546 Msa1126160:CDS 50.0%
! GGAGGTGGTGGTAGAATTGT+GGG + chr7_3:77644656-77644675 None:intergenic 50.0%
! TGGAGGTGGTGGTAGAATTG+TGG + chr7_3:77644657-77644676 None:intergenic 50.0%
GATTTGAAGGAGGTTGACGG+TGG + chr7_3:77644677-77644696 None:intergenic 50.0%
! TGACGTAGCATGTGATGGTG+AGG + chr7_3:77644699-77644718 None:intergenic 50.0%
! GAGAGGGTGTGAGAGAGAAG+TGG + chr7_3:77642931-77642950 None:intergenic 55.0%
GATCTGCTAACATGAGCCGG+TGG + chr7_3:77643495-77643514 None:intergenic 55.0%
ATAGCACTGTTCCTGTGGGG+TGG - chr7_3:77643544-77643563 Msa1126160:intron 55.0%
GGCTTCACGCCACACACTTT+AGG + chr7_3:77644212-77644231 None:intergenic 55.0%
!! CGAGTACTTTCAGGGTGCTG+AGG - chr7_3:77644508-77644527 Msa1126160:CDS 55.0%
!! TTCAGGGTGCTGAGGCTGTT+TGG - chr7_3:77644516-77644535 Msa1126160:CDS 55.0%
TTGAAGGAGGTTGACGGTGG+AGG + chr7_3:77644674-77644693 None:intergenic 55.0%
! GAGAGGGTGTGAGAGAGAAG+TGG + chr7_3:77642931-77642950 None:intergenic 55.0%
GATCTGCTAACATGAGCCGG+TGG + chr7_3:77643495-77643514 None:intergenic 55.0%
ATAGCACTGTTCCTGTGGGG+TGG - chr7_3:77643544-77643563 Msa1126160:intron 55.0%
GGCTTCACGCCACACACTTT+AGG + chr7_3:77644212-77644231 None:intergenic 55.0%
!! CGAGTACTTTCAGGGTGCTG+AGG - chr7_3:77644508-77644527 Msa1126160:CDS 55.0%
!! TTCAGGGTGCTGAGGCTGTT+TGG - chr7_3:77644516-77644535 Msa1126160:CDS 55.0%
TTGAAGGAGGTTGACGGTGG+AGG + chr7_3:77644674-77644693 None:intergenic 55.0%
AGTTCTCTGGACCACCCCAC+AGG + chr7_3:77643558-77643577 None:intergenic 60.0%
CAACAAAAGCAGGCGCGCGT+AGG + chr7_3:77644233-77644252 None:intergenic 60.0%
AAGGAGGTTGACGGTGGAGG+TGG + chr7_3:77644671-77644690 None:intergenic 60.0%
AGTTCTCTGGACCACCCCAC+AGG + chr7_3:77643558-77643577 None:intergenic 60.0%
CAACAAAAGCAGGCGCGCGT+AGG + chr7_3:77644233-77644252 None:intergenic 60.0%
AAGGAGGTTGACGGTGGAGG+TGG + chr7_3:77644671-77644690 None:intergenic 60.0%
GAGGTTGACGGTGGAGGTGG+TGG + chr7_3:77644668-77644687 None:intergenic 65.0%
GAGGTTGACGGTGGAGGTGG+TGG + chr7_3:77644668-77644687 None:intergenic 65.0%
!! ATCTCGTGGAGGCGCCGCCA+TGG - chr7_3:77643456-77643475 Msa1126160:intron 70.0%
!! ATCTCGTGGAGGCGCCGCCA+TGG - chr7_3:77643456-77643475 Msa1126160:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 77642878 77645047 77642878 ID=Msa1126160;Name=Msa1126160
chr7_3 mRNA 77642878 77645047 77642878 ID=Msa1126160-mRNA-1;Parent=Msa1126160;Name=Msa1126160-mRNA-1;_AED=0.01;_eAED=0.01;_QI=116|1|1|1|1|1|2|316|302
chr7_3 exon 77642878 77643465 77642878 ID=Msa1126160-mRNA-1:exon:21520;Parent=Msa1126160-mRNA-1
chr7_3 exon 77644295 77645047 77644295 ID=Msa1126160-mRNA-1:exon:21519;Parent=Msa1126160-mRNA-1
chr7_3 five_prime_UTR 77644932 77645047 77644932 ID=Msa1126160-mRNA-1:five_prime_utr;Parent=Msa1126160-mRNA-1
chr7_3 CDS 77644295 77644931 77644295 ID=Msa1126160-mRNA-1:cds;Parent=Msa1126160-mRNA-1
chr7_3 CDS 77643194 77643465 77643194 ID=Msa1126160-mRNA-1:cds;Parent=Msa1126160-mRNA-1
chr7_3 three_prime_UTR 77642878 77643193 77642878 ID=Msa1126160-mRNA-1:three_prime_utr;Parent=Msa1126160-mRNA-1
Gene Sequence

>Msa1126160

ATGTCAATAAACCACACAATACAAGAAACAACATCACTATGGTGGAATCAACAACAACAACAAAGAACTCAACAAGATGCAGAAGAAGCTGAACTAGAAGATGATGTGGTTTTAGAATCAATAATGAAACTAAAAACAACAGAAGCATCATCAGAAGAAGAGAAAGAAGCTATGTTCGAGAAACCATTAACACCAAGCGACGTAGGGAAGTTGAACCGACTCGTTATTCCAAAACAACATGCTGAGAGATATTTCCCACTAGACTCAGAAGAAATCAAAGGTTTGTTACTAAGTTTTGAGGATGAGTCAGGTAAGTGTTGGAGGTTCCGGTATTCATATTGGAACAGTAGTCAAAGCTATGTTCTTACAAAAGGTTGGAGTCGTTATGTTAAAGATAAACGTCTTGATGCTGGTGATGTTGTTTTGTTTCAAAGACACCGTGTACATCCTCAACGGTTGTTTATCTCGTGGAGGCGCCGCCATGGTAGTAACTCTACTCCACCGGCTCATGTTAGCAGATCCATCTGTAGTGATGGCAATGGGAATGGGAATAGCACTGTTCCTGTGGGGTGGTCCAGAGAACTCTATCCTGCGCATCCTTATCCTACTCATCATCATCCCTTGTCATACCATGCAGGTGAAGGGTCCCAAAGTCAGAACACAACCACACCTTGTGGAAATAGTTCGAGTACTTTCAGGGTGCTGAGGCTGTTTGGAGTGAACATGGAATGCCAACCTGATAATAATATTAATATTAACAATATTAATGATTCCCAAACTTTGTCACCAGATTGCTCTTATAATATGTCATCAACACAAGGCACAGCTATCCCACAATTCTACCACCACCTCCACCGTCAACCTCCTTCAAATCCTCACCATCACATGCTACGTCAACAACCATATTAG
Protein sequence

>Msa1126160

MSINHTIQETTSLWWNQQQQQRTQQDAEEAELEDDVVLESIMKLKTTEASSEEEKEAMFEKPLTPSDVGKLNRLVIPKQHAERYFPLDSEEIKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRVHPQRLFISWRRRHGSNSTPPAHVSRSICSDGNGNGNSTVPVGWSRELYPAHPYPTHHHPLSYHAGEGSQSQNTTTPCGNSSSTFRVLRLFGVNMECQPDNNININNINDSQTLSPDCSYNMSSTQGTAIPQFYHHLHRQPPSNPHHHMLRQQPY*