AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1166990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166990 MtrunA17_Chr7g0266821 91.205 307 18 5 1 303 1 302 1.51e-180 499
Msa1166990 MtrunA17_Chr1g0178071 56.637 339 85 14 11 303 6 328 2.68e-101 300
Msa1166990 MtrunA17_Chr8g0345771 65.414 133 43 2 36 165 148 280 5.87e-52 178
Msa1166990 MtrunA17_Chr7g0276471 73.585 106 25 2 59 161 117 222 5.52e-48 166
Msa1166990 MtrunA17_Chr5g0422501 60.484 124 40 1 51 165 227 350 5.39e-45 157
Msa1166990 MtrunA17_Chr1g0198661 57.143 126 40 1 50 161 182 307 2.56e-41 147
Msa1166990 MtrunA17_Chr1g0213701 45.802 131 53 4 57 183 159 275 6.85e-29 112
Msa1166990 MtrunA17_Chr4g0012861 40.541 111 59 5 59 166 314 420 1.40e-15 77.4
Msa1166990 MtrunA17_Chr5g0432721 41.121 107 53 5 59 161 321 421 2.50e-15 76.3
Msa1166990 MtrunA17_Chr2g0281191 37.190 121 69 5 43 160 336 452 3.81e-15 75.9
Msa1166990 MtrunA17_Chr7g0244871 44.318 88 45 3 59 144 12 97 1.09e-14 68.9
Msa1166990 MtrunA17_Chr3g0107701 36.170 141 78 6 59 191 338 474 3.63e-14 73.2
Msa1166990 MtrunA17_Chr8g0389081 34.848 132 77 4 31 160 112 236 5.65e-14 72.4
Msa1166990 MtrunA17_Chr1g0199681 40.000 95 55 2 54 146 187 281 1.10e-12 68.6
Msa1166990 MtrunA17_Chr3g0115271 33.083 133 78 5 51 179 108 233 2.74e-12 67.0
Msa1166990 MtrunA17_Chr2g0326761 36.842 114 68 3 49 160 97 208 3.53e-12 67.0
Msa1166990 MtrunA17_Chr2g0282961 33.813 139 84 3 20 156 124 256 7.14e-12 65.9
Msa1166990 MtrunA17_Chr4g0070181 34.884 129 75 4 34 160 105 226 8.24e-12 65.9
Msa1166990 MtrunA17_Chr2g0301251 34.884 129 75 4 34 160 105 226 1.64e-11 65.1
Msa1166990 MtrunA17_Chr4g0046371 36.937 111 68 2 48 156 136 246 5.66e-11 63.2
Msa1166990 MtrunA17_Chr5g0417281 34.615 104 66 2 45 146 98 201 8.63e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166990 AT5G06250.5 44.599 287 115 8 1 268 1 262 8.79e-70 218
Msa1166990 AT5G06250.2 45.070 284 112 8 1 265 1 259 4.44e-69 216
Msa1166990 AT5G06250.4 45.070 284 112 8 1 265 1 259 4.72e-69 216
Msa1166990 AT5G06250.3 43.902 287 96 7 1 265 1 244 2.75e-65 206
Msa1166990 AT5G06250.1 43.902 287 96 7 1 265 1 244 2.94e-65 206
Msa1166990 AT3G11580.1 51.923 208 80 4 55 248 24 225 2.83e-62 198
Msa1166990 AT2G36080.1 57.711 201 46 6 54 250 32 197 6.26e-62 197
Msa1166990 AT2G36080.3 57.711 201 46 6 54 250 32 197 6.30e-62 196
Msa1166990 AT3G11580.3 51.923 208 80 4 55 248 24 225 1.90e-61 199
Msa1166990 AT2G36080.4 80.357 112 18 1 54 161 32 143 1.82e-57 183
Msa1166990 AT2G36080.2 80.357 112 18 1 54 161 32 143 1.82e-57 183
Msa1166990 AT3G11580.4 73.109 119 20 1 55 161 24 142 3.63e-57 184
Msa1166990 AT3G11580.2 73.109 119 20 1 55 161 24 142 3.63e-57 184
Msa1166990 AT3G11580.5 73.109 119 20 1 55 161 24 142 3.63e-57 184
Msa1166990 AT3G61970.1 71.795 117 29 1 49 161 12 128 8.98e-54 177
Msa1166990 AT2G46870.1 66.929 127 37 3 40 161 14 140 6.99e-50 168
Msa1166990 AT1G01030.2 46.018 226 91 7 55 250 51 275 5.39e-48 164
Msa1166990 AT1G13260.1 68.468 111 33 1 57 165 185 295 8.56e-48 163
Msa1166990 AT1G01030.1 69.369 111 30 2 55 161 51 161 2.30e-46 160
Msa1166990 AT1G68840.2 60.630 127 47 1 56 179 184 310 5.59e-46 159
Msa1166990 AT1G68840.1 60.630 127 47 1 56 179 184 310 5.59e-46 159
Msa1166990 AT3G25730.1 63.063 111 37 1 57 163 180 290 1.09e-44 155
Msa1166990 AT4G01500.1 39.918 243 95 5 52 244 28 269 7.85e-43 150
Msa1166990 AT1G25560.1 57.812 128 41 2 56 174 191 314 3.95e-42 149
Msa1166990 AT1G51120.1 47.368 95 41 1 59 144 177 271 2.18e-24 101
Msa1166990 AT1G50680.1 45.918 98 41 1 59 144 156 253 1.58e-23 99.0
Msa1166990 AT4G32010.1 40.179 112 60 5 59 167 285 392 3.41e-15 76.6
Msa1166990 AT4G32010.2 40.179 112 60 5 59 167 281 388 3.50e-15 76.3
Msa1166990 AT2G30470.1 40.952 105 56 4 59 161 294 394 9.55e-15 75.1
Msa1166990 AT1G77850.2 35.455 110 67 2 53 160 112 219 5.74e-13 69.7
Msa1166990 AT1G77850.1 35.455 110 67 2 53 160 112 219 5.90e-13 69.7
Msa1166990 AT1G35240.1 37.931 116 69 3 60 173 126 240 2.18e-12 67.8
Msa1166990 AT2G28350.1 32.624 141 92 3 28 166 84 223 7.14e-12 66.2
Msa1166990 AT2G28350.2 32.624 141 92 3 28 166 84 223 7.16e-12 66.2
Msa1166990 AT1G35520.1 37.069 116 70 3 60 173 126 240 1.62e-11 65.1
Msa1166990 AT1G34310.1 36.207 116 71 3 60 173 126 240 2.09e-11 64.7
Msa1166990 AT1G34410.1 33.884 121 67 4 60 173 126 240 9.58e-11 62.8

Find 99 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACGTCGCTTGGTGTTAA+TGG 0.127068 7_4:+59149307 None:intergenic
TTGATTGAATCTAGCTAATA+TGG 0.221602 7_4:+59147758 None:intergenic
TAATAATTAAAATTAATTAA+AGG 0.231030 7_4:+59147650 None:intergenic
AGCAATCTGGTGACAAAGTT+TGG 0.259112 7_4:+59147885 None:intergenic
TTAATATTTGCTTGATTGAT+AGG 0.259809 7_4:+59147451 None:intergenic
ATCTTTCTTGTCTTAAATTC+AGG 0.265779 7_4:-59147529 Msa1166990:three_prime_UTR
AATAATTAAAATTAATTAAA+GGG 0.270961 7_4:+59147651 None:intergenic
CTCAATTTATTAGTATATTT+AGG 0.273317 7_4:-59147574 Msa1166990:three_prime_UTR
ATTGAGAAAGGTTCCTTTCA+TGG 0.274144 7_4:+59147591 None:intergenic
TATCTCTCAGCATGTTGTTT+TGG 0.292618 7_4:+59149262 None:intergenic
ATTCAGGAGATGCATGTAAA+TGG 0.299023 7_4:-59147513 Msa1166990:three_prime_UTR
TCTTCTAAGCTTTAGGGTTA+AGG 0.311942 7_4:-59147677 Msa1166990:three_prime_UTR
GGAGGTTCCGGTATTCATAT+TGG 0.328744 7_4:-59149171 Msa1166990:CDS
TCCAGGGTGCTGAGGCTGTT+TGG 0.331988 7_4:-59147965 Msa1166990:CDS
TTAATATTAATATTATTATC+AGG 0.333871 7_4:+59147923 None:intergenic
CAGGTAAGTGTTGGAGGTTC+CGG 0.351251 7_4:-59149183 Msa1166990:CDS
TGTGGTTGTGTTCTGACTTT+GGG 0.369690 7_4:+59148012 None:intergenic
CAAAGCTATGTTCTTACAAA+AGG 0.401403 7_4:-59149139 Msa1166990:CDS
GAAATAGTTCGAGTACTTCC+AGG 0.409986 7_4:-59147982 Msa1166990:CDS
GAGGTTGACGGTGGAGGTGG+TGG 0.410580 7_4:+59147816 None:intergenic
TATTTCTCAAACAAAATTTG+AGG 0.414952 7_4:+59149526 None:intergenic
TTCAACTTCCCTACGTCGCT+TGG 0.425371 7_4:+59149298 None:intergenic
TTGAAGGAGGTTGACGGTGG+AGG 0.432392 7_4:+59147810 None:intergenic
TAATATTTGCTTGATTGATA+GGG 0.433944 7_4:+59147452 None:intergenic
GCAATCTGGTGACAAAGTTT+GGG 0.439412 7_4:+59147886 None:intergenic
AAGGAGGTTGACGGTGGAGG+TGG 0.440000 7_4:+59147813 None:intergenic
TGGAGGTGGTGGTAGAATTG+TGG 0.441638 7_4:+59147827 None:intergenic
TACAAGAAACAACATCACTA+TGG 0.450273 7_4:-59149474 Msa1166990:CDS
GGATGATGATGAGTAGGATA+AGG 0.453506 7_4:+59148893 None:intergenic
GTGTGGTTGTGTTCTGACTT+TGG 0.459825 7_4:+59148011 None:intergenic
AGGATGAGTCAGGTAAGTGT+TGG 0.475422 7_4:-59149192 Msa1166990:CDS
GCTATGTTCTTACAAAAGGT+TGG 0.477263 7_4:-59149135 Msa1166990:CDS
GAGGATTTGAAGGAGGTTGA+CGG 0.478467 7_4:+59147804 None:intergenic
TTTGAGGATTTGAAAGAGAG+AGG 0.480033 7_4:+59149542 None:intergenic
GGAGGTGGTGGTAGAATTGT+GGG 0.483601 7_4:+59147828 None:intergenic
TATTAATATTATTATCAGGT+TGG 0.493103 7_4:+59147927 None:intergenic
TGTAGTACGTGAGTGGTTGA+AGG 0.493128 7_4:+59149588 None:intergenic
TACTGTTCCAATATGAATAC+CGG 0.505382 7_4:+59149164 None:intergenic
TTGAGGATTTGAAAGAGAGA+GGG 0.513453 7_4:+59149543 None:intergenic
CCATCTGTAGTGATGGCAAT+GGG 0.515422 7_4:-59148970 Msa1166990:CDS
GACATATTATAAGAGCAATC+TGG 0.517703 7_4:+59147872 None:intergenic
ATGCGCAGGATAGAGTTCTC+TGG 0.519337 7_4:+59148916 None:intergenic
ATCTCGTGGAGGCGCCGCCA+TGG 0.519364 7_4:-59149028 Msa1166990:CDS
CCCATTGCCATCACTACAGA+TGG 0.522140 7_4:+59148970 None:intergenic
TGTAGTGATGGCAATGGGAA+TGG 0.522719 7_4:-59148965 Msa1166990:CDS
TTGATTTCTTCTGAGTCTAG+TGG 0.523246 7_4:+59149235 None:intergenic
ATGAGTCAGGTAAGTGTTGG+AGG 0.531766 7_4:-59149189 Msa1166990:CDS
TGATTTCTTCTGAGTCTAGT+GGG 0.531823 7_4:+59149236 None:intergenic
ATGTGATGGTGAGGATTTGA+AGG 0.538757 7_4:+59147794 None:intergenic
ATATACTAATAAATTGAGAA+AGG 0.542638 7_4:+59147579 None:intergenic
TGGGAATAGCACTGTTCCTG+TGG 0.547485 7_4:-59148945 Msa1166990:CDS
CCATTAACACCAAGCGACGT+AGG 0.548021 7_4:-59149307 Msa1166990:CDS
GAGAGGGTGTGAGAGAGAAG+TGG 0.554099 7_4:+59149559 None:intergenic
CATCCCTTGTCATACCATGC+AGG 0.555918 7_4:-59148875 Msa1166990:intron
AGCAGATCCATCTGTAGTGA+TGG 0.561002 7_4:-59148977 Msa1166990:CDS
CATTAACACCAAGCGACGTA+GGG 0.563833 7_4:-59149306 Msa1166990:CDS
ATAGCACTGTTCCTGTGGGG+TGG 0.568873 7_4:-59148940 Msa1166990:CDS
AAGAGAATCTAGTTAGGAGA+GGG 0.569754 7_4:+59147708 None:intergenic
TCCAAACAGCCTCAGCACCC+TGG 0.570047 7_4:+59147964 None:intergenic
AGTTCTCTGGACCACCCCAC+AGG 0.570942 7_4:+59148929 None:intergenic
AAAGAGAATCTAGTTAGGAG+AGG 0.571594 7_4:+59147707 None:intergenic
AAAGATAAACGTCTTGATGC+TGG 0.575473 7_4:-59149100 Msa1166990:CDS
ATGTTGTTTCTTGTATTGTG+TGG 0.576167 7_4:+59149482 None:intergenic
GTAGTGATGGCAATGGGAAT+GGG 0.579455 7_4:-59148964 Msa1166990:CDS
GATTTGAAGGAGGTTGACGG+TGG 0.580120 7_4:+59147807 None:intergenic
TGAGTAGGATAAGGATGCGC+AGG 0.580460 7_4:+59148902 None:intergenic
ATGGATCTGCTAACATGAGC+CGG 0.583256 7_4:+59148989 None:intergenic
CGAGTACTTCCAGGGTGCTG+AGG 0.583570 7_4:-59147973 Msa1166990:CDS
TGGTAGTAACTCTACTCCAC+CGG 0.584083 7_4:-59149008 Msa1166990:CDS
GACAAGGGATGATGATGAGT+AGG 0.585445 7_4:+59148887 None:intergenic
CTCAACGGTTGTTTATCTCG+TGG 0.587033 7_4:-59149042 Msa1166990:CDS
GAGGCTGTTTGGAGTGAACA+TGG 0.594809 7_4:-59147954 Msa1166990:CDS
TCCATCTGTAGTGATGGCAA+TGG 0.596273 7_4:-59148971 Msa1166990:CDS
GGGAATAGCACTGTTCCTGT+GGG 0.597826 7_4:-59148944 Msa1166990:CDS
CGAACTATTTCCACAAGGTG+TGG 0.598711 7_4:+59147994 None:intergenic
AGCTGAACTAGAAGATGATG+TGG 0.605647 7_4:-59149404 Msa1166990:CDS
ATGATCAACTGATCCATGAA+AGG 0.608959 7_4:-59147604 Msa1166990:three_prime_UTR
AAGAAACAACATCACTATGG+TGG 0.609594 7_4:-59149471 Msa1166990:CDS
CTAGACTCAGAAGAAATCAA+AGG 0.611927 7_4:-59149232 Msa1166990:CDS
GTTCACGTTGAAGATTGTAG+AGG 0.616609 7_4:-59147552 Msa1166990:three_prime_UTR
AACGGTTGTTTATCTCGTGG+AGG 0.625722 7_4:-59149039 Msa1166990:CDS
GTTTGTTTGTAGTACGTGAG+TGG 0.627281 7_4:+59149581 None:intergenic
CAGAACACAACCACACCTTG+TGG 0.630986 7_4:-59148004 Msa1166990:CDS
GTTGTTGACGTAGCATGTGA+TGG 0.636988 7_4:+59147780 None:intergenic
AAAACCTGCATGGTATGACA+AGG 0.637700 7_4:+59148871 None:intergenic
TGATGGTGAGGATTTGAAGG+AGG 0.642677 7_4:+59147797 None:intergenic
AAATAGTTCGAGTACTTCCA+GGG 0.668571 7_4:-59147981 Msa1166990:CDS
GTTGTAATGTGACAGGTGAA+GGG 0.678694 7_4:-59148036 Msa1166990:intron
TGACGTAGCATGTGATGGTG+AGG 0.679050 7_4:+59147785 None:intergenic
AAACCTGCATGGTATGACAA+GGG 0.685749 7_4:+59148872 None:intergenic
CACGAGATAAACAACCGTTG+AGG 0.688403 7_4:+59149043 None:intergenic
GACACCGTGTACATCCTCAA+CGG 0.690188 7_4:-59149057 Msa1166990:CDS
TATAATATGTCATCAACACA+AGG 0.697764 7_4:-59147860 Msa1166990:CDS
ACAACCGTTGAGGATGTACA+CGG 0.701448 7_4:+59149053 None:intergenic
GATCTGCTAACATGAGCCGG+TGG 0.708271 7_4:+59148992 None:intergenic
GGAATAGCACTGTTCCTGTG+GGG 0.714296 7_4:-59148943 Msa1166990:CDS
GTGGAGTAGAGTTACTACCA+TGG 0.729540 7_4:+59149011 None:intergenic
GTACTCGAACTATTTCCACA+AGG 0.735032 7_4:+59147989 None:intergenic
GAGTAGAGTTACTACCATGG+CGG 0.790463 7_4:+59149014 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAAAATTAATTAAA+GGG + chr7_4:59149416-59149435 None:intergenic 0.0%
!! TAATAATTAAAATTAATTAA+AGG + chr7_4:59149417-59149436 None:intergenic 0.0%
!! AATAATTAAAATTAATTAAA+GGG + chr7_4:59149416-59149435 None:intergenic 0.0%
!! TAATAATTAAAATTAATTAA+AGG + chr7_4:59149417-59149436 None:intergenic 0.0%
!!! ATATTCAATATTTTACTTAG+AGG - chr7_4:59148266-59148285 Msa1166990:intron 15.0%
!! ATCAAAACCATAAATAAATA+CGG + chr7_4:59148965-59148984 None:intergenic 15.0%
!! TATTAATATTATTATCAGGT+TGG + chr7_4:59149140-59149159 None:intergenic 15.0%
!! ATATACTAATAAATTGAGAA+AGG + chr7_4:59149488-59149507 None:intergenic 15.0%
!! CTCAATTTATTAGTATATTT+AGG - chr7_4:59149490-59149509 Msa1166990:CDS 15.0%
!!! ATATTCAATATTTTACTTAG+AGG - chr7_4:59148266-59148285 Msa1166990:intron 15.0%
!! ATCAAAACCATAAATAAATA+CGG + chr7_4:59148965-59148984 None:intergenic 15.0%
!! TATTAATATTATTATCAGGT+TGG + chr7_4:59149140-59149159 None:intergenic 15.0%
!! ATATACTAATAAATTGAGAA+AGG + chr7_4:59149488-59149507 None:intergenic 15.0%
!! CTCAATTTATTAGTATATTT+AGG - chr7_4:59149490-59149509 Msa1166990:CDS 15.0%
!! TATTTCTCAAACAAAATTTG+AGG + chr7_4:59147541-59147560 None:intergenic 20.0%
!! ATGTATATAAGAGATTATAG+TGG + chr7_4:59148226-59148245 None:intergenic 20.0%
!! ATTCTATTACAAATTTCAGA+TGG - chr7_4:59148623-59148642 Msa1166990:intron 20.0%
!! AAATTAAATTCAACAAAAGC+AGG + chr7_4:59148829-59148848 None:intergenic 20.0%
!! TTGAATTGAAAATGAATGTA+TGG - chr7_4:59148993-59149012 Msa1166990:CDS 20.0%
!! TGAATTGAAAATGAATGTAT+GGG - chr7_4:59148994-59149013 Msa1166990:CDS 20.0%
!! AAAAAAAAGAGAATCTAGTT+AGG + chr7_4:59149365-59149384 None:intergenic 20.0%
!!! TTTTTTTTCTTCTAAGCTTT+AGG - chr7_4:59149380-59149399 Msa1166990:CDS 20.0%
!!! TTTTTTTCTTCTAAGCTTTA+GGG - chr7_4:59149381-59149400 Msa1166990:CDS 20.0%
!! TATTTCTCAAACAAAATTTG+AGG + chr7_4:59147541-59147560 None:intergenic 20.0%
!! ATGTATATAAGAGATTATAG+TGG + chr7_4:59148226-59148245 None:intergenic 20.0%
!! ATTCTATTACAAATTTCAGA+TGG - chr7_4:59148623-59148642 Msa1166990:intron 20.0%
!! AAATTAAATTCAACAAAAGC+AGG + chr7_4:59148829-59148848 None:intergenic 20.0%
!! TTGAATTGAAAATGAATGTA+TGG - chr7_4:59148993-59149012 Msa1166990:CDS 20.0%
!! TGAATTGAAAATGAATGTAT+GGG - chr7_4:59148994-59149013 Msa1166990:CDS 20.0%
!! AAAAAAAAGAGAATCTAGTT+AGG + chr7_4:59149365-59149384 None:intergenic 20.0%
!!! TTTTTTTTCTTCTAAGCTTT+AGG - chr7_4:59149380-59149399 Msa1166990:CDS 20.0%
!!! TTTTTTTCTTCTAAGCTTTA+GGG - chr7_4:59149381-59149400 Msa1166990:CDS 20.0%
!!! TATAAGAGATTATAGTGGAT+AGG + chr7_4:59148221-59148240 None:intergenic 25.0%
! TATTAGACGATTGTTTATCA+CGG + chr7_4:59148326-59148345 None:intergenic 25.0%
! ATTGTTTAGACGAAAAGTTT+AGG + chr7_4:59148431-59148450 None:intergenic 25.0%
! TAGTAATTTGAATTTCCCAT+GGG - chr7_4:59148582-59148601 Msa1166990:intron 25.0%
! TATTACAAATTTCAGATGGA+TGG - chr7_4:59148627-59148646 Msa1166990:intron 25.0%
!! TTAACGTTTTCAACGTTAAA+AGG - chr7_4:59148867-59148886 Msa1166990:intron 25.0%
!! GCATTTTCCGTATTTATTTA+TGG - chr7_4:59148955-59148974 Msa1166990:CDS 25.0%
! TATAATATGTCATCAACACA+AGG - chr7_4:59149204-59149223 Msa1166990:CDS 25.0%
! TTGATTGAATCTAGCTAATA+TGG + chr7_4:59149309-59149328 None:intergenic 25.0%
! ATCTTTCTTGTCTTAAATTC+AGG - chr7_4:59149535-59149554 Msa1166990:five_prime_UTR 25.0%
!!! TATAAGAGATTATAGTGGAT+AGG + chr7_4:59148221-59148240 None:intergenic 25.0%
! TATTAGACGATTGTTTATCA+CGG + chr7_4:59148326-59148345 None:intergenic 25.0%
! ATTGTTTAGACGAAAAGTTT+AGG + chr7_4:59148431-59148450 None:intergenic 25.0%
! TAGTAATTTGAATTTCCCAT+GGG - chr7_4:59148582-59148601 Msa1166990:intron 25.0%
! TATTACAAATTTCAGATGGA+TGG - chr7_4:59148627-59148646 Msa1166990:intron 25.0%
!! TTAACGTTTTCAACGTTAAA+AGG - chr7_4:59148867-59148886 Msa1166990:intron 25.0%
!! GCATTTTCCGTATTTATTTA+TGG - chr7_4:59148955-59148974 Msa1166990:CDS 25.0%
! TATAATATGTCATCAACACA+AGG - chr7_4:59149204-59149223 Msa1166990:CDS 25.0%
! TTGATTGAATCTAGCTAATA+TGG + chr7_4:59149309-59149328 None:intergenic 25.0%
! ATCTTTCTTGTCTTAAATTC+AGG - chr7_4:59149535-59149554 Msa1166990:five_prime_UTR 25.0%
!! ATGTTGTTTCTTGTATTGTG+TGG + chr7_4:59147585-59147604 None:intergenic 30.0%
TACAAGAAACAACATCACTA+TGG - chr7_4:59147590-59147609 Msa1166990:three_prime_UTR 30.0%
!!! AGGTTTGTTACTAAGTTTTG+AGG - chr7_4:59147852-59147871 Msa1166990:CDS 30.0%
TACTGTTCCAATATGAATAC+CGG + chr7_4:59147903-59147922 None:intergenic 30.0%
CAAAGCTATGTTCTTACAAA+AGG - chr7_4:59147925-59147944 Msa1166990:CDS 30.0%
TTAGACGAAAAGTTTAGGAA+GGG + chr7_4:59148426-59148445 None:intergenic 30.0%
TTTAGACGAAAAGTTTAGGA+AGG + chr7_4:59148427-59148446 None:intergenic 30.0%
CTAGTAATTTGAATTTCCCA+TGG - chr7_4:59148581-59148600 Msa1166990:intron 30.0%
CTGACAATATATATACCCAT+GGG + chr7_4:59148600-59148619 None:intergenic 30.0%
ACTGACAATATATATACCCA+TGG + chr7_4:59148601-59148620 None:intergenic 30.0%
AAAACATACATGCAACACAA+TGG + chr7_4:59148654-59148673 None:intergenic 30.0%
GACATATTATAAGAGCAATC+TGG + chr7_4:59149195-59149214 None:intergenic 30.0%
!! ATGTTGTTTCTTGTATTGTG+TGG + chr7_4:59147585-59147604 None:intergenic 30.0%
TACAAGAAACAACATCACTA+TGG - chr7_4:59147590-59147609 Msa1166990:three_prime_UTR 30.0%
!!! AGGTTTGTTACTAAGTTTTG+AGG - chr7_4:59147852-59147871 Msa1166990:CDS 30.0%
TACTGTTCCAATATGAATAC+CGG + chr7_4:59147903-59147922 None:intergenic 30.0%
CAAAGCTATGTTCTTACAAA+AGG - chr7_4:59147925-59147944 Msa1166990:CDS 30.0%
TTAGACGAAAAGTTTAGGAA+GGG + chr7_4:59148426-59148445 None:intergenic 30.0%
TTTAGACGAAAAGTTTAGGA+AGG + chr7_4:59148427-59148446 None:intergenic 30.0%
CTAGTAATTTGAATTTCCCA+TGG - chr7_4:59148581-59148600 Msa1166990:intron 30.0%
CTGACAATATATATACCCAT+GGG + chr7_4:59148600-59148619 None:intergenic 30.0%
ACTGACAATATATATACCCA+TGG + chr7_4:59148601-59148620 None:intergenic 30.0%
AAAACATACATGCAACACAA+TGG + chr7_4:59148654-59148673 None:intergenic 30.0%
GACATATTATAAGAGCAATC+TGG + chr7_4:59149195-59149214 None:intergenic 30.0%
TTGAGGATTTGAAAGAGAGA+GGG + chr7_4:59147524-59147543 None:intergenic 35.0%
TTTGAGGATTTGAAAGAGAG+AGG + chr7_4:59147525-59147544 None:intergenic 35.0%
AAGAAACAACATCACTATGG+TGG - chr7_4:59147593-59147612 Msa1166990:three_prime_UTR 35.0%
!!! GTTGTTTTGGAATAACGAGT+CGG + chr7_4:59147792-59147811 None:intergenic 35.0%
!! TATCTCTCAGCATGTTGTTT+TGG + chr7_4:59147805-59147824 None:intergenic 35.0%
TGATTTCTTCTGAGTCTAGT+GGG + chr7_4:59147831-59147850 None:intergenic 35.0%
TTGATTTCTTCTGAGTCTAG+TGG + chr7_4:59147832-59147851 None:intergenic 35.0%
CTAGACTCAGAAGAAATCAA+AGG - chr7_4:59147832-59147851 Msa1166990:CDS 35.0%
GCTATGTTCTTACAAAAGGT+TGG - chr7_4:59147929-59147948 Msa1166990:CDS 35.0%
AAAGATAAACGTCTTGATGC+TGG - chr7_4:59147964-59147983 Msa1166990:CDS 35.0%
AAGGGTAACTTCCAGTTATT+TGG - chr7_4:59148713-59148732 Msa1166990:intron 35.0%
AGGGTAACTTCCAGTTATTT+GGG - chr7_4:59148714-59148733 Msa1166990:intron 35.0%
ATAATGTGACCTAAAGTGTG+TGG - chr7_4:59148786-59148805 Msa1166990:intron 35.0%
TTTCAACGTTAAAAGGTTGC+AGG - chr7_4:59148874-59148893 Msa1166990:intron 35.0%
! TGTTTGTTTCTTTCGCTTGT+TGG - chr7_4:59148908-59148927 Msa1166990:CDS 35.0%
! GTTTGTTTCTTTCGCTTGTT+GGG - chr7_4:59148909-59148928 Msa1166990:CDS 35.0%
AAATAGTTCGAGTACTTCCA+GGG - chr7_4:59149083-59149102 Msa1166990:CDS 35.0%
AAGAGAATCTAGTTAGGAGA+GGG + chr7_4:59149359-59149378 None:intergenic 35.0%
AAAGAGAATCTAGTTAGGAG+AGG + chr7_4:59149360-59149379 None:intergenic 35.0%
!! TCTTCTAAGCTTTAGGGTTA+AGG - chr7_4:59149387-59149406 Msa1166990:CDS 35.0%
ATGATCAACTGATCCATGAA+AGG - chr7_4:59149460-59149479 Msa1166990:CDS 35.0%
ATTGAGAAAGGTTCCTTTCA+TGG + chr7_4:59149476-59149495 None:intergenic 35.0%
ATTCAGGAGATGCATGTAAA+TGG - chr7_4:59149551-59149570 Msa1166990:five_prime_UTR 35.0%
TTGAGGATTTGAAAGAGAGA+GGG + chr7_4:59147524-59147543 None:intergenic 35.0%
TTTGAGGATTTGAAAGAGAG+AGG + chr7_4:59147525-59147544 None:intergenic 35.0%
AAGAAACAACATCACTATGG+TGG - chr7_4:59147593-59147612 Msa1166990:three_prime_UTR 35.0%
!!! GTTGTTTTGGAATAACGAGT+CGG + chr7_4:59147792-59147811 None:intergenic 35.0%
!! TATCTCTCAGCATGTTGTTT+TGG + chr7_4:59147805-59147824 None:intergenic 35.0%
TGATTTCTTCTGAGTCTAGT+GGG + chr7_4:59147831-59147850 None:intergenic 35.0%
TTGATTTCTTCTGAGTCTAG+TGG + chr7_4:59147832-59147851 None:intergenic 35.0%
CTAGACTCAGAAGAAATCAA+AGG - chr7_4:59147832-59147851 Msa1166990:CDS 35.0%
GCTATGTTCTTACAAAAGGT+TGG - chr7_4:59147929-59147948 Msa1166990:CDS 35.0%
AAAGATAAACGTCTTGATGC+TGG - chr7_4:59147964-59147983 Msa1166990:CDS 35.0%
AAGGGTAACTTCCAGTTATT+TGG - chr7_4:59148713-59148732 Msa1166990:intron 35.0%
AGGGTAACTTCCAGTTATTT+GGG - chr7_4:59148714-59148733 Msa1166990:intron 35.0%
ATAATGTGACCTAAAGTGTG+TGG - chr7_4:59148786-59148805 Msa1166990:intron 35.0%
TTTCAACGTTAAAAGGTTGC+AGG - chr7_4:59148874-59148893 Msa1166990:intron 35.0%
! TGTTTGTTTCTTTCGCTTGT+TGG - chr7_4:59148908-59148927 Msa1166990:CDS 35.0%
! GTTTGTTTCTTTCGCTTGTT+GGG - chr7_4:59148909-59148928 Msa1166990:CDS 35.0%
AAATAGTTCGAGTACTTCCA+GGG - chr7_4:59149083-59149102 Msa1166990:CDS 35.0%
AAGAGAATCTAGTTAGGAGA+GGG + chr7_4:59149359-59149378 None:intergenic 35.0%
AAAGAGAATCTAGTTAGGAG+AGG + chr7_4:59149360-59149379 None:intergenic 35.0%
!! TCTTCTAAGCTTTAGGGTTA+AGG - chr7_4:59149387-59149406 Msa1166990:CDS 35.0%
ATGATCAACTGATCCATGAA+AGG - chr7_4:59149460-59149479 Msa1166990:CDS 35.0%
ATTGAGAAAGGTTCCTTTCA+TGG + chr7_4:59149476-59149495 None:intergenic 35.0%
ATTCAGGAGATGCATGTAAA+TGG - chr7_4:59149551-59149570 Msa1166990:five_prime_UTR 35.0%
GTTTGTTTGTAGTACGTGAG+TGG + chr7_4:59147486-59147505 None:intergenic 40.0%
AGCTGAACTAGAAGATGATG+TGG - chr7_4:59147660-59147679 Msa1166990:three_prime_UTR 40.0%
!!! CTAAGTTTTGAGGATGAGTC+AGG - chr7_4:59147862-59147881 Msa1166990:CDS 40.0%
! GGATGATGATGAGTAGGATA+AGG + chr7_4:59148174-59148193 None:intergenic 40.0%
AAACCTGCATGGTATGACAA+GGG + chr7_4:59148195-59148214 None:intergenic 40.0%
AAAACCTGCATGGTATGACA+AGG + chr7_4:59148196-59148215 None:intergenic 40.0%
TGGATAGGTAAAAACCTGCA+TGG + chr7_4:59148206-59148225 None:intergenic 40.0%
CTAATTACTCGTGCACTATG+TGG + chr7_4:59148480-59148499 None:intergenic 40.0%
! ACTTCCAGTTATTTGGGACT+TGG - chr7_4:59148720-59148739 Msa1166990:intron 40.0%
TGTTGTAATGTGACAGGTGA+AGG - chr7_4:59149027-59149046 Msa1166990:CDS 40.0%
GTTGTAATGTGACAGGTGAA+GGG - chr7_4:59149028-59149047 Msa1166990:CDS 40.0%
TGTGGTTGTGTTCTGACTTT+GGG + chr7_4:59149055-59149074 None:intergenic 40.0%
GTACTCGAACTATTTCCACA+AGG + chr7_4:59149078-59149097 None:intergenic 40.0%
GAAATAGTTCGAGTACTTCC+AGG - chr7_4:59149082-59149101 Msa1166990:CDS 40.0%
GCAATCTGGTGACAAAGTTT+GGG + chr7_4:59149181-59149200 None:intergenic 40.0%
AGCAATCTGGTGACAAAGTT+TGG + chr7_4:59149182-59149201 None:intergenic 40.0%
! ATGTGATGGTGAGGATTTGA+AGG + chr7_4:59149273-59149292 None:intergenic 40.0%
GTTCACGTTGAAGATTGTAG+AGG - chr7_4:59149512-59149531 Msa1166990:exon 40.0%
GTTTGTTTGTAGTACGTGAG+TGG + chr7_4:59147486-59147505 None:intergenic 40.0%
AGCTGAACTAGAAGATGATG+TGG - chr7_4:59147660-59147679 Msa1166990:three_prime_UTR 40.0%
!!! CTAAGTTTTGAGGATGAGTC+AGG - chr7_4:59147862-59147881 Msa1166990:CDS 40.0%
! GGATGATGATGAGTAGGATA+AGG + chr7_4:59148174-59148193 None:intergenic 40.0%
AAACCTGCATGGTATGACAA+GGG + chr7_4:59148195-59148214 None:intergenic 40.0%
AAAACCTGCATGGTATGACA+AGG + chr7_4:59148196-59148215 None:intergenic 40.0%
TGGATAGGTAAAAACCTGCA+TGG + chr7_4:59148206-59148225 None:intergenic 40.0%
CTAATTACTCGTGCACTATG+TGG + chr7_4:59148480-59148499 None:intergenic 40.0%
! ACTTCCAGTTATTTGGGACT+TGG - chr7_4:59148720-59148739 Msa1166990:intron 40.0%
TGTTGTAATGTGACAGGTGA+AGG - chr7_4:59149027-59149046 Msa1166990:CDS 40.0%
GTTGTAATGTGACAGGTGAA+GGG - chr7_4:59149028-59149047 Msa1166990:CDS 40.0%
TGTGGTTGTGTTCTGACTTT+GGG + chr7_4:59149055-59149074 None:intergenic 40.0%
GTACTCGAACTATTTCCACA+AGG + chr7_4:59149078-59149097 None:intergenic 40.0%
GAAATAGTTCGAGTACTTCC+AGG - chr7_4:59149082-59149101 Msa1166990:CDS 40.0%
GCAATCTGGTGACAAAGTTT+GGG + chr7_4:59149181-59149200 None:intergenic 40.0%
AGCAATCTGGTGACAAAGTT+TGG + chr7_4:59149182-59149201 None:intergenic 40.0%
! ATGTGATGGTGAGGATTTGA+AGG + chr7_4:59149273-59149292 None:intergenic 40.0%
GTTCACGTTGAAGATTGTAG+AGG - chr7_4:59149512-59149531 Msa1166990:exon 40.0%
TGTAGTACGTGAGTGGTTGA+AGG + chr7_4:59147479-59147498 None:intergenic 45.0%
CATTAACACCAAGCGACGTA+GGG - chr7_4:59147758-59147777 Msa1166990:exon 45.0%
AGGATGAGTCAGGTAAGTGT+TGG - chr7_4:59147872-59147891 Msa1166990:CDS 45.0%
!! ATGAGTCAGGTAAGTGTTGG+AGG - chr7_4:59147875-59147894 Msa1166990:CDS 45.0%
GGAGGTTCCGGTATTCATAT+TGG - chr7_4:59147893-59147912 Msa1166990:CDS 45.0%
ACAACCGTTGAGGATGTACA+CGG + chr7_4:59148014-59148033 None:intergenic 45.0%
CACGAGATAAACAACCGTTG+AGG + chr7_4:59148024-59148043 None:intergenic 45.0%
CTCAACGGTTGTTTATCTCG+TGG - chr7_4:59148022-59148041 Msa1166990:CDS 45.0%
AACGGTTGTTTATCTCGTGG+AGG - chr7_4:59148025-59148044 Msa1166990:intron 45.0%
GAGTAGAGTTACTACCATGG+CGG + chr7_4:59148053-59148072 None:intergenic 45.0%
GTGGAGTAGAGTTACTACCA+TGG + chr7_4:59148056-59148075 None:intergenic 45.0%
TGGTAGTAACTCTACTCCAC+CGG - chr7_4:59148056-59148075 Msa1166990:intron 45.0%
ATGGATCTGCTAACATGAGC+CGG + chr7_4:59148078-59148097 None:intergenic 45.0%
AGCAGATCCATCTGTAGTGA+TGG - chr7_4:59148087-59148106 Msa1166990:intron 45.0%
TCCATCTGTAGTGATGGCAA+TGG - chr7_4:59148093-59148112 Msa1166990:intron 45.0%
CCATCTGTAGTGATGGCAAT+GGG - chr7_4:59148094-59148113 Msa1166990:intron 45.0%
TGTAGTGATGGCAATGGGAA+TGG - chr7_4:59148099-59148118 Msa1166990:intron 45.0%
GTAGTGATGGCAATGGGAAT+GGG - chr7_4:59148100-59148119 Msa1166990:intron 45.0%
! GACAAGGGATGATGATGAGT+AGG + chr7_4:59148180-59148199 None:intergenic 45.0%
! TCCAGTTATTTGGGACTTGG+AGG - chr7_4:59148723-59148742 Msa1166990:intron 45.0%
TCCTCCAAGTCCCAAATAAC+TGG + chr7_4:59148727-59148746 None:intergenic 45.0%
! ATTTGGGACTTGGAGGAATG+AGG - chr7_4:59148730-59148749 Msa1166990:intron 45.0%
TGCACGTGTTGTAATGTGAC+AGG - chr7_4:59149021-59149040 Msa1166990:CDS 45.0%
GTGTGGTTGTGTTCTGACTT+TGG + chr7_4:59149056-59149075 None:intergenic 45.0%
CGAACTATTTCCACAAGGTG+TGG + chr7_4:59149073-59149092 None:intergenic 45.0%
GAGGATTTGAAGGAGGTTGA+CGG + chr7_4:59149263-59149282 None:intergenic 45.0%
! TGATGGTGAGGATTTGAAGG+AGG + chr7_4:59149270-59149289 None:intergenic 45.0%
GTTGTTGACGTAGCATGTGA+TGG + chr7_4:59149287-59149306 None:intergenic 45.0%
TGTAGTACGTGAGTGGTTGA+AGG + chr7_4:59147479-59147498 None:intergenic 45.0%
CATTAACACCAAGCGACGTA+GGG - chr7_4:59147758-59147777 Msa1166990:exon 45.0%
AGGATGAGTCAGGTAAGTGT+TGG - chr7_4:59147872-59147891 Msa1166990:CDS 45.0%
!! ATGAGTCAGGTAAGTGTTGG+AGG - chr7_4:59147875-59147894 Msa1166990:CDS 45.0%
GGAGGTTCCGGTATTCATAT+TGG - chr7_4:59147893-59147912 Msa1166990:CDS 45.0%
ACAACCGTTGAGGATGTACA+CGG + chr7_4:59148014-59148033 None:intergenic 45.0%
CACGAGATAAACAACCGTTG+AGG + chr7_4:59148024-59148043 None:intergenic 45.0%
CTCAACGGTTGTTTATCTCG+TGG - chr7_4:59148022-59148041 Msa1166990:CDS 45.0%
AACGGTTGTTTATCTCGTGG+AGG - chr7_4:59148025-59148044 Msa1166990:intron 45.0%
GAGTAGAGTTACTACCATGG+CGG + chr7_4:59148053-59148072 None:intergenic 45.0%
GTGGAGTAGAGTTACTACCA+TGG + chr7_4:59148056-59148075 None:intergenic 45.0%
TGGTAGTAACTCTACTCCAC+CGG - chr7_4:59148056-59148075 Msa1166990:intron 45.0%
ATGGATCTGCTAACATGAGC+CGG + chr7_4:59148078-59148097 None:intergenic 45.0%
AGCAGATCCATCTGTAGTGA+TGG - chr7_4:59148087-59148106 Msa1166990:intron 45.0%
TCCATCTGTAGTGATGGCAA+TGG - chr7_4:59148093-59148112 Msa1166990:intron 45.0%
CCATCTGTAGTGATGGCAAT+GGG - chr7_4:59148094-59148113 Msa1166990:intron 45.0%
TGTAGTGATGGCAATGGGAA+TGG - chr7_4:59148099-59148118 Msa1166990:intron 45.0%
GTAGTGATGGCAATGGGAAT+GGG - chr7_4:59148100-59148119 Msa1166990:intron 45.0%
! GACAAGGGATGATGATGAGT+AGG + chr7_4:59148180-59148199 None:intergenic 45.0%
! TCCAGTTATTTGGGACTTGG+AGG - chr7_4:59148723-59148742 Msa1166990:intron 45.0%
TCCTCCAAGTCCCAAATAAC+TGG + chr7_4:59148727-59148746 None:intergenic 45.0%
! ATTTGGGACTTGGAGGAATG+AGG - chr7_4:59148730-59148749 Msa1166990:intron 45.0%
TGCACGTGTTGTAATGTGAC+AGG - chr7_4:59149021-59149040 Msa1166990:CDS 45.0%
GTGTGGTTGTGTTCTGACTT+TGG + chr7_4:59149056-59149075 None:intergenic 45.0%
CGAACTATTTCCACAAGGTG+TGG + chr7_4:59149073-59149092 None:intergenic 45.0%
GAGGATTTGAAGGAGGTTGA+CGG + chr7_4:59149263-59149282 None:intergenic 45.0%
! TGATGGTGAGGATTTGAAGG+AGG + chr7_4:59149270-59149289 None:intergenic 45.0%
GTTGTTGACGTAGCATGTGA+TGG + chr7_4:59149287-59149306 None:intergenic 45.0%
!!! TATTTTATTCTTTTAAATAA+AGG - chr7_4:59148694-59148713 Msa1166990:intron 5.0%
!!! ATTTTATTCTTTTAAATAAA+GGG - chr7_4:59148695-59148714 Msa1166990:intron 5.0%
!! TTAATATTAATATTATTATC+AGG + chr7_4:59149144-59149163 None:intergenic 5.0%
!!! TATTTTATTCTTTTAAATAA+AGG - chr7_4:59148694-59148713 Msa1166990:intron 5.0%
!!! ATTTTATTCTTTTAAATAAA+GGG - chr7_4:59148695-59148714 Msa1166990:intron 5.0%
!! TTAATATTAATATTATTATC+AGG + chr7_4:59149144-59149163 None:intergenic 5.0%
!! CCTACGTCGCTTGGTGTTAA+TGG + chr7_4:59147760-59147779 None:intergenic 50.0%
CCATTAACACCAAGCGACGT+AGG - chr7_4:59147757-59147776 Msa1166990:exon 50.0%
TTCAACTTCCCTACGTCGCT+TGG + chr7_4:59147769-59147788 None:intergenic 50.0%
!! CAGGTAAGTGTTGGAGGTTC+CGG - chr7_4:59147881-59147900 Msa1166990:CDS 50.0%
GACACCGTGTACATCCTCAA+CGG - chr7_4:59148007-59148026 Msa1166990:CDS 50.0%
CCCATTGCCATCACTACAGA+TGG + chr7_4:59148097-59148116 None:intergenic 50.0%
TGGGAATAGCACTGTTCCTG+TGG - chr7_4:59148119-59148138 Msa1166990:intron 50.0%
GGGAATAGCACTGTTCCTGT+GGG - chr7_4:59148120-59148139 Msa1166990:intron 50.0%
GGAATAGCACTGTTCCTGTG+GGG - chr7_4:59148121-59148140 Msa1166990:intron 50.0%
ATGCGCAGGATAGAGTTCTC+TGG + chr7_4:59148151-59148170 None:intergenic 50.0%
TGAGTAGGATAAGGATGCGC+AGG + chr7_4:59148165-59148184 None:intergenic 50.0%
CATCCCTTGTCATACCATGC+AGG - chr7_4:59148189-59148208 Msa1166990:intron 50.0%
CAGAACACAACCACACCTTG+TGG - chr7_4:59149060-59149079 Msa1166990:CDS 50.0%
! GAGGCTGTTTGGAGTGAACA+TGG - chr7_4:59149110-59149129 Msa1166990:CDS 50.0%
! GGAGGTGGTGGTAGAATTGT+GGG + chr7_4:59149239-59149258 None:intergenic 50.0%
! TGGAGGTGGTGGTAGAATTG+TGG + chr7_4:59149240-59149259 None:intergenic 50.0%
GATTTGAAGGAGGTTGACGG+TGG + chr7_4:59149260-59149279 None:intergenic 50.0%
! TGACGTAGCATGTGATGGTG+AGG + chr7_4:59149282-59149301 None:intergenic 50.0%
!! CCTACGTCGCTTGGTGTTAA+TGG + chr7_4:59147760-59147779 None:intergenic 50.0%
CCATTAACACCAAGCGACGT+AGG - chr7_4:59147757-59147776 Msa1166990:exon 50.0%
TTCAACTTCCCTACGTCGCT+TGG + chr7_4:59147769-59147788 None:intergenic 50.0%
!! CAGGTAAGTGTTGGAGGTTC+CGG - chr7_4:59147881-59147900 Msa1166990:CDS 50.0%
GACACCGTGTACATCCTCAA+CGG - chr7_4:59148007-59148026 Msa1166990:CDS 50.0%
CCCATTGCCATCACTACAGA+TGG + chr7_4:59148097-59148116 None:intergenic 50.0%
TGGGAATAGCACTGTTCCTG+TGG - chr7_4:59148119-59148138 Msa1166990:intron 50.0%
GGGAATAGCACTGTTCCTGT+GGG - chr7_4:59148120-59148139 Msa1166990:intron 50.0%
GGAATAGCACTGTTCCTGTG+GGG - chr7_4:59148121-59148140 Msa1166990:intron 50.0%
ATGCGCAGGATAGAGTTCTC+TGG + chr7_4:59148151-59148170 None:intergenic 50.0%
TGAGTAGGATAAGGATGCGC+AGG + chr7_4:59148165-59148184 None:intergenic 50.0%
CATCCCTTGTCATACCATGC+AGG - chr7_4:59148189-59148208 Msa1166990:intron 50.0%
CAGAACACAACCACACCTTG+TGG - chr7_4:59149060-59149079 Msa1166990:CDS 50.0%
! GAGGCTGTTTGGAGTGAACA+TGG - chr7_4:59149110-59149129 Msa1166990:CDS 50.0%
! GGAGGTGGTGGTAGAATTGT+GGG + chr7_4:59149239-59149258 None:intergenic 50.0%
! TGGAGGTGGTGGTAGAATTG+TGG + chr7_4:59149240-59149259 None:intergenic 50.0%
GATTTGAAGGAGGTTGACGG+TGG + chr7_4:59149260-59149279 None:intergenic 50.0%
! TGACGTAGCATGTGATGGTG+AGG + chr7_4:59149282-59149301 None:intergenic 50.0%
! GAGAGGGTGTGAGAGAGAAG+TGG + chr7_4:59147508-59147527 None:intergenic 55.0%
GATCTGCTAACATGAGCCGG+TGG + chr7_4:59148075-59148094 None:intergenic 55.0%
ATAGCACTGTTCCTGTGGGG+TGG - chr7_4:59148124-59148143 Msa1166990:intron 55.0%
GGCTTCACGCCACACACTTT+AGG + chr7_4:59148798-59148817 None:intergenic 55.0%
TTGAAGGAGGTTGACGGTGG+AGG + chr7_4:59149257-59149276 None:intergenic 55.0%
! GAGAGGGTGTGAGAGAGAAG+TGG + chr7_4:59147508-59147527 None:intergenic 55.0%
GATCTGCTAACATGAGCCGG+TGG + chr7_4:59148075-59148094 None:intergenic 55.0%
ATAGCACTGTTCCTGTGGGG+TGG - chr7_4:59148124-59148143 Msa1166990:intron 55.0%
GGCTTCACGCCACACACTTT+AGG + chr7_4:59148798-59148817 None:intergenic 55.0%
TTGAAGGAGGTTGACGGTGG+AGG + chr7_4:59149257-59149276 None:intergenic 55.0%
AGTTCTCTGGACCACCCCAC+AGG + chr7_4:59148138-59148157 None:intergenic 60.0%
CAACAAAAGCAGGCGCGCGT+AGG + chr7_4:59148819-59148838 None:intergenic 60.0%
!! CGAGTACTTCCAGGGTGCTG+AGG - chr7_4:59149091-59149110 Msa1166990:CDS 60.0%
!! TCCAGGGTGCTGAGGCTGTT+TGG - chr7_4:59149099-59149118 Msa1166990:CDS 60.0%
TCCAAACAGCCTCAGCACCC+TGG + chr7_4:59149103-59149122 None:intergenic 60.0%
AAGGAGGTTGACGGTGGAGG+TGG + chr7_4:59149254-59149273 None:intergenic 60.0%
AGTTCTCTGGACCACCCCAC+AGG + chr7_4:59148138-59148157 None:intergenic 60.0%
CAACAAAAGCAGGCGCGCGT+AGG + chr7_4:59148819-59148838 None:intergenic 60.0%
!! CGAGTACTTCCAGGGTGCTG+AGG - chr7_4:59149091-59149110 Msa1166990:CDS 60.0%
!! TCCAGGGTGCTGAGGCTGTT+TGG - chr7_4:59149099-59149118 Msa1166990:CDS 60.0%
TCCAAACAGCCTCAGCACCC+TGG + chr7_4:59149103-59149122 None:intergenic 60.0%
AAGGAGGTTGACGGTGGAGG+TGG + chr7_4:59149254-59149273 None:intergenic 60.0%
GAGGTTGACGGTGGAGGTGG+TGG + chr7_4:59149251-59149270 None:intergenic 65.0%
GAGGTTGACGGTGGAGGTGG+TGG + chr7_4:59149251-59149270 None:intergenic 65.0%
!! ATCTCGTGGAGGCGCCGCCA+TGG - chr7_4:59148036-59148055 Msa1166990:intron 70.0%
!! ATCTCGTGGAGGCGCCGCCA+TGG - chr7_4:59148036-59148055 Msa1166990:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 59147456 59149630 59147456 ID=Msa1166990;Name=Msa1166990
chr7_4 mRNA 59147456 59149630 59147456 ID=Msa1166990-mRNA-1;Parent=Msa1166990;Name=Msa1166990-mRNA-1;_AED=0.01;_eAED=0.01;_QI=115|1|1|1|1|1|2|316|303
chr7_4 exon 59147456 59148043 59147456 ID=Msa1166990-mRNA-1:exon:18333;Parent=Msa1166990-mRNA-1
chr7_4 exon 59148876 59149630 59148876 ID=Msa1166990-mRNA-1:exon:18332;Parent=Msa1166990-mRNA-1
chr7_4 five_prime_UTR 59149516 59149630 59149516 ID=Msa1166990-mRNA-1:five_prime_utr;Parent=Msa1166990-mRNA-1
chr7_4 CDS 59148876 59149515 59148876 ID=Msa1166990-mRNA-1:cds;Parent=Msa1166990-mRNA-1
chr7_4 CDS 59147772 59148043 59147772 ID=Msa1166990-mRNA-1:cds;Parent=Msa1166990-mRNA-1
chr7_4 three_prime_UTR 59147456 59147771 59147456 ID=Msa1166990-mRNA-1:three_prime_utr;Parent=Msa1166990-mRNA-1
Gene Sequence

>Msa1166990

ATGTCAATAAACCACACAATACAAGAAACAACATCACTATGGTGGAATCAACAACAACAACAACAAAGAACTCAACAAGATGCAGAAGAAGCTGAACTAGAAGATGATGTGGTTTTAGAATCAATAATGAAACTAAAAACAACAGAAGCATCATCAGAAGAAGAGAAAGAAGCTATGTTCGAGAAACCATTAACACCAAGCGACGTAGGGAAGTTGAACCGACTCGTTATTCCAAAACAACATGCTGAGAGATATTTCCCACTAGACTCAGAAGAAATCAAAGGTTTGTTACTAAGTTTTGAGGATGAGTCAGGTAAGTGTTGGAGGTTCCGGTATTCATATTGGAACAGTAGTCAAAGCTATGTTCTTACAAAAGGTTGGAGTCGTTATGTTAAAGATAAACGTCTTGATGCTGGTGATGTTGTTTTGTTTCAAAGACACCGTGTACATCCTCAACGGTTGTTTATCTCGTGGAGGCGCCGCCATGGTAGTAACTCTACTCCACCGGCTCATGTTAGCAGATCCATCTGTAGTGATGGCAATGGGAATGGGAATAGCACTGTTCCTGTGGGGTGGTCCAGAGAACTCTATCCTGCGCATCCTTATCCTACTCATCATCATCCCTTGTCATACCATGCAGGTGAAGGGTCCCAAAGTCAGAACACAACCACACCTTGTGGAAATAGTTCGAGTACTTCCAGGGTGCTGAGGCTGTTTGGAGTGAACATGGAATGCCAACCTGATAATAATATTAATATTAACAATATTAATGATTCCCAAACTTTGTCACCAGATTGCTCTTATAATATGTCATCAACACAAGGCACAGCTATCCCACAATTCTACCACCACCTCCACCGTCAACCTCCTTCAAATCCTCACCATCACATGCTACGTCAACAACCATATTAG
Protein sequence

>Msa1166990

MSINHTIQETTSLWWNQQQQQQRTQQDAEEAELEDDVVLESIMKLKTTEASSEEEKEAMFEKPLTPSDVGKLNRLVIPKQHAERYFPLDSEEIKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRVHPQRLFISWRRRHGSNSTPPAHVSRSICSDGNGNGNSTVPVGWSRELYPAHPYPTHHHPLSYHAGEGSQSQNTTTPCGNSSSTSRVLRLFGVNMECQPDNNININNINDSQTLSPDCSYNMSSTQGTAIPQFYHHLHRQPPSNPHHHMLRQQPY*