Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126490 | XP_013450272.2 | 96.575 | 438 | 14 | 1 | 16 | 452 | 84 | 521 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126490 | sp|Q67XX3|FB252_ARATH | 73.576 | 439 | 109 | 5 | 16 | 452 | 69 | 502 | 0.0 | 660 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126490 | A0A396HD35 | 96.575 | 438 | 14 | 1 | 16 | 452 | 84 | 521 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1126490 | TR | Jumonji |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1126490 | Msa1166890 | 0.846582 | 1.984585e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126490 | MtrunA17_Chr7g0268031 | 96.575 | 438 | 14 | 1 | 16 | 452 | 84 | 521 | 0.0 | 868 |
| Msa1126490 | MtrunA17_Chr3g0132281 | 38.798 | 366 | 211 | 8 | 21 | 376 | 13 | 375 | 1.38e-73 | 249 |
| Msa1126490 | MtrunA17_Chr3g0117261 | 27.682 | 289 | 146 | 11 | 142 | 376 | 18 | 297 | 2.74e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126490 | AT5G06550.1 | 73.576 | 439 | 109 | 5 | 16 | 452 | 69 | 502 | 0.0 | 660 |
| Msa1126490 | AT1G78280.1 | 39.178 | 365 | 209 | 8 | 21 | 376 | 8 | 368 | 5.08e-78 | 261 |
| Msa1126490 | AT5G63080.1 | 27.402 | 281 | 156 | 9 | 142 | 383 | 12 | 283 | 4.36e-18 | 86.7 |
Find 134 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGATTTGTTTGGTGTTT+TGG | 0.172983 | 7_3:-78059195 | Msa1126490:CDS |
| TCTATAATCAGCCGCAAATT+TGG | 0.187726 | 7_3:+78057525 | None:intergenic |
| TTCCAAGCTGAAGTTGAATT+TGG | 0.188370 | 7_3:+78059101 | None:intergenic |
| GATTATAGGTGGATTATTAT+TGG | 0.189791 | 7_3:-78059158 | Msa1126490:CDS |
| TCTACCTTTGTTGTTTCTAA+TGG | 0.205554 | 7_3:-78059656 | Msa1126490:CDS |
| ATGAAGCTTGAGGACTATTT+TGG | 0.210957 | 7_3:-78059326 | Msa1126490:CDS |
| GAATTGGGATAGAGATTATT+TGG | 0.233632 | 7_3:-78059396 | Msa1126490:CDS |
| GTTGATGGGTTTCAGTATAA+TGG | 0.244611 | 7_3:-78059689 | Msa1126490:CDS |
| TGGAAGGGTGTATTGATAAT+TGG | 0.249263 | 7_3:-78059430 | Msa1126490:CDS |
| TATGTATGAATTTCTTTAAA+AGG | 0.261215 | 7_3:+78057572 | None:intergenic |
| TGGTAATAGTTTAGGGGTTT+TGG | 0.265190 | 7_3:-78059786 | Msa1126490:CDS |
| TCAAAGGAACACTAGACTTT+AGG | 0.265500 | 7_3:+78057415 | None:intergenic |
| TGTTAGGAAGAGAGGGATTT+CGG | 0.288689 | 7_3:-78059501 | Msa1126490:CDS |
| GAGCTTGTTCTTGATATTCT+AGG | 0.289370 | 7_3:-78059818 | Msa1126490:CDS |
| GGGTACCCTTTGTTTGATAT+CGG | 0.290302 | 7_3:-78059635 | Msa1126490:CDS |
| AGAAGGAAAGTTTCCTTTGC+TGG | 0.297251 | 7_3:+78057637 | None:intergenic |
| CTACCTTTGTTGTTTCTAAT+GGG | 0.312871 | 7_3:-78059655 | Msa1126490:CDS |
| CAAAGGAACACTAGACTTTA+GGG | 0.316680 | 7_3:+78057416 | None:intergenic |
| ATTGGGATGCATTGAGGAAT+TGG | 0.321571 | 7_3:-78059412 | Msa1126490:CDS |
| GAAGAGAGGGATTTCGGTTG+AGG | 0.331066 | 7_3:-78059495 | Msa1126490:CDS |
| TCATATTCCAAACCCAATTT+CGG | 0.340210 | 7_3:+78059236 | None:intergenic |
| GCAAAGGAAACTTTCCTTCT+GGG | 0.341277 | 7_3:-78057634 | Msa1126490:CDS |
| TTTATGGTGCAACAAAGAAT+TGG | 0.346410 | 7_3:-78058950 | Msa1126490:CDS |
| GATAATATTGTTAGGAAGAG+AGG | 0.347047 | 7_3:-78059509 | Msa1126490:CDS |
| AACCATTCAATTATTGAAAC+AGG | 0.349564 | 7_3:+78058981 | None:intergenic |
| AGCAAAGGAAACTTTCCTTC+TGG | 0.361388 | 7_3:-78057635 | Msa1126490:CDS |
| TTGATGGGTTTCAGTATAAT+GGG | 0.365569 | 7_3:-78059688 | Msa1126490:CDS |
| AAAAGTTCCGAAATTGGGTT+TGG | 0.367524 | 7_3:-78059243 | Msa1126490:CDS |
| AACGCAAGCACACTGGTATC+TGG | 0.370811 | 7_3:-78057765 | Msa1126490:CDS |
| GCCCAGTGGTTGGTGGCATT+TGG | 0.374870 | 7_3:-78058877 | Msa1126490:CDS |
| CTTTGGTTTGGTATGGTGGC+TGG | 0.376278 | 7_3:+78060176 | None:intergenic |
| TGGAGAGGGATAATATTGTT+AGG | 0.381335 | 7_3:-78059517 | Msa1126490:CDS |
| TTGGGATGCATTGAGGAATT+GGG | 0.385650 | 7_3:-78059411 | Msa1126490:CDS |
| TGATCAAGGGGTCGAAGAAA+TGG | 0.385678 | 7_3:-78059073 | Msa1126490:CDS |
| ACCAGTGTCTCTGGAGTTGA+TGG | 0.391428 | 7_3:+78059868 | None:intergenic |
| GAGAAATTTGTTAAGTGTCT+TGG | 0.391444 | 7_3:-78057805 | Msa1126490:CDS |
| GGAAGGGTGTATTGATAATT+GGG | 0.393852 | 7_3:-78059429 | Msa1126490:CDS |
| TTGGTATGGTGGCTGGACTC+TGG | 0.395201 | 7_3:+78060183 | None:intergenic |
| ATTATTGGACCAGCTGGGTC+TGG | 0.396567 | 7_3:-78059143 | Msa1126490:CDS |
| GAAATGAGAGACCTGATTAT+AGG | 0.398403 | 7_3:-78059172 | Msa1126490:CDS |
| TCACTAATCATGAACCCCTT+TGG | 0.406513 | 7_3:-78059736 | Msa1126490:CDS |
| GGTTAATAAGCCGGTGTTGT+TGG | 0.408373 | 7_3:-78059450 | Msa1126490:CDS |
| GGGTTTGGAATATGAAGTTC+CGG | 0.409696 | 7_3:-78059228 | Msa1126490:CDS |
| CTCCTGTTTCAATAATTGAA+TGG | 0.415829 | 7_3:-78058983 | Msa1126490:CDS |
| ATAATAATCCACCTATAATC+AGG | 0.419067 | 7_3:+78059161 | None:intergenic |
| GCTAACATAGTTCTGTGTTA+TGG | 0.419792 | 7_3:+78058830 | None:intergenic |
| ATTACCTAAACCAGTGTCTC+TGG | 0.422088 | 7_3:+78059859 | None:intergenic |
| GATGCTACCTCTGCACCATC+AGG | 0.424520 | 7_3:+78059005 | None:intergenic |
| TTGATATCGGGAGTGGCGTT+CGG | 0.426068 | 7_3:-78059622 | Msa1126490:CDS |
| TTAGGGTCCACATATGCAAT+TGG | 0.427525 | 7_3:+78057433 | None:intergenic |
| TCAGATTGCTGACTTTGGTT+TGG | 0.427834 | 7_3:+78060164 | None:intergenic |
| AGCTTGGAATGCTGTGATCA+AGG | 0.428224 | 7_3:-78059087 | Msa1126490:CDS |
| AGCTTGTTCTTGATATTCTA+GGG | 0.429419 | 7_3:-78059817 | Msa1126490:CDS |
| AACTCCAGAGACACTGGTTT+AGG | 0.430834 | 7_3:-78059863 | Msa1126490:CDS |
| TGGATTATTATTGGACCAGC+TGG | 0.431844 | 7_3:-78059149 | Msa1126490:CDS |
| CTGACTTTGGTTTGGTATGG+TGG | 0.433563 | 7_3:+78060172 | None:intergenic |
| GCTTTACATATGCACTCAAT+TGG | 0.441061 | 7_3:+78058918 | None:intergenic |
| GGTACCCTTTGTTTGATATC+GGG | 0.441137 | 7_3:-78059634 | Msa1126490:CDS |
| CAGAAATCCAATTGCATATG+TGG | 0.444939 | 7_3:-78057440 | Msa1126490:three_prime_UTR |
| GATTTCGGTTGAGGAGTTTG+TGG | 0.461360 | 7_3:-78059486 | Msa1126490:CDS |
| ATCCAAATTCAACTTCAGCT+TGG | 0.469977 | 7_3:-78059103 | Msa1126490:CDS |
| CACACTGGTATCTGGAACAA+AGG | 0.473108 | 7_3:-78057757 | Msa1126490:CDS |
| GATACCAGTGTGCTTGCGTT+CGG | 0.473719 | 7_3:+78057768 | None:intergenic |
| TTGCTGACTTTGGTTTGGTA+TGG | 0.474340 | 7_3:+78060169 | None:intergenic |
| GTGTCTTGGAGTTTCTTAAG+AGG | 0.477250 | 7_3:-78057791 | Msa1126490:CDS |
| AATAAGCCGGTGTTGTTGGA+AGG | 0.481648 | 7_3:-78059446 | Msa1126490:CDS |
| AAGTTACTGATCCAAATTTG+CGG | 0.481971 | 7_3:-78057536 | Msa1126490:three_prime_UTR |
| GCTTGGAATGCTGTGATCAA+GGG | 0.490367 | 7_3:-78059086 | Msa1126490:CDS |
| CACCAAATGCCACCAACCAC+TGG | 0.491804 | 7_3:+78058875 | None:intergenic |
| CCTTTGTTTGATATCGGGAG+TGG | 0.492650 | 7_3:-78059629 | Msa1126490:CDS |
| TGAAAGGTGAATGGTTGGAG+AGG | 0.498202 | 7_3:-78059532 | Msa1126490:CDS |
| GATCAAGGGGTCGAAGAAAT+GGG | 0.508230 | 7_3:-78059072 | Msa1126490:CDS |
| CAGATCAAGTTAGAGAAGAA+AGG | 0.508713 | 7_3:-78059298 | Msa1126490:CDS |
| CCTTTGGAGGAATCTTGTGT+TGG | 0.509661 | 7_3:-78059720 | Msa1126490:CDS |
| CTAATCATGAACCCCTTTGG+AGG | 0.514583 | 7_3:-78059733 | Msa1126490:CDS |
| CAACACAAGATTCCTCCAAA+GGG | 0.515604 | 7_3:+78059721 | None:intergenic |
| GTCAGTTCATCAATTGCTCC+AGG | 0.519066 | 7_3:+78057684 | None:intergenic |
| ATTGAGTGCATATGTAAAGC+GGG | 0.520028 | 7_3:-78058915 | Msa1126490:CDS |
| TCCTCAAGCTTCATCTCCAC+AGG | 0.521980 | 7_3:+78059335 | None:intergenic |
| ATAATATTGTTAGGAAGAGA+GGG | 0.523338 | 7_3:-78059508 | Msa1126490:CDS |
| TTATCTTTGTGCCCAGTGGT+TGG | 0.523418 | 7_3:-78058887 | Msa1126490:CDS |
| TCTTTGTGCCCAGTGGTTGG+TGG | 0.525495 | 7_3:-78058884 | Msa1126490:CDS |
| ACCTCTGCACCATCAGGGCT+AGG | 0.527425 | 7_3:+78059011 | None:intergenic |
| GAACTTGAAAGCTCCCACTC+TGG | 0.530094 | 7_3:+78057596 | None:intergenic |
| TAAGTTTAAGAATGCTATTG+AGG | 0.530123 | 7_3:-78057715 | Msa1126490:CDS |
| TTATGGCAATTGATTCCTCC+AGG | 0.530459 | 7_3:+78058847 | None:intergenic |
| CACTCCCGATATCAAACAAA+GGG | 0.531337 | 7_3:+78059630 | None:intergenic |
| GTGGCATTTGGTGATCAACC+TGG | 0.533188 | 7_3:-78058865 | Msa1126490:CDS |
| TAACACAGAACTATGTTAGC+AGG | 0.539722 | 7_3:-78058827 | Msa1126490:intron |
| TGAAATGAAAGGTGAATGGT+TGG | 0.544161 | 7_3:-78059537 | Msa1126490:CDS |
| GGTGTTCATCCTAGCCCTGA+TGG | 0.546334 | 7_3:-78059020 | Msa1126490:CDS |
| CCTCCCGATGTTATTCCGCC+CGG | 0.551681 | 7_3:-78059041 | Msa1126490:CDS |
| TCCATCAACTCCAGAGACAC+TGG | 0.557132 | 7_3:-78059869 | Msa1126490:CDS |
| GGTTTCAGTATAATGGGTCA+TGG | 0.560008 | 7_3:-78059682 | Msa1126490:CDS |
| ACCAAATGCCACCAACCACT+GGG | 0.564265 | 7_3:+78058876 | None:intergenic |
| GATTATTTGGTTAAGTTGTG+TGG | 0.571733 | 7_3:-78059383 | Msa1126490:CDS |
| TTGATAATTGGGATGCATTG+AGG | 0.572075 | 7_3:-78059418 | Msa1126490:CDS |
| GAAAGGTGAATGGTTGGAGA+GGG | 0.572473 | 7_3:-78059531 | Msa1126490:CDS |
| GAAAACATTGAAGCAATCAA+AGG | 0.576683 | 7_3:+78057399 | None:intergenic |
| ATAAGCCGGTGTTGTTGGAA+GGG | 0.582277 | 7_3:-78059445 | Msa1126490:CDS |
| CCAACACAAGATTCCTCCAA+AGG | 0.589735 | 7_3:+78059720 | None:intergenic |
| ATCTTGAAATGAAAGGTGAA+TGG | 0.590130 | 7_3:-78059541 | Msa1126490:CDS |
| ACACCGGGCGGAATAACATC+GGG | 0.595142 | 7_3:+78059038 | None:intergenic |
| ATCAGGGCTAGGATGAACAC+CGG | 0.595347 | 7_3:+78059022 | None:intergenic |
| AAGAACAAGCTCATCAGTGA+GGG | 0.597323 | 7_3:+78059829 | None:intergenic |
| ATGAGAGACCTGATTATAGG+TGG | 0.603392 | 7_3:-78059169 | Msa1126490:CDS |
| TCCTAGCCCTGATGGTGCAG+AGG | 0.603932 | 7_3:-78059012 | Msa1126490:CDS |
| GAGGTTATCTTTGTGCCCAG+TGG | 0.605601 | 7_3:-78058891 | Msa1126490:CDS |
| GGATTATTATTGGACCAGCT+GGG | 0.609112 | 7_3:-78059148 | Msa1126490:CDS |
| AACACCGGGCGGAATAACAT+CGG | 0.610276 | 7_3:+78059037 | None:intergenic |
| TTTAGATGGTAATAGTTTAG+GGG | 0.614858 | 7_3:-78059792 | Msa1126490:CDS |
| TGTGCTAATCTTGAAATGAA+AGG | 0.615147 | 7_3:-78059548 | Msa1126490:CDS |
| CTTGGAATGCTGTGATCAAG+GGG | 0.619460 | 7_3:-78059085 | Msa1126490:CDS |
| AAAGACGATCCAGACCCAGC+TGG | 0.622160 | 7_3:+78059134 | None:intergenic |
| TTTGGATCAAACAGATACAA+CGG | 0.630505 | 7_3:+78059275 | None:intergenic |
| TCTGTTGCAGACACCAGAGT+GGG | 0.640693 | 7_3:-78057609 | Msa1126490:CDS |
| CCACTCCCGATATCAAACAA+AGG | 0.643905 | 7_3:+78059629 | None:intergenic |
| GCCTGTGGAGATGAAGCTTG+AGG | 0.644076 | 7_3:-78059336 | Msa1126490:CDS |
| ATGCTACCTCTGCACCATCA+GGG | 0.644492 | 7_3:+78059006 | None:intergenic |
| TTGAGTGCATATGTAAAGCG+GGG | 0.644930 | 7_3:-78058914 | Msa1126490:CDS |
| GTATGGTGGCTGGACTCTGG+AGG | 0.647859 | 7_3:+78060186 | None:intergenic |
| AATTGAGTGCATATGTAAAG+CGG | 0.648535 | 7_3:-78058916 | Msa1126490:CDS |
| GAGGCCGAACGCAAGCACAC+TGG | 0.652835 | 7_3:-78057772 | Msa1126490:CDS |
| GTCTGCAACAGAATCCCAGA+AGG | 0.653217 | 7_3:+78057620 | None:intergenic |
| CAAGAACAAGCTCATCAGTG+AGG | 0.659400 | 7_3:+78059828 | None:intergenic |
| AAATCCTCCCGAAAATACAC+CGG | 0.666892 | 7_3:+78059209 | None:intergenic |
| TCAGGGCTAGGATGAACACC+GGG | 0.669209 | 7_3:+78059023 | None:intergenic |
| ATACACCCTTCCAACAACAC+CGG | 0.670300 | 7_3:+78059440 | None:intergenic |
| TTCTGTTGCAGACACCAGAG+TGG | 0.688725 | 7_3:-78057610 | Msa1126490:CDS |
| GTACCCATTAGAAACAACAA+AGG | 0.698809 | 7_3:+78059652 | None:intergenic |
| AACACAAGATTCCTCCAAAG+GGG | 0.706242 | 7_3:+78059722 | None:intergenic |
| TGAGTGCATATGTAAAGCGG+GGG | 0.706771 | 7_3:-78058913 | Msa1126490:CDS |
| GCATTTGGTGATCAACCTGG+AGG | 0.725951 | 7_3:-78058862 | Msa1126490:CDS |
| GGGCTAGGATGAACACCGGG+CGG | 0.735361 | 7_3:+78059026 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATTTGAAAATTTAAT+CGG | - | chr7_3:78058927-78058946 | Msa1126490:CDS | 10.0% |
| !! | TATTCATTTCAAAATATAAA+GGG | + | chr7_3:78059066-78059085 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTTATTTCATG+TGG | - | chr7_3:78059576-78059595 | Msa1126490:CDS | 10.0% |
| !!! | GAATGTTTATTGTTTTAATT+CGG | - | chr7_3:78058849-78058868 | Msa1126490:CDS | 15.0% |
| !! | GTATTCATTTCAAAATATAA+AGG | + | chr7_3:78059067-78059086 | None:intergenic | 15.0% |
| !! | TATGTATGAATTTCTTTAAA+AGG | + | chr7_3:78059912-78059931 | None:intergenic | 15.0% |
| !! | AAATCAATTTCAATCAAAAA+AGG | + | chr7_3:78060195-78060214 | None:intergenic | 15.0% |
| !!! | TTTTTGATTGAAATTGATTT+TGG | - | chr7_3:78060195-78060214 | Msa1126490:CDS | 15.0% |
| !!! | TTTTTAGTAATGGAAGAAAT+GGG | + | chr7_3:78057465-78057484 | None:intergenic | 20.0% |
| !!! | TTTTTAGATGGTAATAGTTT+AGG | - | chr7_3:78057687-78057706 | Msa1126490:CDS | 20.0% |
| !!! | TTTTAGATGGTAATAGTTTA+GGG | - | chr7_3:78057688-78057707 | Msa1126490:CDS | 20.0% |
| !!! | TAAAGTTAGAGACTTTTATT+CGG | - | chr7_3:78057887-78057906 | Msa1126490:intron | 20.0% |
| !!! | TCTTAGTACTTTTAGATTAA+TGG | - | chr7_3:78058694-78058713 | Msa1126490:intron | 20.0% |
| !!! | CTTAGTACTTTTAGATTAAT+GGG | - | chr7_3:78058695-78058714 | Msa1126490:intron | 20.0% |
| !!! | GTCATTTTTTACATGTTAAT+AGG | - | chr7_3:78058819-78058838 | Msa1126490:intron | 20.0% |
| !!! | TATATTTTGAAATGAATACG+AGG | - | chr7_3:78059068-78059087 | Msa1126490:CDS | 20.0% |
| !!! | ATATTTTGAAATGAATACGA+GGG | - | chr7_3:78059069-78059088 | Msa1126490:CDS | 20.0% |
| !!! | TTGCTATTTTGAATACTTAT+TGG | - | chr7_3:78059505-78059524 | Msa1126490:CDS | 20.0% |
| !!! | TCTTTGTTCTTGTTTTGATA+CGG | + | chr7_3:78057386-78057405 | None:intergenic | 25.0% |
| !!! | GTTTTTGTTTCGGTTTTTTT+TGG | + | chr7_3:78057418-78057437 | None:intergenic | 25.0% |
| !!! | TTTTAGTAATGGAAGAAATG+GGG | + | chr7_3:78057464-78057483 | None:intergenic | 25.0% |
| !!! | GTTTTTAGTAATGGAAGAAA+TGG | + | chr7_3:78057466-78057485 | None:intergenic | 25.0% |
| ! | TTTAGATGGTAATAGTTTAG+GGG | - | chr7_3:78057689-78057708 | Msa1126490:CDS | 25.0% |
| ! | ATAATATTGTTAGGAAGAGA+GGG | - | chr7_3:78057973-78057992 | Msa1126490:intron | 25.0% |
| ! | ATAATAATCCACCTATAATC+AGG | + | chr7_3:78058323-78058342 | None:intergenic | 25.0% |
| !!! | GATTATAGGTGGATTATTAT+TGG | - | chr7_3:78058323-78058342 | Msa1126490:intron | 25.0% |
| ! | AACCATTCAATTATTGAAAC+AGG | + | chr7_3:78058503-78058522 | None:intergenic | 25.0% |
| ! | ACTACTTAACAGACAAAAAA+AGG | + | chr7_3:78058801-78058820 | None:intergenic | 25.0% |
| !! | ATTTTCAAATATGTAGTCCA+AGG | + | chr7_3:78058922-78058941 | None:intergenic | 25.0% |
| ! | GGAGTCATTATAATTAGAAA+TGG | - | chr7_3:78058948-78058967 | Msa1126490:CDS | 25.0% |
| !!! | TTATTGATTCACAATAGCAT+GGG | - | chr7_3:78058990-78059009 | Msa1126490:CDS | 25.0% |
| !!! | CTTTTGGTTTTGTATTTTGT+TGG | - | chr7_3:78059607-78059626 | Msa1126490:CDS | 25.0% |
| ! | TAAGTTTAAGAATGCTATTG+AGG | - | chr7_3:78059766-78059785 | Msa1126490:CDS | 25.0% |
| !! | CTTTTTCTCTTCTTCTTTTT+GGG | + | chr7_3:78059822-78059841 | None:intergenic | 25.0% |
| !! | TCTTTTTCTCTTCTTCTTTT+TGG | + | chr7_3:78059823-78059842 | None:intergenic | 25.0% |
| !!! | TGTTGTACTCTATTTTTTAG+AGG | - | chr7_3:78060012-78060031 | Msa1126490:intron | 25.0% |
| !!! | CTTTGTTCTTGTTTTGATAC+GGG | + | chr7_3:78057385-78057404 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTGAGTTTGTGA+GGG | + | chr7_3:78057440-78057459 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTTTGAGTTTGTG+AGG | + | chr7_3:78057441-78057460 | None:intergenic | 30.0% |
| !!! | AGATGAGTGGTTTTTAGTAA+TGG | + | chr7_3:78057475-78057494 | None:intergenic | 30.0% |
| TTTGATGTCGAAACATTCTT+CGG | + | chr7_3:78057529-78057548 | None:intergenic | 30.0% | |
| ! | AGCTTGTTCTTGATATTCTA+GGG | - | chr7_3:78057664-78057683 | Msa1126490:CDS | 30.0% |
| !!! | GATATTCTAGGGTTTTTAGA+TGG | - | chr7_3:78057675-78057694 | Msa1126490:CDS | 30.0% |
| ! | TGTTGGAGAATTTTGTTGAT+GGG | - | chr7_3:78057778-78057797 | Msa1126490:CDS | 30.0% |
| !! | TTGATGGGTTTCAGTATAAT+GGG | - | chr7_3:78057793-78057812 | Msa1126490:CDS | 30.0% |
| !! | TCTACCTTTGTTGTTTCTAA+TGG | - | chr7_3:78057825-78057844 | Msa1126490:intron | 30.0% |
| !! | CTACCTTTGTTGTTTCTAAT+GGG | - | chr7_3:78057826-78057845 | Msa1126490:intron | 30.0% |
| TGTGCTAATCTTGAAATGAA+AGG | - | chr7_3:78057933-78057952 | Msa1126490:intron | 30.0% | |
| ATCTTGAAATGAAAGGTGAA+TGG | - | chr7_3:78057940-78057959 | Msa1126490:intron | 30.0% | |
| GATAATATTGTTAGGAAGAG+AGG | - | chr7_3:78057972-78057991 | Msa1126490:intron | 30.0% | |
| GAATTGGGATAGAGATTATT+TGG | - | chr7_3:78058085-78058104 | Msa1126490:intron | 30.0% | |
| ! | GATTATTTGGTTAAGTTGTG+TGG | - | chr7_3:78058098-78058117 | Msa1126490:intron | 30.0% |
| !! | TGGTGATGATGTTAAGTTTT+CGG | - | chr7_3:78058118-78058137 | Msa1126490:intron | 30.0% |
| ! | ATGATGTTAAGTTTTCGGTT+GGG | - | chr7_3:78058123-78058142 | Msa1126490:intron | 30.0% |
| TTTGGATCAAACAGATACAA+CGG | + | chr7_3:78058209-78058228 | None:intergenic | 30.0% | |
| !!! | GGAACTTTTTCAGCAAATTT+TGG | + | chr7_3:78058227-78058246 | None:intergenic | 30.0% |
| TCATATTCCAAACCCAATTT+CGG | + | chr7_3:78058248-78058267 | None:intergenic | 30.0% | |
| CTCCTGTTTCAATAATTGAA+TGG | - | chr7_3:78058498-78058517 | Msa1126490:intron | 30.0% | |
| ! | GAATGGTTCATGAACTTTTA+TGG | - | chr7_3:78058515-78058534 | Msa1126490:intron | 30.0% |
| TTTATGGTGCAACAAAGAAT+TGG | - | chr7_3:78058531-78058550 | Msa1126490:intron | 30.0% | |
| AATTGAGTGCATATGTAAAG+CGG | - | chr7_3:78058565-78058584 | Msa1126490:intron | 30.0% | |
| AAAAAAGGACACATCAAATC+AGG | + | chr7_3:78058786-78058805 | None:intergenic | 30.0% | |
| AATTAGAAATGGTCAGTACA+TGG | - | chr7_3:78058959-78058978 | Msa1126490:CDS | 30.0% | |
| !! | CTTATTGATTCACAATAGCA+TGG | - | chr7_3:78058989-78059008 | Msa1126490:CDS | 30.0% |
| AGAGAAAAAAACTTTCCATC+AGG | + | chr7_3:78059220-78059239 | None:intergenic | 30.0% | |
| TTTCTCATTTAGTGCATGTT+TGG | - | chr7_3:78059263-78059282 | Msa1126490:CDS | 30.0% | |
| ! | ACAATGACAACGTGATTTTA+TGG | - | chr7_3:78059310-78059329 | Msa1126490:CDS | 30.0% |
| ! | TTTTAGCAAAAGCTGCATTT+TGG | + | chr7_3:78059341-78059360 | None:intergenic | 30.0% |
| AATCATTAGCCGATCATATT+TGG | + | chr7_3:78059403-78059422 | None:intergenic | 30.0% | |
| TGAATACTTATTGGAATCCA+TGG | - | chr7_3:78059514-78059533 | Msa1126490:CDS | 30.0% | |
| ! | TCATGTGGTTTGAATTCTTT+TGG | - | chr7_3:78059591-78059610 | Msa1126490:CDS | 30.0% |
| !! | GAGAAATTTGTTAAGTGTCT+TGG | - | chr7_3:78059676-78059695 | Msa1126490:CDS | 30.0% |
| AAGTTACTGATCCAAATTTG+CGG | - | chr7_3:78059945-78059964 | Msa1126490:intron | 30.0% | |
| GAAAACATTGAAGCAATCAA+AGG | + | chr7_3:78060085-78060104 | None:intergenic | 30.0% | |
| ! | TGTTTTCACTAGCTAAGAAA+TGG | - | chr7_3:78060098-78060117 | Msa1126490:intron | 30.0% |
| !! | TGTAATCAGATTGCTGACTT+TGG | + | chr7_3:78057325-78057344 | None:intergenic | 35.0% |
| !! | GTTTGTGAGGGTTTTTGTTT+CGG | + | chr7_3:78057428-78057447 | None:intergenic | 35.0% |
| ! | TAATGGAAGAAATGGGGTTT+TGG | + | chr7_3:78057458-78057477 | None:intergenic | 35.0% |
| TTGAAATAGAGATTGCCCAA+GGG | + | chr7_3:78057585-78057604 | None:intergenic | 35.0% | |
| ATTGAAATAGAGATTGCCCA+AGG | + | chr7_3:78057586-78057605 | None:intergenic | 35.0% | |
| ! | GAGCTTGTTCTTGATATTCT+AGG | - | chr7_3:78057663-78057682 | Msa1126490:CDS | 35.0% |
| ! | TGGTAATAGTTTAGGGGTTT+TGG | - | chr7_3:78057695-78057714 | Msa1126490:CDS | 35.0% |
| ! | GTGTTGGAGAATTTTGTTGA+TGG | - | chr7_3:78057777-78057796 | Msa1126490:CDS | 35.0% |
| !! | GTTGATGGGTTTCAGTATAA+TGG | - | chr7_3:78057792-78057811 | Msa1126490:CDS | 35.0% |
| GTACCCATTAGAAACAACAA+AGG | + | chr7_3:78057832-78057851 | None:intergenic | 35.0% | |
| !!! | CGGATTATCTTTTTCAGAGT+TGG | - | chr7_3:78057907-78057926 | Msa1126490:intron | 35.0% |
| TGAAATGAAAGGTGAATGGT+TGG | - | chr7_3:78057944-78057963 | Msa1126490:intron | 35.0% | |
| TGGAGAGGGATAATATTGTT+AGG | - | chr7_3:78057964-78057983 | Msa1126490:intron | 35.0% | |
| !! | TTTTGAGGAGGTTAATAAGC+CGG | - | chr7_3:78058022-78058041 | Msa1126490:intron | 35.0% |
| ! | TGGAAGGGTGTATTGATAAT+TGG | - | chr7_3:78058051-78058070 | Msa1126490:intron | 35.0% |
| ! | GGAAGGGTGTATTGATAATT+GGG | - | chr7_3:78058052-78058071 | Msa1126490:intron | 35.0% |
| ! | TTGATAATTGGGATGCATTG+AGG | - | chr7_3:78058063-78058082 | Msa1126490:intron | 35.0% |
| ! | GATGATGTTAAGTTTTCGGT+TGG | - | chr7_3:78058122-78058141 | Msa1126490:intron | 35.0% |
| ! | ATGAAGCTTGAGGACTATTT+TGG | - | chr7_3:78058155-78058174 | Msa1126490:intron | 35.0% |
| CAGATCAAGTTAGAGAAGAA+AGG | - | chr7_3:78058183-78058202 | Msa1126490:intron | 35.0% | |
| TGCTGAAAAAGTTCCGAAAT+TGG | - | chr7_3:78058232-78058251 | Msa1126490:intron | 35.0% | |
| GCTGAAAAAGTTCCGAAATT+GGG | - | chr7_3:78058233-78058252 | Msa1126490:intron | 35.0% | |
| AAAAGTTCCGAAATTGGGTT+TGG | - | chr7_3:78058238-78058257 | Msa1126490:intron | 35.0% | |
| ! | ATGAAGTTCCGGTGTATTTT+CGG | - | chr7_3:78058264-78058283 | Msa1126490:intron | 35.0% |
| !! | TATTTTCGGGAGGATTTGTT+TGG | - | chr7_3:78058278-78058297 | Msa1126490:intron | 35.0% |
| !!! | GAGGATTTGTTTGGTGTTTT+GGG | - | chr7_3:78058287-78058306 | Msa1126490:intron | 35.0% |
| GAAATGAGAGACCTGATTAT+AGG | - | chr7_3:78058309-78058328 | Msa1126490:intron | 35.0% | |
| ATCCAAATTCAACTTCAGCT+TGG | - | chr7_3:78058378-78058397 | Msa1126490:intron | 35.0% | |
| TTCCAAGCTGAAGTTGAATT+TGG | + | chr7_3:78058383-78058402 | None:intergenic | 35.0% | |
| GCTTTACATATGCACTCAAT+TGG | + | chr7_3:78058566-78058585 | None:intergenic | 35.0% | |
| ATTGAGTGCATATGTAAAGC+GGG | - | chr7_3:78058566-78058585 | Msa1126490:intron | 35.0% | |
| ! | GCTAACATAGTTCTGTGTTA+TGG | + | chr7_3:78058654-78058673 | None:intergenic | 35.0% |
| TAACACAGAACTATGTTAGC+AGG | - | chr7_3:78058654-78058673 | Msa1126490:intron | 35.0% | |
| GAAATTCATTGAAGCTGCAA+TGG | + | chr7_3:78059044-78059063 | None:intergenic | 35.0% | |
| !!! | TTTTGAAATGAATACGAGGG+AGG | - | chr7_3:78059072-78059091 | Msa1126490:CDS | 35.0% |
| GTTTAGTGACCTTGAGATAT+TGG | - | chr7_3:78059149-78059168 | Msa1126490:CDS | 35.0% | |
| GATTATGTGATTCCTAGAAG+GGG | + | chr7_3:78059198-78059217 | None:intergenic | 35.0% | |
| GGATTATGTGATTCCTAGAA+GGG | + | chr7_3:78059199-78059218 | None:intergenic | 35.0% | |
| AGGATTATGTGATTCCTAGA+AGG | + | chr7_3:78059200-78059219 | None:intergenic | 35.0% | |
| TAGGAATCACATAATCCTGA+TGG | - | chr7_3:78059202-78059221 | Msa1126490:CDS | 35.0% | |
| !! | ATTTGGATTGGCAGTGAATT+CGG | + | chr7_3:78059386-78059405 | None:intergenic | 35.0% |
| ACTGCCAATCCAAATATGAT+CGG | - | chr7_3:78059391-78059410 | Msa1126490:CDS | 35.0% | |
| TTAGCCGATCATATTTGGAT+TGG | + | chr7_3:78059398-78059417 | None:intergenic | 35.0% | |
| ATCATATCACATGCGCTTAT+CGG | + | chr7_3:78059453-78059472 | None:intergenic | 35.0% | |
| ACTTATTGGAATCCATGGAA+CGG | - | chr7_3:78059519-78059538 | Msa1126490:CDS | 35.0% | |
| ACTTTAACCTCAAACGTTAG+CGG | - | chr7_3:78059641-78059660 | Msa1126490:CDS | 35.0% | |
| AAGAGAAAAAGATCCAGCAA+AGG | - | chr7_3:78059831-78059850 | Msa1126490:CDS | 35.0% | |
| TCTATAATCAGCCGCAAATT+TGG | + | chr7_3:78059959-78059978 | None:intergenic | 35.0% | |
| CAGAAATCCAATTGCATATG+TGG | - | chr7_3:78060041-78060060 | Msa1126490:intron | 35.0% | |
| CAAAGGAACACTAGACTTTA+GGG | + | chr7_3:78060068-78060087 | None:intergenic | 35.0% | |
| TCAAAGGAACACTAGACTTT+AGG | + | chr7_3:78060069-78060088 | None:intergenic | 35.0% | |
| !! | TTGCTGACTTTGGTTTGGTA+TGG | + | chr7_3:78057315-78057334 | None:intergenic | 40.0% |
| !! | TCAGATTGCTGACTTTGGTT+TGG | + | chr7_3:78057320-78057339 | None:intergenic | 40.0% |
| GGCAATCTCTATTTCAATCC+AGG | - | chr7_3:78057588-78057607 | Msa1126490:CDS | 40.0% | |
| ATTACCTAAACCAGTGTCTC+TGG | + | chr7_3:78057625-78057644 | None:intergenic | 40.0% | |
| AAGAACAAGCTCATCAGTGA+GGG | + | chr7_3:78057655-78057674 | None:intergenic | 40.0% | |
| TCACTAATCATGAACCCCTT+TGG | - | chr7_3:78057745-78057764 | Msa1126490:CDS | 40.0% | |
| AACACAAGATTCCTCCAAAG+GGG | + | chr7_3:78057762-78057781 | None:intergenic | 40.0% | |
| CAACACAAGATTCCTCCAAA+GGG | + | chr7_3:78057763-78057782 | None:intergenic | 40.0% | |
| !! | GGTTTCAGTATAATGGGTCA+TGG | - | chr7_3:78057799-78057818 | Msa1126490:CDS | 40.0% |
| ! | GGGTACCCTTTGTTTGATAT+CGG | - | chr7_3:78057846-78057865 | Msa1126490:intron | 40.0% |
| ! | GGTACCCTTTGTTTGATATC+GGG | - | chr7_3:78057847-78057866 | Msa1126490:intron | 40.0% |
| CACTCCCGATATCAAACAAA+GGG | + | chr7_3:78057854-78057873 | None:intergenic | 40.0% | |
| TGTTAGGAAGAGAGGGATTT+CGG | - | chr7_3:78057980-78057999 | Msa1126490:intron | 40.0% | |
| ATTGGGATGCATTGAGGAAT+TGG | - | chr7_3:78058069-78058088 | Msa1126490:intron | 40.0% | |
| TTGGGATGCATTGAGGAATT+GGG | - | chr7_3:78058070-78058089 | Msa1126490:intron | 40.0% | |
| ! | GGGTTTGGAATATGAAGTTC+CGG | - | chr7_3:78058253-78058272 | Msa1126490:intron | 40.0% |
| ! | TGAAGTTCCGGTGTATTTTC+GGG | - | chr7_3:78058265-78058284 | Msa1126490:intron | 40.0% |
| AAATCCTCCCGAAAATACAC+CGG | + | chr7_3:78058275-78058294 | None:intergenic | 40.0% | |
| !!! | GGAGGATTTGTTTGGTGTTT+TGG | - | chr7_3:78058286-78058305 | Msa1126490:intron | 40.0% |
| ATGAGAGACCTGATTATAGG+TGG | - | chr7_3:78058312-78058331 | Msa1126490:intron | 40.0% | |
| TGGATTATTATTGGACCAGC+TGG | - | chr7_3:78058332-78058351 | Msa1126490:intron | 40.0% | |
| GGATTATTATTGGACCAGCT+GGG | - | chr7_3:78058333-78058352 | Msa1126490:intron | 40.0% | |
| TTGAGTGCATATGTAAAGCG+GGG | - | chr7_3:78058567-78058586 | Msa1126490:intron | 40.0% | |
| ! | TTATGGCAATTGATTCCTCC+AGG | + | chr7_3:78058637-78058656 | None:intergenic | 40.0% |
| TCGGATGTTAAAACATCCCT+TGG | - | chr7_3:78058868-78058887 | Msa1126490:CDS | 40.0% | |
| TATATGTATCCCTACTCCCT+AGG | - | chr7_3:78059101-78059120 | Msa1126490:CDS | 40.0% | |
| TCAGTGAGCTATTGTACCTA+GGG | + | chr7_3:78059120-78059139 | None:intergenic | 40.0% | |
| ATCAGTGAGCTATTGTACCT+AGG | + | chr7_3:78059121-78059140 | None:intergenic | 40.0% | |
| AATATAACGAGTCCGTTCCA+TGG | + | chr7_3:78059534-78059553 | None:intergenic | 40.0% | |
| GTGTCTTGGAGTTTCTTAAG+AGG | - | chr7_3:78059690-78059709 | Msa1126490:CDS | 40.0% | |
| AGAAGGAAAGTTTCCTTTGC+TGG | + | chr7_3:78059847-78059866 | None:intergenic | 40.0% | |
| AGCAAAGGAAACTTTCCTTC+TGG | - | chr7_3:78059846-78059865 | Msa1126490:CDS | 40.0% | |
| GCAAAGGAAACTTTCCTTCT+GGG | - | chr7_3:78059847-78059866 | Msa1126490:CDS | 40.0% | |
| TTAGGGTCCACATATGCAAT+TGG | + | chr7_3:78060051-78060070 | None:intergenic | 40.0% | |
| !! | CTGACTTTGGTTTGGTATGG+TGG | + | chr7_3:78057312-78057331 | None:intergenic | 45.0% |
| CTTCTTCAACGAGAGATGAG+TGG | + | chr7_3:78057488-78057507 | None:intergenic | 45.0% | |
| !! | AACTCCAGAGACACTGGTTT+AGG | - | chr7_3:78057618-78057637 | Msa1126490:CDS | 45.0% |
| CAAGAACAAGCTCATCAGTG+AGG | + | chr7_3:78057656-78057675 | None:intergenic | 45.0% | |
| CTAATCATGAACCCCTTTGG+AGG | - | chr7_3:78057748-78057767 | Msa1126490:CDS | 45.0% | |
| CCAACACAAGATTCCTCCAA+AGG | + | chr7_3:78057764-78057783 | None:intergenic | 45.0% | |
| ! | CCTTTGGAGGAATCTTGTGT+TGG | - | chr7_3:78057761-78057780 | Msa1126490:CDS | 45.0% |
| CCACTCCCGATATCAAACAA+AGG | + | chr7_3:78057855-78057874 | None:intergenic | 45.0% | |
| ! | CCTTTGTTTGATATCGGGAG+TGG | - | chr7_3:78057852-78057871 | Msa1126490:intron | 45.0% |
| TGAAAGGTGAATGGTTGGAG+AGG | - | chr7_3:78057949-78057968 | Msa1126490:intron | 45.0% | |
| GAAAGGTGAATGGTTGGAGA+GGG | - | chr7_3:78057950-78057969 | Msa1126490:intron | 45.0% | |
| GATTTCGGTTGAGGAGTTTG+TGG | - | chr7_3:78057995-78058014 | Msa1126490:intron | 45.0% | |
| ! | GGAGTTTGTGGCGAATTTTG+AGG | - | chr7_3:78058007-78058026 | Msa1126490:intron | 45.0% |
| !! | GTTTGTGGCGAATTTTGAGG+AGG | - | chr7_3:78058010-78058029 | Msa1126490:intron | 45.0% |
| !! | GGTTAATAAGCCGGTGTTGT+TGG | - | chr7_3:78058031-78058050 | Msa1126490:intron | 45.0% |
| !! | AATAAGCCGGTGTTGTTGGA+AGG | - | chr7_3:78058035-78058054 | Msa1126490:intron | 45.0% |
| !! | ATAAGCCGGTGTTGTTGGAA+GGG | - | chr7_3:78058036-78058055 | Msa1126490:intron | 45.0% |
| ATACACCCTTCCAACAACAC+CGG | + | chr7_3:78058044-78058063 | None:intergenic | 45.0% | |
| AGCTTGGAATGCTGTGATCA+AGG | - | chr7_3:78058394-78058413 | Msa1126490:intron | 45.0% | |
| GCTTGGAATGCTGTGATCAA+GGG | - | chr7_3:78058395-78058414 | Msa1126490:intron | 45.0% | |
| CTTGGAATGCTGTGATCAAG+GGG | - | chr7_3:78058396-78058415 | Msa1126490:intron | 45.0% | |
| TGATCAAGGGGTCGAAGAAA+TGG | - | chr7_3:78058408-78058427 | Msa1126490:intron | 45.0% | |
| GATCAAGGGGTCGAAGAAAT+GGG | - | chr7_3:78058409-78058428 | Msa1126490:intron | 45.0% | |
| TGAGTGCATATGTAAAGCGG+GGG | - | chr7_3:78058568-78058587 | Msa1126490:intron | 45.0% | |
| TTATCTTTGTGCCCAGTGGT+TGG | - | chr7_3:78058594-78058613 | Msa1126490:intron | 45.0% | |
| TCCCTTGGCATCTCAAAATC+TGG | - | chr7_3:78058883-78058902 | Msa1126490:CDS | 45.0% | |
| !!! | GCCAGATTTTGAGATGCCAA+GGG | + | chr7_3:78058887-78058906 | None:intergenic | 45.0% |
| !!! | AGCCAGATTTTGAGATGCCA+AGG | + | chr7_3:78058888-78058907 | None:intergenic | 45.0% |
| GCTATTGTACCTAGGGAGTA+GGG | + | chr7_3:78059113-78059132 | None:intergenic | 45.0% | |
| AGCTATTGTACCTAGGGAGT+AGG | + | chr7_3:78059114-78059133 | None:intergenic | 45.0% | |
| ! | ACAAGTACCGCTAACGTTTG+AGG | + | chr7_3:78059651-78059670 | None:intergenic | 45.0% |
| ! | ACGTTAGCGGTACTTGTTAC+AGG | - | chr7_3:78059654-78059673 | Msa1126490:CDS | 45.0% |
| ! | CACACTGGTATCTGGAACAA+AGG | - | chr7_3:78059724-78059743 | Msa1126490:CDS | 45.0% |
| ! | GCTATTGAGGCTTCTTTTCC+TGG | - | chr7_3:78059779-78059798 | Msa1126490:CDS | 45.0% |
| GTCAGTTCATCAATTGCTCC+AGG | + | chr7_3:78059800-78059819 | None:intergenic | 45.0% | |
| !! | CTTTGGTTTGGTATGGTGGC+TGG | + | chr7_3:78057308-78057327 | None:intergenic | 50.0% |
| !! | TCTCTGGAGTTGATGGAACC+TGG | + | chr7_3:78057609-78057628 | None:intergenic | 50.0% |
| TCCATCAACTCCAGAGACAC+TGG | - | chr7_3:78057612-78057631 | Msa1126490:CDS | 50.0% | |
| !! | ACCAGTGTCTCTGGAGTTGA+TGG | + | chr7_3:78057616-78057635 | None:intergenic | 50.0% |
| TTGATATCGGGAGTGGCGTT+CGG | - | chr7_3:78057859-78057878 | Msa1126490:intron | 50.0% | |
| GAAGAGAGGGATTTCGGTTG+AGG | - | chr7_3:78057986-78058005 | Msa1126490:intron | 50.0% | |
| ! | TAAGTTTTCGGTTGGGCCTG+TGG | - | chr7_3:78058130-78058149 | Msa1126490:intron | 50.0% |
| TCCTCAAGCTTCATCTCCAC+AGG | + | chr7_3:78058149-78058168 | None:intergenic | 50.0% | |
| !! | AGTTCCGGTGTATTTTCGGG+AGG | - | chr7_3:78058268-78058287 | Msa1126490:intron | 50.0% |
| ATTATTGGACCAGCTGGGTC+TGG | - | chr7_3:78058338-78058357 | Msa1126490:intron | 50.0% | |
| AACACCGGGCGGAATAACAT+CGG | + | chr7_3:78058447-78058466 | None:intergenic | 50.0% | |
| ATCAGGGCTAGGATGAACAC+CGG | + | chr7_3:78058462-78058481 | None:intergenic | 50.0% | |
| ATGCTACCTCTGCACCATCA+GGG | + | chr7_3:78058478-78058497 | None:intergenic | 50.0% | |
| GAGGTTATCTTTGTGCCCAG+TGG | - | chr7_3:78058590-78058609 | Msa1126490:intron | 50.0% | |
| ACCAAATGCCACCAACCACT+GGG | + | chr7_3:78058608-78058627 | None:intergenic | 50.0% | |
| ! | GTGGCATTTGGTGATCAACC+TGG | - | chr7_3:78058616-78058635 | Msa1126490:intron | 50.0% |
| ! | GCATTTGGTGATCAACCTGG+AGG | - | chr7_3:78058619-78058638 | Msa1126490:intron | 50.0% |
| !! | CTGGCTCTTTAGAGTGTCCT+TGG | - | chr7_3:78058902-78058921 | Msa1126490:CDS | 50.0% |
| TCATTGAAGCTGCAATGGCG+TGG | + | chr7_3:78059039-78059058 | None:intergenic | 50.0% | |
| AGGTTCGCGCCAATATCTCA+AGG | + | chr7_3:78059161-78059180 | None:intergenic | 50.0% | |
| GTAGAATCAGTGTGTCGCAC+TGG | + | chr7_3:78059364-78059383 | None:intergenic | 50.0% | |
| GATACCAGTGTGCTTGCGTT+CGG | + | chr7_3:78059716-78059735 | None:intergenic | 50.0% | |
| AACGCAAGCACACTGGTATC+TGG | - | chr7_3:78059716-78059735 | Msa1126490:CDS | 50.0% | |
| GTCTGCAACAGAATCCCAGA+AGG | + | chr7_3:78059864-78059883 | None:intergenic | 50.0% | |
| TTCTGTTGCAGACACCAGAG+TGG | - | chr7_3:78059871-78059890 | Msa1126490:CDS | 50.0% | |
| TCTGTTGCAGACACCAGAGT+GGG | - | chr7_3:78059872-78059891 | Msa1126490:CDS | 50.0% | |
| GAACTTGAAAGCTCCCACTC+TGG | + | chr7_3:78059888-78059907 | None:intergenic | 50.0% | |
| TTGGTATGGTGGCTGGACTC+TGG | + | chr7_3:78057301-78057320 | None:intergenic | 55.0% | |
| TGAACACCGTGGGTGTGTGA+CGG | + | chr7_3:78057561-78057580 | None:intergenic | 55.0% | |
| GCCTGTGGAGATGAAGCTTG+AGG | - | chr7_3:78058145-78058164 | Msa1126490:intron | 55.0% | |
| AAAGACGATCCAGACCCAGC+TGG | + | chr7_3:78058350-78058369 | None:intergenic | 55.0% | |
| ACACCGGGCGGAATAACATC+GGG | + | chr7_3:78058446-78058465 | None:intergenic | 55.0% | |
| TCAGGGCTAGGATGAACACC+GGG | + | chr7_3:78058461-78058480 | None:intergenic | 55.0% | |
| GGTGTTCATCCTAGCCCTGA+TGG | - | chr7_3:78058461-78058480 | Msa1126490:intron | 55.0% | |
| GATGCTACCTCTGCACCATC+AGG | + | chr7_3:78058479-78058498 | None:intergenic | 55.0% | |
| GTGCATATGTAAAGCGGGGG+AGG | - | chr7_3:78058571-78058590 | Msa1126490:intron | 55.0% | |
| TCTTTGTGCCCAGTGGTTGG+TGG | - | chr7_3:78058597-78058616 | Msa1126490:intron | 55.0% | |
| CACCAAATGCCACCAACCAC+TGG | + | chr7_3:78058609-78058628 | None:intergenic | 55.0% | |
| GGCGCGAACCTTCACAAAGT+CGG | - | chr7_3:78059170-78059189 | Msa1126490:CDS | 55.0% | |
| AAGGGGCTCCGACTTTGTGA+AGG | + | chr7_3:78059181-78059200 | None:intergenic | 55.0% | |
| ACAAAGTCGGAGCCCCTTCT+AGG | - | chr7_3:78059183-78059202 | Msa1126490:CDS | 55.0% | |
| GTATGGTGGCTGGACTCTGG+AGG | + | chr7_3:78057298-78057317 | None:intergenic | 60.0% | |
| AACACCGTGGGTGTGTGACG+GGG | + | chr7_3:78057559-78057578 | None:intergenic | 60.0% | |
| GAACACCGTGGGTGTGTGAC+GGG | + | chr7_3:78057560-78057579 | None:intergenic | 60.0% | |
| ACCCACGGTGTTCAGCCCTT+GGG | - | chr7_3:78057567-78057586 | Msa1126490:three_prime_UTR | 60.0% | |
| CCTCCCGATGTTATTCCGCC+CGG | - | chr7_3:78058440-78058459 | Msa1126490:intron | 60.0% | |
| ! | TCCTAGCCCTGATGGTGCAG+AGG | - | chr7_3:78058469-78058488 | Msa1126490:intron | 60.0% |
| ACCTCTGCACCATCAGGGCT+AGG | + | chr7_3:78058473-78058492 | None:intergenic | 60.0% | |
| !! | GCCCAGTGGTTGGTGGCATT+TGG | - | chr7_3:78058604-78058623 | Msa1126490:intron | 60.0% |
| TCTGCCCCGTCACACACCCA+CGG | - | chr7_3:78057552-78057571 | Msa1126490:three_prime_UTR | 65.0% | |
| CACCCACGGTGTTCAGCCCT+TGG | - | chr7_3:78057566-78057585 | Msa1126490:three_prime_UTR | 65.0% | |
| GCCCAAGGGCTGAACACCGT+GGG | + | chr7_3:78057571-78057590 | None:intergenic | 65.0% | |
| TGCCCAAGGGCTGAACACCG+TGG | + | chr7_3:78057572-78057591 | None:intergenic | 65.0% | |
| CCGGGCGGAATAACATCGGG+AGG | + | chr7_3:78058443-78058462 | None:intergenic | 65.0% | |
| GGGCTAGGATGAACACCGGG+CGG | + | chr7_3:78058458-78058477 | None:intergenic | 65.0% | |
| GAGGCCGAACGCAAGCACAC+TGG | - | chr7_3:78059709-78059728 | Msa1126490:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 78057275 | 78060228 | 78057275 | ID=Msa1126490;Name=Msa1126490 |
| chr7_3 | mRNA | 78057275 | 78060228 | 78057275 | ID=Msa1126490-mRNA-1;Parent=Msa1126490;Name=Msa1126490-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.5|0.33|1|0.5|0.66|3|312|452 |
| chr7_3 | exon | 78057275 | 78057827 | 78057275 | ID=Msa1126490-mRNA-1:exon:21682;Parent=Msa1126490-mRNA-1 |
| chr7_3 | exon | 78058828 | 78059893 | 78058828 | ID=Msa1126490-mRNA-1:exon:21681;Parent=Msa1126490-mRNA-1 |
| chr7_3 | exon | 78060177 | 78060228 | 78060177 | ID=Msa1126490-mRNA-1:exon:21680;Parent=Msa1126490-mRNA-1 |
| chr7_3 | CDS | 78060177 | 78060228 | 78060177 | ID=Msa1126490-mRNA-1:cds;Parent=Msa1126490-mRNA-1 |
| chr7_3 | CDS | 78058828 | 78059893 | 78058828 | ID=Msa1126490-mRNA-1:cds;Parent=Msa1126490-mRNA-1 |
| chr7_3 | CDS | 78057587 | 78057827 | 78057587 | ID=Msa1126490-mRNA-1:cds;Parent=Msa1126490-mRNA-1 |
| chr7_3 | three_prime_UTR | 78057275 | 78057586 | 78057275 | ID=Msa1126490-mRNA-1:three_prime_utr;Parent=Msa1126490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
