Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166890 | XP_013450272.2 | 96.169 | 522 | 18 | 2 | 1 | 521 | 1 | 521 | 0.0 | 987 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166890 | sp|Q67XX3|FB252_ARATH | 73.753 | 461 | 114 | 5 | 63 | 521 | 47 | 502 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166890 | A0A396HD35 | 96.169 | 522 | 18 | 2 | 1 | 521 | 1 | 521 | 0.0 | 987 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1166890 | TR | Jumonji |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1126490 | Msa1166890 | 0.846582 | 1.984585e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166890 | MtrunA17_Chr7g0268031 | 96.169 | 522 | 18 | 2 | 1 | 521 | 1 | 521 | 0.0 | 987 |
| Msa1166890 | MtrunA17_Chr3g0132281 | 39.071 | 366 | 210 | 8 | 90 | 445 | 13 | 375 | 3.25e-73 | 250 |
| Msa1166890 | MtrunA17_Chr3g0117261 | 26.990 | 289 | 148 | 10 | 211 | 445 | 18 | 297 | 2.82e-15 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166890 | AT5G06550.1 | 73.753 | 461 | 114 | 5 | 63 | 521 | 47 | 502 | 0.0 | 700 |
| Msa1166890 | AT1G78280.1 | 39.566 | 369 | 208 | 9 | 87 | 445 | 5 | 368 | 1.66e-78 | 265 |
| Msa1166890 | AT5G63080.1 | 27.758 | 281 | 155 | 9 | 211 | 452 | 12 | 283 | 4.20e-18 | 87.4 |
Find 152 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGATTTGTTTGGTGTTT+TGG | 0.172983 | 7_4:+59040899 | Msa1166890:CDS |
| TCTATAATCAGCCGCAAATT+TGG | 0.187726 | 7_4:-59042569 | None:intergenic |
| TTCCAAGCTGAAGTTGAATT+TGG | 0.188370 | 7_4:-59040993 | None:intergenic |
| GATTATAGGTGGATTATTAT+TGG | 0.189791 | 7_4:+59040936 | Msa1166890:CDS |
| ATGAAGCTTAAGGACTATTT+TGG | 0.203220 | 7_4:+59040768 | Msa1166890:CDS |
| TCTACCTTTGTTGTTTCTAA+TGG | 0.205554 | 7_4:+59040438 | Msa1166890:CDS |
| GAATTGGGATAGAGATTATT+TGG | 0.233632 | 7_4:+59040698 | Msa1166890:CDS |
| GTTGATGGGTTTCAGTATAA+TGG | 0.244611 | 7_4:+59040405 | Msa1166890:CDS |
| TGGAAGGGTGTATTGATAAT+TGG | 0.249263 | 7_4:+59040664 | Msa1166890:CDS |
| TATGTATGAATTTCTTTAAA+AGG | 0.261215 | 7_4:-59042522 | None:intergenic |
| TGGTAATAGTTTAGGGGTTT+TGG | 0.265190 | 7_4:+59040308 | Msa1166890:CDS |
| TCAAAGGAACACTAGACTTT+AGG | 0.265500 | 7_4:-59042679 | None:intergenic |
| TGTTAGGAAGAGAGGGATTT+CGG | 0.288689 | 7_4:+59040593 | Msa1166890:CDS |
| GAGCTTGTTCTTGATATTCT+AGG | 0.289370 | 7_4:+59040276 | Msa1166890:CDS |
| GGGTACCCTTTGTTTGATAT+CGG | 0.290302 | 7_4:+59040459 | Msa1166890:CDS |
| AGAAGGAAAGTTTCCTTTGC+TGG | 0.297251 | 7_4:-59042457 | None:intergenic |
| CTACCTTTGTTGTTTCTAAT+GGG | 0.312871 | 7_4:+59040439 | Msa1166890:CDS |
| CAAAGGAACACTAGACTTTA+GGG | 0.316680 | 7_4:-59042678 | None:intergenic |
| ATTGGGATGCATTGAGGAAT+TGG | 0.321571 | 7_4:+59040682 | Msa1166890:CDS |
| TAATGGAAGAAATGGGGTTT+TGG | 0.321890 | 7_4:-59040068 | None:intergenic |
| GAAGAGAGGGATTTCGGTTG+AGG | 0.331066 | 7_4:+59040599 | Msa1166890:CDS |
| TCATATTCCAAACCCAATTT+CGG | 0.340210 | 7_4:-59040858 | None:intergenic |
| GCAAAGGAAACTTTCCTTCT+GGG | 0.341277 | 7_4:+59042460 | Msa1166890:CDS |
| TTTATGGTGCAACAAAGAAT+TGG | 0.346410 | 7_4:+59041144 | Msa1166890:CDS |
| GATAATATTGTTAGGAAGAG+AGG | 0.347047 | 7_4:+59040585 | Msa1166890:CDS |
| AACCATTCAATTATTGAAAC+AGG | 0.349564 | 7_4:-59041113 | None:intergenic |
| AGCAAAGGAAACTTTCCTTC+TGG | 0.361388 | 7_4:+59042459 | Msa1166890:CDS |
| GGGAATGTTTGGTATCAAAA+TGG | 0.363594 | 7_4:+59039810 | None:intergenic |
| TTGATGGGTTTCAGTATAAT+GGG | 0.365569 | 7_4:+59040406 | Msa1166890:CDS |
| AAAAGTTCCGAAATTGGGTT+TGG | 0.367524 | 7_4:+59040851 | Msa1166890:CDS |
| AACGCAAGCACACTGGTATC+TGG | 0.370811 | 7_4:+59042329 | Msa1166890:CDS |
| GCCCAGTGGTTGGTGGCATT+TGG | 0.374870 | 7_4:+59041217 | Msa1166890:CDS |
| CTTTGGTTTGGTATGGTGGC+TGG | 0.376278 | 7_4:-59039918 | None:intergenic |
| TGGAGAGGGATAATATTGTT+AGG | 0.381335 | 7_4:+59040577 | Msa1166890:CDS |
| CACCCACGGTGTTCAGCCCT+TGG | 0.382559 | 7_4:+59040179 | Msa1166890:CDS |
| TTGGGATGCATTGAGGAATT+GGG | 0.385650 | 7_4:+59040683 | Msa1166890:CDS |
| TGATCAAGGGGTCGAAGAAA+TGG | 0.385678 | 7_4:+59041021 | Msa1166890:CDS |
| ACCAGTGTCTCTGGAGTTGA+TGG | 0.391428 | 7_4:-59040226 | None:intergenic |
| GAGAAATTTGTTAAGTGTCT+TGG | 0.391444 | 7_4:+59042289 | Msa1166890:CDS |
| GGAAGGGTGTATTGATAATT+GGG | 0.393852 | 7_4:+59040665 | Msa1166890:CDS |
| TTGGTATGGTGGCTGGACTC+TGG | 0.395201 | 7_4:-59039911 | None:intergenic |
| ATTATTGGACCAGCTGGGTC+TGG | 0.396567 | 7_4:+59040951 | Msa1166890:CDS |
| GAAATGAGAGACCTGATTAT+AGG | 0.398403 | 7_4:+59040922 | Msa1166890:CDS |
| GAACACCGTGGGTGTGTGAC+GGG | 0.400221 | 7_4:-59040170 | None:intergenic |
| TCACTAATCATGAACCCCTT+TGG | 0.406513 | 7_4:+59040358 | Msa1166890:CDS |
| GGTTAATAAGCCGGTGTTGT+TGG | 0.408373 | 7_4:+59040644 | Msa1166890:CDS |
| GGGTTTGGAATATGAAGTTC+CGG | 0.409696 | 7_4:+59040866 | Msa1166890:CDS |
| CTCCTGTTTCAATAATTGAA+TGG | 0.415829 | 7_4:+59041111 | Msa1166890:CDS |
| ATAATAATCCACCTATAATC+AGG | 0.419067 | 7_4:-59040933 | None:intergenic |
| GCTAACATAGTTCTGTGTTA+TGG | 0.419792 | 7_4:-59041264 | None:intergenic |
| ATTACCTAAACCAGTGTCTC+TGG | 0.422088 | 7_4:-59040235 | None:intergenic |
| GATGCTACCTCTGCACCATC+AGG | 0.424520 | 7_4:-59041089 | None:intergenic |
| GGCAATCTCTATTTCAATCC+AGG | 0.425479 | 7_4:+59040201 | Msa1166890:CDS |
| TTGATATCGGGAGTGGCGTT+CGG | 0.426068 | 7_4:+59040472 | Msa1166890:CDS |
| TTAGGGTCCACATATGCAAT+TGG | 0.427525 | 7_4:-59042661 | None:intergenic |
| TCAGATTGCTGACTTTGGTT+TGG | 0.427834 | 7_4:-59039930 | None:intergenic |
| AGCTTGGAATGCTGTGATCA+AGG | 0.428224 | 7_4:+59041007 | Msa1166890:CDS |
| AGCTTGTTCTTGATATTCTA+GGG | 0.429419 | 7_4:+59040277 | Msa1166890:CDS |
| AACTCCAGAGACACTGGTTT+AGG | 0.430834 | 7_4:+59040231 | Msa1166890:CDS |
| TGGATTATTATTGGACCAGC+TGG | 0.431844 | 7_4:+59040945 | Msa1166890:CDS |
| CTGACTTTGGTTTGGTATGG+TGG | 0.433563 | 7_4:-59039922 | None:intergenic |
| GCTTTACATATGCACTCAAT+TGG | 0.441061 | 7_4:-59041176 | None:intergenic |
| GGTACCCTTTGTTTGATATC+GGG | 0.441137 | 7_4:+59040460 | Msa1166890:CDS |
| CAGAAATCCAATTGCATATG+TGG | 0.444939 | 7_4:+59042654 | Msa1166890:three_prime_UTR |
| TGAACACCGTGGGTGTGTGA+CGG | 0.450073 | 7_4:-59040171 | None:intergenic |
| GATTTCGGTTGAGGAGTTTG+TGG | 0.461360 | 7_4:+59040608 | Msa1166890:CDS |
| ATCCAAATTCAACTTCAGCT+TGG | 0.469977 | 7_4:+59040991 | Msa1166890:CDS |
| CACACTGGTATCTGGAACAA+AGG | 0.473108 | 7_4:+59042337 | Msa1166890:CDS |
| GATACCAGTGTGCTTGCGTT+CGG | 0.473719 | 7_4:-59042326 | None:intergenic |
| TTGCTGACTTTGGTTTGGTA+TGG | 0.474340 | 7_4:-59039925 | None:intergenic |
| GTGTCTTGGAGTTTCTTAAG+AGG | 0.477250 | 7_4:+59042303 | Msa1166890:CDS |
| AATAAGCCGGTGTTGTTGGA+AGG | 0.481648 | 7_4:+59040648 | Msa1166890:CDS |
| AAGTTACTGATCCAAATTTG+CGG | 0.481971 | 7_4:+59042558 | Msa1166890:three_prime_UTR |
| TGTAATCAGATTGCTGACTT+TGG | 0.487706 | 7_4:-59039935 | None:intergenic |
| GCTTGGAATGCTGTGATCAA+GGG | 0.490367 | 7_4:+59041008 | Msa1166890:CDS |
| CACCAAATGCCACCAACCAC+TGG | 0.491804 | 7_4:-59041219 | None:intergenic |
| CCTTTGTTTGATATCGGGAG+TGG | 0.492650 | 7_4:+59040465 | Msa1166890:CDS |
| TTTGATGTCGAAACATTCTT+CGG | 0.495045 | 7_4:-59040139 | None:intergenic |
| TGAAAGGTGAATGGTTGGAG+AGG | 0.498202 | 7_4:+59040562 | Msa1166890:CDS |
| ACCCACGGTGTTCAGCCCTT+GGG | 0.502505 | 7_4:+59040180 | Msa1166890:CDS |
| GCCTGTGGAGATGAAGCTTA+AGG | 0.506931 | 7_4:+59040758 | Msa1166890:CDS |
| GATCAAGGGGTCGAAGAAAT+GGG | 0.508230 | 7_4:+59041022 | Msa1166890:CDS |
| CAGATCAAGTTAGAGAAGAA+AGG | 0.508713 | 7_4:+59040796 | Msa1166890:CDS |
| TCTCTGGAGTTGATGGAACC+TGG | 0.509296 | 7_4:-59040219 | None:intergenic |
| CCTTTGGAGGAATCTTGTGT+TGG | 0.509661 | 7_4:+59040374 | Msa1166890:CDS |
| CTAATCATGAACCCCTTTGG+AGG | 0.514583 | 7_4:+59040361 | Msa1166890:CDS |
| CAACACAAGATTCCTCCAAA+GGG | 0.515604 | 7_4:-59040373 | None:intergenic |
| GTCAGTTCATCAATTGCTCC+AGG | 0.519066 | 7_4:-59042410 | None:intergenic |
| ATTGAGTGCATATGTAAAGC+GGG | 0.520028 | 7_4:+59041179 | Msa1166890:CDS |
| TCCTTAAGCTTCATCTCCAC+AGG | 0.521980 | 7_4:-59040759 | None:intergenic |
| ATAATATTGTTAGGAAGAGA+GGG | 0.523338 | 7_4:+59040586 | Msa1166890:CDS |
| TTATCTTTGTGCCCAGTGGT+TGG | 0.523418 | 7_4:+59041207 | Msa1166890:CDS |
| TAAGACTGTCTATAGAAGCT+TGG | 0.524028 | 7_4:-59039864 | None:intergenic |
| TCTTTGTGCCCAGTGGTTGG+TGG | 0.525495 | 7_4:+59041210 | Msa1166890:CDS |
| ACCTCTGCACCATCAGGGCT+AGG | 0.527425 | 7_4:-59041083 | None:intergenic |
| GAACTTGAAAGCTCCCACTC+TGG | 0.530094 | 7_4:-59042498 | None:intergenic |
| TAAGTTTAAGAATGCTATTG+AGG | 0.530123 | 7_4:+59042379 | Msa1166890:CDS |
| TTATGGCAATTGATTCCTCC+AGG | 0.530459 | 7_4:-59041247 | None:intergenic |
| CACTCCCGATATCAAACAAA+GGG | 0.531337 | 7_4:-59040464 | None:intergenic |
| GTGGCATTTGGTGATCAACC+TGG | 0.533188 | 7_4:+59041229 | Msa1166890:CDS |
| TAACACAGAACTATGTTAGC+AGG | 0.539722 | 7_4:+59041267 | Msa1166890:CDS |
| TGAAATGAAAGGTGAATGGT+TGG | 0.544161 | 7_4:+59040557 | Msa1166890:CDS |
| GGTGTTCATCCTAGCCCTGA+TGG | 0.546334 | 7_4:+59041074 | Msa1166890:CDS |
| CCTCCCGATGTTATTCCGCC+CGG | 0.551681 | 7_4:+59041053 | Msa1166890:CDS |
| TCCATCAACTCCAGAGACAC+TGG | 0.557132 | 7_4:+59040225 | Msa1166890:CDS |
| GGTTTCAGTATAATGGGTCA+TGG | 0.560008 | 7_4:+59040412 | Msa1166890:CDS |
| ACCAAATGCCACCAACCACT+GGG | 0.564265 | 7_4:-59041218 | None:intergenic |
| CTTCTTCAACGAGAGATGAG+TGG | 0.567416 | 7_4:-59040098 | None:intergenic |
| GATTATTTGGTTAAGTTGTG+TGG | 0.571733 | 7_4:+59040711 | Msa1166890:CDS |
| TTGATAATTGGGATGCATTG+AGG | 0.572075 | 7_4:+59040676 | Msa1166890:CDS |
| GAAAGGTGAATGGTTGGAGA+GGG | 0.572473 | 7_4:+59040563 | Msa1166890:CDS |
| GAAAACATTGAAGCAATCAA+AGG | 0.576683 | 7_4:-59042695 | None:intergenic |
| ATAAGCCGGTGTTGTTGGAA+GGG | 0.582277 | 7_4:+59040649 | Msa1166890:CDS |
| CCAACACAAGATTCCTCCAA+AGG | 0.589735 | 7_4:-59040374 | None:intergenic |
| ATCTTGAAATGAAAGGTGAA+TGG | 0.590130 | 7_4:+59040553 | Msa1166890:CDS |
| ACACCGGGCGGAATAACATC+GGG | 0.595142 | 7_4:-59041056 | None:intergenic |
| ATCAGGGCTAGGATGAACAC+CGG | 0.595347 | 7_4:-59041072 | None:intergenic |
| AAGAACAAGCTCATCAGTGA+GGG | 0.597323 | 7_4:-59040265 | None:intergenic |
| GCCCAAGGGCTGAACACCGT+GGG | 0.602240 | 7_4:-59040181 | None:intergenic |
| ATGAGAGACCTGATTATAGG+TGG | 0.603392 | 7_4:+59040925 | Msa1166890:CDS |
| TCCTAGCCCTGATGGTGCAG+AGG | 0.603932 | 7_4:+59041082 | Msa1166890:CDS |
| GAGGTTATCTTTGTGCCCAG+TGG | 0.605601 | 7_4:+59041203 | Msa1166890:CDS |
| GGATTATTATTGGACCAGCT+GGG | 0.609112 | 7_4:+59040946 | Msa1166890:CDS |
| AACACCGGGCGGAATAACAT+CGG | 0.610276 | 7_4:-59041057 | None:intergenic |
| TTTAGATGGTAATAGTTTAG+GGG | 0.614858 | 7_4:+59040302 | Msa1166890:CDS |
| TGTGCTAATCTTGAAATGAA+AGG | 0.615147 | 7_4:+59040546 | Msa1166890:CDS |
| CTTGGAATGCTGTGATCAAG+GGG | 0.619460 | 7_4:+59041009 | Msa1166890:CDS |
| AAAGACGATCCAGACCCAGC+TGG | 0.622160 | 7_4:-59040960 | None:intergenic |
| TCTGCCCCGTCACACACCCA+CGG | 0.625768 | 7_4:+59040165 | Msa1166890:CDS |
| AACACCGTGGGTGTGTGACG+GGG | 0.625830 | 7_4:-59040169 | None:intergenic |
| TTTGGATCAAACAGATACAA+CGG | 0.630505 | 7_4:-59040819 | None:intergenic |
| TCTGTTGCAGACACCAGAGT+GGG | 0.640693 | 7_4:+59042485 | Msa1166890:CDS |
| CCACTCCCGATATCAAACAA+AGG | 0.643905 | 7_4:-59040465 | None:intergenic |
| ATGCTACCTCTGCACCATCA+GGG | 0.644492 | 7_4:-59041088 | None:intergenic |
| TTGAGTGCATATGTAAAGCG+GGG | 0.644930 | 7_4:+59041180 | Msa1166890:CDS |
| GTATGGTGGCTGGACTCTGG+AGG | 0.647859 | 7_4:-59039908 | None:intergenic |
| AATTGAGTGCATATGTAAAG+CGG | 0.648535 | 7_4:+59041178 | Msa1166890:CDS |
| GAGGCCGAACGCAAGCACAC+TGG | 0.652835 | 7_4:+59042322 | Msa1166890:CDS |
| GTCTGCAACAGAATCCCAGA+AGG | 0.653217 | 7_4:-59042474 | None:intergenic |
| CAAGAACAAGCTCATCAGTG+AGG | 0.659400 | 7_4:-59040266 | None:intergenic |
| TTGAAATAGAGATTGCCCAA+GGG | 0.664210 | 7_4:-59040195 | None:intergenic |
| AAATCCTCCCGAAAATACAC+CGG | 0.666892 | 7_4:-59040885 | None:intergenic |
| TCAGGGCTAGGATGAACACC+GGG | 0.669209 | 7_4:-59041071 | None:intergenic |
| ATACACCCTTCCAACAACAC+CGG | 0.670300 | 7_4:-59040654 | None:intergenic |
| TGCCCAAGGGCTGAACACCG+TGG | 0.670914 | 7_4:-59040182 | None:intergenic |
| ATTGAAATAGAGATTGCCCA+AGG | 0.684435 | 7_4:-59040196 | None:intergenic |
| TTCTGTTGCAGACACCAGAG+TGG | 0.688725 | 7_4:+59042484 | Msa1166890:CDS |
| GTACCCATTAGAAACAACAA+AGG | 0.698809 | 7_4:-59040442 | None:intergenic |
| AACACAAGATTCCTCCAAAG+GGG | 0.706242 | 7_4:-59040372 | None:intergenic |
| TGAGTGCATATGTAAAGCGG+GGG | 0.706771 | 7_4:+59041181 | Msa1166890:CDS |
| GCATTTGGTGATCAACCTGG+AGG | 0.725951 | 7_4:+59041232 | Msa1166890:CDS |
| GGGCTAGGATGAACACCGGG+CGG | 0.735361 | 7_4:-59041068 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATTTGAAAATTTAAT+CGG | + | chr7_4:59041540-59041559 | Msa1166890:intron | 10.0% |
| !! | TATTCATTTCAAAATATAAA+GGG | - | chr7_4:59041679-59041698 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTTATTTCATG+TGG | + | chr7_4:59042189-59042208 | Msa1166890:intron | 10.0% |
| !!! | GAATGTTTATTGTTTTAATT+CGG | + | chr7_4:59041462-59041481 | Msa1166890:intron | 15.0% |
| !! | GTATTCATTTCAAAATATAA+AGG | - | chr7_4:59041680-59041699 | None:intergenic | 15.0% |
| !! | TATGTATGAATTTCTTTAAA+AGG | - | chr7_4:59042525-59042544 | None:intergenic | 15.0% |
| !! | AAATCAATTTCAATCAAAAA+AGG | - | chr7_4:59042808-59042827 | None:intergenic | 15.0% |
| !!! | TTTTTGATTGAAATTGATTT+TGG | + | chr7_4:59042808-59042827 | Msa1166890:three_prime_UTR | 15.0% |
| !!! | GAAATACTACTTTAGTTTTT+TGG | - | chr7_4:59039845-59039864 | None:intergenic | 20.0% |
| !!! | TTTTTAGTAATGGAAGAAAT+GGG | - | chr7_4:59040078-59040097 | None:intergenic | 20.0% |
| !!! | TTTTTAGATGGTAATAGTTT+AGG | + | chr7_4:59040300-59040319 | Msa1166890:CDS | 20.0% |
| !!! | TTTTAGATGGTAATAGTTTA+GGG | + | chr7_4:59040301-59040320 | Msa1166890:CDS | 20.0% |
| !!! | TAAAGTTAGAGACTTTTATT+CGG | + | chr7_4:59040500-59040519 | Msa1166890:CDS | 20.0% |
| !!! | CTTAGTACTTTTAGATTAAT+AGG | + | chr7_4:59041308-59041327 | Msa1166890:intron | 20.0% |
| !!! | GTCATTTTTTACATGTTAAT+AGG | + | chr7_4:59041432-59041451 | Msa1166890:intron | 20.0% |
| !!! | TATATTTTGAAATGAATACG+AGG | + | chr7_4:59041681-59041700 | Msa1166890:intron | 20.0% |
| !!! | ATATTTTGAAATGAATACGA+GGG | + | chr7_4:59041682-59041701 | Msa1166890:intron | 20.0% |
| !!! | TTGCTATTTTGAATACTTAT+TGG | + | chr7_4:59042118-59042137 | Msa1166890:intron | 20.0% |
| !!! | TCTTTGTTCTTGTTTTGATA+CGG | - | chr7_4:59039999-59040018 | None:intergenic | 25.0% |
| !!! | GTTTTTGTTTCGGTTTTTTT+TGG | - | chr7_4:59040031-59040050 | None:intergenic | 25.0% |
| !!! | TTTTAGTAATGGAAGAAATG+GGG | - | chr7_4:59040077-59040096 | None:intergenic | 25.0% |
| !!! | GTTTTTAGTAATGGAAGAAA+TGG | - | chr7_4:59040079-59040098 | None:intergenic | 25.0% |
| ! | TTTAGATGGTAATAGTTTAG+GGG | + | chr7_4:59040302-59040321 | Msa1166890:CDS | 25.0% |
| ! | ATAATATTGTTAGGAAGAGA+GGG | + | chr7_4:59040586-59040605 | Msa1166890:CDS | 25.0% |
| ! | ATAATAATCCACCTATAATC+AGG | - | chr7_4:59040936-59040955 | None:intergenic | 25.0% |
| !!! | GATTATAGGTGGATTATTAT+TGG | + | chr7_4:59040936-59040955 | Msa1166890:CDS | 25.0% |
| ! | AACCATTCAATTATTGAAAC+AGG | - | chr7_4:59041116-59041135 | None:intergenic | 25.0% |
| ! | ACTACTTAACAGACAAAAAA+AGG | - | chr7_4:59041414-59041433 | None:intergenic | 25.0% |
| !! | ATTTTCAAATATGTAGTCCA+AGG | - | chr7_4:59041535-59041554 | None:intergenic | 25.0% |
| ! | GGAGTCATTATAATTAGAAA+TGG | + | chr7_4:59041561-59041580 | Msa1166890:intron | 25.0% |
| !!! | TTATTGATTCACAATAGCAT+GGG | + | chr7_4:59041603-59041622 | Msa1166890:intron | 25.0% |
| !!! | CTTTTGGTTTTGTATTTTGT+TGG | + | chr7_4:59042220-59042239 | Msa1166890:intron | 25.0% |
| ! | TAAGTTTAAGAATGCTATTG+AGG | + | chr7_4:59042379-59042398 | Msa1166890:CDS | 25.0% |
| !! | CTTTTTCTCTTCTTCTTTTT+GGG | - | chr7_4:59042435-59042454 | None:intergenic | 25.0% |
| !! | TCTTTTTCTCTTCTTCTTTT+TGG | - | chr7_4:59042436-59042455 | None:intergenic | 25.0% |
| !!! | TGTTGTACTCTATTTTTTAG+AGG | + | chr7_4:59042625-59042644 | Msa1166890:three_prime_UTR | 25.0% |
| !!! | CTTTGTTCTTGTTTTGATAC+GGG | - | chr7_4:59039998-59040017 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTGAGTTTGTGA+GGG | - | chr7_4:59040053-59040072 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTTTGAGTTTGTG+AGG | - | chr7_4:59040054-59040073 | None:intergenic | 30.0% |
| !!! | AGATGAGTGGTTTTTAGTAA+TGG | - | chr7_4:59040088-59040107 | None:intergenic | 30.0% |
| TTTGATGTCGAAACATTCTT+CGG | - | chr7_4:59040142-59040161 | None:intergenic | 30.0% | |
| ! | AGCTTGTTCTTGATATTCTA+GGG | + | chr7_4:59040277-59040296 | Msa1166890:CDS | 30.0% |
| !!! | GATATTCTAGGGTTTTTAGA+TGG | + | chr7_4:59040288-59040307 | Msa1166890:CDS | 30.0% |
| ! | TGTTGGAGAATTTTGTTGAT+GGG | + | chr7_4:59040391-59040410 | Msa1166890:CDS | 30.0% |
| !! | TTGATGGGTTTCAGTATAAT+GGG | + | chr7_4:59040406-59040425 | Msa1166890:CDS | 30.0% |
| !! | TCTACCTTTGTTGTTTCTAA+TGG | + | chr7_4:59040438-59040457 | Msa1166890:CDS | 30.0% |
| !! | CTACCTTTGTTGTTTCTAAT+GGG | + | chr7_4:59040439-59040458 | Msa1166890:CDS | 30.0% |
| TGTGCTAATCTTGAAATGAA+AGG | + | chr7_4:59040546-59040565 | Msa1166890:CDS | 30.0% | |
| ATCTTGAAATGAAAGGTGAA+TGG | + | chr7_4:59040553-59040572 | Msa1166890:CDS | 30.0% | |
| GATAATATTGTTAGGAAGAG+AGG | + | chr7_4:59040585-59040604 | Msa1166890:CDS | 30.0% | |
| GAATTGGGATAGAGATTATT+TGG | + | chr7_4:59040698-59040717 | Msa1166890:CDS | 30.0% | |
| ! | GATTATTTGGTTAAGTTGTG+TGG | + | chr7_4:59040711-59040730 | Msa1166890:CDS | 30.0% |
| !! | TGGTGATGATGTTAAGTTTT+CGG | + | chr7_4:59040731-59040750 | Msa1166890:CDS | 30.0% |
| ! | ATGATGTTAAGTTTTCGGTT+GGG | + | chr7_4:59040736-59040755 | Msa1166890:CDS | 30.0% |
| ! | ATGAAGCTTAAGGACTATTT+TGG | + | chr7_4:59040768-59040787 | Msa1166890:CDS | 30.0% |
| TTTGGATCAAACAGATACAA+CGG | - | chr7_4:59040822-59040841 | None:intergenic | 30.0% | |
| !!! | GGAACTTTTTCAGCAAATTT+TGG | - | chr7_4:59040840-59040859 | None:intergenic | 30.0% |
| TCATATTCCAAACCCAATTT+CGG | - | chr7_4:59040861-59040880 | None:intergenic | 30.0% | |
| CTCCTGTTTCAATAATTGAA+TGG | + | chr7_4:59041111-59041130 | Msa1166890:CDS | 30.0% | |
| ! | GAATGGTTCATGAACTTTTA+TGG | + | chr7_4:59041128-59041147 | Msa1166890:CDS | 30.0% |
| TTTATGGTGCAACAAAGAAT+TGG | + | chr7_4:59041144-59041163 | Msa1166890:CDS | 30.0% | |
| AATTGAGTGCATATGTAAAG+CGG | + | chr7_4:59041178-59041197 | Msa1166890:CDS | 30.0% | |
| AAAAAAGGACACATCAAATC+AGG | - | chr7_4:59041399-59041418 | None:intergenic | 30.0% | |
| AATTAGAAATGGTCAGTACA+TGG | + | chr7_4:59041572-59041591 | Msa1166890:intron | 30.0% | |
| !! | CTTATTGATTCACAATAGCA+TGG | + | chr7_4:59041602-59041621 | Msa1166890:intron | 30.0% |
| AGAGAAAAAAACTTTCCATC+AGG | - | chr7_4:59041833-59041852 | None:intergenic | 30.0% | |
| TTTCTCATTTAGTGCATGTT+TGG | + | chr7_4:59041876-59041895 | Msa1166890:intron | 30.0% | |
| ! | ACAATGACAACGTGATTTTA+TGG | + | chr7_4:59041923-59041942 | Msa1166890:intron | 30.0% |
| AATCATTAGCCGATCATATT+TGG | - | chr7_4:59042016-59042035 | None:intergenic | 30.0% | |
| TGAATACTTATTGGAATCCA+TGG | + | chr7_4:59042127-59042146 | Msa1166890:intron | 30.0% | |
| ! | TCATGTGGTTTGAATTCTTT+TGG | + | chr7_4:59042204-59042223 | Msa1166890:intron | 30.0% |
| !! | GAGAAATTTGTTAAGTGTCT+TGG | + | chr7_4:59042289-59042308 | Msa1166890:CDS | 30.0% |
| AAGTTACTGATCCAAATTTG+CGG | + | chr7_4:59042558-59042577 | Msa1166890:three_prime_UTR | 30.0% | |
| GAAAACATTGAAGCAATCAA+AGG | - | chr7_4:59042698-59042717 | None:intergenic | 30.0% | |
| ! | TGTTTTCACTAGCTAAGAAA+TGG | + | chr7_4:59042711-59042730 | Msa1166890:three_prime_UTR | 30.0% |
| TAAGACTGTCTATAGAAGCT+TGG | - | chr7_4:59039867-59039886 | None:intergenic | 35.0% | |
| !! | TGTAATCAGATTGCTGACTT+TGG | - | chr7_4:59039938-59039957 | None:intergenic | 35.0% |
| !! | GTTTGTGAGGGTTTTTGTTT+CGG | - | chr7_4:59040041-59040060 | None:intergenic | 35.0% |
| ! | TAATGGAAGAAATGGGGTTT+TGG | - | chr7_4:59040071-59040090 | None:intergenic | 35.0% |
| TTGAAATAGAGATTGCCCAA+GGG | - | chr7_4:59040198-59040217 | None:intergenic | 35.0% | |
| ATTGAAATAGAGATTGCCCA+AGG | - | chr7_4:59040199-59040218 | None:intergenic | 35.0% | |
| ! | GAGCTTGTTCTTGATATTCT+AGG | + | chr7_4:59040276-59040295 | Msa1166890:CDS | 35.0% |
| ! | TGGTAATAGTTTAGGGGTTT+TGG | + | chr7_4:59040308-59040327 | Msa1166890:CDS | 35.0% |
| ! | GTGTTGGAGAATTTTGTTGA+TGG | + | chr7_4:59040390-59040409 | Msa1166890:CDS | 35.0% |
| !! | GTTGATGGGTTTCAGTATAA+TGG | + | chr7_4:59040405-59040424 | Msa1166890:CDS | 35.0% |
| GTACCCATTAGAAACAACAA+AGG | - | chr7_4:59040445-59040464 | None:intergenic | 35.0% | |
| !!! | CGGATTATCTTTTTCAGAGT+TGG | + | chr7_4:59040520-59040539 | Msa1166890:CDS | 35.0% |
| TGAAATGAAAGGTGAATGGT+TGG | + | chr7_4:59040557-59040576 | Msa1166890:CDS | 35.0% | |
| TGGAGAGGGATAATATTGTT+AGG | + | chr7_4:59040577-59040596 | Msa1166890:CDS | 35.0% | |
| !! | TTTTGAGGAGGTTAATAAGC+CGG | + | chr7_4:59040635-59040654 | Msa1166890:CDS | 35.0% |
| ! | TGGAAGGGTGTATTGATAAT+TGG | + | chr7_4:59040664-59040683 | Msa1166890:CDS | 35.0% |
| ! | GGAAGGGTGTATTGATAATT+GGG | + | chr7_4:59040665-59040684 | Msa1166890:CDS | 35.0% |
| ! | TTGATAATTGGGATGCATTG+AGG | + | chr7_4:59040676-59040695 | Msa1166890:CDS | 35.0% |
| ! | GATGATGTTAAGTTTTCGGT+TGG | + | chr7_4:59040735-59040754 | Msa1166890:CDS | 35.0% |
| CAGATCAAGTTAGAGAAGAA+AGG | + | chr7_4:59040796-59040815 | Msa1166890:CDS | 35.0% | |
| TGCTGAAAAAGTTCCGAAAT+TGG | + | chr7_4:59040845-59040864 | Msa1166890:CDS | 35.0% | |
| GCTGAAAAAGTTCCGAAATT+GGG | + | chr7_4:59040846-59040865 | Msa1166890:CDS | 35.0% | |
| AAAAGTTCCGAAATTGGGTT+TGG | + | chr7_4:59040851-59040870 | Msa1166890:CDS | 35.0% | |
| ! | ATGAAGTTCCGGTGTATTTT+CGG | + | chr7_4:59040877-59040896 | Msa1166890:CDS | 35.0% |
| !! | TATTTTCGGGAGGATTTGTT+TGG | + | chr7_4:59040891-59040910 | Msa1166890:CDS | 35.0% |
| !!! | GAGGATTTGTTTGGTGTTTT+GGG | + | chr7_4:59040900-59040919 | Msa1166890:CDS | 35.0% |
| GAAATGAGAGACCTGATTAT+AGG | + | chr7_4:59040922-59040941 | Msa1166890:CDS | 35.0% | |
| ATCCAAATTCAACTTCAGCT+TGG | + | chr7_4:59040991-59041010 | Msa1166890:CDS | 35.0% | |
| TTCCAAGCTGAAGTTGAATT+TGG | - | chr7_4:59040996-59041015 | None:intergenic | 35.0% | |
| GCTTTACATATGCACTCAAT+TGG | - | chr7_4:59041179-59041198 | None:intergenic | 35.0% | |
| ATTGAGTGCATATGTAAAGC+GGG | + | chr7_4:59041179-59041198 | Msa1166890:CDS | 35.0% | |
| ! | GCTAACATAGTTCTGTGTTA+TGG | - | chr7_4:59041267-59041286 | None:intergenic | 35.0% |
| TAACACAGAACTATGTTAGC+AGG | + | chr7_4:59041267-59041286 | Msa1166890:CDS | 35.0% | |
| GAAATTCATTGAAGCTGCAA+TGG | - | chr7_4:59041657-59041676 | None:intergenic | 35.0% | |
| !!! | TTTTGAAATGAATACGAGGG+AGG | + | chr7_4:59041685-59041704 | Msa1166890:intron | 35.0% |
| GTTTAGTGACCTTGAGATAT+TGG | + | chr7_4:59041762-59041781 | Msa1166890:intron | 35.0% | |
| GATTATGTGATTCCTAGAAG+GGG | - | chr7_4:59041811-59041830 | None:intergenic | 35.0% | |
| GGATTATGTGATTCCTAGAA+GGG | - | chr7_4:59041812-59041831 | None:intergenic | 35.0% | |
| AGGATTATGTGATTCCTAGA+AGG | - | chr7_4:59041813-59041832 | None:intergenic | 35.0% | |
| TAGGAATCACATAATCCTGA+TGG | + | chr7_4:59041815-59041834 | Msa1166890:intron | 35.0% | |
| ! | TTTTAGCAAAAGCTGCACTT+TGG | - | chr7_4:59041954-59041973 | None:intergenic | 35.0% |
| !! | ATTTGGATTGGCAGTGAATT+CGG | - | chr7_4:59041999-59042018 | None:intergenic | 35.0% |
| ACTGCCAATCCAAATATGAT+CGG | + | chr7_4:59042004-59042023 | Msa1166890:intron | 35.0% | |
| TTAGCCGATCATATTTGGAT+TGG | - | chr7_4:59042011-59042030 | None:intergenic | 35.0% | |
| ATCATATCACATGCGCTTAT+CGG | - | chr7_4:59042066-59042085 | None:intergenic | 35.0% | |
| ACTTATTGGAATCCATGGAA+CGG | + | chr7_4:59042132-59042151 | Msa1166890:intron | 35.0% | |
| ACTTTAACCTCAAACGTTAG+CGG | + | chr7_4:59042254-59042273 | Msa1166890:intron | 35.0% | |
| AAGAGAAAAAGATCCAGCAA+AGG | + | chr7_4:59042444-59042463 | Msa1166890:CDS | 35.0% | |
| TCTATAATCAGCCGCAAATT+TGG | - | chr7_4:59042572-59042591 | None:intergenic | 35.0% | |
| CAGAAATCCAATTGCATATG+TGG | + | chr7_4:59042654-59042673 | Msa1166890:three_prime_UTR | 35.0% | |
| CAAAGGAACACTAGACTTTA+GGG | - | chr7_4:59042681-59042700 | None:intergenic | 35.0% | |
| TCAAAGGAACACTAGACTTT+AGG | - | chr7_4:59042682-59042701 | None:intergenic | 35.0% | |
| !! | TTGCTGACTTTGGTTTGGTA+TGG | - | chr7_4:59039928-59039947 | None:intergenic | 40.0% |
| !! | TCAGATTGCTGACTTTGGTT+TGG | - | chr7_4:59039933-59039952 | None:intergenic | 40.0% |
| GGCAATCTCTATTTCAATCC+AGG | + | chr7_4:59040201-59040220 | Msa1166890:CDS | 40.0% | |
| ATTACCTAAACCAGTGTCTC+TGG | - | chr7_4:59040238-59040257 | None:intergenic | 40.0% | |
| AAGAACAAGCTCATCAGTGA+GGG | - | chr7_4:59040268-59040287 | None:intergenic | 40.0% | |
| TCACTAATCATGAACCCCTT+TGG | + | chr7_4:59040358-59040377 | Msa1166890:CDS | 40.0% | |
| AACACAAGATTCCTCCAAAG+GGG | - | chr7_4:59040375-59040394 | None:intergenic | 40.0% | |
| CAACACAAGATTCCTCCAAA+GGG | - | chr7_4:59040376-59040395 | None:intergenic | 40.0% | |
| !! | GGTTTCAGTATAATGGGTCA+TGG | + | chr7_4:59040412-59040431 | Msa1166890:CDS | 40.0% |
| ! | GGGTACCCTTTGTTTGATAT+CGG | + | chr7_4:59040459-59040478 | Msa1166890:CDS | 40.0% |
| ! | GGTACCCTTTGTTTGATATC+GGG | + | chr7_4:59040460-59040479 | Msa1166890:CDS | 40.0% |
| CACTCCCGATATCAAACAAA+GGG | - | chr7_4:59040467-59040486 | None:intergenic | 40.0% | |
| TGTTAGGAAGAGAGGGATTT+CGG | + | chr7_4:59040593-59040612 | Msa1166890:CDS | 40.0% | |
| ATTGGGATGCATTGAGGAAT+TGG | + | chr7_4:59040682-59040701 | Msa1166890:CDS | 40.0% | |
| TTGGGATGCATTGAGGAATT+GGG | + | chr7_4:59040683-59040702 | Msa1166890:CDS | 40.0% | |
| ! | GGGTTTGGAATATGAAGTTC+CGG | + | chr7_4:59040866-59040885 | Msa1166890:CDS | 40.0% |
| ! | TGAAGTTCCGGTGTATTTTC+GGG | + | chr7_4:59040878-59040897 | Msa1166890:CDS | 40.0% |
| AAATCCTCCCGAAAATACAC+CGG | - | chr7_4:59040888-59040907 | None:intergenic | 40.0% | |
| !!! | GGAGGATTTGTTTGGTGTTT+TGG | + | chr7_4:59040899-59040918 | Msa1166890:CDS | 40.0% |
| ATGAGAGACCTGATTATAGG+TGG | + | chr7_4:59040925-59040944 | Msa1166890:CDS | 40.0% | |
| TGGATTATTATTGGACCAGC+TGG | + | chr7_4:59040945-59040964 | Msa1166890:CDS | 40.0% | |
| GGATTATTATTGGACCAGCT+GGG | + | chr7_4:59040946-59040965 | Msa1166890:CDS | 40.0% | |
| TTGAGTGCATATGTAAAGCG+GGG | + | chr7_4:59041180-59041199 | Msa1166890:CDS | 40.0% | |
| ! | TTATGGCAATTGATTCCTCC+AGG | - | chr7_4:59041250-59041269 | None:intergenic | 40.0% |
| TCGGATGTTAAAACATCCCT+TGG | + | chr7_4:59041481-59041500 | Msa1166890:intron | 40.0% | |
| TATATGTATCCCTACTCCCT+AGG | + | chr7_4:59041714-59041733 | Msa1166890:intron | 40.0% | |
| TCAGTGAGCTATTGTACCTA+GGG | - | chr7_4:59041733-59041752 | None:intergenic | 40.0% | |
| ATCAGTGAGCTATTGTACCT+AGG | - | chr7_4:59041734-59041753 | None:intergenic | 40.0% | |
| AATATAACGAGTCCGTTCCA+TGG | - | chr7_4:59042147-59042166 | None:intergenic | 40.0% | |
| GTGTCTTGGAGTTTCTTAAG+AGG | + | chr7_4:59042303-59042322 | Msa1166890:CDS | 40.0% | |
| AGAAGGAAAGTTTCCTTTGC+TGG | - | chr7_4:59042460-59042479 | None:intergenic | 40.0% | |
| AGCAAAGGAAACTTTCCTTC+TGG | + | chr7_4:59042459-59042478 | Msa1166890:CDS | 40.0% | |
| GCAAAGGAAACTTTCCTTCT+GGG | + | chr7_4:59042460-59042479 | Msa1166890:CDS | 40.0% | |
| TTAGGGTCCACATATGCAAT+TGG | - | chr7_4:59042664-59042683 | None:intergenic | 40.0% | |
| !! | CTGACTTTGGTTTGGTATGG+TGG | - | chr7_4:59039925-59039944 | None:intergenic | 45.0% |
| CTTCTTCAACGAGAGATGAG+TGG | - | chr7_4:59040101-59040120 | None:intergenic | 45.0% | |
| !! | AACTCCAGAGACACTGGTTT+AGG | + | chr7_4:59040231-59040250 | Msa1166890:CDS | 45.0% |
| CAAGAACAAGCTCATCAGTG+AGG | - | chr7_4:59040269-59040288 | None:intergenic | 45.0% | |
| CTAATCATGAACCCCTTTGG+AGG | + | chr7_4:59040361-59040380 | Msa1166890:CDS | 45.0% | |
| CCAACACAAGATTCCTCCAA+AGG | - | chr7_4:59040377-59040396 | None:intergenic | 45.0% | |
| ! | CCTTTGGAGGAATCTTGTGT+TGG | + | chr7_4:59040374-59040393 | Msa1166890:CDS | 45.0% |
| CCACTCCCGATATCAAACAA+AGG | - | chr7_4:59040468-59040487 | None:intergenic | 45.0% | |
| ! | CCTTTGTTTGATATCGGGAG+TGG | + | chr7_4:59040465-59040484 | Msa1166890:CDS | 45.0% |
| TGAAAGGTGAATGGTTGGAG+AGG | + | chr7_4:59040562-59040581 | Msa1166890:CDS | 45.0% | |
| GAAAGGTGAATGGTTGGAGA+GGG | + | chr7_4:59040563-59040582 | Msa1166890:CDS | 45.0% | |
| GATTTCGGTTGAGGAGTTTG+TGG | + | chr7_4:59040608-59040627 | Msa1166890:CDS | 45.0% | |
| ! | GGAGTTTGTGGCGAATTTTG+AGG | + | chr7_4:59040620-59040639 | Msa1166890:CDS | 45.0% |
| !! | GTTTGTGGCGAATTTTGAGG+AGG | + | chr7_4:59040623-59040642 | Msa1166890:CDS | 45.0% |
| !! | GGTTAATAAGCCGGTGTTGT+TGG | + | chr7_4:59040644-59040663 | Msa1166890:CDS | 45.0% |
| !! | AATAAGCCGGTGTTGTTGGA+AGG | + | chr7_4:59040648-59040667 | Msa1166890:CDS | 45.0% |
| !! | ATAAGCCGGTGTTGTTGGAA+GGG | + | chr7_4:59040649-59040668 | Msa1166890:CDS | 45.0% |
| ATACACCCTTCCAACAACAC+CGG | - | chr7_4:59040657-59040676 | None:intergenic | 45.0% | |
| TCCTTAAGCTTCATCTCCAC+AGG | - | chr7_4:59040762-59040781 | None:intergenic | 45.0% | |
| AGCTTGGAATGCTGTGATCA+AGG | + | chr7_4:59041007-59041026 | Msa1166890:CDS | 45.0% | |
| GCTTGGAATGCTGTGATCAA+GGG | + | chr7_4:59041008-59041027 | Msa1166890:CDS | 45.0% | |
| CTTGGAATGCTGTGATCAAG+GGG | + | chr7_4:59041009-59041028 | Msa1166890:CDS | 45.0% | |
| TGATCAAGGGGTCGAAGAAA+TGG | + | chr7_4:59041021-59041040 | Msa1166890:CDS | 45.0% | |
| GATCAAGGGGTCGAAGAAAT+GGG | + | chr7_4:59041022-59041041 | Msa1166890:CDS | 45.0% | |
| TGAGTGCATATGTAAAGCGG+GGG | + | chr7_4:59041181-59041200 | Msa1166890:CDS | 45.0% | |
| TTATCTTTGTGCCCAGTGGT+TGG | + | chr7_4:59041207-59041226 | Msa1166890:CDS | 45.0% | |
| TCCCTTGGCATCTCAAAATC+TGG | + | chr7_4:59041496-59041515 | Msa1166890:intron | 45.0% | |
| !!! | GCCAGATTTTGAGATGCCAA+GGG | - | chr7_4:59041500-59041519 | None:intergenic | 45.0% |
| !!! | AGCCAGATTTTGAGATGCCA+AGG | - | chr7_4:59041501-59041520 | None:intergenic | 45.0% |
| GCTATTGTACCTAGGGAGTA+GGG | - | chr7_4:59041726-59041745 | None:intergenic | 45.0% | |
| AGCTATTGTACCTAGGGAGT+AGG | - | chr7_4:59041727-59041746 | None:intergenic | 45.0% | |
| ! | ACAAGTACCGCTAACGTTTG+AGG | - | chr7_4:59042264-59042283 | None:intergenic | 45.0% |
| ! | ACGTTAGCGGTACTTGTTAC+AGG | + | chr7_4:59042267-59042286 | Msa1166890:intron | 45.0% |
| ! | CACACTGGTATCTGGAACAA+AGG | + | chr7_4:59042337-59042356 | Msa1166890:CDS | 45.0% |
| ! | GCTATTGAGGCTTCTTTTCC+TGG | + | chr7_4:59042392-59042411 | Msa1166890:CDS | 45.0% |
| GTCAGTTCATCAATTGCTCC+AGG | - | chr7_4:59042413-59042432 | None:intergenic | 45.0% | |
| !! | CTTTGGTTTGGTATGGTGGC+TGG | - | chr7_4:59039921-59039940 | None:intergenic | 50.0% |
| !! | TCTCTGGAGTTGATGGAACC+TGG | - | chr7_4:59040222-59040241 | None:intergenic | 50.0% |
| TCCATCAACTCCAGAGACAC+TGG | + | chr7_4:59040225-59040244 | Msa1166890:CDS | 50.0% | |
| !! | ACCAGTGTCTCTGGAGTTGA+TGG | - | chr7_4:59040229-59040248 | None:intergenic | 50.0% |
| TTGATATCGGGAGTGGCGTT+CGG | + | chr7_4:59040472-59040491 | Msa1166890:CDS | 50.0% | |
| GAAGAGAGGGATTTCGGTTG+AGG | + | chr7_4:59040599-59040618 | Msa1166890:CDS | 50.0% | |
| ! | TAAGTTTTCGGTTGGGCCTG+TGG | + | chr7_4:59040743-59040762 | Msa1166890:CDS | 50.0% |
| GCCTGTGGAGATGAAGCTTA+AGG | + | chr7_4:59040758-59040777 | Msa1166890:CDS | 50.0% | |
| !! | AGTTCCGGTGTATTTTCGGG+AGG | + | chr7_4:59040881-59040900 | Msa1166890:CDS | 50.0% |
| ATTATTGGACCAGCTGGGTC+TGG | + | chr7_4:59040951-59040970 | Msa1166890:CDS | 50.0% | |
| AACACCGGGCGGAATAACAT+CGG | - | chr7_4:59041060-59041079 | None:intergenic | 50.0% | |
| ATCAGGGCTAGGATGAACAC+CGG | - | chr7_4:59041075-59041094 | None:intergenic | 50.0% | |
| ATGCTACCTCTGCACCATCA+GGG | - | chr7_4:59041091-59041110 | None:intergenic | 50.0% | |
| GAGGTTATCTTTGTGCCCAG+TGG | + | chr7_4:59041203-59041222 | Msa1166890:CDS | 50.0% | |
| ACCAAATGCCACCAACCACT+GGG | - | chr7_4:59041221-59041240 | None:intergenic | 50.0% | |
| ! | GTGGCATTTGGTGATCAACC+TGG | + | chr7_4:59041229-59041248 | Msa1166890:CDS | 50.0% |
| ! | GCATTTGGTGATCAACCTGG+AGG | + | chr7_4:59041232-59041251 | Msa1166890:CDS | 50.0% |
| !! | CTGGCTCTTTAGAGTGTCCT+TGG | + | chr7_4:59041515-59041534 | Msa1166890:intron | 50.0% |
| TCATTGAAGCTGCAATGGCG+TGG | - | chr7_4:59041652-59041671 | None:intergenic | 50.0% | |
| AGGTTCGCGCCAATATCTCA+AGG | - | chr7_4:59041774-59041793 | None:intergenic | 50.0% | |
| GTAGAATCAGTGTGTCGCAC+TGG | - | chr7_4:59041977-59041996 | None:intergenic | 50.0% | |
| GATACCAGTGTGCTTGCGTT+CGG | - | chr7_4:59042329-59042348 | None:intergenic | 50.0% | |
| AACGCAAGCACACTGGTATC+TGG | + | chr7_4:59042329-59042348 | Msa1166890:CDS | 50.0% | |
| GTCTGCAACAGAATCCCAGA+AGG | - | chr7_4:59042477-59042496 | None:intergenic | 50.0% | |
| TTCTGTTGCAGACACCAGAG+TGG | + | chr7_4:59042484-59042503 | Msa1166890:CDS | 50.0% | |
| TCTGTTGCAGACACCAGAGT+GGG | + | chr7_4:59042485-59042504 | Msa1166890:CDS | 50.0% | |
| GAACTTGAAAGCTCCCACTC+TGG | - | chr7_4:59042501-59042520 | None:intergenic | 50.0% | |
| TTGGTATGGTGGCTGGACTC+TGG | - | chr7_4:59039914-59039933 | None:intergenic | 55.0% | |
| TGAACACCGTGGGTGTGTGA+CGG | - | chr7_4:59040174-59040193 | None:intergenic | 55.0% | |
| AAAGACGATCCAGACCCAGC+TGG | - | chr7_4:59040963-59040982 | None:intergenic | 55.0% | |
| ACACCGGGCGGAATAACATC+GGG | - | chr7_4:59041059-59041078 | None:intergenic | 55.0% | |
| TCAGGGCTAGGATGAACACC+GGG | - | chr7_4:59041074-59041093 | None:intergenic | 55.0% | |
| GGTGTTCATCCTAGCCCTGA+TGG | + | chr7_4:59041074-59041093 | Msa1166890:CDS | 55.0% | |
| GATGCTACCTCTGCACCATC+AGG | - | chr7_4:59041092-59041111 | None:intergenic | 55.0% | |
| GTGCATATGTAAAGCGGGGG+AGG | + | chr7_4:59041184-59041203 | Msa1166890:CDS | 55.0% | |
| TCTTTGTGCCCAGTGGTTGG+TGG | + | chr7_4:59041210-59041229 | Msa1166890:CDS | 55.0% | |
| CACCAAATGCCACCAACCAC+TGG | - | chr7_4:59041222-59041241 | None:intergenic | 55.0% | |
| GGCGCGAACCTTCACAAAGT+CGG | + | chr7_4:59041783-59041802 | Msa1166890:intron | 55.0% | |
| AAGGGGCTCCGACTTTGTGA+AGG | - | chr7_4:59041794-59041813 | None:intergenic | 55.0% | |
| ACAAAGTCGGAGCCCCTTCT+AGG | + | chr7_4:59041796-59041815 | Msa1166890:intron | 55.0% | |
| GTATGGTGGCTGGACTCTGG+AGG | - | chr7_4:59039911-59039930 | None:intergenic | 60.0% | |
| AACACCGTGGGTGTGTGACG+GGG | - | chr7_4:59040172-59040191 | None:intergenic | 60.0% | |
| GAACACCGTGGGTGTGTGAC+GGG | - | chr7_4:59040173-59040192 | None:intergenic | 60.0% | |
| ACCCACGGTGTTCAGCCCTT+GGG | + | chr7_4:59040180-59040199 | Msa1166890:CDS | 60.0% | |
| CCTCCCGATGTTATTCCGCC+CGG | + | chr7_4:59041053-59041072 | Msa1166890:CDS | 60.0% | |
| ! | TCCTAGCCCTGATGGTGCAG+AGG | + | chr7_4:59041082-59041101 | Msa1166890:CDS | 60.0% |
| ACCTCTGCACCATCAGGGCT+AGG | - | chr7_4:59041086-59041105 | None:intergenic | 60.0% | |
| !! | GCCCAGTGGTTGGTGGCATT+TGG | + | chr7_4:59041217-59041236 | Msa1166890:CDS | 60.0% |
| TCTGCCCCGTCACACACCCA+CGG | + | chr7_4:59040165-59040184 | Msa1166890:CDS | 65.0% | |
| CACCCACGGTGTTCAGCCCT+TGG | + | chr7_4:59040179-59040198 | Msa1166890:CDS | 65.0% | |
| GCCCAAGGGCTGAACACCGT+GGG | - | chr7_4:59040184-59040203 | None:intergenic | 65.0% | |
| TGCCCAAGGGCTGAACACCG+TGG | - | chr7_4:59040185-59040204 | None:intergenic | 65.0% | |
| CCGGGCGGAATAACATCGGG+AGG | - | chr7_4:59041056-59041075 | None:intergenic | 65.0% | |
| GGGCTAGGATGAACACCGGG+CGG | - | chr7_4:59041071-59041090 | None:intergenic | 65.0% | |
| GAGGCCGAACGCAAGCACAC+TGG | + | chr7_4:59042322-59042341 | Msa1166890:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 59039821 | 59042841 | 59039821 | ID=Msa1166890;Name=Msa1166890 |
| chr7_4 | mRNA | 59039821 | 59042841 | 59039821 | ID=Msa1166890-mRNA-1;Parent=Msa1166890;Name=Msa1166890-mRNA-1;_AED=0.03;_eAED=0.03;_QI=143|1|1|1|1|1|2|312|521 |
| chr7_4 | exon | 59039821 | 59041288 | 59039821 | ID=Msa1166890-mRNA-1:exon:18236;Parent=Msa1166890-mRNA-1 |
| chr7_4 | exon | 59042289 | 59042841 | 59042289 | ID=Msa1166890-mRNA-1:exon:18237;Parent=Msa1166890-mRNA-1 |
| chr7_4 | five_prime_UTR | 59039821 | 59039963 | 59039821 | ID=Msa1166890-mRNA-1:five_prime_utr;Parent=Msa1166890-mRNA-1 |
| chr7_4 | CDS | 59039964 | 59041288 | 59039964 | ID=Msa1166890-mRNA-1:cds;Parent=Msa1166890-mRNA-1 |
| chr7_4 | CDS | 59042289 | 59042529 | 59042289 | ID=Msa1166890-mRNA-1:cds;Parent=Msa1166890-mRNA-1 |
| chr7_4 | three_prime_UTR | 59042530 | 59042841 | 59042530 | ID=Msa1166890-mRNA-1:three_prime_utr;Parent=Msa1166890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
