AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1127160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127160 MtrunA17_Chr7g0268691 96.237 372 14 0 1 372 1 372 0.0 742
Msa1127160 MtrunA17_Chr1g0150471 28.490 351 190 13 20 369 6 296 1.07e-30 119
Msa1127160 MtrunA17_Chr3g0120711 50.000 100 50 0 20 119 5 104 1.31e-29 118
Msa1127160 MtrunA17_Chr3g0120711 55.000 60 24 1 310 369 339 395 5.22e-12 66.6
Msa1127160 MtrunA17_Chr7g0251781 45.255 137 57 4 19 148 4 129 5.72e-29 115
Msa1127160 MtrunA17_Chr7g0251781 46.914 81 42 1 290 369 302 382 7.23e-14 72.4
Msa1127160 MtrunA17_Chr5g0429341 48.515 101 51 1 20 119 5 105 9.42e-29 115
Msa1127160 MtrunA17_Chr2g0322941 45.000 100 54 1 20 119 44 142 1.01e-21 92.8
Msa1127160 MtrunA17_Chr1g0209071 37.736 106 64 1 18 123 3 106 2.31e-20 90.9
Msa1127160 MtrunA17_Chr7g0220721 36.283 113 64 3 18 126 24 132 1.33e-18 86.7
Msa1127160 MtrunA17_Chr3g0136701 40.449 89 52 1 20 107 6 94 1.12e-17 82.4
Msa1127160 MtrunA17_Chr4g0072871 40.449 89 52 1 20 107 22 110 1.34e-17 83.6
Msa1127160 MtrunA17_Chr4g0072871 41.176 68 40 0 302 369 272 339 2.55e-11 64.7
Msa1127160 MtrunA17_Chr4g0033641 43.478 92 42 2 20 101 5 96 9.31e-16 76.3
Msa1127160 MtrunA17_Chr1g0155811 35.354 99 53 2 20 107 5 103 1.33e-13 70.5
Msa1127160 MtrunA17_Chr5g0405151 38.750 80 41 1 20 91 5 84 2.23e-13 68.2
Msa1127160 MtrunA17_Chr2g0329511 39.796 98 49 2 20 107 5 102 3.51e-13 68.6
Msa1127160 MtrunA17_Chr2g0322951 63.636 44 16 0 326 369 90 133 5.43e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127160 AT2G47890.1 46.281 363 147 9 14 369 7 328 1.11e-95 288
Msa1127160 AT2G47890.3 42.433 337 146 9 14 343 7 302 1.32e-76 239
Msa1127160 AT2G47890.2 48.718 234 95 4 14 246 7 216 5.90e-72 224
Msa1127160 AT3G07650.3 30.053 376 213 12 20 369 5 356 5.98e-37 137
Msa1127160 AT3G07650.2 30.053 376 213 12 20 369 5 356 5.98e-37 137
Msa1127160 AT3G07650.4 30.053 376 213 12 20 369 5 356 5.98e-37 137
Msa1127160 AT3G07650.1 30.053 376 213 12 20 369 5 356 5.98e-37 137
Msa1127160 AT1G28050.1 35.897 195 103 6 19 209 8 184 3.93e-34 131
Msa1127160 AT1G28050.1 50.725 69 33 1 302 369 358 426 4.45e-13 70.5
Msa1127160 AT2G33500.2 51.351 111 53 1 19 128 11 121 1.79e-33 129
Msa1127160 AT2G33500.2 41.525 118 60 3 258 369 283 397 1.13e-15 78.2
Msa1127160 AT2G33500.1 51.351 111 53 1 19 128 11 121 1.83e-33 129
Msa1127160 AT2G33500.1 39.831 118 63 2 258 369 283 398 1.99e-15 77.4
Msa1127160 AT3G21880.3 31.165 369 210 13 20 369 9 352 4.34e-33 127
Msa1127160 AT3G21880.2 31.165 369 210 13 20 369 9 352 4.34e-33 127
Msa1127160 AT3G21880.1 31.165 369 210 13 20 369 5 348 5.27e-33 127
Msa1127160 AT5G48250.1 46.226 106 54 1 20 122 5 110 9.00e-29 115
Msa1127160 AT4G15250.1 42.000 100 57 1 20 119 5 103 2.18e-20 91.3
Msa1127160 AT1G68190.1 38.679 106 64 1 18 123 12 116 2.19e-20 91.7
Msa1127160 AT1G68190.3 38.679 106 64 1 18 123 12 116 2.19e-20 91.7
Msa1127160 AT1G68190.2 38.679 106 64 1 18 123 41 145 2.49e-20 92.0
Msa1127160 AT5G15840.1 43.011 93 52 1 18 109 18 110 8.53e-20 90.1
Msa1127160 AT5G15840.2 43.011 93 52 1 18 109 18 110 1.79e-19 87.8
Msa1127160 AT5G24930.1 40.449 89 52 1 20 107 6 94 4.18e-18 85.1
Msa1127160 AT5G24930.1 52.632 57 23 1 313 369 284 336 9.38e-11 63.2
Msa1127160 AT5G15850.1 42.045 88 50 1 18 104 10 97 4.24e-18 85.1
Msa1127160 AT5G15850.1 35.075 134 66 5 252 369 199 327 2.14e-11 65.1
Msa1127160 AT3G02380.1 40.000 95 56 1 11 104 7 101 5.54e-18 84.7
Msa1127160 AT3G02380.1 60.417 48 19 0 322 369 272 319 2.45e-11 64.7
Msa1127160 AT2G24790.1 39.560 91 54 1 18 107 6 96 5.97e-18 83.6
Msa1127160 AT2G24790.2 39.560 91 54 1 18 107 6 96 7.80e-18 82.0
Msa1127160 AT5G57660.1 39.560 91 50 2 18 107 20 106 1.53e-17 83.6
Msa1127160 AT4G38960.1 40.000 80 40 1 20 91 5 84 6.90e-13 67.0
Msa1127160 AT4G38960.6 40.000 80 40 1 20 91 5 84 6.90e-13 67.0
Msa1127160 AT2G21320.1 38.750 80 41 1 20 91 5 84 2.78e-12 65.1
Msa1127160 AT1G75540.1 35.000 100 52 2 20 106 5 104 4.15e-12 67.0
Msa1127160 AT2G31380.1 36.170 94 51 1 20 104 5 98 1.40e-11 64.3
Msa1127160 AT1G06040.1 35.106 94 52 1 20 104 5 98 9.44e-11 62.0

Find 127 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGATATATCACTCTGATTT+TGG 0.166869 7_3:+78672140 Msa1127160:three_prime_UTR
TAAATAGTCATAATATTTAT+TGG 0.170269 7_3:-78672092 None:intergenic
CATGTGACTCATTCATTTCT+TGG 0.181063 7_3:-78669031 None:intergenic
CCATGTAAAGTTGTAGTTCT+AGG 0.239739 7_3:+78672261 Msa1127160:three_prime_UTR
GGGTTAGGGTTAGGGTTTCT+AGG 0.248419 7_3:-78669175 None:intergenic
CAGTTTCTTATATTATATTA+TGG 0.248631 7_3:+78671927 Msa1127160:intron
TTGTGTGAAGGGTTAGGGTT+AGG 0.274503 7_3:-78669184 None:intergenic
ATTATGACTATTTAGTTTAT+CGG 0.286559 7_3:+78672101 Msa1127160:three_prime_UTR
ATCGCATGAATCACAGATTA+AGG 0.318847 7_3:-78669341 None:intergenic
ATTCTGGGTTTGCAGGATAT+TGG 0.319782 7_3:+78669517 Msa1127160:CDS
TATGGAGAAGGAACGGCTTT+AGG 0.323731 7_3:-78670881 None:intergenic
AAATAGTCATAATATTTATT+GGG 0.324041 7_3:-78672091 None:intergenic
GACTGTCTGATATGTTTGTT+TGG 0.326886 7_3:+78669605 Msa1127160:CDS
GGTTAGGTGGAATGAGGATA+TGG 0.336947 7_3:-78669083 None:intergenic
ACAGATATGACAAGCATATA+AGG 0.340161 7_3:+78671452 Msa1127160:intron
TCTTGACTTGCTAACTCATA+TGG 0.342545 7_3:-78670899 None:intergenic
ATAGTACATGATTGTAAATT+CGG 0.343940 7_3:-78672221 None:intergenic
AATAGTTTGTGTGAAGGGTT+AGG 0.348641 7_3:-78669190 None:intergenic
GCCGGTGGTATATACTCTTC+AGG 0.353812 7_3:-78670231 None:intergenic
TGTGTGAAGGGTTAGGGTTA+GGG 0.355224 7_3:-78669183 None:intergenic
GAGAGTGGCAAAAGAGGATT+TGG 0.355929 7_3:-78669054 None:intergenic
AGTGTAGGAGATGGGTTTGT+TGG 0.360731 7_3:+78669568 Msa1127160:CDS
TATATACTCTTCAGGATCAT+AGG 0.367421 7_3:-78670223 None:intergenic
ATGATTTCAGTGCTCTATCT+TGG 0.379435 7_3:-78671530 None:intergenic
GGAGAGCAGGACAAGAGTTA+AGG 0.397226 7_3:+78671498 Msa1127160:CDS
AAACATTCTGTATCTTCTGC+TGG 0.403504 7_3:+78670746 Msa1127160:CDS
CTTAGAGAAGAGTTGATTTG+TGG 0.405751 7_3:-78669308 None:intergenic
TTTGTCGATTCTGGGTTTGC+AGG 0.409347 7_3:+78669510 Msa1127160:CDS
AGTTGTTGAAGTGAGGATAA+TGG 0.415599 7_3:-78668996 None:intergenic
GTGTAGGAGATGGGTTTGTT+GGG 0.419510 7_3:+78669569 Msa1127160:CDS
AAAGGGATTCTGCATTATTA+CGG 0.421974 7_3:+78670921 Msa1127160:CDS
AGAGAAAATGTGAGGAGAAA+AGG 0.424988 7_3:-78669104 None:intergenic
GCGTCCCTCCGTTGTTACAC+TGG 0.441856 7_3:-78670781 None:intergenic
GTATGAATCACGTAAAGTTC+GGG 0.445996 7_3:+78671474 Msa1127160:CDS
CCTAGAACTACAACTTTACA+TGG 0.447581 7_3:-78672261 None:intergenic
GGTATGAATCACGTAAAGTT+CGG 0.449433 7_3:+78671473 Msa1127160:CDS
CCACCGGCAAATTTATCTAC+AGG 0.455322 7_3:+78670246 Msa1127160:CDS
TTCTCATAATTATCGTGCTA+TGG 0.457659 7_3:+78669678 Msa1127160:CDS
AACATTCTGTATCTTCTGCT+GGG 0.457746 7_3:+78670747 Msa1127160:CDS
AAACCTGTAGATAAATTTGC+CGG 0.458844 7_3:-78670249 None:intergenic
GAGAGCAGGACAAGAGTTAA+GGG 0.458882 7_3:+78671499 Msa1127160:CDS
ACTGTCTGATATGTTTGTTT+GGG 0.461387 7_3:+78669606 Msa1127160:CDS
AGTGCTCTATCTTGGCAAAT+CGG 0.463266 7_3:-78671522 None:intergenic
ATTATATTATGGAGCACCTA+TGG 0.465673 7_3:+78671938 Msa1127160:three_prime_UTR
ATAGTTTGTGTGAAGGGTTA+GGG 0.471313 7_3:-78669189 None:intergenic
TCTTGAAGCTGTGGCTTGGA+AGG 0.471427 7_3:+78672025 Msa1127160:three_prime_UTR
CCGTTGTTACACTGGGTATG+AGG 0.476347 7_3:-78670773 None:intergenic
ATGTTTAAGTGAAATTTCTT+CGG 0.479598 7_3:-78670729 None:intergenic
GTCACAAGAGAAACAGAGTT+TGG 0.482714 7_3:-78669272 None:intergenic
TTTGAAGAGAGTGGCAAAAG+AGG 0.482855 7_3:-78669060 None:intergenic
CATGAACGAAGGCCTCTTGA+GGG 0.483331 7_3:+78669457 Msa1127160:CDS
AAGATAGAGCACTGAAATCA+TGG 0.483808 7_3:+78671532 Msa1127160:exon
AAATGTGAGGAGAAAAGGTT+AGG 0.495302 7_3:-78669099 None:intergenic
GCTTTGAATGATGTATCAAC+AGG 0.496442 7_3:-78670701 None:intergenic
ATGAGTTAGCAAGTCAAGAA+AGG 0.496861 7_3:+78670903 Msa1127160:CDS
TGATATTGTTTCTTCAAATG+AGG 0.499555 7_3:+78670290 Msa1127160:CDS
TTGTTCTTGAAGCTGTGGCT+TGG 0.502579 7_3:+78672021 Msa1127160:three_prime_UTR
GTAAAGTTCGGGCGGAGAGC+AGG 0.504523 7_3:+78671485 Msa1127160:CDS
GTCGAAATAGTTTGTGTGAA+GGG 0.509191 7_3:-78669195 None:intergenic
GCACGATAATTATGAGAAGA+AGG 0.510409 7_3:-78669673 None:intergenic
CTCAGGAAAGTGTAGGAGAT+GGG 0.521940 7_3:+78669560 Msa1127160:CDS
ATATACTCTTCAGGATCATA+GGG 0.522685 7_3:-78670222 None:intergenic
TCGTCAAGACTAACAAAAGA+AGG 0.524243 7_3:-78669634 None:intergenic
GTGAACCCTTGGATTGAAGT+TGG 0.528424 7_3:+78672341 Msa1127160:three_prime_UTR
AGAAAAGGTTAGGTGGAATG+AGG 0.531678 7_3:-78669089 None:intergenic
TGAGTTAGCAAGTCAAGAAA+GGG 0.532628 7_3:+78670904 Msa1127160:CDS
TTTGTTGGGTATGAGATTGA+AGG 0.533817 7_3:+78669583 Msa1127160:CDS
TGTAGTTGTTCTTGAAGCTG+TGG 0.541592 7_3:+78672016 Msa1127160:three_prime_UTR
TGGAGCACCTATGGTAGACT+TGG 0.545874 7_3:+78671947 Msa1127160:three_prime_UTR
CGTCCCTCCGTTGTTACACT+GGG 0.546187 7_3:-78670780 None:intergenic
TCATGAACGAAGGCCTCTTG+AGG 0.546653 7_3:+78669456 Msa1127160:CDS
CCTCAGGAAAGTGTAGGAGA+TGG 0.550053 7_3:+78669559 Msa1127160:CDS
GTTATTGAAACAGAATCGTA+AGG 0.552534 7_3:+78670137 Msa1127160:intron
GCTCATCCAACTTCAATCCA+AGG 0.554047 7_3:-78672347 None:intergenic
GGAGGTTCCTCCTTTGCCCA+AGG 0.554443 7_3:+78669699 Msa1127160:CDS
TTTCGACCTTGTGATTATTG+TGG 0.554518 7_3:+78669211 Msa1127160:CDS
CTGTGGCTTGGAAGGTGGCA+AGG 0.554784 7_3:+78672033 Msa1127160:three_prime_UTR
GTAGAACAGAGTATAGTAGC+AGG 0.559506 7_3:-78669370 None:intergenic
CTCTTAAACCACACCATGGG+TGG 0.560180 7_3:+78669148 Msa1127160:exon
AGGATATGGTTTGAAGAGAG+TGG 0.565322 7_3:-78669069 None:intergenic
GAGAGATGAGAGAAAATGTG+AGG 0.568388 7_3:-78669112 None:intergenic
ACAGGAACAACTTGATGCAT+AGG 0.575038 7_3:-78670683 None:intergenic
GACAAAAGCTCAGTAACTGA+AGG 0.575937 7_3:-78669493 None:intergenic
ATGAATTATACCTTGGGCAA+AGG 0.577881 7_3:-78669709 None:intergenic
AATTATACCTTGGGCAAAGG+AGG 0.579881 7_3:-78669706 None:intergenic
GGTCGAAATAGTTTGTGTGA+AGG 0.583503 7_3:-78669196 None:intergenic
GATTTGTGGAGTGAACTTCA+CGG 0.583624 7_3:-78669294 None:intergenic
TGTGAGGAGAAAAGGTTAGG+TGG 0.589856 7_3:-78669096 None:intergenic
TGAAGCTGTGGCTTGGAAGG+TGG 0.590327 7_3:+78672028 Msa1127160:three_prime_UTR
GCGTCCCTCCGTTGTTACAG+TGG 0.590695 7_3:-78670820 None:intergenic
CTCATCCAACTTCAATCCAA+GGG 0.592717 7_3:-78672346 None:intergenic
TAGGAGAACCACCCATGGTG+TGG 0.595775 7_3:-78669156 None:intergenic
TCTCTCAACCACTGTAACAA+CGG 0.600835 7_3:+78670812 Msa1127160:CDS
TCATAATTATCGTGCTATGG+AGG 0.601458 7_3:+78669681 Msa1127160:CDS
CTTGCTAACTCATATGGAGA+AGG 0.601483 7_3:-78670893 None:intergenic
CATGAGGTGAAGATAGTGAA+AGG 0.604807 7_3:-78669438 None:intergenic
TCAACCACTGTAACAACGGA+GGG 0.607091 7_3:+78670816 Msa1127160:CDS
AGGAGTCATATACTTCATCC+TGG 0.608350 7_3:+78672053 Msa1127160:three_prime_UTR
AGCAAAAGAAGAAAACAAGA+AGG 0.608996 7_3:+78670948 Msa1127160:CDS
GGAGCAGAAGTACATCAAGA+AGG 0.609884 7_3:+78671968 Msa1127160:three_prime_UTR
TCCTGAAGAGTATATACCAC+CGG 0.614465 7_3:+78670230 Msa1127160:CDS
TTCTGCTCCAAGTCTACCAT+AGG 0.619233 7_3:-78671954 None:intergenic
TCAAGAGGCCTTCGTTCATG+AGG 0.621272 7_3:-78669454 None:intergenic
CAGAATCGTAAGGCTGCTTG+TGG 0.621356 7_3:+78670147 Msa1127160:intron
CTCTCTCTTAAACCACACCA+TGG 0.624493 7_3:+78669144 Msa1127160:exon
TTTCTGTCAAAACTGTGACT+GGG 0.626975 7_3:+78669405 Msa1127160:CDS
ACATTCTGTATCTTCTGCTG+GGG 0.636591 7_3:+78670748 Msa1127160:CDS
ATACCCAGTGTAACAACGGA+GGG 0.637441 7_3:+78670777 Msa1127160:CDS
AAGCACAAGTTGTTGAAGTG+AGG 0.641309 7_3:-78669003 None:intergenic
GGCTTTAGGAGTAGTTGACA+AGG 0.642101 7_3:-78670867 None:intergenic
CACCCTGTAAAACCCTCAAG+AGG 0.645981 7_3:-78669469 None:intergenic
ACAAAAGCTCAGTAACTGAA+GGG 0.647464 7_3:-78669492 None:intergenic
TTGACAAAATCACAATGACA+CGG 0.648433 7_3:-78672193 None:intergenic
TCAGACTTGAGATACTCTGA+AGG 0.649177 7_3:-78670842 None:intergenic
CTCAACCACTGTAACAACGG+AGG 0.655253 7_3:+78670815 Msa1127160:CDS
TAACTCATATGGAGAAGGAA+CGG 0.655311 7_3:-78670888 None:intergenic
TCTCTCTTAAACCACACCAT+GGG 0.656520 7_3:+78669145 Msa1127160:exon
CCTGTAGATAAATTTGCCGG+TGG 0.659097 7_3:-78670246 None:intergenic
CCTCATACCCAGTGTAACAA+CGG 0.666009 7_3:+78670773 Msa1127160:CDS
CAGTGGTTGAGAGATTCTGA+AGG 0.668190 7_3:-78670803 None:intergenic
AGCACATTTATAAAACTCAG+AGG 0.678646 7_3:-78672288 None:intergenic
GAATTGCCACAATAATCACA+AGG 0.683272 7_3:-78669217 None:intergenic
TGAATCACGTAAAGTTCGGG+CGG 0.683457 7_3:+78671477 Msa1127160:CDS
CCATCTCCTACACTTTCCTG+AGG 0.685251 7_3:-78669559 None:intergenic
TATCTTCACCTCATGAACGA+AGG 0.697940 7_3:+78669446 Msa1127160:CDS
CATACCCAGTGTAACAACGG+AGG 0.713642 7_3:+78670776 Msa1127160:CDS
GTTTCTAGGAGAACCACCCA+TGG 0.721828 7_3:-78669161 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAGTCATAATATTTATT+GGG - chr7_3:78672094-78672113 None:intergenic 10.0%
!! TAAATAGTCATAATATTTAT+TGG - chr7_3:78672095-78672114 None:intergenic 10.0%
!! CTCAAATAAAATATATCAAA+AGG - chr7_3:78671156-78671175 None:intergenic 15.0%
!! GCATATATATAAATAAAATG+CGG - chr7_3:78671901-78671920 None:intergenic 15.0%
!! CAGTTTCTTATATTATATTA+TGG + chr7_3:78671927-78671946 Msa1127160:intron 15.0%
!!! ATTATGACTATTTAGTTTAT+CGG + chr7_3:78672101-78672120 Msa1127160:three_prime_UTR 15.0%
!! AATTTAAAAACAGAGAAAGA+AGG - chr7_3:78669748-78669767 None:intergenic 20.0%
!!! GAAATTCATTTTGTCTTTTT+AGG + chr7_3:78669776-78669795 Msa1127160:intron 20.0%
!!! ACATGATTAGTTTTTGTTTT+TGG + chr7_3:78669888-78669907 Msa1127160:intron 20.0%
!!! TAGTTTTTGTTTTTGGATTT+TGG + chr7_3:78669895-78669914 Msa1127160:intron 20.0%
!!! TTTTAATTCTCTGATTCTTA+GGG + chr7_3:78669973-78669992 Msa1127160:intron 20.0%
!! AAACATTAAAAGGTTGAAAA+TGG - chr7_3:78670393-78670412 None:intergenic 20.0%
!! ACACACAAATAAACATTAAA+AGG - chr7_3:78670403-78670422 None:intergenic 20.0%
!! ATGTTTAAGTGAAATTTCTT+CGG - chr7_3:78670732-78670751 None:intergenic 20.0%
!!! ATTTTATTTGAGAGATATCA+AGG + chr7_3:78671164-78671183 Msa1127160:intron 20.0%
!!! TGTTTTTCATGTAAATACAT+GGG - chr7_3:78671432-78671451 None:intergenic 20.0%
!!! TTGTTTTTCATGTAAATACA+TGG - chr7_3:78671433-78671452 None:intergenic 20.0%
!! ATAGTACATGATTGTAAATT+CGG - chr7_3:78672224-78672243 None:intergenic 20.0%
! TTATCCATGAATTATACCTT+GGG - chr7_3:78669718-78669737 None:intergenic 25.0%
! ATTATCCATGAATTATACCT+TGG - chr7_3:78669719-78669738 None:intergenic 25.0%
!!! GTTTTAATTCTCTGATTCTT+AGG + chr7_3:78669972-78669991 Msa1127160:intron 25.0%
! TTTAATTCTCTGATTCTTAG+GGG + chr7_3:78669974-78669993 Msa1127160:intron 25.0%
!!! TGGTTAAAAGGGTTTTTTTT+GGG - chr7_3:78670053-78670072 None:intergenic 25.0%
!! TGATATTGTTTCTTCAAATG+AGG + chr7_3:78670290-78670309 Msa1127160:CDS 25.0%
! AAAACAAGAAATCCATTATC+CGG - chr7_3:78670366-78670385 None:intergenic 25.0%
! AAAAGAGGGAAAAATAAACA+AGG - chr7_3:78670484-78670503 None:intergenic 25.0%
! TAGTAATGTTATCATTTCAG+TGG + chr7_3:78670642-78670661 Msa1127160:intron 25.0%
! ATATTCAATGTCTTGAAGTA+TGG - chr7_3:78671002-78671021 None:intergenic 25.0%
! AAATTGAAGAAGTTCAATGT+AGG + chr7_3:78671226-78671245 Msa1127160:intron 25.0%
!! TCTTTGCAATTTTCAAATGA+TGG + chr7_3:78671331-78671350 Msa1127160:intron 25.0%
!! GTTTTTCATGTAAATACATG+GGG - chr7_3:78671431-78671450 None:intergenic 25.0%
! AACAACTTAACGAAAATTCT+TGG + chr7_3:78671566-78671585 Msa1127160:intron 25.0%
! ATAAGTTCACTATACAACAA+GGG - chr7_3:78671620-78671639 None:intergenic 25.0%
! AATAAGTTCACTATACAACA+AGG - chr7_3:78671621-78671640 None:intergenic 25.0%
! AAAAAAACAGAACTGTTATG+TGG - chr7_3:78671798-78671817 None:intergenic 25.0%
!!! TAACTTTTGTAGTTTTAGCT+GGG + chr7_3:78671841-78671860 Msa1127160:intron 25.0%
! TATATAAATAAAATGCGGAC+AGG - chr7_3:78671896-78671915 None:intergenic 25.0%
!!! ATTTTGGCAAAACATGTATT+TGG + chr7_3:78672156-78672175 Msa1127160:three_prime_UTR 25.0%
!! TTTTGGCAAAACATGTATTT+GGG + chr7_3:78672157-78672176 Msa1127160:three_prime_UTR 25.0%
ACTGTCTGATATGTTTGTTT+GGG + chr7_3:78669606-78669625 Msa1127160:CDS 30.0%
TTCTCATAATTATCGTGCTA+TGG + chr7_3:78669678-78669697 Msa1127160:CDS 30.0%
TCAGATCTTGATCATAAACA+AGG + chr7_3:78669830-78669849 Msa1127160:intron 30.0%
! TTTTTGGATTTTGGACTGTT+TGG + chr7_3:78669904-78669923 Msa1127160:intron 30.0%
GAAACAAACCCTAAGTAATT+TGG + chr7_3:78669996-78670015 Msa1127160:intron 30.0%
!!! TTTTTTTTGGGGTGGTTAAA+GGG - chr7_3:78670041-78670060 None:intergenic 30.0%
!!! GGTTAAAAGGGTTTTTTTTG+GGG - chr7_3:78670052-78670071 None:intergenic 30.0%
!!! GTGGTTAAAAGGGTTTTTTT+TGG - chr7_3:78670054-78670073 None:intergenic 30.0%
TTCAACTCAAGTGGTTAAAA+GGG - chr7_3:78670064-78670083 None:intergenic 30.0%
! TTCAATTTGTTCAACTCAAG+TGG - chr7_3:78670073-78670092 None:intergenic 30.0%
GTTATTGAAACAGAATCGTA+AGG + chr7_3:78670137-78670156 Msa1127160:intron 30.0%
ATATACTCTTCAGGATCATA+GGG - chr7_3:78670225-78670244 None:intergenic 30.0%
TATATACTCTTCAGGATCAT+AGG - chr7_3:78670226-78670245 None:intergenic 30.0%
AAACCTGTAGATAAATTTGC+CGG - chr7_3:78670252-78670271 None:intergenic 30.0%
ATAGGAGCAATCAAAAAAGA+GGG - chr7_3:78670498-78670517 None:intergenic 30.0%
TTACCAAAAAGAGTGAAGAT+AGG - chr7_3:78670516-78670535 None:intergenic 30.0%
AAAGGGATTCTGCATTATTA+CGG + chr7_3:78670921-78670940 Msa1127160:CDS 30.0%
AGCAAAAGAAGAAAACAAGA+AGG + chr7_3:78670948-78670967 Msa1127160:CDS 30.0%
! TGATCACTGGATATTTTCAT+TGG + chr7_3:78671125-78671144 Msa1127160:intron 30.0%
! TGCAATTTTCAAATGATGGT+TGG + chr7_3:78671335-78671354 Msa1127160:intron 30.0%
ACAGATATGACAAGCATATA+AGG + chr7_3:78671452-78671471 Msa1127160:intron 30.0%
TCTGATAATACTACTGTCAA+CGG - chr7_3:78671723-78671742 None:intergenic 30.0%
!!! ATTATCAGATTTGTTTTGCC+TGG + chr7_3:78671734-78671753 Msa1127160:intron 30.0%
ATCAACTTTATGCTCTGATA+TGG + chr7_3:78671763-78671782 Msa1127160:intron 30.0%
!!! CTAACTTTTGTAGTTTTAGC+TGG + chr7_3:78671840-78671859 Msa1127160:intron 30.0%
!!! AACTTTTGTAGTTTTAGCTG+GGG + chr7_3:78671842-78671861 Msa1127160:intron 30.0%
! ATTATATTATGGAGCACCTA+TGG + chr7_3:78671938-78671957 Msa1127160:three_prime_UTR 30.0%
TTGACAAAATCACAATGACA+CGG - chr7_3:78672196-78672215 None:intergenic 30.0%
AGCACATTTATAAAACTCAG+AGG - chr7_3:78672291-78672310 None:intergenic 30.0%
!!! CACACTTTTTCTTCTCTTTT+TGG - chr7_3:78672324-78672343 None:intergenic 30.0%
AGTTGTTGAAGTGAGGATAA+TGG - chr7_3:78668999-78669018 None:intergenic 35.0%
CATGTGACTCATTCATTTCT+TGG - chr7_3:78669034-78669053 None:intergenic 35.0%
AAATGTGAGGAGAAAAGGTT+AGG - chr7_3:78669102-78669121 None:intergenic 35.0%
AGAGAAAATGTGAGGAGAAA+AGG - chr7_3:78669107-78669126 None:intergenic 35.0%
! ATAGTTTGTGTGAAGGGTTA+GGG - chr7_3:78669192-78669211 None:intergenic 35.0%
! AATAGTTTGTGTGAAGGGTT+AGG - chr7_3:78669193-78669212 None:intergenic 35.0%
! GTCGAAATAGTTTGTGTGAA+GGG - chr7_3:78669198-78669217 None:intergenic 35.0%
TTTCGACCTTGTGATTATTG+TGG + chr7_3:78669211-78669230 Msa1127160:CDS 35.0%
GAATTGCCACAATAATCACA+AGG - chr7_3:78669220-78669239 None:intergenic 35.0%
!! CTTAGAGAAGAGTTGATTTG+TGG - chr7_3:78669311-78669330 None:intergenic 35.0%
ATCGCATGAATCACAGATTA+AGG - chr7_3:78669344-78669363 None:intergenic 35.0%
!! ACAGTTTTGACAGAAAACAG+AGG - chr7_3:78669401-78669420 None:intergenic 35.0%
! TTTTCTGTCAAAACTGTGAC+TGG + chr7_3:78669404-78669423 Msa1127160:CDS 35.0%
TTTCTGTCAAAACTGTGACT+GGG + chr7_3:78669405-78669424 Msa1127160:CDS 35.0%
ACAAAAGCTCAGTAACTGAA+GGG - chr7_3:78669495-78669514 None:intergenic 35.0%
!! AAAATCTTTGCTTTTGCCTC+AGG + chr7_3:78669543-78669562 Msa1127160:CDS 35.0%
TTTGTTGGGTATGAGATTGA+AGG + chr7_3:78669583-78669602 Msa1127160:CDS 35.0%
GACTGTCTGATATGTTTGTT+TGG + chr7_3:78669605-78669624 Msa1127160:CDS 35.0%
TCGTCAAGACTAACAAAAGA+AGG - chr7_3:78669637-78669656 None:intergenic 35.0%
GCACGATAATTATGAGAAGA+AGG - chr7_3:78669676-78669695 None:intergenic 35.0%
TCATAATTATCGTGCTATGG+AGG + chr7_3:78669681-78669700 Msa1127160:CDS 35.0%
ATGAATTATACCTTGGGCAA+AGG - chr7_3:78669712-78669731 None:intergenic 35.0%
TTTGCCCAAGGTATAATTCA+TGG + chr7_3:78669711-78669730 Msa1127160:intron 35.0%
TGATCATAAACAAGGCATGA+TGG + chr7_3:78669838-78669857 Msa1127160:intron 35.0%
GATCATAAACAAGGCATGAT+GGG + chr7_3:78669839-78669858 Msa1127160:intron 35.0%
! GATGGGATTAGTGCTAAATT+AGG + chr7_3:78669856-78669875 Msa1127160:intron 35.0%
! ACCCTAAGTAATTTGGAGTT+CGG + chr7_3:78670003-78670022 Msa1127160:intron 35.0%
!!! GTTTTTTTTGGGGTGGTTAA+AGG - chr7_3:78670042-78670061 None:intergenic 35.0%
!!! TAAAAGGGTTTTTTTTGGGG+TGG - chr7_3:78670049-78670068 None:intergenic 35.0%
GTTCAACTCAAGTGGTTAAA+AGG - chr7_3:78670065-78670084 None:intergenic 35.0%
!! GCTGCAATTTTAACATGTTC+TGG + chr7_3:78670107-78670126 Msa1127160:intron 35.0%
!!! AGGTTTTGATTGCGATGTAA+AGG + chr7_3:78670266-78670285 Msa1127160:CDS 35.0%
AGAATCAGAGATGCAAAACA+AGG - chr7_3:78670447-78670466 None:intergenic 35.0%
GATAGGAGCAATCAAAAAAG+AGG - chr7_3:78670499-78670518 None:intergenic 35.0%
!! TTTGGTAAACGAACTTGCTA+TGG + chr7_3:78670528-78670547 Msa1127160:intron 35.0%
! GTATTGATATAAGATGAGCC+AGG + chr7_3:78670550-78670569 Msa1127160:intron 35.0%
CAATTAGAATAACAACCACC+TGG - chr7_3:78670571-78670590 None:intergenic 35.0%
! GCTTTGAATGATGTATCAAC+AGG - chr7_3:78670704-78670723 None:intergenic 35.0%
AAACATTCTGTATCTTCTGC+TGG + chr7_3:78670746-78670765 Msa1127160:CDS 35.0%
AACATTCTGTATCTTCTGCT+GGG + chr7_3:78670747-78670766 Msa1127160:CDS 35.0%
TAACTCATATGGAGAAGGAA+CGG - chr7_3:78670891-78670910 None:intergenic 35.0%
!! TCTTGACTTGCTAACTCATA+TGG - chr7_3:78670902-78670921 None:intergenic 35.0%
ATGAGTTAGCAAGTCAAGAA+AGG + chr7_3:78670903-78670922 Msa1127160:CDS 35.0%
TGAGTTAGCAAGTCAAGAAA+GGG + chr7_3:78670904-78670923 Msa1127160:CDS 35.0%
! GAAGAAAACAAGAAGGTATG+TGG + chr7_3:78670955-78670974 Msa1127160:intron 35.0%
TGAAGTATGGAGTTCAGATA+TGG - chr7_3:78670989-78671008 None:intergenic 35.0%
ATGATGACTCCCAAGTAATA+TGG + chr7_3:78671100-78671119 Msa1127160:intron 35.0%
GTGATCAAGCCATATTACTT+GGG - chr7_3:78671112-78671131 None:intergenic 35.0%
AGTGATCAAGCCATATTACT+TGG - chr7_3:78671113-78671132 None:intergenic 35.0%
AAGTAATATGGCTTGATCAC+TGG + chr7_3:78671112-78671131 Msa1127160:intron 35.0%
CAATTCACAGTAAATGGAAC+AGG - chr7_3:78671281-78671300 None:intergenic 35.0%
GTTCCATTTACTGTGAATTG+TGG + chr7_3:78671281-78671300 Msa1127160:intron 35.0%
GAACCACAATTCACAGTAAA+TGG - chr7_3:78671287-78671306 None:intergenic 35.0%
! TGTGGTTCTGTAATTGATCA+TGG + chr7_3:78671299-78671318 Msa1127160:intron 35.0%
TTTCATGTAAATACATGGGG+TGG - chr7_3:78671428-78671447 None:intergenic 35.0%
GGTATGAATCACGTAAAGTT+CGG + chr7_3:78671473-78671492 Msa1127160:CDS 35.0%
GTATGAATCACGTAAAGTTC+GGG + chr7_3:78671474-78671493 Msa1127160:CDS 35.0%
ATGATTTCAGTGCTCTATCT+TGG - chr7_3:78671533-78671552 None:intergenic 35.0%
!! AAGATAGAGCACTGAAATCA+TGG + chr7_3:78671532-78671551 Msa1127160:exon 35.0%
TGTATGATGTTGTGTATCCT+TGG + chr7_3:78671657-78671676 Msa1127160:intron 35.0%
!! CATAAAGTTGATGATTTGCC+AGG - chr7_3:78671755-78671774 None:intergenic 35.0%
!!! ACTTTTGTAGTTTTAGCTGG+GGG + chr7_3:78671843-78671862 Msa1127160:intron 35.0%
GGGAAATACTTGTAAGTTTG+CGG + chr7_3:78671864-78671883 Msa1127160:intron 35.0%
! GCGATATATCACTCTGATTT+TGG + chr7_3:78672140-78672159 Msa1127160:three_prime_UTR 35.0%
CCTAGAACTACAACTTTACA+TGG - chr7_3:78672264-78672283 None:intergenic 35.0%
CCATGTAAAGTTGTAGTTCT+AGG + chr7_3:78672261-78672280 Msa1127160:three_prime_UTR 35.0%
AAGCACAAGTTGTTGAAGTG+AGG - chr7_3:78669006-78669025 None:intergenic 40.0%
TTTGAAGAGAGTGGCAAAAG+AGG - chr7_3:78669063-78669082 None:intergenic 40.0%
AGGATATGGTTTGAAGAGAG+TGG - chr7_3:78669072-78669091 None:intergenic 40.0%
AGAAAAGGTTAGGTGGAATG+AGG - chr7_3:78669092-78669111 None:intergenic 40.0%
GAGAGATGAGAGAAAATGTG+AGG - chr7_3:78669115-78669134 None:intergenic 40.0%
TCTCTCTTAAACCACACCAT+GGG + chr7_3:78669145-78669164 Msa1127160:exon 40.0%
! GGTCGAAATAGTTTGTGTGA+AGG - chr7_3:78669199-78669218 None:intergenic 40.0%
GTCACAAGAGAAACAGAGTT+TGG - chr7_3:78669275-78669294 None:intergenic 40.0%
GATTTGTGGAGTGAACTTCA+CGG - chr7_3:78669297-78669316 None:intergenic 40.0%
GTAGAACAGAGTATAGTAGC+AGG - chr7_3:78669373-78669392 None:intergenic 40.0%
CATGAGGTGAAGATAGTGAA+AGG - chr7_3:78669441-78669460 None:intergenic 40.0%
TATCTTCACCTCATGAACGA+AGG + chr7_3:78669446-78669465 Msa1127160:CDS 40.0%
GACAAAAGCTCAGTAACTGA+AGG - chr7_3:78669496-78669515 None:intergenic 40.0%
!!! TACTGAGCTTTTGTCGATTC+TGG + chr7_3:78669501-78669520 Msa1127160:CDS 40.0%
!!! ACTGAGCTTTTGTCGATTCT+GGG + chr7_3:78669502-78669521 Msa1127160:CDS 40.0%
ATTCTGGGTTTGCAGGATAT+TGG + chr7_3:78669517-78669536 Msa1127160:CDS 40.0%
AATTATACCTTGGGCAAAGG+AGG - chr7_3:78669709-78669728 None:intergenic 40.0%
GCCGAACTCCAAATTACTTA+GGG - chr7_3:78670007-78670026 None:intergenic 40.0%
AGCCGAACTCCAAATTACTT+AGG - chr7_3:78670008-78670027 None:intergenic 40.0%
! TCCTGAAGAGTATATACCAC+CGG + chr7_3:78670230-78670249 Msa1127160:CDS 40.0%
GAAATCCATTATCCGGAATG+AGG - chr7_3:78670359-78670378 None:intergenic 40.0%
! GCTCCTATCTTCACTCTTTT+TGG + chr7_3:78670510-78670529 Msa1127160:intron 40.0%
TTGATATAAGATGAGCCAGG+TGG + chr7_3:78670553-78670572 Msa1127160:intron 40.0%
ACAGGAACAACTTGATGCAT+AGG - chr7_3:78670686-78670705 None:intergenic 40.0%
ACATTCTGTATCTTCTGCTG+GGG + chr7_3:78670748-78670767 Msa1127160:CDS 40.0%
TCTCTCAACCACTGTAACAA+CGG + chr7_3:78670812-78670831 Msa1127160:CDS 40.0%
TCAGACTTGAGATACTCTGA+AGG - chr7_3:78670845-78670864 None:intergenic 40.0%
CTTGCTAACTCATATGGAGA+AGG - chr7_3:78670896-78670915 None:intergenic 40.0%
GGATTGTTGATCAATGAGCT+AGG + chr7_3:78671356-78671375 Msa1127160:intron 40.0%
AGTGCTCTATCTTGGCAAAT+CGG - chr7_3:78671525-78671544 None:intergenic 40.0%
!! TAGAGCACTGAAATCATGGT+AGG + chr7_3:78671536-78671555 Msa1127160:intron 40.0%
!!! CTTTTGTAGTTTTAGCTGGG+GGG + chr7_3:78671844-78671863 Msa1127160:intron 40.0%
TGTAGTTGTTCTTGAAGCTG+TGG + chr7_3:78672016-78672035 Msa1127160:three_prime_UTR 40.0%
AGGAGTCATATACTTCATCC+TGG + chr7_3:78672053-78672072 Msa1127160:three_prime_UTR 40.0%
GGGTTGAAAAATAGAAGACC+AGG - chr7_3:78672074-78672093 None:intergenic 40.0%
! GAAGAAAAAGTGTGAACCCT+TGG + chr7_3:78672330-78672349 Msa1127160:three_prime_UTR 40.0%
CTCATCCAACTTCAATCCAA+GGG - chr7_3:78672349-78672368 None:intergenic 40.0%
GAGAGTGGCAAAAGAGGATT+TGG - chr7_3:78669057-78669076 None:intergenic 45.0%
GGTTAGGTGGAATGAGGATA+TGG - chr7_3:78669086-78669105 None:intergenic 45.0%
TGTGAGGAGAAAAGGTTAGG+TGG - chr7_3:78669099-78669118 None:intergenic 45.0%
CTCTCTCTTAAACCACACCA+TGG + chr7_3:78669144-78669163 Msa1127160:exon 45.0%
TGTGTGAAGGGTTAGGGTTA+GGG - chr7_3:78669186-78669205 None:intergenic 45.0%
TTGTGTGAAGGGTTAGGGTT+AGG - chr7_3:78669187-78669206 None:intergenic 45.0%
!! TTTGTCGATTCTGGGTTTGC+AGG + chr7_3:78669510-78669529 Msa1127160:CDS 45.0%
!! CTTTTGCCTCAGGAAAGTGT+AGG + chr7_3:78669553-78669572 Msa1127160:CDS 45.0%
! CTCAGGAAAGTGTAGGAGAT+GGG + chr7_3:78669560-78669579 Msa1127160:CDS 45.0%
! AGTGTAGGAGATGGGTTTGT+TGG + chr7_3:78669568-78669587 Msa1127160:CDS 45.0%
! GTGTAGGAGATGGGTTTGTT+GGG + chr7_3:78669569-78669588 Msa1127160:CDS 45.0%
CCTGTAGATAAATTTGCCGG+TGG - chr7_3:78670249-78670268 None:intergenic 45.0%
CCACCGGCAAATTTATCTAC+AGG + chr7_3:78670246-78670265 Msa1127160:CDS 45.0%
TGTGTTGTCGATCCTCATTC+CGG + chr7_3:78670344-78670363 Msa1127160:intron 45.0%
TCGATCCTCATTCCGGATAA+TGG + chr7_3:78670351-78670370 Msa1127160:intron 45.0%
CCTCATACCCAGTGTAACAA+CGG + chr7_3:78670773-78670792 Msa1127160:CDS 45.0%
ATACCCAGTGTAACAACGGA+GGG + chr7_3:78670777-78670796 Msa1127160:CDS 45.0%
CAGTGGTTGAGAGATTCTGA+AGG - chr7_3:78670806-78670825 None:intergenic 45.0%
TCAACCACTGTAACAACGGA+GGG + chr7_3:78670816-78670835 Msa1127160:CDS 45.0%
!! GGCTTTAGGAGTAGTTGACA+AGG - chr7_3:78670870-78670889 None:intergenic 45.0%
TATGGAGAAGGAACGGCTTT+AGG - chr7_3:78670884-78670903 None:intergenic 45.0%
TGAATCACGTAAAGTTCGGG+CGG + chr7_3:78671477-78671496 Msa1127160:CDS 45.0%
GAGAGCAGGACAAGAGTTAA+GGG + chr7_3:78671499-78671518 Msa1127160:CDS 45.0%
!! GTATCAAAGCTCTGGATCCA+AGG - chr7_3:78671677-78671696 None:intergenic 45.0%
ACTGCACAGTATCAAAGCTC+TGG - chr7_3:78671685-78671704 None:intergenic 45.0%
TTCTGCTCCAAGTCTACCAT+AGG - chr7_3:78671957-78671976 None:intergenic 45.0%
! GGAGCAGAAGTACATCAAGA+AGG + chr7_3:78671968-78671987 Msa1127160:three_prime_UTR 45.0%
TTGTTCTTGAAGCTGTGGCT+TGG + chr7_3:78672021-78672040 Msa1127160:three_prime_UTR 45.0%
GTGAACCCTTGGATTGAAGT+TGG + chr7_3:78672341-78672360 Msa1127160:three_prime_UTR 45.0%
GCTCATCCAACTTCAATCCA+AGG - chr7_3:78672350-78672369 None:intergenic 45.0%
CTCTTAAACCACACCATGGG+TGG + chr7_3:78669148-78669167 Msa1127160:exon 50.0%
! GTTTCTAGGAGAACCACCCA+TGG - chr7_3:78669164-78669183 None:intergenic 50.0%
GGGTTAGGGTTAGGGTTTCT+AGG - chr7_3:78669178-78669197 None:intergenic 50.0%
TCAAGAGGCCTTCGTTCATG+AGG - chr7_3:78669457-78669476 None:intergenic 50.0%
TCATGAACGAAGGCCTCTTG+AGG + chr7_3:78669456-78669475 Msa1127160:CDS 50.0%
CATGAACGAAGGCCTCTTGA+GGG + chr7_3:78669457-78669476 Msa1127160:CDS 50.0%
! AGGCCTCTTGAGGGTTTTAC+AGG + chr7_3:78669466-78669485 Msa1127160:CDS 50.0%
! GGCCTCTTGAGGGTTTTACA+GGG + chr7_3:78669467-78669486 Msa1127160:CDS 50.0%
CACCCTGTAAAACCCTCAAG+AGG - chr7_3:78669472-78669491 None:intergenic 50.0%
CCATCTCCTACACTTTCCTG+AGG - chr7_3:78669562-78669581 None:intergenic 50.0%
! CCTCAGGAAAGTGTAGGAGA+TGG + chr7_3:78669559-78669578 Msa1127160:CDS 50.0%
CAGAATCGTAAGGCTGCTTG+TGG + chr7_3:78670147-78670166 Msa1127160:intron 50.0%
GCCGGTGGTATATACTCTTC+AGG - chr7_3:78670234-78670253 None:intergenic 50.0%
CCGTTGTTACACTGGGTATG+AGG - chr7_3:78670776-78670795 None:intergenic 50.0%
CATACCCAGTGTAACAACGG+AGG + chr7_3:78670776-78670795 Msa1127160:CDS 50.0%
CTCAACCACTGTAACAACGG+AGG + chr7_3:78670815-78670834 Msa1127160:CDS 50.0%
GGAGAGCAGGACAAGAGTTA+AGG + chr7_3:78671498-78671517 Msa1127160:CDS 50.0%
! TGGAGCACCTATGGTAGACT+TGG + chr7_3:78671947-78671966 Msa1127160:three_prime_UTR 50.0%
! TCTTGAAGCTGTGGCTTGGA+AGG + chr7_3:78672025-78672044 Msa1127160:three_prime_UTR 50.0%
TAGGAGAACCACCCATGGTG+TGG - chr7_3:78669159-78669178 None:intergenic 55.0%
CGTCCCTCCGTTGTTACACT+GGG - chr7_3:78670783-78670802 None:intergenic 55.0%
! TGAAGCTGTGGCTTGGAAGG+TGG + chr7_3:78672028-78672047 Msa1127160:three_prime_UTR 55.0%
GGAGGTTCCTCCTTTGCCCA+AGG + chr7_3:78669699-78669718 Msa1127160:CDS 60.0%
GCGTCCCTCCGTTGTTACAC+TGG - chr7_3:78670784-78670803 None:intergenic 60.0%
GCGTCCCTCCGTTGTTACAG+TGG - chr7_3:78670823-78670842 None:intergenic 60.0%
GTAAAGTTCGGGCGGAGAGC+AGG + chr7_3:78671485-78671504 Msa1127160:CDS 60.0%
! CTGTGGCTTGGAAGGTGGCA+AGG + chr7_3:78672033-78672052 Msa1127160:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 78668983 78672377 78668983 ID=Msa1127160;Name=Msa1127160
chr7_3 mRNA 78668983 78672377 78668983 ID=Msa1127160-mRNA-1;Parent=Msa1127160;Name=Msa1127160-mRNA-1;_AED=0.14;_eAED=0.14;_QI=180|1|0.8|1|0.5|0.6|5|455|372
chr7_3 exon 78668983 78669720 78668983 ID=Msa1127160-mRNA-1:exon:22046;Parent=Msa1127160-mRNA-1
chr7_3 exon 78670150 78670311 78670150 ID=Msa1127160-mRNA-1:exon:22047;Parent=Msa1127160-mRNA-1
chr7_3 exon 78670662 78670969 78670662 ID=Msa1127160-mRNA-1:exon:22048;Parent=Msa1127160-mRNA-1
chr7_3 exon 78671456 78671553 78671456 ID=Msa1127160-mRNA-1:exon:22049;Parent=Msa1127160-mRNA-1
chr7_3 exon 78671930 78672377 78671930 ID=Msa1127160-mRNA-1:exon:22050;Parent=Msa1127160-mRNA-1
chr7_3 five_prime_UTR 78668983 78669162 78668983 ID=Msa1127160-mRNA-1:five_prime_utr;Parent=Msa1127160-mRNA-1
chr7_3 CDS 78669163 78669720 78669163 ID=Msa1127160-mRNA-1:cds;Parent=Msa1127160-mRNA-1
chr7_3 CDS 78670150 78670311 78670150 ID=Msa1127160-mRNA-1:cds;Parent=Msa1127160-mRNA-1
chr7_3 CDS 78670662 78670969 78670662 ID=Msa1127160-mRNA-1:cds;Parent=Msa1127160-mRNA-1
chr7_3 CDS 78671456 78671546 78671456 ID=Msa1127160-mRNA-1:cds;Parent=Msa1127160-mRNA-1
chr7_3 three_prime_UTR 78671547 78671553 78671547 ID=Msa1127160-mRNA-1:three_prime_utr;Parent=Msa1127160-mRNA-1
chr7_3 three_prime_UTR 78671930 78672377 78671930 ID=Msa1127160-mRNA-1:three_prime_utr;Parent=Msa1127160-mRNA-1
Gene Sequence

>Msa1127160

ATGGGTGGTTCTCCTAGAAACCCTAACCCTAACCCTTCACACAAACTATTTCGACCTTGTGATTATTGTGGCAATTCAAACGCAGTTATATACTGCAGAGCAGATTCAGCCAAACTCTGTTTCTCTTGTGACCGTGAAGTTCACTCCACAAATCAACTCTTCTCTAAGCACACACGCTCCTTAATCTGTGATTCATGCGATGATTCACCTGCTACTATACTCTGTTCTACAGAATCCTCTGTTTTCTGTCAAAACTGTGACTGGGAAAATCACAACCTTTCACTATCTTCACCTCATGAACGAAGGCCTCTTGAGGGTTTTACAGGGTGCCCTTCAGTTACTGAGCTTTTGTCGATTCTGGGTTTGCAGGATATTGGAAAAAAATCTTTGCTTTTGCCTCAGGAAAGTGTAGGAGATGGGTTTGTTGGGTATGAGATTGAAGGACTGTCTGATATGTTTGTTTGGGATGCTCCTTCTTTTGTTAGTCTTGACGATCTTATTTCTTCTTCTCCTTCTTCTCATAATTATCGTGCTATGGAGGTTCCTCCTTTGCCCAAGAATCGTAAGGCTGCTTGTGGTAGACACAGAGAAGAGATTTTAAATCAGCTTCGTGAGATGACAAAGTCTGAGCCCTATGATCCTGAAGAGTATATACCACCGGCAAATTTATCTACAGGTTTTGATTGCGATGTAAAGGCTGATATTGTTTCTTCAAATGAGTGGCTCAGAGAAAGTAGCGAGCCTATGCATCAAGTTGTTCCTGTTGATACATCATTCAAAGCTCACACCGAAGAAATTTCACTTAAACATTCTGTATCTTCTGCTGGGGAGCCTCATACCCAGTGTAACAACGGAGGGACGCCTTCAGAATCTCTCAACCACTGTAACAACGGAGGGACGCCTTCAGAGTATCTCAAGTCTGAAACCTTGTCAACTACTCCTAAAGCCGTTCCTTCTCCATATGAGTTAGCAAGTCAAGAAAGGGATTCTGCATTATTACGGTACAAGCAAAAGAAGAAAACAAGAAGATATGACAAGCATATAAGGTATGAATCACGTAAAGTTCGGGCGGAGAGCAGGACAAGAGTTAAGGGCCGATTTGCCAAGATAGAGCACTGA
Protein sequence

>Msa1127160

MGGSPRNPNPNPSHKLFRPCDYCGNSNAVIYCRADSAKLCFSCDREVHSTNQLFSKHTRSLICDSCDDSPATILCSTESSVFCQNCDWENHNLSLSSPHERRPLEGFTGCPSVTELLSILGLQDIGKKSLLLPQESVGDGFVGYEIEGLSDMFVWDAPSFVSLDDLISSSPSSHNYRAMEVPPLPKNRKAACGRHREEILNQLREMTKSEPYDPEEYIPPANLSTGFDCDVKADIVSSNEWLRESSEPMHQVVPVDTSFKAHTEEISLKHSVSSAGEPHTQCNNGGTPSESLNHCNNGGTPSEYLKSETLSTTPKAVPSPYELASQERDSALLRYKQKKKTRRYDKHIRYESRKVRAESRTRVKGRFAKIEH*