Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127340 | XP_024626292.1 | 92.121 | 495 | 14 | 2 | 1 | 495 | 1 | 470 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127340 | I3T416 | 91.313 | 495 | 16 | 2 | 1 | 495 | 1 | 468 | 0.0 | 800 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0433640 | Msa1127340 | 0.807788 | 4.260455e-50 | -8.615850e-47 |
| Msa1082620 | Msa1127340 | 0.890412 | 1.008512e-73 | -8.615850e-47 |
| Msa0265380 | Msa1127340 | 0.802681 | 4.999068e-49 | -8.615850e-47 |
| Msa0309770 | Msa1127340 | 0.809219 | 2.108586e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127340 | MtrunA17_Chr7g0270211 | 91.717 | 495 | 14 | 2 | 1 | 495 | 1 | 468 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127340 | AT3G62330.1 | 50.996 | 502 | 205 | 11 | 6 | 495 | 7 | 479 | 1.43e-138 | 408 |
| Msa1127340 | AT3G62330.2 | 51.804 | 388 | 152 | 7 | 6 | 388 | 7 | 364 | 1.77e-111 | 335 |
Find 156 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGGCCTCATGGTAATTT+TGG | 0.176506 | 7_3:-78910191 | Msa1127340:CDS |
| AACTCTTATAATTCATTTAA+TGG | 0.181957 | 7_3:-78911367 | Msa1127340:CDS |
| ATCCAGTTTCTTGTTTAATA+TGG | 0.206073 | 7_3:-78909618 | Msa1127340:three_prime_UTR |
| CCAAAGCTACTGAGAGAAAT+TGG | 0.250333 | 7_3:-78913497 | Msa1127340:CDS |
| CAACATACTTACCTACCTTA+TGG | 0.254054 | 7_3:+78909684 | None:intergenic |
| CTAAAATCGTCGTCAATATC+TGG | 0.261155 | 7_3:+78913696 | None:intergenic |
| TCTTCATTTCGTGAAGCTTA+TGG | 0.267831 | 7_3:-78911454 | Msa1127340:CDS |
| TTGCTTGTTGTTGACGCCTC+TGG | 0.269586 | 7_3:+78910360 | None:intergenic |
| CTTACATTTCTGTCTCTTGC+AGG | 0.289233 | 7_3:+78912218 | None:intergenic |
| TAAGTATGTTGATTAATCTT+AGG | 0.289447 | 7_3:-78909672 | Msa1127340:three_prime_UTR |
| ATTAGAGTTAGAGTATAAAA+AGG | 0.294208 | 7_3:-78911227 | Msa1127340:CDS |
| GTCATAACATGGGCACTTAT+AGG | 0.296537 | 7_3:-78911339 | Msa1127340:CDS |
| CCAATTTCTCTCAGTAGCTT+TGG | 0.319678 | 7_3:+78913497 | None:intergenic |
| AAAATTCTTTCCGTCGATAT+CGG | 0.325673 | 7_3:+78913742 | None:intergenic |
| TTGGGAAGGGACATGCATTC+TGG | 0.338059 | 7_3:-78909648 | Msa1127340:three_prime_UTR |
| AATCTTACTTATAACTTTCT+CGG | 0.338549 | 7_3:+78912184 | None:intergenic |
| AGAGAAGTCCTGTTAATTCC+AGG | 0.343211 | 7_3:-78911965 | Msa1127340:CDS |
| TAGAGAGGAAGGTGAACAAA+AGG | 0.344612 | 7_3:-78912057 | Msa1127340:CDS |
| CCTTTCAGTAAATACTCTTC+AGG | 0.347913 | 7_3:+78911617 | None:intergenic |
| TTGTTTGCTCCAAGAGTAGA+TGG | 0.354982 | 7_3:+78912269 | None:intergenic |
| TGTAAATTATGTGGTGAATC+TGG | 0.363570 | 7_3:-78913447 | Msa1127340:CDS |
| AACATACTTACCTACCTTAT+GGG | 0.365752 | 7_3:+78909685 | None:intergenic |
| TGCTCTCTCTTGAACAGATC+CGG | 0.368116 | 7_3:+78913638 | None:intergenic |
| TAGGGTTGTCCATCTACTCT+TGG | 0.383053 | 7_3:-78912278 | Msa1127340:CDS |
| CATTGTTTACCATCCATTAC+CGG | 0.384194 | 7_3:-78909555 | Msa1127340:three_prime_UTR |
| AAATTACCATGAGGCCTTGT+AGG | 0.384732 | 7_3:+78910194 | None:intergenic |
| TGCTTGTTGTTGACGCCTCT+GGG | 0.385578 | 7_3:+78910361 | None:intergenic |
| TCTTGCCTGCCAAACCTTTG+AGG | 0.393160 | 7_3:+78911885 | None:intergenic |
| AACCATATTAAACAAGAAAC+TGG | 0.396810 | 7_3:+78909616 | None:intergenic |
| GGTATCCAGGAGACATTTGT+TGG | 0.400337 | 7_3:+78910336 | None:intergenic |
| AAACCAGTTGGAATAGCATT+AGG | 0.410070 | 7_3:+78913555 | None:intergenic |
| CCTGTATGTGAGGCTTGTCT+TGG | 0.411871 | 7_3:+78911391 | None:intergenic |
| AAAATCAACCAGTCATTCAT+AGG | 0.420779 | 7_3:+78909504 | None:intergenic |
| GAGAAATTCATTATTGTTAG+TGG | 0.425015 | 7_3:-78912128 | Msa1127340:CDS |
| TGCATAGACAGATATGTTAC+TGG | 0.426052 | 7_3:+78909389 | None:intergenic |
| GATCCTAATGCTATTCCAAC+TGG | 0.426095 | 7_3:-78913558 | Msa1127340:CDS |
| ATTGAACAAGTCACCGGTAA+TGG | 0.427965 | 7_3:+78909542 | None:intergenic |
| CGCTGAAACCTGGAATTAAC+AGG | 0.429154 | 7_3:+78911957 | None:intergenic |
| TACCTTTGGAGTCACGGAAT+AGG | 0.431804 | 7_3:-78910241 | Msa1127340:CDS |
| TGGTGGAAACAATTTACCTT+TGG | 0.432200 | 7_3:-78910255 | Msa1127340:CDS |
| AGGTAAATTGTTTCCACCAT+AGG | 0.433472 | 7_3:+78910259 | None:intergenic |
| TGGTAAGGATAGGTTAGTTA+TGG | 0.433855 | 7_3:-78912108 | Msa1127340:CDS |
| CCACCATAGGGAGGATTGAC+AGG | 0.436236 | 7_3:+78910272 | None:intergenic |
| CCTCAGTTTCCTCAAAGGTT+TGG | 0.436272 | 7_3:-78911894 | Msa1127340:CDS |
| AACAAATGTCTCCTGGATAC+CGG | 0.439748 | 7_3:-78910334 | Msa1127340:CDS |
| CCAAGACAAGCCTCACATAC+AGG | 0.441668 | 7_3:-78911391 | Msa1127340:CDS |
| ATTCATTATTGTTAGTGGTA+AGG | 0.444515 | 7_3:-78912123 | Msa1127340:CDS |
| GAATAGGTTCTCAAACAGTA+TGG | 0.448781 | 7_3:-78910225 | Msa1127340:CDS |
| TGTTTATAGCCCCGGTATCC+AGG | 0.457359 | 7_3:+78910323 | None:intergenic |
| GATTCTCATAGGAGAGAATC+TGG | 0.460700 | 7_3:-78911304 | Msa1127340:CDS |
| AGAGAGCAAAATCGAACAAA+AGG | 0.462268 | 7_3:-78913623 | Msa1127340:CDS |
| TGTTGATTAATCTTAGGATT+GGG | 0.463338 | 7_3:-78909666 | Msa1127340:three_prime_UTR |
| ACAAATGTCTCCTGGATACC+GGG | 0.466554 | 7_3:-78910333 | Msa1127340:CDS |
| TGATCGGTTAATCTGAGAAC+TGG | 0.471571 | 7_3:+78912028 | None:intergenic |
| ATGTTGATTAATCTTAGGAT+TGG | 0.473640 | 7_3:-78909667 | Msa1127340:three_prime_UTR |
| AGTTTCCTCAAAGGTTTGGC+AGG | 0.474360 | 7_3:-78911890 | Msa1127340:CDS |
| TGCTTTGTTACAATCAATCC+AGG | 0.474930 | 7_3:-78909465 | Msa1127340:three_prime_UTR |
| GGTAAATTGTTTCCACCATA+GGG | 0.480049 | 7_3:+78910260 | None:intergenic |
| TAAGCCGTGATGCTAAGGTC+TGG | 0.480801 | 7_3:-78913530 | Msa1127340:CDS |
| CATGGGATGCCTCAAACACC+TGG | 0.481125 | 7_3:+78909447 | None:intergenic |
| AAGTTATAAGTAAGATTGAA+AGG | 0.483840 | 7_3:-78912178 | Msa1127340:CDS |
| TAACACCTACTCGATCAATC+TGG | 0.483908 | 7_3:+78909720 | None:intergenic |
| CCATGAGGCCTTGTAGGATA+AGG | 0.486332 | 7_3:+78910200 | None:intergenic |
| GCATCCCATGTGTGTTCTTG+TGG | 0.487622 | 7_3:-78909434 | Msa1127340:three_prime_UTR |
| ATGACGGGTGGGATTCTCAT+AGG | 0.491698 | 7_3:-78911315 | Msa1127340:CDS |
| TACACTGGTCCTGTAGGATC+CGG | 0.492783 | 7_3:-78913657 | Msa1127340:CDS |
| TAAATGAACAAGAGCCCATA+AGG | 0.493278 | 7_3:-78909699 | Msa1127340:three_prime_UTR |
| ACAATCAATCCAGGTGTTTG+AGG | 0.495827 | 7_3:-78909456 | Msa1127340:three_prime_UTR |
| TCGTCGTCAATATCTGGATC+GGG | 0.501317 | 7_3:+78913702 | None:intergenic |
| ACAATTTACCTTTGGAGTCA+CGG | 0.501550 | 7_3:-78910247 | Msa1127340:CDS |
| CACTTATAGGAATGACGGGT+GGG | 0.501869 | 7_3:-78911326 | Msa1127340:CDS |
| TTGTGATCAAAGTGTTGGCC+AGG | 0.507335 | 7_3:+78911274 | None:intergenic |
| GCAATCCAACAAATGTCTCC+TGG | 0.514307 | 7_3:-78910341 | Msa1127340:CDS |
| AAGCCGTGATGCTAAGGTCT+GGG | 0.517930 | 7_3:-78913529 | Msa1127340:CDS |
| GAGGTGGTGGTGACCTTGAT+CGG | 0.519039 | 7_3:+78911988 | None:intergenic |
| AGGACGGAGATAATTGTTGA+AGG | 0.519761 | 7_3:+78911637 | None:intergenic |
| AGTTATAAGTAAGATTGAAA+GGG | 0.520213 | 7_3:-78912177 | Msa1127340:CDS |
| ATCGTCGTCAATATCTGGAT+CGG | 0.521045 | 7_3:+78913701 | None:intergenic |
| TCTCCTGTCAATCCTCCCTA+TGG | 0.523647 | 7_3:-78910275 | Msa1127340:CDS |
| GACTTGTTCAATGATATTTG+TGG | 0.532061 | 7_3:-78909531 | Msa1127340:three_prime_UTR |
| TTCCACGCATACAAAACAAT+GGG | 0.537109 | 7_3:-78910405 | Msa1127340:CDS |
| CATTGGCTGCAAAATTAAGA+TGG | 0.539929 | 7_3:-78912153 | Msa1127340:CDS |
| TTTCATAAGCCGTGATGCTA+AGG | 0.540938 | 7_3:-78913535 | Msa1127340:CDS |
| GTTCTCAGATTAACCGATCA+AGG | 0.541651 | 7_3:-78912025 | Msa1127340:CDS |
| GACCTTGATCGGTGAGGTGG+TGG | 0.542651 | 7_3:+78911999 | None:intergenic |
| CACCACCACCTCACCGATCA+AGG | 0.546549 | 7_3:-78912001 | Msa1127340:CDS |
| AGTAAGATTGAAAGGGACAT+TGG | 0.550835 | 7_3:-78912170 | Msa1127340:CDS |
| AGAGAATCTGGCATCCAACC+TGG | 0.552227 | 7_3:-78911292 | Msa1127340:CDS |
| CTTTCCGTCGATATCGGCGA+TGG | 0.556581 | 7_3:+78913748 | None:intergenic |
| CTTCCCAGACCTTAGCATCA+CGG | 0.556692 | 7_3:+78913526 | None:intergenic |
| TGAACAGATCCGGATCCTAC+AGG | 0.557652 | 7_3:+78913648 | None:intergenic |
| TAATGGACAAAGTCATAACA+TGG | 0.557743 | 7_3:-78911350 | Msa1127340:CDS |
| TACGTAAGTGGAACAAGCGA+AGG | 0.558453 | 7_3:+78913780 | None:intergenic |
| TTTGGTGAATTTCAGAGGCG+TGG | 0.562193 | 7_3:-78910173 | Msa1127340:CDS |
| CCTGTCAATCCTCCCTATGG+TGG | 0.562319 | 7_3:-78910272 | Msa1127340:CDS |
| TTATTGTTAGTGGTAAGGAT+AGG | 0.562634 | 7_3:-78912118 | Msa1127340:CDS |
| ATTCTTCTAGAGTATGAAGT+GGG | 0.563036 | 7_3:+78911248 | None:intergenic |
| AGTCTCAAGAATTATTTCAA+AGG | 0.563474 | 7_3:-78912244 | Msa1127340:CDS |
| GTGGAGATCCTATGAATGAC+TGG | 0.564154 | 7_3:-78909512 | Msa1127340:three_prime_UTR |
| GAGGTGGTGGTGACCTTGAT+CGG | 0.565416 | 7_3:+78912012 | None:intergenic |
| GATTAATCTTAGGATTGGGA+AGG | 0.565438 | 7_3:-78909662 | Msa1127340:three_prime_UTR |
| ACAGGACTTCTCTGAGGTGG+TGG | 0.567295 | 7_3:+78911975 | None:intergenic |
| ACTTCCATCGCCGATATCGA+CGG | 0.568281 | 7_3:-78913752 | Msa1127340:five_prime_UTR |
| CCTTATCCTACAAGGCCTCA+TGG | 0.568761 | 7_3:-78910200 | Msa1127340:CDS |
| GATAGGTTAGTTATGGCTAA+AGG | 0.569288 | 7_3:-78912101 | Msa1127340:CDS |
| ATACACCTCAGTTTCCTCAA+AGG | 0.570797 | 7_3:-78911899 | Msa1127340:CDS |
| GACCAGTGTACTCTTTGTAT+AGG | 0.573298 | 7_3:+78913670 | None:intergenic |
| GAAATGATTTGTAAATTATG+TGG | 0.573666 | 7_3:-78913456 | Msa1127340:CDS |
| AACAAGCGAAGGGATAGAAA+TGG | 0.577091 | 7_3:+78913791 | None:intergenic |
| AGAGAGGAAGGTGAACAAAA+GGG | 0.582535 | 7_3:-78912056 | Msa1127340:CDS |
| ATGGGCACTTATAGGAATGA+CGG | 0.583334 | 7_3:-78911331 | Msa1127340:CDS |
| TCGAACAAAAGGTCAAATGC+AGG | 0.585317 | 7_3:-78913612 | Msa1127340:CDS |
| ATTAATCTTAGGATTGGGAA+GGG | 0.586388 | 7_3:-78909661 | Msa1127340:three_prime_UTR |
| TGGGCACTTATAGGAATGAC+GGG | 0.587886 | 7_3:-78911330 | Msa1127340:CDS |
| TCACGGCTTATGAAACCAGT+TGG | 0.589003 | 7_3:+78913543 | None:intergenic |
| CAAGACAAGCCTCACATACA+GGG | 0.589341 | 7_3:-78911390 | Msa1127340:CDS |
| AACAAGTCACCGGTAATGGA+TGG | 0.590373 | 7_3:+78909546 | None:intergenic |
| GATCAAAGTGTTGGCCAGGT+TGG | 0.598440 | 7_3:+78911278 | None:intergenic |
| GTGCATAAGATTAGAGAGGA+AGG | 0.603186 | 7_3:-78912068 | Msa1127340:CDS |
| AAAATCCACAAGAACACACA+TGG | 0.604152 | 7_3:+78909429 | None:intergenic |
| ATAAGAGTTCCCTGTATGTG+AGG | 0.605160 | 7_3:+78911381 | None:intergenic |
| AGAAAATTTAAAACATCGTG+AGG | 0.606495 | 7_3:-78911161 | Msa1127340:intron |
| AAAGAGTACACTGGTCCTGT+AGG | 0.608456 | 7_3:-78913663 | Msa1127340:CDS |
| GTATGGAGCCTTATCCTACA+AGG | 0.609509 | 7_3:-78910208 | Msa1127340:CDS |
| AATATCATTGAACAAGTCAC+CGG | 0.617462 | 7_3:+78909536 | None:intergenic |
| ACGTAAGTGGAACAAGCGAA+GGG | 0.618658 | 7_3:+78913781 | None:intergenic |
| GGTGACCTTGATCGGTGAGG+TGG | 0.622749 | 7_3:+78911996 | None:intergenic |
| TGAACAAGAGCCCATAAGGT+AGG | 0.625975 | 7_3:-78909695 | Msa1127340:three_prime_UTR |
| TTTGCAAGAGATTCTCAACA+AGG | 0.632870 | 7_3:-78911822 | Msa1127340:intron |
| GTTCCACGCATACAAAACAA+TGG | 0.633278 | 7_3:-78910406 | Msa1127340:CDS |
| AACCTATTCCGTGACTCCAA+AGG | 0.634103 | 7_3:+78910239 | None:intergenic |
| CCAAACCTTTGAGGAAACTG+AGG | 0.639849 | 7_3:+78911894 | None:intergenic |
| GGGCATTGTGATCAAAGTGT+TGG | 0.639911 | 7_3:+78911269 | None:intergenic |
| TGGATCGGGAATATTCGCCA+TGG | 0.639958 | 7_3:+78913716 | None:intergenic |
| AGGGTCCAGATTGATCGAGT+AGG | 0.646824 | 7_3:-78909725 | Msa1127340:three_prime_UTR |
| TTAACAGGACTTCTCTGAGG+TGG | 0.648118 | 7_3:+78911972 | None:intergenic |
| AAATTGTTTCCACCATAGGG+AGG | 0.648306 | 7_3:+78910263 | None:intergenic |
| GCGAAGGGATAGAAATGGTG+TGG | 0.657806 | 7_3:+78913796 | None:intergenic |
| AATTCTTCTAGAGTATGAAG+TGG | 0.658102 | 7_3:+78911247 | None:intergenic |
| TCAGTAAATACTCTTCAGGA+CGG | 0.664329 | 7_3:+78911621 | None:intergenic |
| GCACTTATAGGAATGACGGG+TGG | 0.665483 | 7_3:-78911327 | Msa1127340:CDS |
| TGAATCTGGACATTTCACTC+AGG | 0.665910 | 7_3:-78913433 | Msa1127340:intron |
| TGCTGTGCATAAGATTAGAG+AGG | 0.673202 | 7_3:-78912072 | Msa1127340:CDS |
| AGAGATCTCATTCTGCACCA+CGG | 0.677131 | 7_3:-78911923 | Msa1127340:CDS |
| TATGGCAATAGTGCATCTAG+AGG | 0.677224 | 7_3:-78911436 | Msa1127340:CDS |
| CAAATGTCTCCTGGATACCG+GGG | 0.678032 | 7_3:-78910332 | Msa1127340:CDS |
| GGTGGTGACCTTGATCGGTG+AGG | 0.695267 | 7_3:+78911993 | None:intergenic |
| GACCTATACAAAGAGTACAC+TGG | 0.695798 | 7_3:-78913672 | Msa1127340:CDS |
| AATGGACAAAGTCATAACAT+GGG | 0.697735 | 7_3:-78911349 | Msa1127340:CDS |
| AAATCCACAAGAACACACAT+GGG | 0.698998 | 7_3:+78909430 | None:intergenic |
| TTCTTCTAGAGTATGAAGTG+GGG | 0.701789 | 7_3:+78911249 | None:intergenic |
| GAATTAACAGGACTTCTCTG+AGG | 0.710369 | 7_3:+78911969 | None:intergenic |
| AATTCACCAAAATTACCATG+AGG | 0.715488 | 7_3:+78910185 | None:intergenic |
| AAGGGATAGAAATGGTGTGG+TGG | 0.721146 | 7_3:+78913799 | None:intergenic |
| GGTGCAGAATGAGATCTCTG+AGG | 0.729093 | 7_3:+78911927 | None:intergenic |
| GGAAACTGAGGTGTATTCCG+TGG | 0.758876 | 7_3:+78911906 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAGAATTACAAAAAA+CGG | + | chr7_3:78912723-78912742 | None:intergenic | 10.0% |
| !!! | GATAAAAAGAATTTTAATAT+CGG | + | chr7_3:78913089-78913108 | None:intergenic | 10.0% |
| !! | TATTATTGTACTTACAATTT+AGG | - | chr7_3:78910918-78910937 | Msa1127340:intron | 15.0% |
| !! | ATTATTGTACTTACAATTTA+GGG | - | chr7_3:78910919-78910938 | Msa1127340:intron | 15.0% |
| !! | AACTCTTATAATTCATTTAA+TGG | - | chr7_3:78911848-78911867 | Msa1127340:CDS | 15.0% |
| !!! | TTAAAATTCTTTTTATCAAG+TGG | - | chr7_3:78913092-78913111 | Msa1127340:intron | 15.0% |
| !! | AAATAAAAAATTAGTAGGTT+TGG | + | chr7_3:78913143-78913162 | None:intergenic | 15.0% |
| !!! | AAATTTTGTTCAAAATCTTT+TGG | - | chr7_3:78913167-78913186 | Msa1127340:intron | 15.0% |
| !!! | GAAATGATTTGTAAATTATG+TGG | - | chr7_3:78909759-78909778 | Msa1127340:intron | 20.0% |
| !! | TAATTTCTACAAGATATCTT+AGG | - | chr7_3:78910092-78910111 | Msa1127340:intron | 20.0% |
| !! | AAGGTATACTGAAAAATTTA+TGG | + | chr7_3:78910322-78910341 | None:intergenic | 20.0% |
| !!! | AGTTATAAGCTATTTTAGTA+AGG | + | chr7_3:78910341-78910360 | None:intergenic | 20.0% |
| !! | AGAATATTATTAATCAGCTA+AGG | + | chr7_3:78910471-78910490 | None:intergenic | 20.0% |
| !! | ATATCGTACTTGAAAATTTA+GGG | - | chr7_3:78910514-78910533 | Msa1127340:intron | 20.0% |
| !! | AATGGATAAATAACTTAGTT+AGG | + | chr7_3:78910579-78910598 | None:intergenic | 20.0% |
| !! | ATAATATCAGTCAACTAAAA+CGG | + | chr7_3:78910904-78910923 | None:intergenic | 20.0% |
| !! | AATCTTACTTATAACTTTCT+CGG | + | chr7_3:78911034-78911053 | None:intergenic | 20.0% |
| !! | AAGTTATAAGTAAGATTGAA+AGG | - | chr7_3:78911037-78911056 | Msa1127340:intron | 20.0% |
| !! | AGTTATAAGTAAGATTGAAA+GGG | - | chr7_3:78911038-78911057 | Msa1127340:intron | 20.0% |
| !! | TTAAAGAAAATCATCTATGT+TGG | - | chr7_3:78911711-78911730 | Msa1127340:intron | 20.0% |
| !! | ATTAGAGTTAGAGTATAAAA+AGG | - | chr7_3:78911988-78912007 | Msa1127340:CDS | 20.0% |
| !!! | AAAACAAATGATTGTTGTTT+AGG | + | chr7_3:78912121-78912140 | None:intergenic | 20.0% |
| !! | TGTGAATTAGTAGAAAAATA+TGG | - | chr7_3:78912628-78912647 | Msa1127340:intron | 20.0% |
| !! | AATAATGTATATTGTCAAAC+AGG | - | chr7_3:78912668-78912687 | Msa1127340:intron | 20.0% |
| !!! | ATATTTTGTTTATTGCTTGA+AGG | - | chr7_3:78912738-78912757 | Msa1127340:intron | 20.0% |
| !!! | TAAGTATGTTGATTAATCTT+AGG | - | chr7_3:78913543-78913562 | Msa1127340:CDS | 20.0% |
| !! | AATTCTGTCATTTGTATTAC+AGG | - | chr7_3:78909812-78909831 | Msa1127340:intron | 25.0% |
| !!! | CTTGTTTTTGATAAGCTTAT+TGG | + | chr7_3:78910125-78910144 | None:intergenic | 25.0% |
| ! | GATATCGTACTTGAAAATTT+AGG | - | chr7_3:78910513-78910532 | Msa1127340:intron | 25.0% |
| ! | ACTAAGTTATTTATCCATTC+AGG | - | chr7_3:78910580-78910599 | Msa1127340:intron | 25.0% |
| ! | CTAAGTTATTTATCCATTCA+GGG | - | chr7_3:78910581-78910600 | Msa1127340:intron | 25.0% |
| !! | AATAAGTTGAAAACAACTGA+TGG | + | chr7_3:78910720-78910739 | None:intergenic | 25.0% |
| ! | AGTCTCAAGAATTATTTCAA+AGG | - | chr7_3:78910971-78910990 | Msa1127340:intron | 25.0% |
| ! | GAGAAATTCATTATTGTTAG+TGG | - | chr7_3:78911087-78911106 | Msa1127340:intron | 25.0% |
| ! | ATTCATTATTGTTAGTGGTA+AGG | - | chr7_3:78911092-78911111 | Msa1127340:intron | 25.0% |
| !! | AGAAAATTTAAAACATCGTG+AGG | - | chr7_3:78912054-78912073 | Msa1127340:CDS | 25.0% |
| !! | ATACTAAAACCTGTCTTTTT+AGG | - | chr7_3:78912172-78912191 | Msa1127340:CDS | 25.0% |
| !! | TGATTTTCTTTTGTCAGTTA+TGG | - | chr7_3:78912239-78912258 | Msa1127340:CDS | 25.0% |
| !!! | TAGTAGACAAGTTTTAATGA+AGG | - | chr7_3:78912262-78912281 | Msa1127340:CDS | 25.0% |
| !!! | AGTAGACAAGTTTTAATGAA+GGG | - | chr7_3:78912263-78912282 | Msa1127340:CDS | 25.0% |
| !!! | AGTTCTGAGTAATTATAACT+AGG | + | chr7_3:78912291-78912310 | None:intergenic | 25.0% |
| ! | CAAAGATAAAACATATGCAT+TGG | + | chr7_3:78912507-78912526 | None:intergenic | 25.0% |
| ! | AATATCATGTAAGATGTTGT+TGG | + | chr7_3:78912599-78912618 | None:intergenic | 25.0% |
| !! | CTATAAACAGCAAAATTTTG+CGG | - | chr7_3:78912906-78912925 | Msa1127340:intron | 25.0% |
| !!! | TCCTTTTAACTGTAAATATG+AGG | - | chr7_3:78913191-78913210 | Msa1127340:intron | 25.0% |
| ! | TCCTCATATTTACAGTTAAA+AGG | + | chr7_3:78913195-78913214 | None:intergenic | 25.0% |
| ! | ATCAACAATATCACAGAATA+CGG | + | chr7_3:78913327-78913346 | None:intergenic | 25.0% |
| !! | ATGTTGATTAATCTTAGGAT+TGG | - | chr7_3:78913548-78913567 | Msa1127340:CDS | 25.0% |
| !! | TGTTGATTAATCTTAGGATT+GGG | - | chr7_3:78913549-78913568 | Msa1127340:CDS | 25.0% |
| !! | ATCCAGTTTCTTGTTTAATA+TGG | - | chr7_3:78913597-78913616 | Msa1127340:CDS | 25.0% |
| ! | AACCATATTAAACAAGAAAC+TGG | + | chr7_3:78913602-78913621 | None:intergenic | 25.0% |
| AAAATTCTTTCCGTCGATAT+CGG | + | chr7_3:78909476-78909495 | None:intergenic | 30.0% | |
| TGTAAATTATGTGGTGAATC+TGG | - | chr7_3:78909768-78909787 | Msa1127340:intron | 30.0% | |
| !!! | GTTTAAGTGTCATTTTACTC+AGG | - | chr7_3:78909871-78909890 | Msa1127340:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr7_3:78910011-78910030 | Msa1127340:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr7_3:78910012-78910031 | Msa1127340:intron | 30.0% |
| ACTAACCTATTTATCCAAAC+AGG | - | chr7_3:78910216-78910235 | Msa1127340:CDS | 30.0% | |
| CTAACCTATTTATCCAAACA+GGG | - | chr7_3:78910217-78910236 | Msa1127340:CDS | 30.0% | |
| TAATCAGCTAAGGACTTATT+TGG | + | chr7_3:78910461-78910480 | None:intergenic | 30.0% | |
| ! | TATCATACTCAAAGGGTATA+TGG | + | chr7_3:78910544-78910563 | None:intergenic | 30.0% |
| ATGCGATTATCATACTCAAA+GGG | + | chr7_3:78910551-78910570 | None:intergenic | 30.0% | |
| AATGCGATTATCATACTCAA+AGG | + | chr7_3:78910552-78910571 | None:intergenic | 30.0% | |
| CAATCAACTAAGATCTTGTT+CGG | + | chr7_3:78910864-78910883 | None:intergenic | 30.0% | |
| TTATTGTTAGTGGTAAGGAT+AGG | - | chr7_3:78911097-78911116 | Msa1127340:intron | 30.0% | |
| TTTCATGATTGTAGCTTGAT+AGG | - | chr7_3:78911463-78911482 | Msa1127340:CDS | 30.0% | |
| !!! | TGTAGCTTGATAGGTTTTTT+TGG | - | chr7_3:78911472-78911491 | Msa1127340:intron | 30.0% |
| !!! | GTAGCTTGATAGGTTTTTTT+GGG | - | chr7_3:78911473-78911492 | Msa1127340:intron | 30.0% |
| ! | AGAGTATTTACTGAAAGGAT+TGG | - | chr7_3:78911603-78911622 | Msa1127340:intron | 30.0% |
| ! | TATGTTAAAGCACTTGAATC+AGG | + | chr7_3:78911740-78911759 | None:intergenic | 30.0% |
| ! | TAATGGACAAAGTCATAACA+TGG | - | chr7_3:78911865-78911884 | Msa1127340:CDS | 30.0% |
| AATGGACAAAGTCATAACAT+GGG | - | chr7_3:78911866-78911885 | Msa1127340:CDS | 30.0% | |
| !! | ATTCTTCTAGAGTATGAAGT+GGG | + | chr7_3:78911970-78911989 | None:intergenic | 30.0% |
| !! | AATTCTTCTAGAGTATGAAG+TGG | + | chr7_3:78911971-78911990 | None:intergenic | 30.0% |
| AGAGTTAGAGTATAAAAAGG+AGG | - | chr7_3:78911991-78912010 | Msa1127340:CDS | 30.0% | |
| !! | TCTTTTTAGGCATTAAGTCA+AGG | - | chr7_3:78912185-78912204 | Msa1127340:CDS | 30.0% |
| GACAAAAGAAAATCAGCATA+GGG | + | chr7_3:78912234-78912253 | None:intergenic | 30.0% | |
| TGACAAAAGAAAATCAGCAT+AGG | + | chr7_3:78912235-78912254 | None:intergenic | 30.0% | |
| !! | AAAATTTTGCGGACTATGAT+AGG | - | chr7_3:78912917-78912936 | Msa1127340:intron | 30.0% |
| AATTCACCAAAATTACCATG+AGG | + | chr7_3:78913033-78913052 | None:intergenic | 30.0% | |
| !! | GTAATTTTGGTGAATTTCAG+AGG | - | chr7_3:78913037-78913056 | Msa1127340:intron | 30.0% |
| TGCTTTAGTAAAATGAGACA+AGG | + | chr7_3:78913221-78913240 | None:intergenic | 30.0% | |
| ! | TTCTGCTCGATAAAATTTTC+AGG | - | chr7_3:78913470-78913489 | Msa1127340:CDS | 30.0% |
| ! | TCTGCTCGATAAAATTTTCA+GGG | - | chr7_3:78913471-78913490 | Msa1127340:CDS | 30.0% |
| AACATACTTACCTACCTTAT+GGG | + | chr7_3:78913533-78913552 | None:intergenic | 30.0% | |
| ATTAATCTTAGGATTGGGAA+GGG | - | chr7_3:78913554-78913573 | Msa1127340:CDS | 30.0% | |
| AATATCATTGAACAAGTCAC+CGG | + | chr7_3:78913682-78913701 | None:intergenic | 30.0% | |
| ! | GACTTGTTCAATGATATTTG+TGG | - | chr7_3:78913684-78913703 | Msa1127340:CDS | 30.0% |
| AAAATCAACCAGTCATTCAT+AGG | + | chr7_3:78913714-78913733 | None:intergenic | 30.0% | |
| !! | TGGAAGTAGTTTTACGTAAG+TGG | + | chr7_3:78909450-78909469 | None:intergenic | 35.0% |
| ! | ACGGAAAGAATTTTCATCCA+TGG | - | chr7_3:78909482-78909501 | Msa1127340:three_prime_UTR | 35.0% |
| CTAAAATCGTCGTCAATATC+TGG | + | chr7_3:78909522-78909541 | None:intergenic | 35.0% | |
| AGAGAGCAAAATCGAACAAA+AGG | - | chr7_3:78909592-78909611 | Msa1127340:three_prime_UTR | 35.0% | |
| AAACCAGTTGGAATAGCATT+AGG | + | chr7_3:78909663-78909682 | None:intergenic | 35.0% | |
| TTTGTATTACAGGCTCTGTT+TGG | - | chr7_3:78909822-78909841 | Msa1127340:intron | 35.0% | |
| ! | TCATTTTACTCAGGTATCAC+TGG | - | chr7_3:78909880-78909899 | Msa1127340:intron | 35.0% |
| !! | ATATCGACTTAGAGCATGTT+TGG | - | chr7_3:78909960-78909979 | Msa1127340:intron | 35.0% |
| TCTCACAAAACTTATGCTAC+TGG | + | chr7_3:78910006-78910025 | None:intergenic | 35.0% | |
| AAAGCCCTGTTTGGATAAAT+AGG | + | chr7_3:78910224-78910243 | None:intergenic | 35.0% | |
| AACTCAAATAAAGCCCTGTT+TGG | + | chr7_3:78910233-78910252 | None:intergenic | 35.0% | |
| ATACCTTGTGGGATAGATTA+AGG | - | chr7_3:78910676-78910695 | Msa1127340:intron | 35.0% | |
| TACCTTGTGGGATAGATTAA+GGG | - | chr7_3:78910677-78910696 | Msa1127340:intron | 35.0% | |
| TTAAGGGAATAGCTTATGAC+AGG | - | chr7_3:78910693-78910712 | Msa1127340:intron | 35.0% | |
| AGTAAGATTGAAAGGGACAT+TGG | - | chr7_3:78911045-78911064 | Msa1127340:intron | 35.0% | |
| ! | CATTGGCTGCAAAATTAAGA+TGG | - | chr7_3:78911062-78911081 | Msa1127340:intron | 35.0% |
| ! | TGGTAAGGATAGGTTAGTTA+TGG | - | chr7_3:78911107-78911126 | Msa1127340:intron | 35.0% |
| ! | GATAGGTTAGTTATGGCTAA+AGG | - | chr7_3:78911114-78911133 | Msa1127340:intron | 35.0% |
| TTTGCAAGAGATTCTCAACA+AGG | - | chr7_3:78911393-78911412 | Msa1127340:CDS | 35.0% | |
| AAGAGATTCTCAACAAGGTA+GGG | - | chr7_3:78911398-78911417 | Msa1127340:CDS | 35.0% | |
| AATTACCAGCTTTCTAACGA+TGG | + | chr7_3:78911445-78911464 | None:intergenic | 35.0% | |
| TCAGTAAATACTCTTCAGGA+CGG | + | chr7_3:78911597-78911616 | None:intergenic | 35.0% | |
| CCTTTCAGTAAATACTCTTC+AGG | + | chr7_3:78911601-78911620 | None:intergenic | 35.0% | |
| !! | CCTGAAGAGTATTTACTGAA+AGG | - | chr7_3:78911598-78911617 | Msa1127340:intron | 35.0% |
| TATTCGCATACTGAAACCAT+TGG | + | chr7_3:78911631-78911650 | None:intergenic | 35.0% | |
| TCTTCATTTCGTGAAGCTTA+TGG | - | chr7_3:78911761-78911780 | Msa1127340:intron | 35.0% | |
| !! | TTCTTCTAGAGTATGAAGTG+GGG | + | chr7_3:78911969-78911988 | None:intergenic | 35.0% |
| AGAGTATAAAAAGGAGGCAA+TGG | - | chr7_3:78911997-78912016 | Msa1127340:CDS | 35.0% | |
| GACTTAATGCCTAAAAAGAC+AGG | + | chr7_3:78912184-78912203 | None:intergenic | 35.0% | |
| TGTAACAGTGAAATGCTCTT+GGG | + | chr7_3:78912432-78912451 | None:intergenic | 35.0% | |
| TTGTAACAGTGAAATGCTCT+TGG | + | chr7_3:78912433-78912452 | None:intergenic | 35.0% | |
| TCAACTAGGTCATCTATTGA+GGG | + | chr7_3:78912470-78912489 | None:intergenic | 35.0% | |
| ! | ATATGCATTGGTATGTGTGT+CGG | + | chr7_3:78912495-78912514 | None:intergenic | 35.0% |
| TCAAACAGGTCATCTATTGA+GGG | - | chr7_3:78912682-78912701 | Msa1127340:intron | 35.0% | |
| TTCCACGCATACAAAACAAT+GGG | - | chr7_3:78912810-78912829 | Msa1127340:intron | 35.0% | |
| !!! | AATTTTGCTGTTTATAGCCC+CGG | + | chr7_3:78912903-78912922 | None:intergenic | 35.0% |
| GGTAAATTGTTTCCACCATA+GGG | + | chr7_3:78912958-78912977 | None:intergenic | 35.0% | |
| AGGTAAATTGTTTCCACCAT+AGG | + | chr7_3:78912959-78912978 | None:intergenic | 35.0% | |
| TGGTGGAAACAATTTACCTT+TGG | - | chr7_3:78912960-78912979 | Msa1127340:intron | 35.0% | |
| !! | ACAATTTACCTTTGGAGTCA+CGG | - | chr7_3:78912968-78912987 | Msa1127340:intron | 35.0% |
| GAATAGGTTCTCAAACAGTA+TGG | - | chr7_3:78912990-78913009 | Msa1127340:intron | 35.0% | |
| ATTCATTTAGTAGCCGATAC+TGG | - | chr7_3:78913293-78913312 | Msa1127340:intron | 35.0% | |
| GTTGATGTTGTCACATAGAA+AGG | - | chr7_3:78913341-78913360 | Msa1127340:intron | 35.0% | |
| TTGTACTATAGTTGACCAAC+AGG | - | chr7_3:78913383-78913402 | Msa1127340:intron | 35.0% | |
| TGTACTATAGTTGACCAACA+GGG | - | chr7_3:78913384-78913403 | Msa1127340:intron | 35.0% | |
| ATCGAGCAGAATTAAAGCTA+TGG | + | chr7_3:78913461-78913480 | None:intergenic | 35.0% | |
| TAAATGAACAAGAGCCCATA+AGG | - | chr7_3:78913516-78913535 | Msa1127340:CDS | 35.0% | |
| CAACATACTTACCTACCTTA+TGG | + | chr7_3:78913534-78913553 | None:intergenic | 35.0% | |
| GATTAATCTTAGGATTGGGA+AGG | - | chr7_3:78913553-78913572 | Msa1127340:CDS | 35.0% | |
| CATTGTTTACCATCCATTAC+CGG | - | chr7_3:78913660-78913679 | Msa1127340:CDS | 35.0% | |
| ! | TGCTTTGTTACAATCAATCC+AGG | - | chr7_3:78913750-78913769 | Msa1127340:five_prime_UTR | 35.0% |
| AAATCCACAAGAACACACAT+GGG | + | chr7_3:78913788-78913807 | None:intergenic | 35.0% | |
| AAAATCCACAAGAACACACA+TGG | + | chr7_3:78913789-78913808 | None:intergenic | 35.0% | |
| ! | TCTTGTGGATTTTTACGCAT+AGG | - | chr7_3:78913796-78913815 | Msa1127340:five_prime_UTR | 35.0% |
| TGCATAGACAGATATGTTAC+TGG | + | chr7_3:78913829-78913848 | None:intergenic | 35.0% | |
| ! | GCGATTACACGTCAGTTTTA+GGG | + | chr7_3:78909376-78909395 | None:intergenic | 40.0% |
| ! | AGCGATTACACGTCAGTTTT+AGG | + | chr7_3:78909377-78909396 | None:intergenic | 40.0% |
| AACAAGCGAAGGGATAGAAA+TGG | + | chr7_3:78909427-78909446 | None:intergenic | 40.0% | |
| ATCGTCGTCAATATCTGGAT+CGG | + | chr7_3:78909517-78909536 | None:intergenic | 40.0% | |
| ! | GACCTATACAAAGAGTACAC+TGG | - | chr7_3:78909543-78909562 | Msa1127340:three_prime_UTR | 40.0% |
| GACCAGTGTACTCTTTGTAT+AGG | + | chr7_3:78909548-78909567 | None:intergenic | 40.0% | |
| TCGAACAAAAGGTCAAATGC+AGG | - | chr7_3:78909603-78909622 | Msa1127340:three_prime_UTR | 40.0% | |
| GATCCTAATGCTATTCCAAC+TGG | - | chr7_3:78909657-78909676 | Msa1127340:three_prime_UTR | 40.0% | |
| TTTCATAAGCCGTGATGCTA+AGG | - | chr7_3:78909680-78909699 | Msa1127340:three_prime_UTR | 40.0% | |
| CCAATTTCTCTCAGTAGCTT+TGG | + | chr7_3:78909721-78909740 | None:intergenic | 40.0% | |
| CCAAAGCTACTGAGAGAAAT+TGG | - | chr7_3:78909718-78909737 | Msa1127340:three_prime_UTR | 40.0% | |
| TGAATCTGGACATTTCACTC+AGG | - | chr7_3:78909782-78909801 | Msa1127340:intron | 40.0% | |
| !!! | TACTCAGGTATCACTGGTTT+TGG | - | chr7_3:78909886-78909905 | Msa1127340:intron | 40.0% |
| GACTTAGAGCATGTTTGGAT+CGG | - | chr7_3:78909965-78909984 | Msa1127340:intron | 40.0% | |
| !! | ACACCTTTTGGGAGATCTTA+CGG | - | chr7_3:78910278-78910297 | Msa1127340:CDS | 40.0% |
| TTTCCGTAAGATCTCCCAAA+AGG | + | chr7_3:78910284-78910303 | None:intergenic | 40.0% | |
| TTTCATCGCCATCTTAGTTG+AGG | - | chr7_3:78910490-78910509 | Msa1127340:intron | 40.0% | |
| TTCATCGCCATCTTAGTTGA+GGG | - | chr7_3:78910491-78910510 | Msa1127340:intron | 40.0% | |
| ACGATATCCCTCAACTAAGA+TGG | + | chr7_3:78910501-78910520 | None:intergenic | 40.0% | |
| AATATTGCAAGTGCCCTGAA+TGG | + | chr7_3:78910597-78910616 | None:intergenic | 40.0% | |
| TAAGCGCTTGTAATACCTTG+TGG | - | chr7_3:78910664-78910683 | Msa1127340:intron | 40.0% | |
| AAGCGCTTGTAATACCTTGT+GGG | - | chr7_3:78910665-78910684 | Msa1127340:intron | 40.0% | |
| TTCCCTTAATCTATCCCACA+AGG | + | chr7_3:78910682-78910701 | None:intergenic | 40.0% | |
| TTGTTTGCTCCAAGAGTAGA+TGG | + | chr7_3:78910949-78910968 | None:intergenic | 40.0% | |
| CTTACATTTCTGTCTCTTGC+AGG | + | chr7_3:78911000-78911019 | None:intergenic | 40.0% | |
| TGCTGTGCATAAGATTAGAG+AGG | - | chr7_3:78911143-78911162 | Msa1127340:intron | 40.0% | |
| GTGCATAAGATTAGAGAGGA+AGG | - | chr7_3:78911147-78911166 | Msa1127340:intron | 40.0% | |
| TAGAGAGGAAGGTGAACAAA+AGG | - | chr7_3:78911158-78911177 | Msa1127340:intron | 40.0% | |
| AGAGAGGAAGGTGAACAAAA+GGG | - | chr7_3:78911159-78911178 | Msa1127340:intron | 40.0% | |
| TGATCGGTTAATCTGAGAAC+TGG | + | chr7_3:78911190-78911209 | None:intergenic | 40.0% | |
| GTTCTCAGATTAACCGATCA+AGG | - | chr7_3:78911190-78911209 | Msa1127340:CDS | 40.0% | |
| GAATTAACAGGACTTCTCTG+AGG | + | chr7_3:78911249-78911268 | None:intergenic | 40.0% | |
| AGAGAAGTCCTGTTAATTCC+AGG | - | chr7_3:78911250-78911269 | Msa1127340:CDS | 40.0% | |
| ATACACCTCAGTTTCCTCAA+AGG | - | chr7_3:78911316-78911335 | Msa1127340:CDS | 40.0% | |
| CAAGAGATTCTCAACAAGGT+AGG | - | chr7_3:78911397-78911416 | Msa1127340:CDS | 40.0% | |
| TTATGCCATCGTTAGAAAGC+TGG | - | chr7_3:78911437-78911456 | Msa1127340:CDS | 40.0% | |
| ! | TGTCATTTACTTGCAGCAAG+AGG | - | chr7_3:78911544-78911563 | Msa1127340:intron | 40.0% |
| AGGACGGAGATAATTGTTGA+AGG | + | chr7_3:78911581-78911600 | None:intergenic | 40.0% | |
| TATGGCAATAGTGCATCTAG+AGG | - | chr7_3:78911779-78911798 | Msa1127340:intron | 40.0% | |
| !!! | GAGATTTTGACTGGCTTGAA+CGG | + | chr7_3:78911805-78911824 | None:intergenic | 40.0% |
| !! | CTTGTCTTGGAGATTTTGAC+TGG | + | chr7_3:78911814-78911833 | None:intergenic | 40.0% |
| ATAAGAGTTCCCTGTATGTG+AGG | + | chr7_3:78911837-78911856 | None:intergenic | 40.0% | |
| GTCATAACATGGGCACTTAT+AGG | - | chr7_3:78911876-78911895 | Msa1127340:CDS | 40.0% | |
| ATGGGCACTTATAGGAATGA+CGG | - | chr7_3:78911884-78911903 | Msa1127340:CDS | 40.0% | |
| GATTCTCATAGGAGAGAATC+TGG | - | chr7_3:78911911-78911930 | Msa1127340:CDS | 40.0% | |
| ! | TCCTCTGTTTTACTGTGACT+TGG | - | chr7_3:78912314-78912333 | Msa1127340:intron | 40.0% |
| GTCAACTAGGTCATCTATTG+AGG | + | chr7_3:78912471-78912490 | None:intergenic | 40.0% | |
| GTCAAACAGGTCATCTATTG+AGG | - | chr7_3:78912681-78912700 | Msa1127340:intron | 40.0% | |
| GTTCCACGCATACAAAACAA+TGG | - | chr7_3:78912809-78912828 | Msa1127340:intron | 40.0% | |
| !! | TTCCCATTGTTTTGTATGCG+TGG | + | chr7_3:78912815-78912834 | None:intergenic | 40.0% |
| AACAAATGTCTCCTGGATAC+CGG | - | chr7_3:78912881-78912900 | Msa1127340:intron | 40.0% | |
| AAATTGTTTCCACCATAGGG+AGG | + | chr7_3:78912955-78912974 | None:intergenic | 40.0% | |
| ! | AAATTACCATGAGGCCTTGT+AGG | + | chr7_3:78913024-78913043 | None:intergenic | 40.0% |
| ! | ACAAGGCCTCATGGTAATTT+TGG | - | chr7_3:78913024-78913043 | Msa1127340:intron | 40.0% |
| ATTAGTAGGTTTGGAAGACG+AGG | + | chr7_3:78913134-78913153 | None:intergenic | 40.0% | |
| GAAATAACAACCCAACCTTG+AGG | + | chr7_3:78913268-78913287 | None:intergenic | 40.0% | |
| ACAAACTACAATGTCCCTGT+TGG | + | chr7_3:78913401-78913420 | None:intergenic | 40.0% | |
| TAACACCTACTCGATCAATC+TGG | + | chr7_3:78913498-78913517 | None:intergenic | 40.0% | |
| ATTGAACAAGTCACCGGTAA+TGG | + | chr7_3:78913676-78913695 | None:intergenic | 40.0% | |
| ACAATCAATCCAGGTGTTTG+AGG | - | chr7_3:78913759-78913778 | Msa1127340:five_prime_UTR | 40.0% | |
| AAGGGATAGAAATGGTGTGG+TGG | + | chr7_3:78909419-78909438 | None:intergenic | 45.0% | |
| ACGTAAGTGGAACAAGCGAA+GGG | + | chr7_3:78909437-78909456 | None:intergenic | 45.0% | |
| TACGTAAGTGGAACAAGCGA+AGG | + | chr7_3:78909438-78909457 | None:intergenic | 45.0% | |
| TCGTCGTCAATATCTGGATC+GGG | + | chr7_3:78909516-78909535 | None:intergenic | 45.0% | |
| ! | AAAGAGTACACTGGTCCTGT+AGG | - | chr7_3:78909552-78909571 | Msa1127340:three_prime_UTR | 45.0% |
| TGCTCTCTCTTGAACAGATC+CGG | + | chr7_3:78909580-78909599 | None:intergenic | 45.0% | |
| TCACGGCTTATGAAACCAGT+TGG | + | chr7_3:78909675-78909694 | None:intergenic | 45.0% | |
| ! | ATGCACTCTGTCACACCTTT+TGG | - | chr7_3:78910266-78910285 | Msa1127340:CDS | 45.0% |
| ! | TGCACTCTGTCACACCTTTT+GGG | - | chr7_3:78910267-78910286 | Msa1127340:CDS | 45.0% |
| TAGGGTTGTCCATCTACTCT+TGG | - | chr7_3:78910937-78910956 | Msa1127340:intron | 45.0% | |
| ! | TTAACAGGACTTCTCTGAGG+TGG | + | chr7_3:78911246-78911265 | None:intergenic | 45.0% |
| CGCTGAAACCTGGAATTAAC+AGG | + | chr7_3:78911261-78911280 | None:intergenic | 45.0% | |
| AGAGATCTCATTCTGCACCA+CGG | - | chr7_3:78911292-78911311 | Msa1127340:CDS | 45.0% | |
| ! | CCAAACCTTTGAGGAAACTG+AGG | + | chr7_3:78911324-78911343 | None:intergenic | 45.0% |
| CCTCAGTTTCCTCAAAGGTT+TGG | - | chr7_3:78911321-78911340 | Msa1127340:CDS | 45.0% | |
| AGTTTCCTCAAAGGTTTGGC+AGG | - | chr7_3:78911325-78911344 | Msa1127340:CDS | 45.0% | |
| !! | ACTGAAAGGATTGGCTCCAA+TGG | - | chr7_3:78911612-78911631 | Msa1127340:intron | 45.0% |
| CAAGACAAGCCTCACATACA+GGG | - | chr7_3:78911825-78911844 | Msa1127340:CDS | 45.0% | |
| TGGGCACTTATAGGAATGAC+GGG | - | chr7_3:78911885-78911904 | Msa1127340:CDS | 45.0% | |
| !! | CACTTATAGGAATGACGGGT+GGG | - | chr7_3:78911889-78911908 | Msa1127340:CDS | 45.0% |
| !! | TTGTGATCAAAGTGTTGGCC+AGG | + | chr7_3:78911944-78911963 | None:intergenic | 45.0% |
| ! | GGGCATTGTGATCAAAGTGT+TGG | + | chr7_3:78911949-78911968 | None:intergenic | 45.0% |
| GCCAAGTCACAGTAAAACAG+AGG | + | chr7_3:78912318-78912337 | None:intergenic | 45.0% | |
| CTAGGTCATCTATTGAGGGA+CGG | + | chr7_3:78912466-78912485 | None:intergenic | 45.0% | |
| TATGTGTGTCGGAGTCAACT+AGG | + | chr7_3:78912484-78912503 | None:intergenic | 45.0% | |
| ACAGGTCATCTATTGAGGGA+CGG | - | chr7_3:78912686-78912705 | Msa1127340:intron | 45.0% | |
| !! | TTTTTCAGCTTGATGCCCAG+AGG | - | chr7_3:78912839-78912858 | Msa1127340:intron | 45.0% |
| GCAATCCAACAAATGTCTCC+TGG | - | chr7_3:78912874-78912893 | Msa1127340:intron | 45.0% | |
| GGTATCCAGGAGACATTTGT+TGG | + | chr7_3:78912882-78912901 | None:intergenic | 45.0% | |
| ACAAATGTCTCCTGGATACC+GGG | - | chr7_3:78912882-78912901 | Msa1127340:intron | 45.0% | |
| !! | TACCTTTGGAGTCACGGAAT+AGG | - | chr7_3:78912974-78912993 | Msa1127340:intron | 45.0% |
| AACCTATTCCGTGACTCCAA+AGG | + | chr7_3:78912979-78912998 | None:intergenic | 45.0% | |
| ! | GTATGGAGCCTTATCCTACA+AGG | - | chr7_3:78913007-78913026 | Msa1127340:intron | 45.0% |
| TTTGGTGAATTTCAGAGGCG+TGG | - | chr7_3:78913042-78913061 | Msa1127340:intron | 45.0% | |
| ! | AGATAACTTGCCTTGCCTCA+AGG | - | chr7_3:78913250-78913269 | Msa1127340:intron | 45.0% |
| TGAACAAGAGCCCATAAGGT+AGG | - | chr7_3:78913520-78913539 | Msa1127340:CDS | 45.0% | |
| !! | AACAAGTCACCGGTAATGGA+TGG | + | chr7_3:78913672-78913691 | None:intergenic | 45.0% |
| GTGGAGATCCTATGAATGAC+TGG | - | chr7_3:78913703-78913722 | Msa1127340:CDS | 45.0% | |
| !! | TTAAAAAATAAAAAATTAGT+AGG | + | chr7_3:78913148-78913167 | None:intergenic | 5.0% |
| GCGAAGGGATAGAAATGGTG+TGG | + | chr7_3:78909422-78909441 | None:intergenic | 50.0% | |
| ACTTCCATCGCCGATATCGA+CGG | - | chr7_3:78909463-78909482 | Msa1127340:three_prime_UTR | 50.0% | |
| TGGATCGGGAATATTCGCCA+TGG | + | chr7_3:78909502-78909521 | None:intergenic | 50.0% | |
| TACACTGGTCCTGTAGGATC+CGG | - | chr7_3:78909558-78909577 | Msa1127340:three_prime_UTR | 50.0% | |
| TGAACAGATCCGGATCCTAC+AGG | + | chr7_3:78909570-78909589 | None:intergenic | 50.0% | |
| TAAGCCGTGATGCTAAGGTC+TGG | - | chr7_3:78909685-78909704 | Msa1127340:three_prime_UTR | 50.0% | |
| AAGCCGTGATGCTAAGGTCT+GGG | - | chr7_3:78909686-78909705 | Msa1127340:three_prime_UTR | 50.0% | |
| CTTCCCAGACCTTAGCATCA+CGG | + | chr7_3:78909692-78909711 | None:intergenic | 50.0% | |
| GGTGCAGAATGAGATCTCTG+AGG | + | chr7_3:78911291-78911310 | None:intergenic | 50.0% | |
| GGAAACTGAGGTGTATTCCG+TGG | + | chr7_3:78911312-78911331 | None:intergenic | 50.0% | |
| TCTTGCCTGCCAAACCTTTG+AGG | + | chr7_3:78911333-78911352 | None:intergenic | 50.0% | |
| CAACAAGGTAGGGACAGCTT+AGG | - | chr7_3:78911408-78911427 | Msa1127340:CDS | 50.0% | |
| CCTGTATGTGAGGCTTGTCT+TGG | + | chr7_3:78911827-78911846 | None:intergenic | 50.0% | |
| CCAAGACAAGCCTCACATAC+AGG | - | chr7_3:78911824-78911843 | Msa1127340:CDS | 50.0% | |
| ! | GCACTTATAGGAATGACGGG+TGG | - | chr7_3:78911888-78911907 | Msa1127340:CDS | 50.0% |
| !! | ATGACGGGTGGGATTCTCAT+AGG | - | chr7_3:78911900-78911919 | Msa1127340:CDS | 50.0% |
| AGAGAATCTGGCATCCAACC+TGG | - | chr7_3:78911923-78911942 | Msa1127340:CDS | 50.0% | |
| !! | GATCAAAGTGTTGGCCAGGT+TGG | + | chr7_3:78911940-78911959 | None:intergenic | 50.0% |
| ACATCGTGAGGTGCGTTCAT+TGG | - | chr7_3:78912066-78912085 | Msa1127340:CDS | 50.0% | |
| GTCATCTATTGAGGGACGGA+GGG | + | chr7_3:78912690-78912709 | None:intergenic | 50.0% | |
| GTCATCTATTGAGGGACGGA+GGG | - | chr7_3:78912690-78912709 | Msa1127340:intron | 50.0% | |
| !! | TGCTTGTTGTTGACGCCTCT+GGG | + | chr7_3:78912857-78912876 | None:intergenic | 50.0% |
| !! | TTGCTTGTTGTTGACGCCTC+TGG | + | chr7_3:78912858-78912877 | None:intergenic | 50.0% |
| CAAATGTCTCCTGGATACCG+GGG | - | chr7_3:78912883-78912902 | Msa1127340:intron | 50.0% | |
| TGTTTATAGCCCCGGTATCC+AGG | + | chr7_3:78912895-78912914 | None:intergenic | 50.0% | |
| TCTCCTGTCAATCCTCCCTA+TGG | - | chr7_3:78912940-78912959 | Msa1127340:intron | 50.0% | |
| ! | CCATGAGGCCTTGTAGGATA+AGG | + | chr7_3:78913018-78913037 | None:intergenic | 50.0% |
| CCTTATCCTACAAGGCCTCA+TGG | - | chr7_3:78913015-78913034 | Msa1127340:intron | 50.0% | |
| GTAGGTTTGGAAGACGAGGT+CGG | + | chr7_3:78913130-78913149 | None:intergenic | 50.0% | |
| AACTTGCCTTGCCTCAAGGT+TGG | - | chr7_3:78913254-78913273 | Msa1127340:intron | 50.0% | |
| ACTTGCCTTGCCTCAAGGTT+GGG | - | chr7_3:78913255-78913274 | Msa1127340:intron | 50.0% | |
| AACAACCCAACCTTGAGGCA+AGG | + | chr7_3:78913263-78913282 | None:intergenic | 50.0% | |
| AGGGTCCAGATTGATCGAGT+AGG | - | chr7_3:78913490-78913509 | Msa1127340:CDS | 50.0% | |
| TTGGGAAGGGACATGCATTC+TGG | - | chr7_3:78913567-78913586 | Msa1127340:CDS | 50.0% | |
| GCATCCCATGTGTGTTCTTG+TGG | - | chr7_3:78913781-78913800 | Msa1127340:five_prime_UTR | 50.0% | |
| CTTTCCGTCGATATCGGCGA+TGG | + | chr7_3:78909470-78909489 | None:intergenic | 55.0% | |
| ! | GAGGTGGTGGTGACCTTGAT+CGG | + | chr7_3:78911206-78911225 | None:intergenic | 55.0% |
| ! | GAGGTGGTGGTGACCTTGAT+CGG | + | chr7_3:78911206-78911225 | None:intergenic | 55.0% |
| !! | ACAGGACTTCTCTGAGGTGG+TGG | + | chr7_3:78911243-78911262 | None:intergenic | 55.0% |
| GGTCATCTATTGAGGGACGG+AGG | + | chr7_3:78912689-78912708 | None:intergenic | 55.0% | |
| GGTCATCTATTGAGGGACGG+AGG | - | chr7_3:78912689-78912708 | Msa1127340:intron | 55.0% | |
| CCACCATAGGGAGGATTGAC+AGG | + | chr7_3:78912946-78912965 | None:intergenic | 55.0% | |
| CCTGTCAATCCTCCCTATGG+TGG | - | chr7_3:78912943-78912962 | Msa1127340:intron | 55.0% | |
| TACGGCTCGACGACCAGTAT+CGG | + | chr7_3:78913309-78913328 | None:intergenic | 55.0% | |
| CATGGGATGCCTCAAACACC+TGG | + | chr7_3:78913771-78913790 | None:intergenic | 55.0% | |
| CACCACCACCTCACCGATCA+AGG | - | chr7_3:78911214-78911233 | Msa1127340:CDS | 60.0% | |
| GACCTTGATCGGTGAGGTGG+TGG | + | chr7_3:78911219-78911238 | None:intergenic | 60.0% | |
| GGTGACCTTGATCGGTGAGG+TGG | + | chr7_3:78911222-78911241 | None:intergenic | 60.0% | |
| GGTGGTGACCTTGATCGGTG+AGG | + | chr7_3:78911225-78911244 | None:intergenic | 60.0% | |
| !! | AGGCTCAGAGCGCTGAAACC+TGG | + | chr7_3:78911271-78911290 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 78909366 | 78913871 | 78909366 | ID=Msa1127340;Name=Msa1127340 |
| chr7_3 | mRNA | 78909366 | 78913871 | 78909366 | ID=Msa1127340-mRNA-1;Parent=Msa1127340;Name=Msa1127340-mRNA-1;_AED=0.19;_eAED=0.19;_QI=135|0.8|0.5|1|0.8|0.66|6|398|495 |
| chr7_3 | exon | 78909366 | 78909745 | 78909366 | ID=Msa1127340-mRNA-1:exon:22233;Parent=Msa1127340-mRNA-1 |
| chr7_3 | exon | 78910124 | 78910477 | 78910124 | ID=Msa1127340-mRNA-1:exon:22232;Parent=Msa1127340-mRNA-1 |
| chr7_3 | exon | 78911162 | 78911489 | 78911162 | ID=Msa1127340-mRNA-1:exon:22231;Parent=Msa1127340-mRNA-1 |
| chr7_3 | exon | 78911632 | 78911677 | 78911632 | ID=Msa1127340-mRNA-1:exon:22230;Parent=Msa1127340-mRNA-1 |
| chr7_3 | exon | 78911823 | 78912297 | 78911823 | ID=Msa1127340-mRNA-1:exon:22229;Parent=Msa1127340-mRNA-1 |
| chr7_3 | exon | 78913434 | 78913871 | 78913434 | ID=Msa1127340-mRNA-1:exon:22228;Parent=Msa1127340-mRNA-1 |
| chr7_3 | five_prime_UTR | 78913737 | 78913871 | 78913737 | ID=Msa1127340-mRNA-1:five_prime_utr;Parent=Msa1127340-mRNA-1 |
| chr7_3 | CDS | 78913434 | 78913736 | 78913434 | ID=Msa1127340-mRNA-1:cds;Parent=Msa1127340-mRNA-1 |
| chr7_3 | CDS | 78911823 | 78912297 | 78911823 | ID=Msa1127340-mRNA-1:cds;Parent=Msa1127340-mRNA-1 |
| chr7_3 | CDS | 78911632 | 78911677 | 78911632 | ID=Msa1127340-mRNA-1:cds;Parent=Msa1127340-mRNA-1 |
| chr7_3 | CDS | 78911162 | 78911489 | 78911162 | ID=Msa1127340-mRNA-1:cds;Parent=Msa1127340-mRNA-1 |
| chr7_3 | CDS | 78910142 | 78910477 | 78910142 | ID=Msa1127340-mRNA-1:cds;Parent=Msa1127340-mRNA-1 |
| chr7_3 | three_prime_UTR | 78910124 | 78910141 | 78910124 | ID=Msa1127340-mRNA-1:three_prime_utr;Parent=Msa1127340-mRNA-1 |
| chr7_3 | three_prime_UTR | 78909366 | 78909745 | 78909366 | ID=Msa1127340-mRNA-1:three_prime_utr;Parent=Msa1127340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
