Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082620 | XP_024626292.1 | 92.121 | 495 | 14 | 2 | 1 | 495 | 1 | 470 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082620 | I3T416 | 91.313 | 495 | 16 | 2 | 1 | 495 | 1 | 468 | 0.0 | 800 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1082620 | Msa1127340 | 0.890412 | 1.008512e-73 | -8.615850e-47 |
| Msa0526890 | Msa1082620 | 0.823194 | 1.579647e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082620 | MtrunA17_Chr7g0270211 | 91.717 | 495 | 14 | 2 | 1 | 495 | 1 | 468 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082620 | AT3G62330.1 | 50.996 | 502 | 205 | 11 | 6 | 495 | 7 | 479 | 1.43e-138 | 408 |
| Msa1082620 | AT3G62330.2 | 51.804 | 388 | 152 | 7 | 6 | 388 | 7 | 364 | 1.77e-111 | 335 |
Find 157 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGGCCTCATGGTAATTT+TGG | 0.176506 | 7_2:+82730849 | Msa1082620:CDS |
| AACTCTTATAATTCATTTAA+TGG | 0.181957 | 7_2:+82729673 | Msa1082620:CDS |
| ATCCAGTTTCTTGTTTAATA+TGG | 0.206073 | 7_2:+82731422 | Msa1082620:three_prime_UTR |
| CCAAAGCTACTGAGAGAAAT+TGG | 0.250333 | 7_2:+82727542 | Msa1082620:CDS |
| CAACATACTTACCTACCTTA+TGG | 0.254054 | 7_2:-82731356 | None:intergenic |
| CTAAAATCGTCGTCAATATC+TGG | 0.261155 | 7_2:-82727343 | None:intergenic |
| TCTTCATTTCGTGAAGCTTA+TGG | 0.267831 | 7_2:+82729586 | Msa1082620:CDS |
| TTGCTTGTTGTTGACGCCTC+TGG | 0.269586 | 7_2:-82730680 | None:intergenic |
| CTTACATTTCTGTCTCTTGC+AGG | 0.289233 | 7_2:-82728822 | None:intergenic |
| TAAGTATGTTGATTAATCTT+AGG | 0.289447 | 7_2:+82731368 | Msa1082620:three_prime_UTR |
| ATTAGAGTTAGAGTATAAAA+AGG | 0.294208 | 7_2:+82729813 | Msa1082620:CDS |
| GTCATAACATGGGCACTTAT+AGG | 0.296537 | 7_2:+82729701 | Msa1082620:CDS |
| CCAATTTCTCTCAGTAGCTT+TGG | 0.319678 | 7_2:-82727542 | None:intergenic |
| AAAATTCTTTCCGTCGATAT+CGG | 0.325673 | 7_2:-82727297 | None:intergenic |
| TTGGGAAGGGACATGCATTC+TGG | 0.338059 | 7_2:+82731392 | Msa1082620:three_prime_UTR |
| AATCTTACTTATAACTTTCT+CGG | 0.338549 | 7_2:-82728856 | None:intergenic |
| AGAGAAGTCCTGTTAATTCC+AGG | 0.343211 | 7_2:+82729075 | Msa1082620:CDS |
| TAGAGAGGAAGGTGAACAAA+AGG | 0.344612 | 7_2:+82728983 | Msa1082620:CDS |
| CCTTTCAGTAAATACTCTTC+AGG | 0.347913 | 7_2:-82729423 | None:intergenic |
| TTGTTTGCTCCAAGAGTAGA+TGG | 0.354982 | 7_2:-82728771 | None:intergenic |
| TGTAAATTATGTGGTGAATC+TGG | 0.363570 | 7_2:+82727592 | Msa1082620:CDS |
| AACATACTTACCTACCTTAT+GGG | 0.365752 | 7_2:-82731355 | None:intergenic |
| TGCTCTCTCTTGAACAGATC+CGG | 0.368116 | 7_2:-82727401 | None:intergenic |
| TAGGGTTGTCCATCTACTCT+TGG | 0.383053 | 7_2:+82728762 | Msa1082620:intron |
| CATTGTTTACCATCCATTAC+CGG | 0.384194 | 7_2:+82731485 | Msa1082620:three_prime_UTR |
| AAATTACCATGAGGCCTTGT+AGG | 0.384732 | 7_2:-82730846 | None:intergenic |
| TGCTTGTTGTTGACGCCTCT+GGG | 0.385578 | 7_2:-82730679 | None:intergenic |
| TCTTGCCTGCCAAACCTTTG+AGG | 0.393160 | 7_2:-82729155 | None:intergenic |
| AACCATATTAAACAAGAAAC+TGG | 0.396810 | 7_2:-82731424 | None:intergenic |
| GGTATCCAGGAGACATTTGT+TGG | 0.400337 | 7_2:-82730704 | None:intergenic |
| TGCATAGACAGAAATGTTAC+TGG | 0.409179 | 7_2:-82731652 | None:intergenic |
| AAACCAGTTGGAATAGCATT+AGG | 0.410070 | 7_2:-82727484 | None:intergenic |
| CCTGTATGTGAGGCTTGTCT+TGG | 0.411871 | 7_2:-82729649 | None:intergenic |
| AAAATCAACCAGTCATTCAT+AGG | 0.420779 | 7_2:-82731536 | None:intergenic |
| GAGAAATTCATTATTGTTAG+TGG | 0.425015 | 7_2:+82728912 | Msa1082620:CDS |
| GATCCTAATGCTATTCCAAC+TGG | 0.426095 | 7_2:+82727481 | Msa1082620:CDS |
| ATTGAACAAGTCACCGGTAA+TGG | 0.427965 | 7_2:-82731498 | None:intergenic |
| CGCTGAAACCTGGAATTAAC+AGG | 0.429154 | 7_2:-82729083 | None:intergenic |
| TACCTTTGGAGTCACGGAAT+AGG | 0.431804 | 7_2:+82730799 | Msa1082620:CDS |
| TGGTGGAAACAATTTACCTT+TGG | 0.432200 | 7_2:+82730785 | Msa1082620:CDS |
| AGGTAAATTGTTTCCACCAT+AGG | 0.433472 | 7_2:-82730781 | None:intergenic |
| TGGTAAGGATAGGTTAGTTA+TGG | 0.433855 | 7_2:+82728932 | Msa1082620:CDS |
| CCACCATAGGGAGGATTGAC+AGG | 0.436236 | 7_2:-82730768 | None:intergenic |
| CCTCAGTTTCCTCAAAGGTT+TGG | 0.436272 | 7_2:+82729146 | Msa1082620:CDS |
| AACAAATGTCTCCTGGATAC+CGG | 0.439748 | 7_2:+82730706 | Msa1082620:CDS |
| CCAAGACAAGCCTCACATAC+AGG | 0.441668 | 7_2:+82729649 | Msa1082620:CDS |
| ATTCATTATTGTTAGTGGTA+AGG | 0.444515 | 7_2:+82728917 | Msa1082620:CDS |
| GAATAGGTTCTCAAACAGTA+TGG | 0.448781 | 7_2:+82730815 | Msa1082620:CDS |
| TGTTTATAGCCCCGGTATCC+AGG | 0.457359 | 7_2:-82730717 | None:intergenic |
| GATTCTCATAGGAGAGAATC+TGG | 0.460700 | 7_2:+82729736 | Msa1082620:CDS |
| AGAGAGCAAAATCGAACAAA+AGG | 0.462268 | 7_2:+82727416 | Msa1082620:CDS |
| TGTTGATTAATCTTAGGATT+GGG | 0.463338 | 7_2:+82731374 | Msa1082620:three_prime_UTR |
| ACAAATGTCTCCTGGATACC+GGG | 0.466554 | 7_2:+82730707 | Msa1082620:CDS |
| TGATCGGTTAATCTGAGAAC+TGG | 0.471571 | 7_2:-82729012 | None:intergenic |
| ATGTTGATTAATCTTAGGAT+TGG | 0.473640 | 7_2:+82731373 | Msa1082620:three_prime_UTR |
| AGTTTCCTCAAAGGTTTGGC+AGG | 0.474360 | 7_2:+82729150 | Msa1082620:CDS |
| TGCTTTGTTACAATCAATCC+AGG | 0.474930 | 7_2:+82731575 | Msa1082620:three_prime_UTR |
| GGTAAATTGTTTCCACCATA+GGG | 0.480049 | 7_2:-82730780 | None:intergenic |
| TAAGCCGTGATGCTAAGGTC+TGG | 0.480801 | 7_2:+82727509 | Msa1082620:CDS |
| CATGGGATGCCTCAAACACC+TGG | 0.481125 | 7_2:-82731593 | None:intergenic |
| AAGTTATAAGTAAGATTGAA+AGG | 0.483840 | 7_2:+82728862 | Msa1082620:CDS |
| TAACACCTACTCGATCAATC+TGG | 0.483908 | 7_2:-82731320 | None:intergenic |
| CCATGAGGCCTTGTAGGATA+AGG | 0.486332 | 7_2:-82730840 | None:intergenic |
| GCATCCCATGTGTGTTCTTG+TGG | 0.487622 | 7_2:+82731606 | Msa1082620:three_prime_UTR |
| ATGACGGGTGGGATTCTCAT+AGG | 0.491698 | 7_2:+82729725 | Msa1082620:CDS |
| TACACTGGTCCTGTAGGATC+CGG | 0.492783 | 7_2:+82727382 | Msa1082620:CDS |
| TAAATGAACAAGAGCCCATA+AGG | 0.493278 | 7_2:+82731341 | Msa1082620:three_prime_UTR |
| ACAATCAATCCAGGTGTTTG+AGG | 0.495827 | 7_2:+82731584 | Msa1082620:three_prime_UTR |
| TCGTCGTCAATATCTGGATC+GGG | 0.501317 | 7_2:-82727337 | None:intergenic |
| ACAATTTACCTTTGGAGTCA+CGG | 0.501550 | 7_2:+82730793 | Msa1082620:CDS |
| CACTTATAGGAATGACGGGT+GGG | 0.501869 | 7_2:+82729714 | Msa1082620:CDS |
| TTGTGATCAAAGTGTTGGCC+AGG | 0.507335 | 7_2:-82729766 | None:intergenic |
| GCAATCCAACAAATGTCTCC+TGG | 0.514307 | 7_2:+82730699 | Msa1082620:CDS |
| AAGCCGTGATGCTAAGGTCT+GGG | 0.517930 | 7_2:+82727510 | Msa1082620:CDS |
| GAGGTGGTGGTGACCTTGAT+CGG | 0.519039 | 7_2:-82729052 | None:intergenic |
| AGGACGGAGATAATTGTTGA+AGG | 0.519761 | 7_2:-82729403 | None:intergenic |
| AGTTATAAGTAAGATTGAAA+GGG | 0.520213 | 7_2:+82728863 | Msa1082620:CDS |
| ATCGTCGTCAATATCTGGAT+CGG | 0.521045 | 7_2:-82727338 | None:intergenic |
| TCTCCTGTCAATCCTCCCTA+TGG | 0.523647 | 7_2:+82730765 | Msa1082620:CDS |
| GACTTGTTCAATGATATTTG+TGG | 0.532061 | 7_2:+82731509 | Msa1082620:three_prime_UTR |
| TTCCACGCATACAAAACAAT+GGG | 0.537109 | 7_2:+82730635 | Msa1082620:CDS |
| CATTGGCTGCAAAATTAAGA+TGG | 0.539929 | 7_2:+82728887 | Msa1082620:CDS |
| TTTCATAAGCCGTGATGCTA+AGG | 0.540938 | 7_2:+82727504 | Msa1082620:CDS |
| GTTCTCAGATTAACCGATCA+AGG | 0.541651 | 7_2:+82729015 | Msa1082620:CDS |
| GACCTTGATCGGTGAGGTGG+TGG | 0.542651 | 7_2:-82729041 | None:intergenic |
| TATGTAAGTGGAACAAGCGA+AGG | 0.544367 | 7_2:-82727259 | None:intergenic |
| CACCACCACCTCACCGATCA+AGG | 0.546549 | 7_2:+82729039 | Msa1082620:CDS |
| AGTAAGATTGAAAGGGACAT+TGG | 0.550835 | 7_2:+82728870 | Msa1082620:CDS |
| AGAGAATCTGGCATCCAACC+TGG | 0.552227 | 7_2:+82729748 | Msa1082620:CDS |
| CTTTCCGTCGATATCGGCGA+TGG | 0.556581 | 7_2:-82727291 | None:intergenic |
| CTTCCCAGACCTTAGCATCA+CGG | 0.556692 | 7_2:-82727513 | None:intergenic |
| TGAACAGATCCGGATCCTAC+AGG | 0.557652 | 7_2:-82727391 | None:intergenic |
| TAATGGACAAAGTCATAACA+TGG | 0.557743 | 7_2:+82729690 | Msa1082620:CDS |
| TTTGGTGAATTTCAGAGGCG+TGG | 0.562193 | 7_2:+82730867 | Msa1082620:CDS |
| CCTGTCAATCCTCCCTATGG+TGG | 0.562319 | 7_2:+82730768 | Msa1082620:CDS |
| TTATTGTTAGTGGTAAGGAT+AGG | 0.562634 | 7_2:+82728922 | Msa1082620:CDS |
| ATTCTTCTAGAGTATGAAGT+GGG | 0.563036 | 7_2:-82729792 | None:intergenic |
| AGTCTCAAGAATTATTTCAA+AGG | 0.563474 | 7_2:+82728796 | Msa1082620:CDS |
| GTGGAGATCCTATGAATGAC+TGG | 0.564154 | 7_2:+82731528 | Msa1082620:three_prime_UTR |
| GAGGTGGTGGTGACCTTGAT+CGG | 0.565416 | 7_2:-82729028 | None:intergenic |
| GATTAATCTTAGGATTGGGA+AGG | 0.565438 | 7_2:+82731378 | Msa1082620:three_prime_UTR |
| ACAGGACTTCTCTGAGGTGG+TGG | 0.567295 | 7_2:-82729065 | None:intergenic |
| ACTTCCATCGCCGATATCGA+CGG | 0.568281 | 7_2:+82727287 | Msa1082620:five_prime_UTR |
| CCTTATCCTACAAGGCCTCA+TGG | 0.568761 | 7_2:+82730840 | Msa1082620:CDS |
| GATAGGTTAGTTATGGCTAA+AGG | 0.569288 | 7_2:+82728939 | Msa1082620:CDS |
| ATACACCTCAGTTTCCTCAA+AGG | 0.570797 | 7_2:+82729141 | Msa1082620:CDS |
| GACCAGTGTACTCTTTGTAT+AGG | 0.573298 | 7_2:-82727369 | None:intergenic |
| GAAATGATTTGTAAATTATG+TGG | 0.573666 | 7_2:+82727583 | Msa1082620:CDS |
| AACAAGCGAAGGGATAGAAA+TGG | 0.577091 | 7_2:-82727248 | None:intergenic |
| AGAGAGGAAGGTGAACAAAA+GGG | 0.582535 | 7_2:+82728984 | Msa1082620:CDS |
| ATGGGCACTTATAGGAATGA+CGG | 0.583334 | 7_2:+82729709 | Msa1082620:CDS |
| TCGAACAAAAGGTCAAATGC+AGG | 0.585317 | 7_2:+82727427 | Msa1082620:CDS |
| TTTGAGTGTCGTCGCGAACA+CGG | 0.586283 | 7_2:-82729193 | None:intergenic |
| ATTAATCTTAGGATTGGGAA+GGG | 0.586388 | 7_2:+82731379 | Msa1082620:three_prime_UTR |
| TGGGCACTTATAGGAATGAC+GGG | 0.587886 | 7_2:+82729710 | Msa1082620:CDS |
| TCACGGCTTATGAAACCAGT+TGG | 0.589003 | 7_2:-82727496 | None:intergenic |
| CAAGACAAGCCTCACATACA+GGG | 0.589341 | 7_2:+82729650 | Msa1082620:CDS |
| AACAAGTCACCGGTAATGGA+TGG | 0.590373 | 7_2:-82731494 | None:intergenic |
| GATCAAAGTGTTGGCCAGGT+TGG | 0.598440 | 7_2:-82729762 | None:intergenic |
| GTGCATAAGATTAGAGAGGA+AGG | 0.603186 | 7_2:+82728972 | Msa1082620:CDS |
| AAAATCCACAAGAACACACA+TGG | 0.604152 | 7_2:-82731611 | None:intergenic |
| ATAAGAGTTCCCTGTATGTG+AGG | 0.605160 | 7_2:-82729659 | None:intergenic |
| AGAAAATTTAAAACATCGTG+AGG | 0.606495 | 7_2:+82729879 | Msa1082620:CDS |
| AAAGAGTACACTGGTCCTGT+AGG | 0.608456 | 7_2:+82727376 | Msa1082620:CDS |
| GTATGGAGCCTTATCCTACA+AGG | 0.609509 | 7_2:+82730832 | Msa1082620:CDS |
| ATGTAAGTGGAACAAGCGAA+GGG | 0.617196 | 7_2:-82727258 | None:intergenic |
| AATATCATTGAACAAGTCAC+CGG | 0.617462 | 7_2:-82731504 | None:intergenic |
| GGTGACCTTGATCGGTGAGG+TGG | 0.622749 | 7_2:-82729044 | None:intergenic |
| TGAACAAGAGCCCATAAGGT+AGG | 0.625975 | 7_2:+82731345 | Msa1082620:three_prime_UTR |
| TTTGCAAGAGATTCTCAACA+AGG | 0.632870 | 7_2:+82729218 | Msa1082620:CDS |
| GTTCCACGCATACAAAACAA+TGG | 0.633278 | 7_2:+82730634 | Msa1082620:CDS |
| AACCTATTCCGTGACTCCAA+AGG | 0.634103 | 7_2:-82730801 | None:intergenic |
| CCAAACCTTTGAGGAAACTG+AGG | 0.639849 | 7_2:-82729146 | None:intergenic |
| GGGCATTGTGATCAAAGTGT+TGG | 0.639911 | 7_2:-82729771 | None:intergenic |
| TGGATCGGGAATATTCGCCA+TGG | 0.639958 | 7_2:-82727323 | None:intergenic |
| AGGGTCCAGATTGATCGAGT+AGG | 0.646824 | 7_2:+82731315 | Msa1082620:intron |
| TTAACAGGACTTCTCTGAGG+TGG | 0.648118 | 7_2:-82729068 | None:intergenic |
| AAATTGTTTCCACCATAGGG+AGG | 0.648306 | 7_2:-82730777 | None:intergenic |
| GCGAAGGGATAGAAATGGTG+TGG | 0.657806 | 7_2:-82727243 | None:intergenic |
| AATTCTTCTAGAGTATGAAG+TGG | 0.658102 | 7_2:-82729793 | None:intergenic |
| TCAGTAAATACTCTTCAGGA+CGG | 0.664329 | 7_2:-82729419 | None:intergenic |
| GCACTTATAGGAATGACGGG+TGG | 0.665483 | 7_2:+82729713 | Msa1082620:CDS |
| TGAATCTGGACATTTCACTC+AGG | 0.665910 | 7_2:+82727606 | Msa1082620:CDS |
| TGCTGTGCATAAGATTAGAG+AGG | 0.673202 | 7_2:+82728968 | Msa1082620:CDS |
| AGAGATCTCATTCTGCACCA+CGG | 0.677131 | 7_2:+82729117 | Msa1082620:CDS |
| TATGGCAATAGTGCATCTAG+AGG | 0.677224 | 7_2:+82729604 | Msa1082620:CDS |
| CAAATGTCTCCTGGATACCG+GGG | 0.678032 | 7_2:+82730708 | Msa1082620:CDS |
| AAATCCACAAGAACACACAT+GGG | 0.684863 | 7_2:-82731610 | None:intergenic |
| GGTGGTGACCTTGATCGGTG+AGG | 0.695267 | 7_2:-82729047 | None:intergenic |
| GACCTATACAAAGAGTACAC+TGG | 0.695798 | 7_2:+82727367 | Msa1082620:CDS |
| AATGGACAAAGTCATAACAT+GGG | 0.697735 | 7_2:+82729691 | Msa1082620:CDS |
| TTCTTCTAGAGTATGAAGTG+GGG | 0.701789 | 7_2:-82729791 | None:intergenic |
| GAATTAACAGGACTTCTCTG+AGG | 0.710369 | 7_2:-82729071 | None:intergenic |
| AATTCACCAAAATTACCATG+AGG | 0.715488 | 7_2:-82730855 | None:intergenic |
| AAGGGATAGAAATGGTGTGG+TGG | 0.721146 | 7_2:-82727240 | None:intergenic |
| GGTGCAGAATGAGATCTCTG+AGG | 0.729093 | 7_2:-82729113 | None:intergenic |
| GGAAACTGAGGTGTATTCCG+TGG | 0.758876 | 7_2:-82729134 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAGAATTACAAAAAA+CGG | - | chr7_2:82730548-82730567 | None:intergenic | 10.0% |
| !!! | GATAAAAAGAATTTTAATAT+CGG | - | chr7_2:82730914-82730933 | None:intergenic | 10.0% |
| !! | TATTATTGTACTTACAATTT+AGG | + | chr7_2:82728743-82728762 | Msa1082620:intron | 15.0% |
| !! | ATTATTGTACTTACAATTTA+GGG | + | chr7_2:82728744-82728763 | Msa1082620:intron | 15.0% |
| !! | AACTCTTATAATTCATTTAA+TGG | + | chr7_2:82729673-82729692 | Msa1082620:CDS | 15.0% |
| !!! | TTAAAATTCTTTTTATCAAG+TGG | + | chr7_2:82730917-82730936 | Msa1082620:exon | 15.0% |
| !! | AAATAAAAAATTAGTAGGTT+TGG | - | chr7_2:82730968-82730987 | None:intergenic | 15.0% |
| !!! | AAATTTTGTTCAAAATCTTT+TGG | + | chr7_2:82730992-82731011 | Msa1082620:intron | 15.0% |
| !!! | GAAATGATTTGTAAATTATG+TGG | + | chr7_2:82727583-82727602 | Msa1082620:CDS | 20.0% |
| !! | TAATTTCTACAAGATATCTT+AGG | + | chr7_2:82727916-82727935 | Msa1082620:intron | 20.0% |
| !! | AAGGTATACTGAAAAATTTA+TGG | - | chr7_2:82728147-82728166 | None:intergenic | 20.0% |
| !!! | AGTTATAAGCTATTTTAGTA+AGG | - | chr7_2:82728166-82728185 | None:intergenic | 20.0% |
| !! | AGAATATTATTAATCAGCTA+AGG | - | chr7_2:82728296-82728315 | None:intergenic | 20.0% |
| !! | ATATCGTACTTGAAAATTTA+GGG | + | chr7_2:82728339-82728358 | Msa1082620:intron | 20.0% |
| !! | AATGGATAAATAACTTAGTT+AGG | - | chr7_2:82728404-82728423 | None:intergenic | 20.0% |
| !! | ATAATATCAGTCAACTAAAA+CGG | - | chr7_2:82728729-82728748 | None:intergenic | 20.0% |
| !! | AATCTTACTTATAACTTTCT+CGG | - | chr7_2:82728859-82728878 | None:intergenic | 20.0% |
| !! | AAGTTATAAGTAAGATTGAA+AGG | + | chr7_2:82728862-82728881 | Msa1082620:CDS | 20.0% |
| !! | AGTTATAAGTAAGATTGAAA+GGG | + | chr7_2:82728863-82728882 | Msa1082620:CDS | 20.0% |
| !! | TTAAAGAAAATCATCTATGT+TGG | + | chr7_2:82729536-82729555 | Msa1082620:intron | 20.0% |
| !! | ATTAGAGTTAGAGTATAAAA+AGG | + | chr7_2:82729813-82729832 | Msa1082620:CDS | 20.0% |
| !!! | AAAACAAATGATTGTTGTTT+AGG | - | chr7_2:82729946-82729965 | None:intergenic | 20.0% |
| !! | TGTGAATTAGTAGAAAAATA+TGG | + | chr7_2:82730453-82730472 | Msa1082620:intron | 20.0% |
| !! | AATAATGTATATTGTCAAAC+AGG | + | chr7_2:82730493-82730512 | Msa1082620:intron | 20.0% |
| !!! | ATATTTTGTTTATTGCTTGA+AGG | + | chr7_2:82730563-82730582 | Msa1082620:intron | 20.0% |
| !!! | TAAGTATGTTGATTAATCTT+AGG | + | chr7_2:82731368-82731387 | Msa1082620:three_prime_UTR | 20.0% |
| !! | AATTCTGTCATTTGTATTAC+AGG | + | chr7_2:82727636-82727655 | Msa1082620:intron | 25.0% |
| !!! | CTTGTTTTTGATAAGCTTAT+TGG | - | chr7_2:82727949-82727968 | None:intergenic | 25.0% |
| ! | GATATCGTACTTGAAAATTT+AGG | + | chr7_2:82728338-82728357 | Msa1082620:intron | 25.0% |
| ! | ACTAAGTTATTTATCCATTC+AGG | + | chr7_2:82728405-82728424 | Msa1082620:intron | 25.0% |
| ! | CTAAGTTATTTATCCATTCA+GGG | + | chr7_2:82728406-82728425 | Msa1082620:intron | 25.0% |
| !! | AATAAGTTGAAAACAACTGA+TGG | - | chr7_2:82728545-82728564 | None:intergenic | 25.0% |
| ! | AGTCTCAAGAATTATTTCAA+AGG | + | chr7_2:82728796-82728815 | Msa1082620:CDS | 25.0% |
| ! | GAGAAATTCATTATTGTTAG+TGG | + | chr7_2:82728912-82728931 | Msa1082620:CDS | 25.0% |
| ! | ATTCATTATTGTTAGTGGTA+AGG | + | chr7_2:82728917-82728936 | Msa1082620:CDS | 25.0% |
| !! | AGAAAATTTAAAACATCGTG+AGG | + | chr7_2:82729879-82729898 | Msa1082620:CDS | 25.0% |
| !! | ATACTAAAACCTGTCTTTTT+AGG | + | chr7_2:82729997-82730016 | Msa1082620:intron | 25.0% |
| !! | TGATTTTCTTTTGTCAGTTA+TGG | + | chr7_2:82730064-82730083 | Msa1082620:intron | 25.0% |
| !!! | TAGTAGACAAGTTTTAATGA+AGG | + | chr7_2:82730087-82730106 | Msa1082620:intron | 25.0% |
| !!! | AGTAGACAAGTTTTAATGAA+GGG | + | chr7_2:82730088-82730107 | Msa1082620:intron | 25.0% |
| !!! | AGTTCTGAGTAATTATAACT+AGG | - | chr7_2:82730116-82730135 | None:intergenic | 25.0% |
| ! | CAAAGATAAAACATATGCAT+TGG | - | chr7_2:82730332-82730351 | None:intergenic | 25.0% |
| ! | AATATCATGTAAGATGTTGT+TGG | - | chr7_2:82730424-82730443 | None:intergenic | 25.0% |
| !! | CTATAAACAGCAAAATTTTG+CGG | + | chr7_2:82730731-82730750 | Msa1082620:CDS | 25.0% |
| !!! | TCCTTTTAACTGTAAATATG+AGG | + | chr7_2:82731016-82731035 | Msa1082620:intron | 25.0% |
| ! | TCCTCATATTTACAGTTAAA+AGG | - | chr7_2:82731020-82731039 | None:intergenic | 25.0% |
| ! | ATCAACAATATCACAGAATA+CGG | - | chr7_2:82731152-82731171 | None:intergenic | 25.0% |
| !! | ATGTTGATTAATCTTAGGAT+TGG | + | chr7_2:82731373-82731392 | Msa1082620:three_prime_UTR | 25.0% |
| !! | TGTTGATTAATCTTAGGATT+GGG | + | chr7_2:82731374-82731393 | Msa1082620:three_prime_UTR | 25.0% |
| !! | ATCCAGTTTCTTGTTTAATA+TGG | + | chr7_2:82731422-82731441 | Msa1082620:three_prime_UTR | 25.0% |
| ! | AACCATATTAAACAAGAAAC+TGG | - | chr7_2:82731427-82731446 | None:intergenic | 25.0% |
| !!! | TGGAAGTAGTTTTATGTAAG+TGG | - | chr7_2:82727274-82727293 | None:intergenic | 30.0% |
| AAAATTCTTTCCGTCGATAT+CGG | - | chr7_2:82727300-82727319 | None:intergenic | 30.0% | |
| TGTAAATTATGTGGTGAATC+TGG | + | chr7_2:82727592-82727611 | Msa1082620:CDS | 30.0% | |
| !!! | GTTTAAGTGTCATTTTACTC+AGG | + | chr7_2:82727695-82727714 | Msa1082620:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr7_2:82727835-82727854 | Msa1082620:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr7_2:82727836-82727855 | Msa1082620:intron | 30.0% |
| ACTAACCTATTTATCCAAAC+AGG | + | chr7_2:82728041-82728060 | Msa1082620:intron | 30.0% | |
| CTAACCTATTTATCCAAACA+GGG | + | chr7_2:82728042-82728061 | Msa1082620:intron | 30.0% | |
| TAATCAGCTAAGGACTTATT+TGG | - | chr7_2:82728286-82728305 | None:intergenic | 30.0% | |
| ! | TATCATACTCAAAGGGTATA+TGG | - | chr7_2:82728369-82728388 | None:intergenic | 30.0% |
| ATGCGATTATCATACTCAAA+GGG | - | chr7_2:82728376-82728395 | None:intergenic | 30.0% | |
| AATGCGATTATCATACTCAA+AGG | - | chr7_2:82728377-82728396 | None:intergenic | 30.0% | |
| CAATCAACTAAGATCTTGTT+CGG | - | chr7_2:82728689-82728708 | None:intergenic | 30.0% | |
| TTATTGTTAGTGGTAAGGAT+AGG | + | chr7_2:82728922-82728941 | Msa1082620:CDS | 30.0% | |
| TTTCATGATTGTAGCTTGAT+AGG | + | chr7_2:82729288-82729307 | Msa1082620:intron | 30.0% | |
| !!! | TGTAGCTTGATAGGTTTTTT+TGG | + | chr7_2:82729297-82729316 | Msa1082620:intron | 30.0% |
| !!! | GTAGCTTGATAGGTTTTTTT+GGG | + | chr7_2:82729298-82729317 | Msa1082620:intron | 30.0% |
| ! | AGAGTATTTACTGAAAGGAT+TGG | + | chr7_2:82729428-82729447 | Msa1082620:intron | 30.0% |
| ! | TATGTTAAAGCACTTGAATC+AGG | - | chr7_2:82729565-82729584 | None:intergenic | 30.0% |
| ! | TAATGGACAAAGTCATAACA+TGG | + | chr7_2:82729690-82729709 | Msa1082620:CDS | 30.0% |
| AATGGACAAAGTCATAACAT+GGG | + | chr7_2:82729691-82729710 | Msa1082620:CDS | 30.0% | |
| !! | ATTCTTCTAGAGTATGAAGT+GGG | - | chr7_2:82729795-82729814 | None:intergenic | 30.0% |
| !! | AATTCTTCTAGAGTATGAAG+TGG | - | chr7_2:82729796-82729815 | None:intergenic | 30.0% |
| AGAGTTAGAGTATAAAAAGG+AGG | + | chr7_2:82729816-82729835 | Msa1082620:CDS | 30.0% | |
| !! | TCTTTTTAGGCATTAAGTCA+AGG | + | chr7_2:82730010-82730029 | Msa1082620:intron | 30.0% |
| GACAAAAGAAAATCAGCATA+GGG | - | chr7_2:82730059-82730078 | None:intergenic | 30.0% | |
| TGACAAAAGAAAATCAGCAT+AGG | - | chr7_2:82730060-82730079 | None:intergenic | 30.0% | |
| !! | AAAATTTTGCGGACTATGAT+AGG | + | chr7_2:82730742-82730761 | Msa1082620:CDS | 30.0% |
| AATTCACCAAAATTACCATG+AGG | - | chr7_2:82730858-82730877 | None:intergenic | 30.0% | |
| !! | GTAATTTTGGTGAATTTCAG+AGG | + | chr7_2:82730862-82730881 | Msa1082620:CDS | 30.0% |
| TGCTTTAGTAAAATGAGACA+AGG | - | chr7_2:82731046-82731065 | None:intergenic | 30.0% | |
| ! | TTCTGCTCGATAAAATTTTC+AGG | + | chr7_2:82731295-82731314 | Msa1082620:intron | 30.0% |
| ! | TCTGCTCGATAAAATTTTCA+GGG | + | chr7_2:82731296-82731315 | Msa1082620:intron | 30.0% |
| AACATACTTACCTACCTTAT+GGG | - | chr7_2:82731358-82731377 | None:intergenic | 30.0% | |
| ATTAATCTTAGGATTGGGAA+GGG | + | chr7_2:82731379-82731398 | Msa1082620:three_prime_UTR | 30.0% | |
| AATATCATTGAACAAGTCAC+CGG | - | chr7_2:82731507-82731526 | None:intergenic | 30.0% | |
| ! | GACTTGTTCAATGATATTTG+TGG | + | chr7_2:82731509-82731528 | Msa1082620:three_prime_UTR | 30.0% |
| AAAATCAACCAGTCATTCAT+AGG | - | chr7_2:82731539-82731558 | None:intergenic | 30.0% | |
| ! | ACGGAAAGAATTTTCATCCA+TGG | + | chr7_2:82727306-82727325 | Msa1082620:exon | 35.0% |
| CTAAAATCGTCGTCAATATC+TGG | - | chr7_2:82727346-82727365 | None:intergenic | 35.0% | |
| AGAGAGCAAAATCGAACAAA+AGG | + | chr7_2:82727416-82727435 | Msa1082620:CDS | 35.0% | |
| AAACCAGTTGGAATAGCATT+AGG | - | chr7_2:82727487-82727506 | None:intergenic | 35.0% | |
| TTTGTATTACAGGCTCTGTT+TGG | + | chr7_2:82727646-82727665 | Msa1082620:intron | 35.0% | |
| ! | TCATTTTACTCAGGTATCAC+TGG | + | chr7_2:82727704-82727723 | Msa1082620:intron | 35.0% |
| !! | ATATCGACTTAGAGCATGTT+TGG | + | chr7_2:82727784-82727803 | Msa1082620:intron | 35.0% |
| TCTCACAAAACTTATGCTAC+TGG | - | chr7_2:82727830-82727849 | None:intergenic | 35.0% | |
| AAAGCCCTGTTTGGATAAAT+AGG | - | chr7_2:82728049-82728068 | None:intergenic | 35.0% | |
| AACTCAAATAAAGCCCTGTT+TGG | - | chr7_2:82728058-82728077 | None:intergenic | 35.0% | |
| ATACCTTGTGGGATAGATTA+AGG | + | chr7_2:82728501-82728520 | Msa1082620:intron | 35.0% | |
| TACCTTGTGGGATAGATTAA+GGG | + | chr7_2:82728502-82728521 | Msa1082620:intron | 35.0% | |
| TTAAGGGAATAGCTTATGAC+AGG | + | chr7_2:82728518-82728537 | Msa1082620:intron | 35.0% | |
| AGTAAGATTGAAAGGGACAT+TGG | + | chr7_2:82728870-82728889 | Msa1082620:CDS | 35.0% | |
| ! | CATTGGCTGCAAAATTAAGA+TGG | + | chr7_2:82728887-82728906 | Msa1082620:CDS | 35.0% |
| ! | TGGTAAGGATAGGTTAGTTA+TGG | + | chr7_2:82728932-82728951 | Msa1082620:CDS | 35.0% |
| ! | GATAGGTTAGTTATGGCTAA+AGG | + | chr7_2:82728939-82728958 | Msa1082620:CDS | 35.0% |
| TTTGCAAGAGATTCTCAACA+AGG | + | chr7_2:82729218-82729237 | Msa1082620:CDS | 35.0% | |
| AAGAGATTCTCAACAAGGTA+GGG | + | chr7_2:82729223-82729242 | Msa1082620:intron | 35.0% | |
| AATTACCAGCTTTCTAACGA+TGG | - | chr7_2:82729270-82729289 | None:intergenic | 35.0% | |
| TCAGTAAATACTCTTCAGGA+CGG | - | chr7_2:82729422-82729441 | None:intergenic | 35.0% | |
| CCTTTCAGTAAATACTCTTC+AGG | - | chr7_2:82729426-82729445 | None:intergenic | 35.0% | |
| !! | CCTGAAGAGTATTTACTGAA+AGG | + | chr7_2:82729423-82729442 | Msa1082620:intron | 35.0% |
| TATTCGCATACTGAAACCAT+TGG | - | chr7_2:82729456-82729475 | None:intergenic | 35.0% | |
| TCTTCATTTCGTGAAGCTTA+TGG | + | chr7_2:82729586-82729605 | Msa1082620:CDS | 35.0% | |
| !! | TTCTTCTAGAGTATGAAGTG+GGG | - | chr7_2:82729794-82729813 | None:intergenic | 35.0% |
| AGAGTATAAAAAGGAGGCAA+TGG | + | chr7_2:82729822-82729841 | Msa1082620:CDS | 35.0% | |
| GACTTAATGCCTAAAAAGAC+AGG | - | chr7_2:82730009-82730028 | None:intergenic | 35.0% | |
| TGTAACAGTGAAATGCTCTT+GGG | - | chr7_2:82730257-82730276 | None:intergenic | 35.0% | |
| TTGTAACAGTGAAATGCTCT+TGG | - | chr7_2:82730258-82730277 | None:intergenic | 35.0% | |
| TCAACTAGGTCATCTATTGA+GGG | - | chr7_2:82730295-82730314 | None:intergenic | 35.0% | |
| ! | ATATGCATTGGTATGTGTGT+CGG | - | chr7_2:82730320-82730339 | None:intergenic | 35.0% |
| TCAAACAGGTCATCTATTGA+GGG | + | chr7_2:82730507-82730526 | Msa1082620:intron | 35.0% | |
| TTCCACGCATACAAAACAAT+GGG | + | chr7_2:82730635-82730654 | Msa1082620:CDS | 35.0% | |
| !!! | AATTTTGCTGTTTATAGCCC+CGG | - | chr7_2:82730728-82730747 | None:intergenic | 35.0% |
| GGTAAATTGTTTCCACCATA+GGG | - | chr7_2:82730783-82730802 | None:intergenic | 35.0% | |
| AGGTAAATTGTTTCCACCAT+AGG | - | chr7_2:82730784-82730803 | None:intergenic | 35.0% | |
| TGGTGGAAACAATTTACCTT+TGG | + | chr7_2:82730785-82730804 | Msa1082620:CDS | 35.0% | |
| !! | ACAATTTACCTTTGGAGTCA+CGG | + | chr7_2:82730793-82730812 | Msa1082620:CDS | 35.0% |
| GAATAGGTTCTCAAACAGTA+TGG | + | chr7_2:82730815-82730834 | Msa1082620:CDS | 35.0% | |
| ATTCATTTAGTAGCCGATAC+TGG | + | chr7_2:82731118-82731137 | Msa1082620:intron | 35.0% | |
| GTTGATGTTGTCACATAGAA+AGG | + | chr7_2:82731166-82731185 | Msa1082620:intron | 35.0% | |
| TTGTACTATAGTTGACCAAC+AGG | + | chr7_2:82731208-82731227 | Msa1082620:intron | 35.0% | |
| TGTACTATAGTTGACCAACA+GGG | + | chr7_2:82731209-82731228 | Msa1082620:intron | 35.0% | |
| ATCGAGCAGAATTAAAGCTA+TGG | - | chr7_2:82731286-82731305 | None:intergenic | 35.0% | |
| TAAATGAACAAGAGCCCATA+AGG | + | chr7_2:82731341-82731360 | Msa1082620:three_prime_UTR | 35.0% | |
| CAACATACTTACCTACCTTA+TGG | - | chr7_2:82731359-82731378 | None:intergenic | 35.0% | |
| GATTAATCTTAGGATTGGGA+AGG | + | chr7_2:82731378-82731397 | Msa1082620:three_prime_UTR | 35.0% | |
| CATTGTTTACCATCCATTAC+CGG | + | chr7_2:82731485-82731504 | Msa1082620:three_prime_UTR | 35.0% | |
| ! | TGCTTTGTTACAATCAATCC+AGG | + | chr7_2:82731575-82731594 | Msa1082620:three_prime_UTR | 35.0% |
| AAATCCACAAGAACACACAT+GGG | - | chr7_2:82731613-82731632 | None:intergenic | 35.0% | |
| AAAATCCACAAGAACACACA+TGG | - | chr7_2:82731614-82731633 | None:intergenic | 35.0% | |
| !!! | CTTGTGGATTTTTTACGCAT+AGG | + | chr7_2:82731622-82731641 | Msa1082620:three_prime_UTR | 35.0% |
| TGCATAGACAGAAATGTTAC+TGG | - | chr7_2:82731655-82731674 | None:intergenic | 35.0% | |
| ! | GCGATTACACGTCAGTTTTA+GGG | - | chr7_2:82727200-82727219 | None:intergenic | 40.0% |
| ! | AGCGATTACACGTCAGTTTT+AGG | - | chr7_2:82727201-82727220 | None:intergenic | 40.0% |
| AACAAGCGAAGGGATAGAAA+TGG | - | chr7_2:82727251-82727270 | None:intergenic | 40.0% | |
| ATGTAAGTGGAACAAGCGAA+GGG | - | chr7_2:82727261-82727280 | None:intergenic | 40.0% | |
| TATGTAAGTGGAACAAGCGA+AGG | - | chr7_2:82727262-82727281 | None:intergenic | 40.0% | |
| ATCGTCGTCAATATCTGGAT+CGG | - | chr7_2:82727341-82727360 | None:intergenic | 40.0% | |
| ! | GACCTATACAAAGAGTACAC+TGG | + | chr7_2:82727367-82727386 | Msa1082620:CDS | 40.0% |
| GACCAGTGTACTCTTTGTAT+AGG | - | chr7_2:82727372-82727391 | None:intergenic | 40.0% | |
| TCGAACAAAAGGTCAAATGC+AGG | + | chr7_2:82727427-82727446 | Msa1082620:CDS | 40.0% | |
| GATCCTAATGCTATTCCAAC+TGG | + | chr7_2:82727481-82727500 | Msa1082620:CDS | 40.0% | |
| TTTCATAAGCCGTGATGCTA+AGG | + | chr7_2:82727504-82727523 | Msa1082620:CDS | 40.0% | |
| CCAATTTCTCTCAGTAGCTT+TGG | - | chr7_2:82727545-82727564 | None:intergenic | 40.0% | |
| CCAAAGCTACTGAGAGAAAT+TGG | + | chr7_2:82727542-82727561 | Msa1082620:CDS | 40.0% | |
| TGAATCTGGACATTTCACTC+AGG | + | chr7_2:82727606-82727625 | Msa1082620:CDS | 40.0% | |
| !!! | TACTCAGGTATCACTGGTTT+TGG | + | chr7_2:82727710-82727729 | Msa1082620:intron | 40.0% |
| GACTTAGAGCATGTTTGGAT+TGG | + | chr7_2:82727789-82727808 | Msa1082620:intron | 40.0% | |
| !! | ACACCTTTTGGGAGATCTTA+CGG | + | chr7_2:82728103-82728122 | Msa1082620:intron | 40.0% |
| TTTCCGTAAGATCTCCCAAA+AGG | - | chr7_2:82728109-82728128 | None:intergenic | 40.0% | |
| TTTCATCGCCATCTTAGTTG+AGG | + | chr7_2:82728315-82728334 | Msa1082620:intron | 40.0% | |
| TTCATCGCCATCTTAGTTGA+GGG | + | chr7_2:82728316-82728335 | Msa1082620:intron | 40.0% | |
| ACGATATCCCTCAACTAAGA+TGG | - | chr7_2:82728326-82728345 | None:intergenic | 40.0% | |
| AATATTGCAAGTGCCCTGAA+TGG | - | chr7_2:82728422-82728441 | None:intergenic | 40.0% | |
| TAAGCGCTTGTAATACCTTG+TGG | + | chr7_2:82728489-82728508 | Msa1082620:intron | 40.0% | |
| AAGCGCTTGTAATACCTTGT+GGG | + | chr7_2:82728490-82728509 | Msa1082620:intron | 40.0% | |
| TTCCCTTAATCTATCCCACA+AGG | - | chr7_2:82728507-82728526 | None:intergenic | 40.0% | |
| TTGTTTGCTCCAAGAGTAGA+TGG | - | chr7_2:82728774-82728793 | None:intergenic | 40.0% | |
| CTTACATTTCTGTCTCTTGC+AGG | - | chr7_2:82728825-82728844 | None:intergenic | 40.0% | |
| TGCTGTGCATAAGATTAGAG+AGG | + | chr7_2:82728968-82728987 | Msa1082620:CDS | 40.0% | |
| GTGCATAAGATTAGAGAGGA+AGG | + | chr7_2:82728972-82728991 | Msa1082620:CDS | 40.0% | |
| TAGAGAGGAAGGTGAACAAA+AGG | + | chr7_2:82728983-82729002 | Msa1082620:CDS | 40.0% | |
| AGAGAGGAAGGTGAACAAAA+GGG | + | chr7_2:82728984-82729003 | Msa1082620:CDS | 40.0% | |
| TGATCGGTTAATCTGAGAAC+TGG | - | chr7_2:82729015-82729034 | None:intergenic | 40.0% | |
| GTTCTCAGATTAACCGATCA+AGG | + | chr7_2:82729015-82729034 | Msa1082620:CDS | 40.0% | |
| GAATTAACAGGACTTCTCTG+AGG | - | chr7_2:82729074-82729093 | None:intergenic | 40.0% | |
| AGAGAAGTCCTGTTAATTCC+AGG | + | chr7_2:82729075-82729094 | Msa1082620:CDS | 40.0% | |
| ATACACCTCAGTTTCCTCAA+AGG | + | chr7_2:82729141-82729160 | Msa1082620:CDS | 40.0% | |
| CAAGAGATTCTCAACAAGGT+AGG | + | chr7_2:82729222-82729241 | Msa1082620:intron | 40.0% | |
| TTATGCCATCGTTAGAAAGC+TGG | + | chr7_2:82729262-82729281 | Msa1082620:intron | 40.0% | |
| ! | TGTCATTTACTTGCAGCAAG+AGG | + | chr7_2:82729369-82729388 | Msa1082620:intron | 40.0% |
| AGGACGGAGATAATTGTTGA+AGG | - | chr7_2:82729406-82729425 | None:intergenic | 40.0% | |
| TATGGCAATAGTGCATCTAG+AGG | + | chr7_2:82729604-82729623 | Msa1082620:CDS | 40.0% | |
| !!! | GAGATTTTGACTGGCTTGAA+CGG | - | chr7_2:82729630-82729649 | None:intergenic | 40.0% |
| !! | CTTGTCTTGGAGATTTTGAC+TGG | - | chr7_2:82729639-82729658 | None:intergenic | 40.0% |
| ATAAGAGTTCCCTGTATGTG+AGG | - | chr7_2:82729662-82729681 | None:intergenic | 40.0% | |
| GTCATAACATGGGCACTTAT+AGG | + | chr7_2:82729701-82729720 | Msa1082620:CDS | 40.0% | |
| ATGGGCACTTATAGGAATGA+CGG | + | chr7_2:82729709-82729728 | Msa1082620:CDS | 40.0% | |
| GATTCTCATAGGAGAGAATC+TGG | + | chr7_2:82729736-82729755 | Msa1082620:CDS | 40.0% | |
| ! | TCCTCTGTTTTACTGTGACT+TGG | + | chr7_2:82730139-82730158 | Msa1082620:intron | 40.0% |
| GTCAACTAGGTCATCTATTG+AGG | - | chr7_2:82730296-82730315 | None:intergenic | 40.0% | |
| GTCAAACAGGTCATCTATTG+AGG | + | chr7_2:82730506-82730525 | Msa1082620:intron | 40.0% | |
| GTTCCACGCATACAAAACAA+TGG | + | chr7_2:82730634-82730653 | Msa1082620:CDS | 40.0% | |
| !! | TTCCCATTGTTTTGTATGCG+TGG | - | chr7_2:82730640-82730659 | None:intergenic | 40.0% |
| AACAAATGTCTCCTGGATAC+CGG | + | chr7_2:82730706-82730725 | Msa1082620:CDS | 40.0% | |
| AAATTGTTTCCACCATAGGG+AGG | - | chr7_2:82730780-82730799 | None:intergenic | 40.0% | |
| ! | AAATTACCATGAGGCCTTGT+AGG | - | chr7_2:82730849-82730868 | None:intergenic | 40.0% |
| ! | ACAAGGCCTCATGGTAATTT+TGG | + | chr7_2:82730849-82730868 | Msa1082620:CDS | 40.0% |
| ATTAGTAGGTTTGGAAGACG+AGG | - | chr7_2:82730959-82730978 | None:intergenic | 40.0% | |
| GAAATAACAACCCAACCTTG+AGG | - | chr7_2:82731093-82731112 | None:intergenic | 40.0% | |
| ACAAACTACAATGTCCCTGT+TGG | - | chr7_2:82731226-82731245 | None:intergenic | 40.0% | |
| TAACACCTACTCGATCAATC+TGG | - | chr7_2:82731323-82731342 | None:intergenic | 40.0% | |
| ATTGAACAAGTCACCGGTAA+TGG | - | chr7_2:82731501-82731520 | None:intergenic | 40.0% | |
| ACAATCAATCCAGGTGTTTG+AGG | + | chr7_2:82731584-82731603 | Msa1082620:three_prime_UTR | 40.0% | |
| AAGGGATAGAAATGGTGTGG+TGG | - | chr7_2:82727243-82727262 | None:intergenic | 45.0% | |
| TCGTCGTCAATATCTGGATC+GGG | - | chr7_2:82727340-82727359 | None:intergenic | 45.0% | |
| ! | AAAGAGTACACTGGTCCTGT+AGG | + | chr7_2:82727376-82727395 | Msa1082620:CDS | 45.0% |
| TGCTCTCTCTTGAACAGATC+CGG | - | chr7_2:82727404-82727423 | None:intergenic | 45.0% | |
| TCACGGCTTATGAAACCAGT+TGG | - | chr7_2:82727499-82727518 | None:intergenic | 45.0% | |
| ! | ATGCACTCTGTCACACCTTT+TGG | + | chr7_2:82728091-82728110 | Msa1082620:intron | 45.0% |
| ! | TGCACTCTGTCACACCTTTT+GGG | + | chr7_2:82728092-82728111 | Msa1082620:intron | 45.0% |
| TAGGGTTGTCCATCTACTCT+TGG | + | chr7_2:82728762-82728781 | Msa1082620:intron | 45.0% | |
| ! | TTAACAGGACTTCTCTGAGG+TGG | - | chr7_2:82729071-82729090 | None:intergenic | 45.0% |
| CGCTGAAACCTGGAATTAAC+AGG | - | chr7_2:82729086-82729105 | None:intergenic | 45.0% | |
| AGAGATCTCATTCTGCACCA+CGG | + | chr7_2:82729117-82729136 | Msa1082620:CDS | 45.0% | |
| ! | CCAAACCTTTGAGGAAACTG+AGG | - | chr7_2:82729149-82729168 | None:intergenic | 45.0% |
| CCTCAGTTTCCTCAAAGGTT+TGG | + | chr7_2:82729146-82729165 | Msa1082620:CDS | 45.0% | |
| AGTTTCCTCAAAGGTTTGGC+AGG | + | chr7_2:82729150-82729169 | Msa1082620:CDS | 45.0% | |
| !! | ACTGAAAGGATTGGCTCCAA+TGG | + | chr7_2:82729437-82729456 | Msa1082620:intron | 45.0% |
| CAAGACAAGCCTCACATACA+GGG | + | chr7_2:82729650-82729669 | Msa1082620:CDS | 45.0% | |
| TGGGCACTTATAGGAATGAC+GGG | + | chr7_2:82729710-82729729 | Msa1082620:CDS | 45.0% | |
| !! | CACTTATAGGAATGACGGGT+GGG | + | chr7_2:82729714-82729733 | Msa1082620:CDS | 45.0% |
| !! | TTGTGATCAAAGTGTTGGCC+AGG | - | chr7_2:82729769-82729788 | None:intergenic | 45.0% |
| ! | GGGCATTGTGATCAAAGTGT+TGG | - | chr7_2:82729774-82729793 | None:intergenic | 45.0% |
| GCCAAGTCACAGTAAAACAG+AGG | - | chr7_2:82730143-82730162 | None:intergenic | 45.0% | |
| CTAGGTCATCTATTGAGGGA+CGG | - | chr7_2:82730291-82730310 | None:intergenic | 45.0% | |
| TATGTGTGTCGGAGTCAACT+AGG | - | chr7_2:82730309-82730328 | None:intergenic | 45.0% | |
| GTCATCTATTGAGGGACGAA+GGG | + | chr7_2:82730515-82730534 | Msa1082620:intron | 45.0% | |
| !! | TTTTTCAGCTTGATGCCCAG+AGG | + | chr7_2:82730664-82730683 | Msa1082620:CDS | 45.0% |
| GCAATCCAACAAATGTCTCC+TGG | + | chr7_2:82730699-82730718 | Msa1082620:CDS | 45.0% | |
| GGTATCCAGGAGACATTTGT+TGG | - | chr7_2:82730707-82730726 | None:intergenic | 45.0% | |
| ACAAATGTCTCCTGGATACC+GGG | + | chr7_2:82730707-82730726 | Msa1082620:CDS | 45.0% | |
| !! | TACCTTTGGAGTCACGGAAT+AGG | + | chr7_2:82730799-82730818 | Msa1082620:CDS | 45.0% |
| AACCTATTCCGTGACTCCAA+AGG | - | chr7_2:82730804-82730823 | None:intergenic | 45.0% | |
| ! | GTATGGAGCCTTATCCTACA+AGG | + | chr7_2:82730832-82730851 | Msa1082620:CDS | 45.0% |
| TTTGGTGAATTTCAGAGGCG+TGG | + | chr7_2:82730867-82730886 | Msa1082620:CDS | 45.0% | |
| ! | AGATAACTTGCCTTGCCTCA+AGG | + | chr7_2:82731075-82731094 | Msa1082620:intron | 45.0% |
| TGAACAAGAGCCCATAAGGT+AGG | + | chr7_2:82731345-82731364 | Msa1082620:three_prime_UTR | 45.0% | |
| !! | AACAAGTCACCGGTAATGGA+TGG | - | chr7_2:82731497-82731516 | None:intergenic | 45.0% |
| GTGGAGATCCTATGAATGAC+TGG | + | chr7_2:82731528-82731547 | Msa1082620:three_prime_UTR | 45.0% | |
| !! | TTAAAAAATAAAAAATTAGT+AGG | - | chr7_2:82730973-82730992 | None:intergenic | 5.0% |
| GCGAAGGGATAGAAATGGTG+TGG | - | chr7_2:82727246-82727265 | None:intergenic | 50.0% | |
| ACTTCCATCGCCGATATCGA+CGG | + | chr7_2:82727287-82727306 | Msa1082620:five_prime_UTR | 50.0% | |
| TGGATCGGGAATATTCGCCA+TGG | - | chr7_2:82727326-82727345 | None:intergenic | 50.0% | |
| TACACTGGTCCTGTAGGATC+CGG | + | chr7_2:82727382-82727401 | Msa1082620:CDS | 50.0% | |
| TGAACAGATCCGGATCCTAC+AGG | - | chr7_2:82727394-82727413 | None:intergenic | 50.0% | |
| TAAGCCGTGATGCTAAGGTC+TGG | + | chr7_2:82727509-82727528 | Msa1082620:CDS | 50.0% | |
| AAGCCGTGATGCTAAGGTCT+GGG | + | chr7_2:82727510-82727529 | Msa1082620:CDS | 50.0% | |
| CTTCCCAGACCTTAGCATCA+CGG | - | chr7_2:82727516-82727535 | None:intergenic | 50.0% | |
| GGTGCAGAATGAGATCTCTG+AGG | - | chr7_2:82729116-82729135 | None:intergenic | 50.0% | |
| GGAAACTGAGGTGTATTCCG+TGG | - | chr7_2:82729137-82729156 | None:intergenic | 50.0% | |
| TCTTGCCTGCCAAACCTTTG+AGG | - | chr7_2:82729158-82729177 | None:intergenic | 50.0% | |
| ! | TTTGAGTGTCGTCGCGAACA+CGG | - | chr7_2:82729196-82729215 | None:intergenic | 50.0% |
| CAACAAGGTAGGGACAGCTT+AGG | + | chr7_2:82729233-82729252 | Msa1082620:intron | 50.0% | |
| CCTGTATGTGAGGCTTGTCT+TGG | - | chr7_2:82729652-82729671 | None:intergenic | 50.0% | |
| CCAAGACAAGCCTCACATAC+AGG | + | chr7_2:82729649-82729668 | Msa1082620:CDS | 50.0% | |
| ! | GCACTTATAGGAATGACGGG+TGG | + | chr7_2:82729713-82729732 | Msa1082620:CDS | 50.0% |
| !! | ATGACGGGTGGGATTCTCAT+AGG | + | chr7_2:82729725-82729744 | Msa1082620:CDS | 50.0% |
| AGAGAATCTGGCATCCAACC+TGG | + | chr7_2:82729748-82729767 | Msa1082620:CDS | 50.0% | |
| !! | GATCAAAGTGTTGGCCAGGT+TGG | - | chr7_2:82729765-82729784 | None:intergenic | 50.0% |
| ACATCGTGAGGTGCGTTCAT+TGG | + | chr7_2:82729891-82729910 | Msa1082620:intron | 50.0% | |
| GTCATCTATTGAGGGACGGA+GGG | - | chr7_2:82730287-82730306 | None:intergenic | 50.0% | |
| GGTCATCTATTGAGGGACGA+AGG | + | chr7_2:82730514-82730533 | Msa1082620:intron | 50.0% | |
| !! | TGCTTGTTGTTGACGCCTCT+GGG | - | chr7_2:82730682-82730701 | None:intergenic | 50.0% |
| !! | TTGCTTGTTGTTGACGCCTC+TGG | - | chr7_2:82730683-82730702 | None:intergenic | 50.0% |
| CAAATGTCTCCTGGATACCG+GGG | + | chr7_2:82730708-82730727 | Msa1082620:CDS | 50.0% | |
| TGTTTATAGCCCCGGTATCC+AGG | - | chr7_2:82730720-82730739 | None:intergenic | 50.0% | |
| TCTCCTGTCAATCCTCCCTA+TGG | + | chr7_2:82730765-82730784 | Msa1082620:CDS | 50.0% | |
| ! | CCATGAGGCCTTGTAGGATA+AGG | - | chr7_2:82730843-82730862 | None:intergenic | 50.0% |
| CCTTATCCTACAAGGCCTCA+TGG | + | chr7_2:82730840-82730859 | Msa1082620:CDS | 50.0% | |
| GTAGGTTTGGAAGACGAGGT+CGG | - | chr7_2:82730955-82730974 | None:intergenic | 50.0% | |
| AACTTGCCTTGCCTCAAGGT+TGG | + | chr7_2:82731079-82731098 | Msa1082620:intron | 50.0% | |
| ACTTGCCTTGCCTCAAGGTT+GGG | + | chr7_2:82731080-82731099 | Msa1082620:intron | 50.0% | |
| AACAACCCAACCTTGAGGCA+AGG | - | chr7_2:82731088-82731107 | None:intergenic | 50.0% | |
| AGGGTCCAGATTGATCGAGT+AGG | + | chr7_2:82731315-82731334 | Msa1082620:intron | 50.0% | |
| TTGGGAAGGGACATGCATTC+TGG | + | chr7_2:82731392-82731411 | Msa1082620:three_prime_UTR | 50.0% | |
| GCATCCCATGTGTGTTCTTG+TGG | + | chr7_2:82731606-82731625 | Msa1082620:three_prime_UTR | 50.0% | |
| CTTTCCGTCGATATCGGCGA+TGG | - | chr7_2:82727294-82727313 | None:intergenic | 55.0% | |
| ! | GAGGTGGTGGTGACCTTGAT+CGG | - | chr7_2:82729031-82729050 | None:intergenic | 55.0% |
| ! | GAGGTGGTGGTGACCTTGAT+CGG | - | chr7_2:82729031-82729050 | None:intergenic | 55.0% |
| !! | ACAGGACTTCTCTGAGGTGG+TGG | - | chr7_2:82729068-82729087 | None:intergenic | 55.0% |
| GGTCATCTATTGAGGGACGG+AGG | - | chr7_2:82730288-82730307 | None:intergenic | 55.0% | |
| CCACCATAGGGAGGATTGAC+AGG | - | chr7_2:82730771-82730790 | None:intergenic | 55.0% | |
| CCTGTCAATCCTCCCTATGG+TGG | + | chr7_2:82730768-82730787 | Msa1082620:CDS | 55.0% | |
| TACGGCTCGACGACCAGTAT+CGG | - | chr7_2:82731134-82731153 | None:intergenic | 55.0% | |
| CATGGGATGCCTCAAACACC+TGG | - | chr7_2:82731596-82731615 | None:intergenic | 55.0% | |
| CACCACCACCTCACCGATCA+AGG | + | chr7_2:82729039-82729058 | Msa1082620:CDS | 60.0% | |
| GACCTTGATCGGTGAGGTGG+TGG | - | chr7_2:82729044-82729063 | None:intergenic | 60.0% | |
| GGTGACCTTGATCGGTGAGG+TGG | - | chr7_2:82729047-82729066 | None:intergenic | 60.0% | |
| GGTGGTGACCTTGATCGGTG+AGG | - | chr7_2:82729050-82729069 | None:intergenic | 60.0% | |
| !! | AGGCTCAGAGCGCTGAAACC+TGG | - | chr7_2:82729096-82729115 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 82727190 | 82731698 | 82727190 | ID=Msa1082620;Name=Msa1082620 |
| chr7_2 | mRNA | 82727190 | 82731698 | 82727190 | ID=Msa1082620-mRNA-1;Parent=Msa1082620;Name=Msa1082620-mRNA-1;_AED=0.19;_eAED=0.19;_QI=135|0.8|0.5|1|0.8|0.66|6|400|495 |
| chr7_2 | exon | 82727190 | 82727627 | 82727190 | ID=Msa1082620-mRNA-1:exon:21521;Parent=Msa1082620-mRNA-1 |
| chr7_2 | exon | 82728765 | 82729239 | 82728765 | ID=Msa1082620-mRNA-1:exon:21522;Parent=Msa1082620-mRNA-1 |
| chr7_2 | exon | 82729385 | 82729430 | 82729385 | ID=Msa1082620-mRNA-1:exon:21523;Parent=Msa1082620-mRNA-1 |
| chr7_2 | exon | 82729573 | 82729900 | 82729573 | ID=Msa1082620-mRNA-1:exon:21524;Parent=Msa1082620-mRNA-1 |
| chr7_2 | exon | 82730585 | 82730938 | 82730585 | ID=Msa1082620-mRNA-1:exon:21525;Parent=Msa1082620-mRNA-1 |
| chr7_2 | exon | 82731317 | 82731698 | 82731317 | ID=Msa1082620-mRNA-1:exon:21526;Parent=Msa1082620-mRNA-1 |
| chr7_2 | five_prime_UTR | 82727190 | 82727324 | 82727190 | ID=Msa1082620-mRNA-1:five_prime_utr;Parent=Msa1082620-mRNA-1 |
| chr7_2 | CDS | 82727325 | 82727627 | 82727325 | ID=Msa1082620-mRNA-1:cds;Parent=Msa1082620-mRNA-1 |
| chr7_2 | CDS | 82728765 | 82729239 | 82728765 | ID=Msa1082620-mRNA-1:cds;Parent=Msa1082620-mRNA-1 |
| chr7_2 | CDS | 82729385 | 82729430 | 82729385 | ID=Msa1082620-mRNA-1:cds;Parent=Msa1082620-mRNA-1 |
| chr7_2 | CDS | 82729573 | 82729900 | 82729573 | ID=Msa1082620-mRNA-1:cds;Parent=Msa1082620-mRNA-1 |
| chr7_2 | CDS | 82730585 | 82730920 | 82730585 | ID=Msa1082620-mRNA-1:cds;Parent=Msa1082620-mRNA-1 |
| chr7_2 | three_prime_UTR | 82730921 | 82730938 | 82730921 | ID=Msa1082620-mRNA-1:three_prime_utr;Parent=Msa1082620-mRNA-1 |
| chr7_2 | three_prime_UTR | 82731317 | 82731698 | 82731317 | ID=Msa1082620-mRNA-1:three_prime_utr;Parent=Msa1082620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
