AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1129630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129630 MtrunA17_Chr7g0274471 92.026 464 12 2 1 462 1 441 0.0 860
Msa1129630 MtrunA17_Chr1g0190301 51.748 429 130 10 47 460 19 385 6.26e-126 371
Msa1129630 MtrunA17_Chr7g0261911 41.591 440 200 10 1 411 26 437 4.73e-89 280
Msa1129630 MtrunA17_Chr1g0175091 46.305 203 72 6 200 398 244 413 7.48e-45 162
Msa1129630 MtrunA17_Chr7g0258551 45.783 166 66 2 215 380 211 352 1.41e-42 155
Msa1129630 MtrunA17_Chr2g0291021 47.674 172 65 2 216 385 49 197 4.15e-42 152
Msa1129630 MtrunA17_Chr7g0254981 39.801 201 88 3 182 372 9 186 1.08e-40 147
Msa1129630 MtrunA17_Chr6g0461641 45.714 175 56 4 212 370 38 189 4.84e-36 137
Msa1129630 MtrunA17_Chr5g0417521 33.488 215 96 5 212 404 11 200 3.64e-30 120
Msa1129630 MtrunA17_Chr8g0356501 34.574 188 89 4 202 381 23 184 1.24e-29 118
Msa1129630 MtrunA17_Chr2g0321461 37.912 182 69 4 212 372 41 199 3.09e-29 118
Msa1129630 MtrunA17_Chr5g0409731 42.683 164 59 4 216 367 25 165 4.11e-29 115
Msa1129630 MtrunA17_Chr4g0042451 34.562 217 92 6 212 404 13 203 2.15e-28 115
Msa1129630 MtrunA17_Chr2g0310011 35.714 168 76 3 201 362 20 161 8.04e-27 110
Msa1129630 MtrunA17_Chr1g0175071 36.612 183 88 6 190 371 153 308 1.55e-25 106
Msa1129630 MtrunA17_Chr2g0290991 45.000 120 54 2 216 323 39 158 2.65e-24 102
Msa1129630 MtrunA17_Chr1g0197171 32.934 167 80 2 216 373 44 187 5.74e-24 101
Msa1129630 MtrunA17_Chr1g0175081 55.405 74 31 1 203 276 11 82 4.38e-23 93.6
Msa1129630 MtrunA17_Chr7g0242521 37.662 154 59 4 216 361 13 137 1.13e-22 96.7
Msa1129630 MtrunA17_Chr1g0162931 67.857 56 18 0 217 272 19 74 2.18e-19 88.2
Msa1129630 MtrunA17_Chr7g0258531 35.519 183 78 6 188 364 191 339 2.61e-19 89.4
Msa1129630 MtrunA17_Chr2g0288601 63.793 58 21 0 217 274 72 129 3.14e-19 83.6
Msa1129630 MtrunA17_Chr1g0210911 66.071 56 19 0 217 272 23 78 6.15e-19 87.8
Msa1129630 MtrunA17_Chr3g0095611 38.760 129 73 3 216 340 19 145 1.85e-18 84.0
Msa1129630 MtrunA17_Chr2g0320231 60.294 68 26 1 217 284 98 164 2.30e-18 86.7
Msa1129630 MtrunA17_Chr8g0379121 53.247 77 32 1 217 289 112 188 3.62e-18 86.7
Msa1129630 MtrunA17_Chr7g0243081 62.500 56 21 0 217 272 72 127 3.96e-18 85.5
Msa1129630 MtrunA17_Chr6g0479431 56.164 73 30 1 217 287 203 275 1.94e-17 83.6
Msa1129630 MtrunA17_Chr1g0154261 62.295 61 23 0 217 277 127 187 2.16e-17 82.4
Msa1129630 MtrunA17_Chr8g0366281 51.948 77 37 0 210 286 167 243 4.00e-17 82.8
Msa1129630 MtrunA17_Chr5g0410741 61.667 60 23 0 213 272 216 275 1.98e-16 80.9
Msa1129630 MtrunA17_Chr3g0109981 61.667 60 23 0 213 272 271 330 3.61e-16 80.5
Msa1129630 MtrunA17_Chr2g0283951 68.000 50 16 0 217 266 90 139 1.46e-15 78.2
Msa1129630 MtrunA17_Chr2g0304841 54.930 71 30 2 212 282 209 277 2.31e-15 78.6
Msa1129630 MtrunA17_Chr7g0275401 66.667 54 17 1 216 269 192 244 3.47e-15 75.9
Msa1129630 MtrunA17_Chr4g0067981 46.739 92 40 2 216 299 215 305 2.92e-14 75.1
Msa1129630 MtrunA17_Chr3g0137101 60.345 58 22 1 212 269 194 250 1.73e-13 72.8
Msa1129630 MtrunA17_Chr4g0009901 53.030 66 28 2 216 281 168 230 1.75e-13 70.5
Msa1129630 MtrunA17_Chr1g0198601 54.839 62 28 0 216 277 211 272 2.12e-13 71.6
Msa1129630 MtrunA17_Chr4g0045361 62.963 54 20 0 216 269 274 327 2.42e-13 71.6
Msa1129630 MtrunA17_Chr4g0009981 50.649 77 34 3 205 281 106 178 4.35e-13 69.3
Msa1129630 MtrunA17_Chr4g0062921 53.030 66 31 0 210 275 229 294 5.23e-13 70.9
Msa1129630 MtrunA17_Chr1g0149841 62.069 58 21 1 212 269 187 243 6.24e-13 70.9
Msa1129630 MtrunA17_Chr4g0031961 51.562 64 30 1 206 269 121 183 1.04e-12 68.9
Msa1129630 MtrunA17_Chr1g0161431 62.963 54 19 1 216 269 200 252 1.14e-12 70.1
Msa1129630 MtrunA17_Chr4g0074401 51.562 64 30 1 212 275 199 261 1.28e-12 70.1
Msa1129630 MtrunA17_Chr1g0149831 57.627 59 21 1 211 269 123 177 1.59e-12 67.0
Msa1129630 MtrunA17_Chr5g0422621 58.929 56 23 0 214 269 196 251 1.71e-12 68.6
Msa1129630 MtrunA17_Chr4g0074411 53.125 64 29 1 212 275 197 259 2.00e-12 69.3
Msa1129630 MtrunA17_Chr4g0074421 55.357 56 24 1 211 266 128 182 4.10e-12 65.1
Msa1129630 MtrunA17_Chr5g0402631 57.895 57 24 0 213 269 211 267 4.58e-12 67.4
Msa1129630 MtrunA17_Chr2g0294911 55.172 58 25 1 212 269 207 263 1.03e-11 67.0
Msa1129630 MtrunA17_Chr4g0054981 37.895 95 58 1 175 269 269 362 2.14e-11 65.9
Msa1129630 MtrunA17_Chr7g0255711 53.704 54 24 1 216 269 91 143 4.28e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129630 AT5G29000.2 43.176 403 169 10 3 383 14 378 3.70e-82 260
Msa1129630 AT5G29000.1 44.199 362 140 8 52 383 6 335 9.28e-79 249
Msa1129630 AT5G29000.3 44.199 362 140 8 52 383 6 335 9.28e-79 249
Msa1129630 AT3G04450.4 45.706 326 121 9 93 400 71 358 5.98e-74 238
Msa1129630 AT3G04450.2 45.706 326 121 9 93 400 71 358 5.98e-74 238
Msa1129630 AT3G04450.1 45.706 326 121 9 93 400 111 398 1.83e-73 238
Msa1129630 AT4G28610.1 48.364 275 106 11 106 368 105 355 4.24e-66 218
Msa1129630 AT5G29000.4 39.203 301 149 8 3 284 14 299 7.72e-47 164
Msa1129630 AT2G20400.1 37.151 358 155 11 44 368 40 360 1.49e-46 166
Msa1129630 AT2G20400.2 37.326 359 154 12 44 368 40 361 2.13e-45 163
Msa1129630 AT3G04450.3 45.320 203 89 5 93 282 111 304 3.95e-44 157
Msa1129630 AT2G01060.1 43.564 202 85 3 215 415 14 187 1.75e-43 155
Msa1129630 AT3G13040.3 45.205 219 80 4 208 409 233 428 1.91e-41 153
Msa1129630 AT3G13040.1 45.205 219 80 4 208 409 233 428 1.91e-41 153
Msa1129630 AT3G13040.2 45.205 219 80 4 208 409 233 428 1.91e-41 153
Msa1129630 AT5G06800.1 43.455 191 79 3 185 370 156 322 8.35e-41 150
Msa1129630 AT5G06800.2 42.564 195 80 3 185 370 156 327 6.28e-40 148
Msa1129630 AT3G24120.2 40.206 194 84 5 204 385 29 202 8.55e-36 134
Msa1129630 AT4G13640.2 44.848 165 57 4 216 367 37 180 4.91e-35 132
Msa1129630 AT3G24120.1 39.691 194 82 4 204 385 29 199 6.20e-35 132
Msa1129630 AT4G13640.1 44.848 165 54 4 216 367 37 177 1.93e-34 130
Msa1129630 AT1G69580.1 38.798 183 72 2 205 370 23 182 8.21e-32 124
Msa1129630 AT3G04030.3 35.678 199 90 3 204 387 33 208 1.66e-31 125
Msa1129630 AT1G69580.2 38.919 185 70 4 205 370 23 183 2.38e-30 120
Msa1129630 AT5G18240.1 40.331 181 61 5 212 372 41 194 4.81e-30 121
Msa1129630 AT5G18240.4 40.331 181 61 5 212 372 41 194 4.81e-30 121
Msa1129630 AT1G79430.2 38.636 176 76 4 201 370 19 168 1.46e-29 119
Msa1129630 AT5G45580.2 31.395 258 122 4 216 455 23 243 2.41e-29 116
Msa1129630 AT5G45580.1 31.395 258 122 4 216 455 7 227 2.51e-29 116
Msa1129630 AT3G04030.2 34.673 199 91 4 204 387 33 207 1.19e-28 117
Msa1129630 AT5G18240.5 39.227 181 61 5 212 372 41 192 1.40e-28 117
Msa1129630 AT3G04030.1 33.166 199 89 3 204 387 33 202 2.08e-27 113
Msa1129630 AT5G18240.2 37.569 181 60 5 212 372 41 188 5.38e-26 109
Msa1129630 AT5G18240.3 37.569 181 60 5 212 372 41 188 5.38e-26 109
Msa1129630 AT2G01060.2 39.157 166 72 3 251 415 1 138 2.47e-25 104
Msa1129630 AT3G12730.1 35.000 160 73 2 216 367 23 159 3.89e-24 100
Msa1129630 AT5G06800.3 49.020 102 47 1 185 281 156 257 1.19e-23 100
Msa1129630 AT4G04605.1 56.522 69 30 0 217 285 15 83 3.83e-19 86.3
Msa1129630 AT1G14600.1 67.857 56 18 0 217 272 24 79 6.77e-19 86.7
Msa1129630 AT2G42660.1 59.016 61 25 0 217 277 51 111 9.11e-19 86.3
Msa1129630 AT2G40260.1 54.321 81 34 2 200 280 67 144 9.43e-18 85.5
Msa1129630 AT5G42630.2 66.071 56 19 0 217 272 106 161 1.07e-17 82.4
Msa1129630 AT5G42630.1 66.071 56 19 0 217 272 106 161 2.20e-17 82.4
Msa1129630 AT2G02060.2 63.636 55 20 0 217 271 30 84 2.84e-17 82.0
Msa1129630 AT2G02060.1 63.636 55 20 0 217 271 30 84 2.84e-17 82.0
Msa1129630 AT2G38300.1 60.714 56 22 0 217 272 55 110 5.54e-17 82.4
Msa1129630 AT4G17695.1 64.286 56 20 0 217 272 165 220 1.64e-16 80.9
Msa1129630 AT1G32240.2 61.667 60 23 0 213 272 210 269 1.82e-16 81.3
Msa1129630 AT1G32240.1 61.667 60 23 0 213 272 210 269 2.42e-16 80.9
Msa1129630 AT5G16560.1 61.667 60 23 0 213 272 216 275 2.55e-16 81.3
Msa1129630 AT2G06020.1 55.738 61 27 0 212 272 82 142 5.40e-16 79.0
Msa1129630 AT4G04580.1 38.776 98 58 1 217 312 15 112 1.23e-15 75.1
Msa1129630 AT1G25550.1 56.061 66 29 0 213 278 206 271 7.81e-15 75.9
Msa1129630 AT2G03500.1 50.000 76 38 0 207 282 224 299 3.68e-14 74.7
Msa1129630 AT3G16857.3 68.519 54 16 1 216 269 167 219 1.33e-13 73.6
Msa1129630 AT3G16857.1 68.519 54 16 1 216 269 237 289 1.40e-13 73.6
Msa1129630 AT3G16857.2 68.519 54 16 1 216 269 237 289 1.48e-13 73.6
Msa1129630 AT4G37180.1 47.500 80 41 1 203 281 197 276 1.74e-13 72.0
Msa1129630 AT4G37180.2 47.500 80 41 1 203 281 204 283 1.88e-13 72.0
Msa1129630 AT3G62670.1 51.389 72 31 1 216 283 211 282 3.49e-13 71.6
Msa1129630 AT5G58080.1 56.667 60 25 1 210 269 188 246 4.83e-13 71.6
Msa1129630 AT1G68670.1 56.667 60 26 0 216 275 215 274 1.04e-12 69.7
Msa1129630 AT1G79430.1 34.884 129 52 4 248 370 1 103 1.35e-12 68.6
Msa1129630 AT5G59570.2 52.459 61 28 1 209 269 134 193 1.37e-12 68.6
Msa1129630 AT5G59570.1 52.459 61 28 1 209 269 134 193 1.37e-12 68.6
Msa1129630 AT5G44190.1 54.237 59 26 1 214 272 145 202 1.92e-12 68.9
Msa1129630 AT5G44190.2 54.237 59 26 1 214 272 145 202 2.16e-12 68.6
Msa1129630 AT2G25180.1 59.322 59 23 1 211 269 190 247 2.17e-12 69.7
Msa1129630 AT3G04030.5 30.968 155 69 3 248 387 1 132 2.36e-12 68.2
Msa1129630 AT2G40970.1 42.667 75 42 1 195 269 84 157 5.24e-12 66.2
Msa1129630 AT4G31920.1 53.226 62 28 1 213 274 180 240 7.33e-12 67.8
Msa1129630 AT1G49560.1 55.385 65 29 0 216 280 192 256 7.77e-12 67.0
Msa1129630 AT2G20570.1 38.947 95 52 2 213 302 150 243 7.86e-12 67.4
Msa1129630 AT4G04555.1 49.180 61 30 1 217 277 15 74 8.02e-12 62.4
Msa1129630 AT3G46640.3 55.556 54 23 1 216 269 144 196 9.31e-12 66.6
Msa1129630 AT3G46640.2 55.556 54 23 1 216 269 144 196 1.09e-11 66.2
Msa1129630 AT3G46640.1 55.556 54 23 1 216 269 144 196 1.09e-11 66.2
Msa1129630 AT1G25550.2 59.259 54 22 0 213 266 206 259 1.31e-11 65.5
Msa1129630 AT2G20570.2 40.000 90 48 2 218 302 171 259 1.42e-11 66.6
Msa1129630 AT1G67710.3 53.968 63 29 0 218 280 121 183 1.54e-11 66.6
Msa1129630 AT5G05090.1 53.704 54 24 1 216 269 81 133 1.61e-11 65.1
Msa1129630 AT1G67710.2 53.968 63 29 0 218 280 130 192 1.86e-11 66.2
Msa1129630 AT1G67710.1 53.968 63 29 0 218 280 195 257 1.94e-11 66.6
Msa1129630 AT3G25790.1 34.586 133 74 3 152 275 127 255 2.17e-11 65.9
Msa1129630 AT3G10760.1 53.704 54 24 1 216 269 105 157 2.83e-11 65.1
Msa1129630 AT2G01760.3 43.902 82 43 2 216 295 135 215 4.12e-11 64.3
Msa1129630 AT2G01760.1 43.902 82 43 2 216 295 200 280 4.67e-11 64.7
Msa1129630 AT2G01760.2 43.902 82 43 2 216 295 228 308 5.54e-11 64.7
Msa1129630 AT4G37180.3 48.438 64 33 0 203 266 197 260 6.43e-11 63.5
Msa1129630 AT1G49190.1 46.377 69 34 1 216 281 215 283 6.91e-11 64.3

Find 123 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGTTCTTCCCAGTCTTA+TGG 0.207188 7_3:+81610870 Msa1129630:CDS
CTTTCTCCAGGTATGTCTTT+AGG 0.231387 7_3:-81613546 None:intergenic
CACCCGGAACTTCGAAGTTT+TGG 0.243976 7_3:+81613282 Msa1129630:CDS
CCAAGAAGCTGACTCCAATT+TGG 0.256047 7_3:-81611348 None:intergenic
ATTAGATTCAAGACACCTTT+TGG 0.275565 7_3:-81612018 None:intergenic
ATGATTCTGTTAATCCAAAT+TGG 0.276239 7_3:+81611334 Msa1129630:CDS
TCTGGACTCCAACGCATTCT+AGG 0.278668 7_3:-81611850 None:intergenic
TGGTGACTCAGGTTTGTATC+TGG 0.307622 7_3:-81612216 None:intergenic
CCAAATTGGAGTCAGCTTCT+TGG 0.308074 7_3:+81611348 Msa1129630:CDS
GATCCATTGCCAGATATTCT+TGG 0.312892 7_3:+81611192 Msa1129630:CDS
TCTGCTTATTAGATTAGGTT+AGG 0.337320 7_3:-81608191 None:intergenic
ATTAATCATCAAAAGAAATA+AGG 0.337637 7_3:+81609672 Msa1129630:intron
AAGAGTCTGCTTATTAGATT+AGG 0.344025 7_3:-81608196 None:intergenic
CCCTTCGCTTCTCAGGCATT+AGG 0.349271 7_3:+81611090 Msa1129630:CDS
TCAGGAAAACCAAGAATATC+TGG 0.353256 7_3:-81611201 None:intergenic
AAGAGAAGATACCTTGAAAT+CGG 0.355737 7_3:-81608392 None:intergenic
AATTATAAAACAAAAGAAAC+AGG 0.369200 7_3:+81609786 Msa1129630:five_prime_UTR
AGATTCTCCCTTCGCTTCTC+AGG 0.383362 7_3:+81611083 Msa1129630:CDS
ACAAAAGCTTCGTGAAGTTC+TGG 0.384632 7_3:-81611868 None:intergenic
GTGTGTATATTGTCTACTTT+GGG 0.388260 7_3:-81608084 None:intergenic
TGCTGTGAAACGGGAGGAAA+AGG 0.393018 7_3:-81611045 None:intergenic
ATTGAAATCAGGACAGATAA+AGG 0.395646 7_3:+81610806 Msa1129630:intron
CTCCCGTTTCACAGCATGAT+AGG 0.396353 7_3:+81611052 Msa1129630:CDS
TGCCAAAACTTCGAAGTTCC+GGG 0.402530 7_3:-81613284 None:intergenic
GAATTATGGTTACAGGAGTA+AGG 0.405297 7_3:+81613179 Msa1129630:intron
CGTGTGTATATTGTCTACTT+TGG 0.413349 7_3:-81608085 None:intergenic
CAGAAGCAGCATACACCATC+TGG 0.414147 7_3:+81611766 Msa1129630:CDS
TCCATAAGACTGGGAAGAAC+AGG 0.416578 7_3:-81610871 None:intergenic
AATTGAGGAAATGAAATCTC+TGG 0.418669 7_3:+81613069 Msa1129630:CDS
ATAATTGCTTTCCATAAGAC+TGG 0.420183 7_3:-81610881 None:intergenic
TGCCTATCATGCTGTGAAAC+GGG 0.423721 7_3:-81611054 None:intergenic
ATGCCAAAACTTCGAAGTTC+CGG 0.424278 7_3:-81613285 None:intergenic
GGAGGAAAAGGGACGCCGCC+AGG 0.438286 7_3:-81611033 None:intergenic
TTTGCTTTCTGCTTACATCA+TGG 0.449248 7_3:-81613572 None:intergenic
AAAGATGAACGGGATAAATC+AGG 0.451170 7_3:+81613507 Msa1129630:CDS
ATCTACCCTCTCATGTTCAT+TGG 0.454358 7_3:-81613616 None:intergenic
TGTTGTTGAACCAACACAAC+AGG 0.455318 7_3:+81611380 Msa1129630:CDS
TTGCTTTCTGCTTACATCAT+GGG 0.456687 7_3:-81613571 None:intergenic
AGAATATCTGGCAATGGATC+TGG 0.459308 7_3:-81611189 None:intergenic
CTGCTTATTAGATTAGGTTA+GGG 0.460141 7_3:-81608190 None:intergenic
TGCACCTTCTGCTGCAGTGT+TGG 0.460592 7_3:+81613440 Msa1129630:CDS
ATGAAGAATTGTTGGAGAAG+AGG 0.461184 7_3:-81608340 None:intergenic
GTTGATGCTGATGCTGAAGC+TGG 0.462318 7_3:-81611811 None:intergenic
GGTGAACGATGAAAAGAATC+CGG 0.468237 7_3:-81610913 None:intergenic
ACATCATGGGAACTTTCTCC+AGG 0.474455 7_3:-81613558 None:intergenic
TGTATACCTTCTGGTGACTC+AGG 0.476063 7_3:-81612227 None:intergenic
TTGCCTATCATGCTGTGAAA+CGG 0.481947 7_3:-81611055 None:intergenic
TCATCTCAAGATGTTTCCCT+TGG 0.484323 7_3:-81613365 None:intergenic
TCAACCAATGATGAATGTCC+TGG 0.485207 7_3:+81611015 Msa1129630:CDS
CACGACGCCACCTTCTTCTC+CGG 0.487049 7_3:+81613464 Msa1129630:CDS
ATTAGGTGACAATGTGTCTT+CGG 0.494529 7_3:+81611107 Msa1129630:CDS
CATGCAGAGGCTACTCCAAA+AGG 0.496159 7_3:+81612003 Msa1129630:intron
TGATGTAAGCAGAAAGCAAA+TGG 0.496266 7_3:+81613575 Msa1129630:CDS
TTTGAGAAACAGAAACAGAT+AGG 0.496976 7_3:+81613390 Msa1129630:CDS
CAGCAGAAGGTGCATTTGAA+GGG 0.498153 7_3:-81613431 None:intergenic
AGGGAATCACTGAAGCATTA+CGG 0.500945 7_3:+81613199 Msa1129630:CDS
GCCGCCAGGACATTCATCAT+TGG 0.501664 7_3:-81611019 None:intergenic
GCAGCAGAAGGTGCATTTGA+AGG 0.504283 7_3:-81613432 None:intergenic
AAATTGTCCACCGGAGAAGA+AGG 0.507969 7_3:-81613474 None:intergenic
AGAGAAGATACCTTGAAATC+GGG 0.512720 7_3:-81608391 None:intergenic
GTGAACGATGAAAAGAATCC+GGG 0.513629 7_3:-81610912 None:intergenic
TCCATATATGAACCTGGAGG+TGG 0.532203 7_3:-81612077 None:intergenic
GAAGGTGCATTTGAAGGGGA+AGG 0.532963 7_3:-81613426 None:intergenic
AAACTAAGCCTAGAATGCGT+TGG 0.536261 7_3:+81611842 Msa1129630:CDS
ACCTAATGCCTGAGAAGCGA+AGG 0.539904 7_3:-81611091 None:intergenic
CAATGTTAGCAAAATGCTGC+AGG 0.540123 7_3:+81609847 Msa1129630:five_prime_UTR
TACTCTCACTACCACCAAGC+TGG 0.543524 7_3:-81611903 None:intergenic
ATTAGGTTAGGGCGATTAGC+CGG 0.543717 7_3:-81608179 None:intergenic
AGAAAATGATGATATATCGT+GGG 0.544394 7_3:+81611164 Msa1129630:CDS
GTGGAAGCAGTCAACCAGCT+TGG 0.551472 7_3:+81611889 Msa1129630:CDS
GATGTAGCTTGCAATGAGGC+AGG 0.552385 7_3:-81610958 None:intergenic
GAGAAACAAACCTGTTGTGT+TGG 0.559790 7_3:-81611390 None:intergenic
AATTATGGTTACAGGAGTAA+GGG 0.560396 7_3:+81613180 Msa1129630:intron
CAAAAGAAATAAGGAGCCAA+AGG 0.566874 7_3:+81609681 Msa1129630:intron
AAGAAAATGATGATATATCG+TGG 0.571936 7_3:+81611163 Msa1129630:CDS
TGAAGCATTACGGTTGCAGA+TGG 0.573866 7_3:+81613209 Msa1129630:CDS
TTGAATCTAATGAATGTTGA+GGG 0.574014 7_3:+81612030 Msa1129630:CDS
CAGATTCAAATTGAAAACCA+AGG 0.574230 7_3:+81613348 Msa1129630:CDS
TTCTGTCCAGCATGATCAGG+TGG 0.575982 7_3:+81611230 Msa1129630:CDS
TTTGCTGTCAGACCCCTGAC+AGG 0.580082 7_3:-81610934 None:intergenic
ACATTATTGTTATTATCACC+CGG 0.582369 7_3:+81613266 Msa1129630:CDS
AAACCAAGAATATCTGGCAA+TGG 0.585936 7_3:-81611195 None:intergenic
TAATTGTTATACAGATTCAA+AGG 0.586802 7_3:+81613319 Msa1129630:CDS
GACGCCACCTTCTTCTCCGG+TGG 0.587703 7_3:+81613467 Msa1129630:CDS
TTTCATCGTTCACCTGTCAG+GGG 0.589580 7_3:+81610922 Msa1129630:CDS
GAAGCAGTCAACCAGCTTGG+TGG 0.594269 7_3:+81611892 Msa1129630:CDS
GCTGTGAAACGGGAGGAAAA+GGG 0.594959 7_3:-81611044 None:intergenic
CTCCTACGCTACTTATCTTG+CGG 0.595355 7_3:-81608117 None:intergenic
CGCCGCAAGATAAGTAGCGT+AGG 0.604254 7_3:+81608115 Msa1129630:five_prime_UTR
AGATTCAAATTGAAAACCAA+GGG 0.608265 7_3:+81613349 Msa1129630:CDS
GCAAGCTTATGAGACGCAGA+TGG 0.608347 7_3:-81609717 None:intergenic
AGAACAGGTGAAGACGAAGA+AGG 0.608881 7_3:-81610856 None:intergenic
AGGTGAAGACGAAGAAGGCA+TGG 0.611132 7_3:-81610851 None:intergenic
TAATTGCTTTCCATAAGACT+GGG 0.614268 7_3:-81610880 None:intergenic
GTGTCCAACACTGCAGCAGA+AGG 0.618637 7_3:-81613444 None:intergenic
AAGTTACCAATGAACATGAG+AGG 0.619833 7_3:+81613610 Msa1129630:CDS
GCGACTTCATGAACAACTTG+AGG 0.620878 7_3:+81613242 Msa1129630:CDS
ATAAGCTTGCATGAAGCACA+TGG 0.621239 7_3:+81609730 Msa1129630:five_prime_UTR
TCATCATTGGTTGAAAACAC+AGG 0.621388 7_3:-81611006 None:intergenic
AAGCAATTATATGAAACCCC+CGG 0.622265 7_3:+81610894 Msa1129630:CDS
CTTGAATCTAATGAATGTTG+AGG 0.622537 7_3:+81612029 Msa1129630:CDS
AAGGTGCATTTGAAGGGGAA+GGG 0.624076 7_3:-81613425 None:intergenic
GACATTCCTAAAGACATACC+TGG 0.630421 7_3:+81613540 Msa1129630:CDS
AGTTACCAATGAACATGAGA+GGG 0.634728 7_3:+81613611 Msa1129630:CDS
AGCAGAAGGTGCATTTGAAG+GGG 0.635905 7_3:-81613430 None:intergenic
ACAGGTCGAACACTTCTGAT+CGG 0.639592 7_3:-81610988 None:intergenic
AGATTGTTGACTTCTCCAGA+TGG 0.656610 7_3:-81611781 None:intergenic
CGATGATGTAGCTTGCAATG+AGG 0.659256 7_3:-81610962 None:intergenic
GAAAATGATGATATATCGTG+GGG 0.660394 7_3:+81611165 Msa1129630:CDS
TACAAACCTGAGTCACCAGA+AGG 0.662240 7_3:+81612221 Msa1129630:CDS
CTATCATGCTGTGAAACGGG+AGG 0.666909 7_3:-81611051 None:intergenic
TTGTCCACCGGAGAAGAAGG+TGG 0.671117 7_3:-81613471 None:intergenic
ATTATAAAACAAAAGAAACA+GGG 0.671167 7_3:+81609787 Msa1129630:five_prime_UTR
TGAACGATGAAAAGAATCCG+GGG 0.672098 7_3:-81610911 None:intergenic
CCTAATGCCTGAGAAGCGAA+GGG 0.672541 7_3:-81611090 None:intergenic
ACCAATGATGAATGTCCTGG+CGG 0.684026 7_3:+81611018 Msa1129630:CDS
TTATAAAACAAAAGAAACAG+GGG 0.685392 7_3:+81609788 Msa1129630:five_prime_UTR
GTTTATAGAAGACAAAACAA+AGG 0.697917 7_3:+81609813 Msa1129630:five_prime_UTR
AAGTAGACAATATACACACG+TGG 0.698142 7_3:+81608088 Msa1129630:five_prime_UTR
GAGAAGTGAATGTTGCTGAG+TGG 0.714972 7_3:-81611134 None:intergenic
CTACGCTACTTATCTTGCGG+CGG 0.721667 7_3:-81608114 None:intergenic
GAACGATGAAAAGAATCCGG+GGG 0.737762 7_3:-81610910 None:intergenic
AGTAGACAATATACACACGT+GGG 0.741629 7_3:+81608089 Msa1129630:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTCTTTTATGATTAAT+AGG + chr7_3:81609900-81609919 Msa1129630:intron 10.0%
!!! ATATTTTCACAAAATATTAA+AGG - chr7_3:81612976-81612995 None:intergenic 10.0%
!! TGGATAAGATTATTAATTAT+TGG + chr7_3:81608483-81608502 Msa1129630:intron 15.0%
!! GGATAAGATTATTAATTATT+GGG + chr7_3:81608484-81608503 Msa1129630:intron 15.0%
!!! TAATCCCAATAAATTATTTT+AGG + chr7_3:81608655-81608674 Msa1129630:intron 15.0%
!! TGTACCTAAAATAATTTATT+GGG - chr7_3:81608662-81608681 None:intergenic 15.0%
!!! TTGGTTAGATTATTTTTTTA+GGG + chr7_3:81608853-81608872 Msa1129630:intron 15.0%
!! AAATTAAGAGCTTAAAAAAA+TGG - chr7_3:81609016-81609035 None:intergenic 15.0%
!!! TTTTGAAACAAATTTTTTGT+TGG - chr7_3:81609156-81609175 None:intergenic 15.0%
!!! AGTTTGTTAATAAAATACAT+GGG - chr7_3:81609528-81609547 None:intergenic 15.0%
!!! TAGTTTGTTAATAAAATACA+TGG - chr7_3:81609529-81609548 None:intergenic 15.0%
!!! TATTTCTTTTGATGATTAAT+GGG - chr7_3:81609672-81609691 None:intergenic 15.0%
!!! TTATTTCTTTTGATGATTAA+TGG - chr7_3:81609673-81609692 None:intergenic 15.0%
!! ATTAATCATCAAAAGAAATA+AGG + chr7_3:81609672-81609691 Msa1129630:intron 15.0%
!!! TTTCTTTTGAAGAAAAAAAA+TGG - chr7_3:81609767-81609786 None:intergenic 15.0%
!! AATTATAAAACAAAAGAAAC+AGG + chr7_3:81609786-81609805 Msa1129630:five_prime_UTR 15.0%
!! ATTATAAAACAAAAGAAACA+GGG + chr7_3:81609787-81609806 Msa1129630:five_prime_UTR 15.0%
!!! AAATATAAATTTTCAAGTTC+AGG + chr7_3:81610163-81610182 Msa1129630:intron 15.0%
!!! AATATAAATTTTCAAGTTCA+GGG + chr7_3:81610164-81610183 Msa1129630:intron 15.0%
!! TCGAATAAATAATAATAGAA+TGG - chr7_3:81611600-81611619 None:intergenic 15.0%
!!! TTATATTTGTTAAAGTGAAA+AGG + chr7_3:81612477-81612496 Msa1129630:intron 15.0%
!!! GTTTTAAATAAAGGAATAAT+TGG - chr7_3:81612540-81612559 None:intergenic 15.0%
!!! ACTTTTGAAGTTTTAAATAA+AGG - chr7_3:81612549-81612568 None:intergenic 15.0%
!!! TTCTATTATATTTCTATGTT+TGG - chr7_3:81612685-81612704 None:intergenic 15.0%
!! TACTATTAGTAAACATTATT+AGG - chr7_3:81612939-81612958 None:intergenic 15.0%
!! TAATAATGTTTACTAATAGT+AGG + chr7_3:81612938-81612957 Msa1129630:intron 15.0%
!! AAAAAAGAATGAAGAATTGT+TGG - chr7_3:81608351-81608370 None:intergenic 20.0%
!!! GTAATTGACTAGTATATTTT+TGG + chr7_3:81608463-81608482 Msa1129630:intron 20.0%
!! ATCATACAAATTGAAAATCA+AGG - chr7_3:81608551-81608570 None:intergenic 20.0%
!! CTGTACCTAAAATAATTTAT+TGG - chr7_3:81608663-81608682 None:intergenic 20.0%
!!! GTTGGTTAGATTATTTTTTT+AGG + chr7_3:81608852-81608871 Msa1129630:intron 20.0%
!! TTAAAAAAATGGACAATACT+TGG - chr7_3:81609005-81609024 None:intergenic 20.0%
!!! AATATTTTCACATTCTTTCA+AGG + chr7_3:81609038-81609057 Msa1129630:intron 20.0%
!! AATATTGTGATGTATTCTTA+GGG + chr7_3:81609070-81609089 Msa1129630:intron 20.0%
!!! TTGAAGTTTTGTTAATTTCA+GGG - chr7_3:81610300-81610319 None:intergenic 20.0%
!!! ATTGAAGTTTTGTTAATTTC+AGG - chr7_3:81610299-81610318 None:intergenic 20.0%
!!! TGTATAAATTTTCAAGTTCA+GGG - chr7_3:81609400-81609419 None:intergenic 20.0%
!!! ATGTATAAATTTTCAAGTTC+AGG - chr7_3:81609401-81609420 None:intergenic 20.0%
!!! GTTTGTTAATAAAATACATG+GGG - chr7_3:81609527-81609546 None:intergenic 20.0%
!!! TTTTGAAGAAAAAAAATGGA+TGG - chr7_3:81609763-81609782 None:intergenic 20.0%
!! TTATAAAACAAAAGAAACAG+GGG + chr7_3:81609788-81609807 Msa1129630:five_prime_UTR 20.0%
!!! ATATAAATTTTCAAGTTCAG+GGG + chr7_3:81610165-81610184 Msa1129630:intron 20.0%
!!! ATTGAAGTTTTGTTAATTTC+AGG + chr7_3:81610299-81610318 Msa1129630:intron 20.0%
!!! TTGAAGTTTTGTTAATTTCA+GGG + chr7_3:81610300-81610319 Msa1129630:intron 20.0%
!! TTAAAGTTGTATGAGTAAAT+AGG - chr7_3:81610366-81610385 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG + chr7_3:81610459-81610478 Msa1129630:intron 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG + chr7_3:81610460-81610479 Msa1129630:intron 20.0%
!! TTCTATTGAAAATTGAAATC+AGG + chr7_3:81610795-81610814 Msa1129630:intron 20.0%
!!! ATATATCATCATTTTCTTGA+AGG - chr7_3:81611161-81611180 None:intergenic 20.0%
!!! AATGTCAAAAAAACTGATTT+TGG + chr7_3:81611282-81611301 Msa1129630:CDS 20.0%
!!! ATGTCAAAAAAACTGATTTT+GGG + chr7_3:81611283-81611302 Msa1129630:CDS 20.0%
!! TCTATTATTATTTATTCGAG+AGG + chr7_3:81611601-81611620 Msa1129630:intron 20.0%
!!! CAAAAGACCATTTTAAAAAT+AGG + chr7_3:81612445-81612464 Msa1129630:intron 20.0%
!!! GATTGTTCCTATTTTTAAAA+TGG - chr7_3:81612455-81612474 None:intergenic 20.0%
!! TTCAAATGTAACAAGAATAA+GGG - chr7_3:81612619-81612638 None:intergenic 20.0%
!!! AATATTAAAGGAGTTTTGTT+AGG - chr7_3:81612964-81612983 None:intergenic 20.0%
!! TAATTGTTATACAGATTCAA+AGG + chr7_3:81613319-81613338 Msa1129630:CDS 20.0%
!! TAAAAACTTCAAAAGATGAA+CGG + chr7_3:81613496-81613515 Msa1129630:CDS 20.0%
!! TTATGATTTTTCTCTCAATC+TGG + chr7_3:81608507-81608526 Msa1129630:intron 25.0%
!!! ATTATTTTAGGTACAGATCA+AGG + chr7_3:81608667-81608686 Msa1129630:intron 25.0%
! TTCTGACATACATATTGTAA+AGG + chr7_3:81608745-81608764 Msa1129630:intron 25.0%
! TCTGACATACATATTGTAAA+GGG + chr7_3:81608746-81608765 Msa1129630:intron 25.0%
! AATAGTTTCTACAACAACTT+AGG - chr7_3:81608809-81608828 None:intergenic 25.0%
!! CATTTTTCATGAATTAGTGT+TGG + chr7_3:81608834-81608853 Msa1129630:intron 25.0%
!!! GTTAGATTATTTTTTTAGGG+TGG + chr7_3:81608856-81608875 Msa1129630:intron 25.0%
! GAATATTGTGATGTATTCTT+AGG + chr7_3:81609069-81609088 Msa1129630:intron 25.0%
!! AAAGTGATACTCATTTTGAA+AGG - chr7_3:81609131-81609150 None:intergenic 25.0%
!!! TGAAGTTTTGTTAATTTCAG+GGG - chr7_3:81610301-81610320 None:intergenic 25.0%
!!! TATAAATTTTCAAGTTCAGG+GGG - chr7_3:81610166-81610185 None:intergenic 25.0%
!!! GTATAAATTTTCAAGTTCAG+GGG - chr7_3:81609399-81609418 None:intergenic 25.0%
!!! TATTTTAAGCTCTACATTCT+TGG + chr7_3:81609481-81609500 Msa1129630:intron 25.0%
!!! TGTACTCATGTTTTTATTCA+TGG - chr7_3:81609570-81609589 None:intergenic 25.0%
! GTTTATAGAAGACAAAACAA+AGG + chr7_3:81609813-81609832 Msa1129630:five_prime_UTR 25.0%
! AACACTAAAAAAAAAGCAAG+AGG - chr7_3:81609875-81609894 None:intergenic 25.0%
! AGGATTATAAAAACAACTAG+CGG + chr7_3:81609920-81609939 Msa1129630:intron 25.0%
! ACAAAGTAAACAACTTATCT+TGG - chr7_3:81609972-81609991 None:intergenic 25.0%
!!! TGGTTTGTTGATAAAATACA+TGG + chr7_3:81610043-81610062 Msa1129630:intron 25.0%
!!! GGTTTGTTGATAAAATACAT+GGG + chr7_3:81610044-81610063 Msa1129630:intron 25.0%
!!! TATTTTAAGCTCTACATTCT+TGG - chr7_3:81609481-81609500 None:intergenic 25.0%
!!! TATAAATTTTCAAGTTCAGG+GGG + chr7_3:81610166-81610185 Msa1129630:intron 25.0%
!!! TGAAGTTTTGTTAATTTCAG+GGG + chr7_3:81610301-81610320 Msa1129630:intron 25.0%
!! AAAGTTGGAGTATTTATTGA+GGG - chr7_3:81610406-81610425 None:intergenic 25.0%
!! AAAAGTTGGAGTATTTATTG+AGG - chr7_3:81610407-81610426 None:intergenic 25.0%
! ATTGCAAATAGATTAAGGAA+TGG - chr7_3:81610525-81610544 None:intergenic 25.0%
! TTCCTTAATCTATTTGCAAT+TGG + chr7_3:81610525-81610544 Msa1129630:intron 25.0%
!!! GGTTAAATTTTTTACTAGTG+AGG + chr7_3:81610614-81610633 Msa1129630:intron 25.0%
!!! GGTTAAATTTTTTACTAGTG+AGG + chr7_3:81610614-81610633 Msa1129630:intron 25.0%
!! CAATTTTCAATAGAAAAAGC+AGG - chr7_3:81610790-81610809 None:intergenic 25.0%
! AAGAAAATGATGATATATCG+TGG + chr7_3:81611163-81611182 Msa1129630:CDS 25.0%
! AGAAAATGATGATATATCGT+GGG + chr7_3:81611164-81611183 Msa1129630:CDS 25.0%
!!! TGTCAAAAAAACTGATTTTG+GGG + chr7_3:81611284-81611303 Msa1129630:CDS 25.0%
! ATGATTCTGTTAATCCAAAT+TGG + chr7_3:81611334-81611353 Msa1129630:CDS 25.0%
! GTTAATAGAAATGAAAACCT+AGG - chr7_3:81611563-81611582 None:intergenic 25.0%
! TTGAATCTAATGAATGTTGA+GGG + chr7_3:81612030-81612049 Msa1129630:CDS 25.0%
!!! TGCTACCAATTTTTTTTTTG+TGG + chr7_3:81612291-81612310 Msa1129630:intron 25.0%
! CACATCCACAAAAAAAAAAT+TGG - chr7_3:81612299-81612318 None:intergenic 25.0%
!!! ATTTTTTTTTTGTGGATGTG+TGG + chr7_3:81612299-81612318 Msa1129630:intron 25.0%
! GGATTGATAAAAAGAAGATA+TGG + chr7_3:81612414-81612433 Msa1129630:intron 25.0%
! TTTGTTAAAGTGAAAAGGAA+AGG + chr7_3:81612482-81612501 Msa1129630:intron 25.0%
!!! TCTATTTTTCTCTCATTCAA+AGG + chr7_3:81612572-81612591 Msa1129630:intron 25.0%
! TCAAATGTAACAAGAATAAG+GGG - chr7_3:81612618-81612637 None:intergenic 25.0%
! CTTCAAATGTAACAAGAATA+AGG - chr7_3:81612620-81612639 None:intergenic 25.0%
! ATAGAATACGATTACACAAT+AGG + chr7_3:81612730-81612749 Msa1129630:intron 25.0%
! CACATTAATGTAATAATTGC+TGG + chr7_3:81612895-81612914 Msa1129630:intron 25.0%
! TATAAGAGTAAGAATGTGAA+TGG + chr7_3:81612993-81613012 Msa1129630:intron 25.0%
!! ACATTATTGTTATTATCACC+CGG + chr7_3:81613266-81613285 Msa1129630:CDS 25.0%
! AGATTCAAATTGAAAACCAA+GGG + chr7_3:81613349-81613368 Msa1129630:CDS 25.0%
! AAAAACTTCAAAAGATGAAC+GGG + chr7_3:81613497-81613516 Msa1129630:CDS 25.0%
GTGTGTATATTGTCTACTTT+GGG - chr7_3:81608087-81608106 None:intergenic 30.0%
ATCGAATGAGAGAGAAAAAT+AGG + chr7_3:81608152-81608171 Msa1129630:five_prime_UTR 30.0%
AGAGAGAAAAATAGGTTATC+CGG + chr7_3:81608160-81608179 Msa1129630:five_prime_UTR 30.0%
CTGCTTATTAGATTAGGTTA+GGG - chr7_3:81608193-81608212 None:intergenic 30.0%
TCTGCTTATTAGATTAGGTT+AGG - chr7_3:81608194-81608213 None:intergenic 30.0%
AAGAGTCTGCTTATTAGATT+AGG - chr7_3:81608199-81608218 None:intergenic 30.0%
AAGAGAAGATACCTTGAAAT+CGG - chr7_3:81608395-81608414 None:intergenic 30.0%
GTTAAAGTGATTGATGAACA+CGG - chr7_3:81608621-81608640 None:intergenic 30.0%
CTGACATACATATTGTAAAG+GGG + chr7_3:81608747-81608766 Msa1129630:intron 30.0%
!! TGATACTCATTTTGAAAGGA+GGG - chr7_3:81609127-81609146 None:intergenic 30.0%
! CCTATTTACTCAAGTTGTAT+TGG - chr7_3:81609198-81609217 None:intergenic 30.0%
CCAATACAACTTGAGTAAAT+AGG + chr7_3:81609195-81609214 Msa1129630:intron 30.0%
TGACGAAACTTACAATTTCA+GGG - chr7_3:81610330-81610349 None:intergenic 30.0%
TTGACGAAACTTACAATTTC+AGG - chr7_3:81610329-81610348 None:intergenic 30.0%
!!! GAAGTTTTGTTAATTTCAGG+GGG - chr7_3:81610302-81610321 None:intergenic 30.0%
ATTAACGTTGTGCAATTTCA+GGG - chr7_3:81610272-81610291 None:intergenic 30.0%
TGACTAACAGAAGAATTTGA+CGG - chr7_3:81610237-81610256 None:intergenic 30.0%
AACAAACTATTCAACCTAGA+AGG + chr7_3:81609540-81609559 Msa1129630:intron 30.0%
GGGATTATAAAAACAACTAG+CGG - chr7_3:81609652-81609671 None:intergenic 30.0%
TGTACTCATGTTCTTATTCA+TGG + chr7_3:81610002-81610021 Msa1129630:intron 30.0%
TGACTAACAGAAGAATTTGA+CGG + chr7_3:81610237-81610256 Msa1129630:intron 30.0%
ATTAACGTTGTGCAATTTCA+GGG + chr7_3:81610272-81610291 Msa1129630:intron 30.0%
!!! GAAGTTTTGTTAATTTCAGG+GGG + chr7_3:81610302-81610321 Msa1129630:intron 30.0%
!!! AAGTTTTGTTAATTTCAGGG+GGG + chr7_3:81610303-81610322 Msa1129630:intron 30.0%
TTGACGAAACTTACAATTTC+AGG + chr7_3:81610329-81610348 Msa1129630:intron 30.0%
TGACGAAACTTACAATTTCA+GGG + chr7_3:81610330-81610349 Msa1129630:intron 30.0%
AAATTGTGTGAGAGAAAAGT+TGG - chr7_3:81610421-81610440 None:intergenic 30.0%
AGCCAATTGCAAATAGATTA+AGG - chr7_3:81610530-81610549 None:intergenic 30.0%
TTTAAACTTGTGAGCAAAGA+AGG + chr7_3:81610651-81610670 Msa1129630:intron 30.0%
ATTGAAATCAGGACAGATAA+AGG + chr7_3:81610806-81610825 Msa1129630:intron 30.0%
TAATTGCTTTCCATAAGACT+GGG - chr7_3:81610883-81610902 None:intergenic 30.0%
ATAATTGCTTTCCATAAGAC+TGG - chr7_3:81610884-81610903 None:intergenic 30.0%
GAAAATGATGATATATCGTG+GGG + chr7_3:81611165-81611184 Msa1129630:CDS 30.0%
TAGAACTGATCATCCAAATA+TGG - chr7_3:81611632-81611651 None:intergenic 30.0%
ATAATGATGTTAACATGCAG+AGG + chr7_3:81611990-81612009 Msa1129630:intron 30.0%
! ATTAGATTCAAGACACCTTT+TGG - chr7_3:81612021-81612040 None:intergenic 30.0%
CTTGAATCTAATGAATGTTG+AGG + chr7_3:81612029-81612048 Msa1129630:CDS 30.0%
! TTTTTACATGGTAGATGGTA+AGG - chr7_3:81612056-81612075 None:intergenic 30.0%
ACCTGCTGTATAAAACAATA+GGG - chr7_3:81612269-81612288 None:intergenic 30.0%
AACCTGCTGTATAAAACAAT+AGG - chr7_3:81612270-81612289 None:intergenic 30.0%
CATCTTTCTCGAAACTATAA+GGG - chr7_3:81612334-81612353 None:intergenic 30.0%
ACATCTTTCTCGAAACTATA+AGG - chr7_3:81612335-81612354 None:intergenic 30.0%
! CTTTTTATCAATCCCAACAT+AGG - chr7_3:81612408-81612427 None:intergenic 30.0%
AAATGTAACAAGAATAAGGG+GGG - chr7_3:81612616-81612635 None:intergenic 30.0%
CAAATGTAACAAGAATAAGG+GGG - chr7_3:81612617-81612636 None:intergenic 30.0%
! TATATTTCTATGTTTGGTCC+TGG - chr7_3:81612679-81612698 None:intergenic 30.0%
TAGATAAATAGGGAATCTGA+AGG - chr7_3:81612831-81612850 None:intergenic 30.0%
AGGCAGTTACTAGATAAATA+GGG - chr7_3:81612841-81612860 None:intergenic 30.0%
TAGGCAGTTACTAGATAAAT+AGG - chr7_3:81612842-81612861 None:intergenic 30.0%
ATGTGCAACAGTTATGTATT+AGG - chr7_3:81612880-81612899 None:intergenic 30.0%
GAAAAAGATGAGTTCAATTG+AGG + chr7_3:81613054-81613073 Msa1129630:CDS 30.0%
TCCATTGTTTCCTTGAATTA+TGG + chr7_3:81613165-81613184 Msa1129630:intron 30.0%
ACCATAATTCAAGGAAACAA+TGG - chr7_3:81613169-81613188 None:intergenic 30.0%
TTTCCTTGAATTATGGTTAC+AGG + chr7_3:81613172-81613191 Msa1129630:intron 30.0%
AATTATGGTTACAGGAGTAA+GGG + chr7_3:81613180-81613199 Msa1129630:intron 30.0%
CAGATTCAAATTGAAAACCA+AGG + chr7_3:81613348-81613367 Msa1129630:CDS 30.0%
TTTGAGAAACAGAAACAGAT+AGG + chr7_3:81613390-81613409 Msa1129630:CDS 30.0%
! GAAGTTTTTAAATTGTCCAC+CGG - chr7_3:81613486-81613505 None:intergenic 30.0%
CGTGTGTATATTGTCTACTT+TGG - chr7_3:81608088-81608107 None:intergenic 35.0%
AAGTAGACAATATACACACG+TGG + chr7_3:81608088-81608107 Msa1129630:five_prime_UTR 35.0%
AGTAGACAATATACACACGT+GGG + chr7_3:81608089-81608108 Msa1129630:five_prime_UTR 35.0%
! TTAGCAGAGTCCTAGATTTT+TGG + chr7_3:81608223-81608242 Msa1129630:five_prime_UTR 35.0%
AAAGCAGACTCCAAAAATCT+AGG - chr7_3:81608236-81608255 None:intergenic 35.0%
ATGAAGAATTGTTGGAGAAG+AGG - chr7_3:81608343-81608362 None:intergenic 35.0%
AGAGAAGATACCTTGAAATC+GGG - chr7_3:81608394-81608413 None:intergenic 35.0%
CATGAACTAACGCATATACA+TGG - chr7_3:81608586-81608605 None:intergenic 35.0%
TGTAGTTGCATCATGTTCTT+TGG + chr7_3:81608710-81608729 Msa1129630:intron 35.0%
AGTTTCTACAACAACTTAGG+TGG - chr7_3:81608806-81608825 None:intergenic 35.0%
!!! ATTTTTTTAGGGTGGCACTT+TGG + chr7_3:81608864-81608883 Msa1129630:intron 35.0%
CATTAAATCCTGACCATTGA+TGG - chr7_3:81608961-81608980 None:intergenic 35.0%
CATCAATGGTCAGGATTTAA+TGG + chr7_3:81608959-81608978 Msa1129630:intron 35.0%
CAATACTTGGATGCCATTAA+TGG - chr7_3:81608992-81609011 None:intergenic 35.0%
!! ATACTCATTTTGAAAGGAGG+GGG - chr7_3:81609125-81609144 None:intergenic 35.0%
!! GATACTCATTTTGAAAGGAG+GGG - chr7_3:81609126-81609145 None:intergenic 35.0%
!! GTGATACTCATTTTGAAAGG+AGG - chr7_3:81609128-81609147 None:intergenic 35.0%
ACGAAACTTACAATTTCAGG+GGG - chr7_3:81610332-81610351 None:intergenic 35.0%
GACGAAACTTACAATTTCAG+GGG - chr7_3:81610331-81610350 None:intergenic 35.0%
TTAACGTTGTGCAATTTCAG+GGG - chr7_3:81610273-81610292 None:intergenic 35.0%
GATTAACGTTGTGCAATTTC+AGG - chr7_3:81610271-81610290 None:intergenic 35.0%
TAACAGAAGAATTTGACGGA+GGG - chr7_3:81610241-81610260 None:intergenic 35.0%
TGCACATAAGTGCAAAACTT+CGG - chr7_3:81609370-81609389 None:intergenic 35.0%
TTATTCATGGTACACCTTCT+AGG - chr7_3:81610015-81610034 None:intergenic 35.0%
CAAAAGAAATAAGGAGCCAA+AGG + chr7_3:81609681-81609700 Msa1129630:intron 35.0%
TTATTCATGGTACACCTTCT+AGG + chr7_3:81610015-81610034 Msa1129630:intron 35.0%
AACAAACCATTCAACCTAGA+AGG - chr7_3:81610032-81610051 None:intergenic 35.0%
! TTTTGCAAGTGCAAAACTTC+AGG + chr7_3:81610191-81610210 Msa1129630:intron 35.0%
TTTGCAAGTGCAAAACTTCA+GGG + chr7_3:81610192-81610211 Msa1129630:intron 35.0%
TAACAGAAGAATTTGACGGA+GGG + chr7_3:81610241-81610260 Msa1129630:intron 35.0%
GATTAACGTTGTGCAATTTC+AGG + chr7_3:81610271-81610290 Msa1129630:intron 35.0%
TTAACGTTGTGCAATTTCAG+GGG + chr7_3:81610273-81610292 Msa1129630:intron 35.0%
GACGAAACTTACAATTTCAG+GGG + chr7_3:81610331-81610350 Msa1129630:intron 35.0%
ACGAAACTTACAATTTCAGG+GGG + chr7_3:81610332-81610351 Msa1129630:intron 35.0%
!! AAGCGACAGTCATTTTGAAA+CGG + chr7_3:81610551-81610570 Msa1129630:intron 35.0%
AGTTTAAACTTGTGAGCAAC+AGG + chr7_3:81610707-81610726 Msa1129630:intron 35.0%
GTTTAAACTTGTGAGCAACA+GGG + chr7_3:81610708-81610727 Msa1129630:intron 35.0%
AGCAACAGGGTTATTTATGT+TGG + chr7_3:81610721-81610740 Msa1129630:intron 35.0%
AAGCAATTATATGAAACCCC+CGG + chr7_3:81610894-81610913 Msa1129630:CDS 35.0%
! TCATCATTGGTTGAAAACAC+AGG - chr7_3:81611009-81611028 None:intergenic 35.0%
ATTAGGTGACAATGTGTCTT+CGG + chr7_3:81611107-81611126 Msa1129630:CDS 35.0%
AAACCAAGAATATCTGGCAA+TGG - chr7_3:81611198-81611217 None:intergenic 35.0%
TCAGGAAAACCAAGAATATC+TGG - chr7_3:81611204-81611223 None:intergenic 35.0%
TGCTGGACAGAAAAAATTTC+AGG - chr7_3:81611222-81611241 None:intergenic 35.0%
!! AAAAAACTGATTTTGGGGAG+TGG + chr7_3:81611289-81611308 Msa1129630:CDS 35.0%
!! AAAAACTGATTTTGGGGAGT+GGG + chr7_3:81611290-81611309 Msa1129630:CDS 35.0%
ACTTGAACAAGAACAATCCT+AGG + chr7_3:81611432-81611451 Msa1129630:intron 35.0%
TAGAAATGAAAACCTAGGTG+AGG - chr7_3:81611558-81611577 None:intergenic 35.0%
TCGAGAGGAAAATCCATATT+TGG + chr7_3:81611616-81611635 Msa1129630:intron 35.0%
ATACAACCTAAAGGGGAATA+GGG - chr7_3:81611694-81611713 None:intergenic 35.0%
!! ATATCCTACTTTTCTGATGC+AGG + chr7_3:81611729-81611748 Msa1129630:intron 35.0%
AAATCCATATATGAACCTGG+AGG - chr7_3:81612083-81612102 None:intergenic 35.0%
GGAAAATCCATATATGAACC+TGG - chr7_3:81612086-81612105 None:intergenic 35.0%
ACAAGCTCAATTTAAGAGGA+CGG - chr7_3:81612107-81612126 None:intergenic 35.0%
TCCTCTTAAATTGAGCTTGT+TGG + chr7_3:81612107-81612126 Msa1129630:intron 35.0%
ACCAACAAGCTCAATTTAAG+AGG - chr7_3:81612111-81612130 None:intergenic 35.0%
ATAAAAATCGACATACACGC+CGG - chr7_3:81612141-81612160 None:intergenic 35.0%
!! TCCCTATTGTTTTATACAGC+AGG + chr7_3:81612265-81612284 Msa1129630:intron 35.0%
TTCTTCTTCATGTCCTATGT+TGG + chr7_3:81612392-81612411 Msa1129630:intron 35.0%
TCTTCTTCATGTCCTATGTT+GGG + chr7_3:81612393-81612412 Msa1129630:intron 35.0%
AATGTAACAAGAATAAGGGG+GGG - chr7_3:81612615-81612634 None:intergenic 35.0%
TAGGAAGCAGTTATGTTTCT+AGG - chr7_3:81612861-81612880 None:intergenic 35.0%
! TTTTTCTCAGAAGTTTCTGC+AGG - chr7_3:81613040-81613059 None:intergenic 35.0%
ACTCCTGTAACCATAATTCA+AGG - chr7_3:81613178-81613197 None:intergenic 35.0%
GAATTATGGTTACAGGAGTA+AGG + chr7_3:81613179-81613198 Msa1129630:intron 35.0%
AAAGATGAACGGGATAAATC+AGG + chr7_3:81613507-81613526 Msa1129630:CDS 35.0%
TTGCTTTCTGCTTACATCAT+GGG - chr7_3:81613574-81613593 None:intergenic 35.0%
TTTGCTTTCTGCTTACATCA+TGG - chr7_3:81613575-81613594 None:intergenic 35.0%
TGATGTAAGCAGAAAGCAAA+TGG + chr7_3:81613575-81613594 Msa1129630:CDS 35.0%
AAGTTACCAATGAACATGAG+AGG + chr7_3:81613610-81613629 Msa1129630:CDS 35.0%
AGTTACCAATGAACATGAGA+GGG + chr7_3:81613611-81613630 Msa1129630:CDS 35.0%
AAATCGGGAAAAAGCGGTAA+TGG - chr7_3:81608379-81608398 None:intergenic 40.0%
ACCTTGAAATCGGGAAAAAG+CGG - chr7_3:81608385-81608404 None:intergenic 40.0%
CATACATATTGTAAAGGGGC+TGG + chr7_3:81608751-81608770 Msa1129630:intron 40.0%
!! TAATGGCATGGTGCCATTAA+TGG - chr7_3:81608892-81608911 None:intergenic 40.0%
ATGGTCAGGATTTAATGGCA+CGG + chr7_3:81608964-81608983 Msa1129630:intron 40.0%
CGAAACTTACAATTTCAGGG+GGG - chr7_3:81610333-81610352 None:intergenic 40.0%
TAACGTTGTGCAATTTCAGG+GGG - chr7_3:81610274-81610293 None:intergenic 40.0%
AACAGAAGAATTTGACGGAG+GGG - chr7_3:81610242-81610261 None:intergenic 40.0%
CTAACAGAAGAATTTGACGG+AGG - chr7_3:81610240-81610259 None:intergenic 40.0%
ACATAAGTGCAAAACTTCGG+GGG - chr7_3:81609367-81609386 None:intergenic 40.0%
CACATAAGTGCAAAACTTCG+GGG - chr7_3:81609368-81609387 None:intergenic 40.0%
GCACATAAGTGCAAAACTTC+GGG - chr7_3:81609369-81609388 None:intergenic 40.0%
TGGAAAAAAGACTGCACCTT+TGG - chr7_3:81609700-81609719 None:intergenic 40.0%
ATAAGCTTGCATGAAGCACA+TGG + chr7_3:81609730-81609749 Msa1129630:five_prime_UTR 40.0%
CAATGTTAGCAAAATGCTGC+AGG + chr7_3:81609847-81609866 Msa1129630:five_prime_UTR 40.0%
TTGCAAGTGCAAAACTTCAG+GGG + chr7_3:81610193-81610212 Msa1129630:intron 40.0%
CTAACAGAAGAATTTGACGG+AGG + chr7_3:81610240-81610259 Msa1129630:intron 40.0%
AACAGAAGAATTTGACGGAG+GGG + chr7_3:81610242-81610261 Msa1129630:intron 40.0%
TAACGTTGTGCAATTTCAGG+GGG + chr7_3:81610274-81610293 Msa1129630:intron 40.0%
CGAAACTTACAATTTCAGGG+GGG + chr7_3:81610333-81610352 Msa1129630:intron 40.0%
GAAACTTACAATTTCAGGGG+GGG + chr7_3:81610334-81610353 Msa1129630:intron 40.0%
!!! GACAGTCATTTTGAAACGGA+GGG + chr7_3:81610555-81610574 Msa1129630:intron 40.0%
! GTGCTTTTAACGACACAAGA+AGG + chr7_3:81610593-81610612 Msa1129630:intron 40.0%
TGAACGATGAAAAGAATCCG+GGG - chr7_3:81610914-81610933 None:intergenic 40.0%
GTGAACGATGAAAAGAATCC+GGG - chr7_3:81610915-81610934 None:intergenic 40.0%
GGTGAACGATGAAAAGAATC+CGG - chr7_3:81610916-81610935 None:intergenic 40.0%
! TTTTCATCGTTCACCTGTCA+GGG + chr7_3:81610921-81610940 Msa1129630:CDS 40.0%
TCAACCAATGATGAATGTCC+TGG + chr7_3:81611015-81611034 Msa1129630:CDS 40.0%
TTGCCTATCATGCTGTGAAA+CGG - chr7_3:81611058-81611077 None:intergenic 40.0%
AGAATATCTGGCAATGGATC+TGG - chr7_3:81611192-81611211 None:intergenic 40.0%
GATCCATTGCCAGATATTCT+TGG + chr7_3:81611192-81611211 Msa1129630:CDS 40.0%
! TTTTTCTGTCCAGCATGATC+AGG + chr7_3:81611227-81611246 Msa1129630:CDS 40.0%
TGTTGTTGAACCAACACAAC+AGG + chr7_3:81611380-81611399 Msa1129630:CDS 40.0%
GAGAAACAAACCTGTTGTGT+TGG - chr7_3:81611393-81611412 None:intergenic 40.0%
GGATTGTTCTTGTTCAAGTC+AGG - chr7_3:81611431-81611450 None:intergenic 40.0%
AGGTAAGTAAAGTTTGGCCT+AGG - chr7_3:81611452-81611471 None:intergenic 40.0%
AAATGAAAACCTAGGTGAGG+AGG - chr7_3:81611555-81611574 None:intergenic 40.0%
GGGAATGAACTATATGCACA+TGG - chr7_3:81611674-81611693 None:intergenic 40.0%
TTCATTCCCTATTCCCCTTT+AGG + chr7_3:81611685-81611704 Msa1129630:intron 40.0%
CATACAACCTAAAGGGGAAT+AGG - chr7_3:81611695-81611714 None:intergenic 40.0%
!! ATTCCCCTTTAGGTTGTATG+CGG + chr7_3:81611695-81611714 Msa1129630:intron 40.0%
!! AGATTGTTGACTTCTCCAGA+TGG - chr7_3:81611784-81611803 None:intergenic 40.0%
AAACTAAGCCTAGAATGCGT+TGG + chr7_3:81611842-81611861 Msa1129630:CDS 40.0%
ACAAAAGCTTCGTGAAGTTC+TGG - chr7_3:81611871-81611890 None:intergenic 40.0%
! AGAACTTCACGAAGCTTTTG+TGG + chr7_3:81611870-81611889 Msa1129630:CDS 40.0%
GTCAAACGAAGGATGAGATT+AGG - chr7_3:81611941-81611960 None:intergenic 40.0%
GAAGAAACGTTCATGAGAGA+AGG - chr7_3:81611963-81611982 None:intergenic 40.0%
! GTGGCTTTTTACATGGTAGA+TGG - chr7_3:81612061-81612080 None:intergenic 40.0%
GTACACTCTTGTATACCTTC+TGG - chr7_3:81612239-81612258 None:intergenic 40.0%
CACAGAAACTTGATGAAACC+AGG + chr7_3:81612658-81612677 Msa1129630:intron 40.0%
! AGGGAATCACTGAAGCATTA+CGG + chr7_3:81613199-81613218 Msa1129630:CDS 40.0%
ATGCCAAAACTTCGAAGTTC+CGG - chr7_3:81613288-81613307 None:intergenic 40.0%
TCATCTCAAGATGTTTCCCT+TGG - chr7_3:81613368-81613387 None:intergenic 40.0%
GACATTCCTAAAGACATACC+TGG + chr7_3:81613540-81613559 Msa1129630:CDS 40.0%
CTTTCTCCAGGTATGTCTTT+AGG - chr7_3:81613549-81613568 None:intergenic 40.0%
ATCTACCCTCTCATGTTCAT+TGG - chr7_3:81613619-81613638 None:intergenic 40.0%
! TGAATCTTCGCTCGTTTTGT+TGG - chr7_3:81613663-81613682 None:intergenic 40.0%
CTCCTACGCTACTTATCTTG+CGG - chr7_3:81608120-81608139 None:intergenic 45.0%
ATTAGGTTAGGGCGATTAGC+CGG - chr7_3:81608182-81608201 None:intergenic 45.0%
!!! ACCGCTTTTTCCCGATTTCA+AGG + chr7_3:81608381-81608400 Msa1129630:five_prime_UTR 45.0%
!! TGGCACTTTGGTGCCATTAA+TGG + chr7_3:81608876-81608895 Msa1129630:intron 45.0%
ACATCACACACACACACTTG+GGG - chr7_3:81608926-81608945 None:intergenic 45.0%
CACATCACACACACACACTT+GGG - chr7_3:81608927-81608946 None:intergenic 45.0%
ACACATCACACACACACACT+TGG - chr7_3:81608928-81608947 None:intergenic 45.0%
TGTGTGTGTGATGTGTGTGT+TGG + chr7_3:81608932-81608951 Msa1129630:intron 45.0%
GTGTGTGTGATGTGTGTGTT+GGG + chr7_3:81608933-81608952 Msa1129630:intron 45.0%
!! TAATGGCACGGTGCCATTAA+TGG + chr7_3:81608976-81608995 Msa1129630:intron 45.0%
AACGTTGTGCAATTTCAGGG+GGG - chr7_3:81610275-81610294 None:intergenic 45.0%
ACAGAAGAATTTGACGGAGG+GGG - chr7_3:81610243-81610262 None:intergenic 45.0%
CATAAGTGCAAAACTTCGGG+GGG - chr7_3:81609366-81609385 None:intergenic 45.0%
! GGTACACCTTCTAGGTTGAA+TGG + chr7_3:81610023-81610042 Msa1129630:intron 45.0%
TGCAAGTGCAAAACTTCAGG+GGG + chr7_3:81610194-81610213 Msa1129630:intron 45.0%
!!! CGACAGTCATTTTGAAACGG+AGG + chr7_3:81610554-81610573 Msa1129630:intron 45.0%
AGAACAGGTGAAGACGAAGA+AGG - chr7_3:81610859-81610878 None:intergenic 45.0%
ACCTGTTCTTCCCAGTCTTA+TGG + chr7_3:81610870-81610889 Msa1129630:CDS 45.0%
TCCATAAGACTGGGAAGAAC+AGG - chr7_3:81610874-81610893 None:intergenic 45.0%
GAACGATGAAAAGAATCCGG+GGG - chr7_3:81610913-81610932 None:intergenic 45.0%
! CTTTTCATCGTTCACCTGTC+AGG + chr7_3:81610920-81610939 Msa1129630:CDS 45.0%
TTTCATCGTTCACCTGTCAG+GGG + chr7_3:81610922-81610941 Msa1129630:CDS 45.0%
! CGATGATGTAGCTTGCAATG+AGG - chr7_3:81610965-81610984 None:intergenic 45.0%
ACAGGTCGAACACTTCTGAT+CGG - chr7_3:81610991-81611010 None:intergenic 45.0%
ACCAATGATGAATGTCCTGG+CGG + chr7_3:81611018-81611037 Msa1129630:CDS 45.0%
TGCCTATCATGCTGTGAAAC+GGG - chr7_3:81611057-81611076 None:intergenic 45.0%
GAGAAGTGAATGTTGCTGAG+TGG - chr7_3:81611137-81611156 None:intergenic 45.0%
! TGTTTTCCACCTGATCATGC+TGG - chr7_3:81611239-81611258 None:intergenic 45.0%
! CCAAGAAGCTGACTCCAATT+TGG - chr7_3:81611351-81611370 None:intergenic 45.0%
CCAAATTGGAGTCAGCTTCT+TGG + chr7_3:81611348-81611367 Msa1129630:CDS 45.0%
GCTGGGAGGTAAGTAAAGTT+TGG - chr7_3:81611458-81611477 None:intergenic 45.0%
TCTTAAACCTCCAGCTCCTA+AGG - chr7_3:81611503-81611522 None:intergenic 45.0%
ACAGCCGCATACAACCTAAA+GGG - chr7_3:81611702-81611721 None:intergenic 45.0%
AACAGCCGCATACAACCTAA+AGG - chr7_3:81611703-81611722 None:intergenic 45.0%
ATCGCCTGCATCAGAAAAGT+AGG - chr7_3:81611736-81611755 None:intergenic 45.0%
CATGAGAGAAGGTCAAACGA+AGG - chr7_3:81611952-81611971 None:intergenic 45.0%
TCCATATATGAACCTGGAGG+TGG - chr7_3:81612080-81612099 None:intergenic 45.0%
TGGTGACTCAGGTTTGTATC+TGG - chr7_3:81612219-81612238 None:intergenic 45.0%
TACAAACCTGAGTCACCAGA+AGG + chr7_3:81612221-81612240 Msa1129630:CDS 45.0%
TGTATACCTTCTGGTGACTC+AGG - chr7_3:81612230-81612249 None:intergenic 45.0%
GATTACACAATAGGCTCCCT+AGG + chr7_3:81612739-81612758 Msa1129630:intron 45.0%
CCAAGACTCTCGAATTCCTA+GGG - chr7_3:81612758-81612777 None:intergenic 45.0%
CCTAGGAATTCGAGAGTCTT+GGG + chr7_3:81612756-81612775 Msa1129630:intron 45.0%
! TGAAGCATTACGGTTGCAGA+TGG + chr7_3:81613209-81613228 Msa1129630:CDS 45.0%
GCGACTTCATGAACAACTTG+AGG + chr7_3:81613242-81613261 Msa1129630:CDS 45.0%
TGCCAAAACTTCGAAGTTCC+GGG - chr7_3:81613287-81613306 None:intergenic 45.0%
AAGGTGCATTTGAAGGGGAA+GGG - chr7_3:81613428-81613447 None:intergenic 45.0%
! AGCAGAAGGTGCATTTGAAG+GGG - chr7_3:81613433-81613452 None:intergenic 45.0%
! CAGCAGAAGGTGCATTTGAA+GGG - chr7_3:81613434-81613453 None:intergenic 45.0%
AAATTGTCCACCGGAGAAGA+AGG - chr7_3:81613477-81613496 None:intergenic 45.0%
ACATCATGGGAACTTTCTCC+AGG - chr7_3:81613561-81613580 None:intergenic 45.0%
!! ATCTTCGCTCGTTTTGTTGG+AGG - chr7_3:81613660-81613679 None:intergenic 45.0%
CTACGCTACTTATCTTGCGG+CGG - chr7_3:81608117-81608136 None:intergenic 50.0%
TGGCACCATGCCATTAGATC+AGG + chr7_3:81608896-81608915 Msa1129630:intron 50.0%
GGCACCATGCCATTAGATCA+GGG + chr7_3:81608897-81608916 Msa1129630:intron 50.0%
GTGACCCTGATCTAATGGCA+TGG - chr7_3:81608904-81608923 None:intergenic 50.0%
TTGGGGTGACCCTGATCTAA+TGG - chr7_3:81608909-81608928 None:intergenic 50.0%
! TGTGTGTTGGGTGCCATCAA+TGG + chr7_3:81608945-81608964 Msa1129630:intron 50.0%
GCAAGCTTATGAGACGCAGA+TGG - chr7_3:81609720-81609739 None:intergenic 50.0%
GCAAGTGCAAAACTTCAGGG+GGG + chr7_3:81610195-81610214 Msa1129630:intron 50.0%
AGGTGAAGACGAAGAAGGCA+TGG - chr7_3:81610854-81610873 None:intergenic 50.0%
! GATGTAGCTTGCAATGAGGC+AGG - chr7_3:81610961-81610980 None:intergenic 50.0%
GCTGTGAAACGGGAGGAAAA+GGG - chr7_3:81611047-81611066 None:intergenic 50.0%
TGCTGTGAAACGGGAGGAAA+AGG - chr7_3:81611048-81611067 None:intergenic 50.0%
CTATCATGCTGTGAAACGGG+AGG - chr7_3:81611054-81611073 None:intergenic 50.0%
CTCCCGTTTCACAGCATGAT+AGG + chr7_3:81611052-81611071 Msa1129630:CDS 50.0%
AGATTCTCCCTTCGCTTCTC+AGG + chr7_3:81611083-81611102 Msa1129630:CDS 50.0%
CCTAATGCCTGAGAAGCGAA+GGG - chr7_3:81611093-81611112 None:intergenic 50.0%
ACCTAATGCCTGAGAAGCGA+AGG - chr7_3:81611094-81611113 None:intergenic 50.0%
TTCTGTCCAGCATGATCAGG+TGG + chr7_3:81611230-81611249 Msa1129630:CDS 50.0%
CAAATGGGCCCTAGTGAGTT+CGG - chr7_3:81611480-81611499 None:intergenic 50.0%
CTCCAGCTCCTAAGGCAAAT+GGG - chr7_3:81611495-81611514 None:intergenic 50.0%
CAGCCGCATACAACCTAAAG+GGG - chr7_3:81611701-81611720 None:intergenic 50.0%
! TTTTCTGATGCAGGCGATGC+AGG + chr7_3:81611738-81611757 Msa1129630:intron 50.0%
CAGAAGCAGCATACACCATC+TGG + chr7_3:81611766-81611785 Msa1129630:CDS 50.0%
GTTGATGCTGATGCTGAAGC+TGG - chr7_3:81611814-81611833 None:intergenic 50.0%
TCTGGACTCCAACGCATTCT+AGG - chr7_3:81611853-81611872 None:intergenic 50.0%
TACTCTCACTACCACCAAGC+TGG - chr7_3:81611906-81611925 None:intergenic 50.0%
CATGCAGAGGCTACTCCAAA+AGG + chr7_3:81612003-81612022 Msa1129630:intron 50.0%
! CCTGGAGGTGGCTTTTTACA+TGG - chr7_3:81612068-81612087 None:intergenic 50.0%
CCATGTAAAAAGCCACCTCC+AGG + chr7_3:81612065-81612084 Msa1129630:CDS 50.0%
GCCACCTCCAGGTTCATATA+TGG + chr7_3:81612076-81612095 Msa1129630:intron 50.0%
CCCTAGGAATTCGAGAGTCT+TGG + chr7_3:81612755-81612774 Msa1129630:intron 50.0%
CCCAAGACTCTCGAATTCCT+AGG - chr7_3:81612759-81612778 None:intergenic 50.0%
TCTCTCCCTCCAAGAATTCG+AGG + chr7_3:81612779-81612798 Msa1129630:intron 50.0%
CTCTCCCTCCAAGAATTCGA+GGG + chr7_3:81612780-81612799 Msa1129630:intron 50.0%
CAAGCCCTCGAATTCTTGGA+GGG - chr7_3:81612787-81612806 None:intergenic 50.0%
AGACCAAGCCCTCGAATTCT+TGG - chr7_3:81612791-81612810 None:intergenic 50.0%
! CACCCGGAACTTCGAAGTTT+TGG + chr7_3:81613282-81613301 Msa1129630:CDS 50.0%
! GAAGGTGCATTTGAAGGGGA+AGG - chr7_3:81613429-81613448 None:intergenic 50.0%
! GCAGCAGAAGGTGCATTTGA+AGG - chr7_3:81613435-81613454 None:intergenic 50.0%
CGCCGCAAGATAAGTAGCGT+AGG + chr7_3:81608115-81608134 Msa1129630:five_prime_UTR 55.0%
! GTTGGGTGCCATCAATGGTC+AGG + chr7_3:81608950-81608969 Msa1129630:intron 55.0%
! TTTGCTGTCAGACCCCTGAC+AGG - chr7_3:81610937-81610956 None:intergenic 55.0%
GCCGCCAGGACATTCATCAT+TGG - chr7_3:81611022-81611041 None:intergenic 55.0%
CCCTTCGCTTCTCAGGCATT+AGG + chr7_3:81611090-81611109 Msa1129630:CDS 55.0%
CACTAGGGCCCATTTGCCTT+AGG + chr7_3:81611484-81611503 Msa1129630:intron 55.0%
CCTCCAGCTCCTAAGGCAAA+TGG - chr7_3:81611496-81611515 None:intergenic 55.0%
CCATTTGCCTTAGGAGCTGG+AGG + chr7_3:81611493-81611512 Msa1129630:intron 55.0%
GTGGAAGCAGTCAACCAGCT+TGG + chr7_3:81611889-81611908 Msa1129630:CDS 55.0%
GAAGCAGTCAACCAGCTTGG+TGG + chr7_3:81611892-81611911 Msa1129630:CDS 55.0%
ATCGACATACACGCCGGTGA+CGG - chr7_3:81612135-81612154 None:intergenic 55.0%
CCAAGCCCTCGAATTCTTGG+AGG - chr7_3:81612788-81612807 None:intergenic 55.0%
CCTCCAAGAATTCGAGGGCT+TGG + chr7_3:81612785-81612804 Msa1129630:intron 55.0%
TGCACCTTCTGCTGCAGTGT+TGG + chr7_3:81613440-81613459 Msa1129630:CDS 55.0%
GTGTCCAACACTGCAGCAGA+AGG - chr7_3:81613447-81613466 None:intergenic 55.0%
TTGTCCACCGGAGAAGAAGG+TGG - chr7_3:81613474-81613493 None:intergenic 55.0%
ACCTCCCAGCCGAACTCACT+AGG + chr7_3:81611468-81611487 Msa1129630:intron 60.0%
CCTCCCAGCCGAACTCACTA+GGG + chr7_3:81611469-81611488 Msa1129630:intron 60.0%
GGCCCATTTGCCTTAGGAGC+TGG + chr7_3:81611490-81611509 Msa1129630:intron 60.0%
ACACGCAGTCCTCCTCACCT+AGG + chr7_3:81611543-81611562 Msa1129630:intron 60.0%
!! GAGCTTGTTGGTGCCGTCAC+CGG + chr7_3:81612119-81612138 Msa1129630:intron 60.0%
CACGACGCCACCTTCTTCTC+CGG + chr7_3:81613464-81613483 Msa1129630:CDS 60.0%
CCCTAGTGAGTTCGGCTGGG+AGG - chr7_3:81611472-81611491 None:intergenic 65.0%
GGGCCCTAGTGAGTTCGGCT+GGG - chr7_3:81611475-81611494 None:intergenic 65.0%
TGGGCCCTAGTGAGTTCGGC+TGG - chr7_3:81611476-81611495 None:intergenic 65.0%
GACGCCACCTTCTTCTCCGG+TGG + chr7_3:81613467-81613486 Msa1129630:CDS 65.0%
GGAGGAAAAGGGACGCCGCC+AGG - chr7_3:81611036-81611055 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 81608084 81613686 81608084 ID=Msa1129630;Name=Msa1129630
chr7_3 mRNA 81608084 81613686 81608084 ID=Msa1129630-mRNA-1;Parent=Msa1129630;Name=Msa1129630-mRNA-1;_AED=0.25;_eAED=0.28;_QI=537|1|0.87|1|0.71|0.62|8|0|462
chr7_3 exon 81608084 81608402 81608084 ID=Msa1129630-mRNA-1:exon:23837;Parent=Msa1129630-mRNA-1
chr7_3 exon 81609687 81609868 81609687 ID=Msa1129630-mRNA-1:exon:23838;Parent=Msa1129630-mRNA-1
chr7_3 exon 81610817 81611401 81610817 ID=Msa1129630-mRNA-1:exon:23839;Parent=Msa1129630-mRNA-1
chr7_3 exon 81611751 81611922 81611751 ID=Msa1129630-mRNA-1:exon:23840;Parent=Msa1129630-mRNA-1
chr7_3 exon 81612010 81612086 81612010 ID=Msa1129630-mRNA-1:exon:23841;Parent=Msa1129630-mRNA-1
chr7_3 exon 81612203 81612242 81612203 ID=Msa1129630-mRNA-1:exon:23842;Parent=Msa1129630-mRNA-1
chr7_3 exon 81613044 81613101 81613044 ID=Msa1129630-mRNA-1:exon:23843;Parent=Msa1129630-mRNA-1
chr7_3 exon 81613194 81613686 81613194 ID=Msa1129630-mRNA-1:exon:23844;Parent=Msa1129630-mRNA-1
chr7_3 five_prime_UTR 81608084 81608402 81608084 ID=Msa1129630-mRNA-1:five_prime_utr;Parent=Msa1129630-mRNA-1
chr7_3 five_prime_UTR 81609687 81609868 81609687 ID=Msa1129630-mRNA-1:five_prime_utr;Parent=Msa1129630-mRNA-1
chr7_3 five_prime_UTR 81610817 81610852 81610817 ID=Msa1129630-mRNA-1:five_prime_utr;Parent=Msa1129630-mRNA-1
chr7_3 CDS 81610853 81611401 81610853 ID=Msa1129630-mRNA-1:cds;Parent=Msa1129630-mRNA-1
chr7_3 CDS 81611751 81611922 81611751 ID=Msa1129630-mRNA-1:cds;Parent=Msa1129630-mRNA-1
chr7_3 CDS 81612010 81612086 81612010 ID=Msa1129630-mRNA-1:cds;Parent=Msa1129630-mRNA-1
chr7_3 CDS 81612203 81612242 81612203 ID=Msa1129630-mRNA-1:cds;Parent=Msa1129630-mRNA-1
chr7_3 CDS 81613044 81613101 81613044 ID=Msa1129630-mRNA-1:cds;Parent=Msa1129630-mRNA-1
chr7_3 CDS 81613194 81613686 81613194 ID=Msa1129630-mRNA-1:cds;Parent=Msa1129630-mRNA-1
Gene Sequence

>Msa1129630

ATGCCTTCTTCGTCTTCACCTGTTCTTCCCAGTCTTATGGAAAGCAATTATATGAAACCCCCGGATTCTTTTCATCGTTCACCTGTCAGGGGTCTGACAGCAAATCCTGCCTCATTGCAAGCTACATCATCGTATCCGATCAGAAGTGTTCGACCTGTGTTTTCAACCAATGATGAATGTCCTGGCGGCGTCCCTTTTCCTCCCGTTTCACAGCATGATAGGCAATATCAAGATTCTCCCTTCGCTTCTCAGGCATTAGGTGACAATGTGTCTTCGGAAATCCACTCAGCAACATTCACTTCTCACCTTCAAGAAAATGATGATATATCGTGGGGACCAGATCCATTGCCAGATATTCTTGGTTTTCCTGAAATTTTTTCTGTCCAGCATGATCAGGTGGAAAACAGTGCTTGTTACATGAATGAAGACAATGTCAAAAAAACTGATTTTGGGGAGTGGGTTGAACAACTAATGACAAGTGATGATTCTGTTAATCCAAATTGGAGTCAGCTTCTTGGTGATGACAATGTTGTTGAACCAACACAACAGGCGATGCAGGTTTCTCAGAAGCAGCATACACCATCTGGAGAAGTCAACAATCTTTGTAATCCAGCTTCAGCATCAGCATCAACTGCTTCTCAAACTAAGCCTAGAATGCGTTGGAGTCCAGAACTTCACGAAGCTTTTGTGGAAGCAGTCAACCAGCTTGGTGGTAGTGAGAAGGCTACTCCAAAAGGTGTCTTGAATCTAATGAATGTTGAGGGCCTTACCATCTACCATGTAAAAAGCCACCTCCAGAAGTATAGAACTGCCAGATACAAACCTGAGTCACCAGAAGAAACTTCTGAGAAAAAGATGAGTTCAATTGAGGAAATGAAATCTCTGGACTTGAAAACGAGTAAGGGAATCACTGAAGCATTACGGTTGCAGATGGAACTTCAGAAGCGACTTCATGAACAACTTGAGGTACATTATTGTTATTATCACCCGGAACTTCGAAGTTTTGGCATGTCTGATATTGTAATTGTTATACAGATTCAAAGGAAGTTGCAGATTCAAATTGAAAACCAAGGGAAACATCTTGAGATGATGTTTGAGAAACAGAAACAGATAGGTGACAACAAGAGCCCTTCCCCTTCAAATGCACCTTCTGCTGCAGTGTTGGACACGACGCCACCTTCTTCTCCGGTGGACAATTTAAAAACTTCAAAAGATGAACGGGATAAATCAGGATGTAACGCTGACATTCCTAAAGACATACCTGGAGAAAGTTCCCATGATGTAAGCAGAAAGCAAATGGCAGATGAAGCTGAAGTTACCAATGAACATGAGAGGGTAGATGATCAGTTTTCTGACGTGCCTCCAACAAAACGAGCGAAGATTCAATGA
Protein sequence

>Msa1129630

MPSSSSPVLPSLMESNYMKPPDSFHRSPVRGLTANPASLQATSSYPIRSVRPVFSTNDECPGGVPFPPVSQHDRQYQDSPFASQALGDNVSSEIHSATFTSHLQENDDISWGPDPLPDILGFPEIFSVQHDQVENSACYMNEDNVKKTDFGEWVEQLMTSDDSVNPNWSQLLGDDNVVEPTQQAMQVSQKQHTPSGEVNNLCNPASASASTASQTKPRMRWSPELHEAFVEAVNQLGGSEKATPKGVLNLMNVEGLTIYHVKSHLQKYRTARYKPESPEETSEKKMSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEVHYCYYHPELRSFGMSDIVIVIQIQRKLQIQIENQGKHLEMMFEKQKQIGDNKSPSPSNAPSAAVLDTTPPSSPVDNLKTSKDERDKSGCNADIPKDIPGESSHDVSRKQMADEAEVTNEHERVDDQFSDVPPTKRAKIQ*