Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130190 | XP_003626533.1 | 100.000 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 5.82e-176 | 493 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130190 | sp|Q9SP08|RRP41_ARATH | 80.579 | 242 | 45 | 2 | 1 | 241 | 1 | 241 | 2.43e-140 | 395 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130190 | G7L401 | 100.000 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 2.78e-176 | 493 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1130190 | Msa1461950 | 0.973093 | 7.558851e-136 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130190 | MtrunA17_Chr7g0275341 | 100.000 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 5.35e-180 | 493 |
| Msa1130190 | MtrunA17_Chr3g0114941 | 72.662 | 139 | 8 | 1 | 103 | 241 | 1 | 109 | 1.69e-61 | 188 |
| Msa1130190 | MtrunA17_Chr4g0028851 | 32.432 | 222 | 145 | 3 | 10 | 231 | 33 | 249 | 1.40e-30 | 114 |
| Msa1130190 | MtrunA17_Chr7g0247281 | 29.255 | 188 | 114 | 5 | 10 | 188 | 5 | 182 | 1.69e-19 | 84.3 |
| Msa1130190 | MtrunA17_Chr7g0254071 | 25.714 | 245 | 163 | 6 | 8 | 235 | 443 | 685 | 6.34e-13 | 67.8 |
| Msa1130190 | MtrunA17_Chr6g0449871 | 27.126 | 247 | 158 | 7 | 7 | 234 | 353 | 596 | 7.51e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130190 | AT3G61620.2 | 80.579 | 242 | 45 | 2 | 1 | 241 | 1 | 241 | 2.47e-141 | 395 |
| Msa1130190 | AT3G61620.1 | 80.579 | 242 | 45 | 2 | 1 | 241 | 1 | 241 | 2.47e-141 | 395 |
| Msa1130190 | AT4G27490.4 | 30.594 | 219 | 147 | 3 | 10 | 228 | 34 | 247 | 8.81e-27 | 104 |
| Msa1130190 | AT4G27490.3 | 30.594 | 219 | 147 | 3 | 10 | 228 | 34 | 247 | 8.81e-27 | 104 |
| Msa1130190 | AT4G27490.1 | 30.594 | 219 | 147 | 3 | 10 | 228 | 34 | 247 | 8.81e-27 | 104 |
| Msa1130190 | AT4G27490.7 | 30.392 | 204 | 137 | 3 | 25 | 228 | 7 | 205 | 9.71e-25 | 97.8 |
| Msa1130190 | AT4G27490.2 | 38.514 | 148 | 86 | 3 | 10 | 157 | 34 | 176 | 1.42e-24 | 97.1 |
| Msa1130190 | AT4G27490.5 | 38.514 | 148 | 86 | 3 | 10 | 157 | 34 | 176 | 1.42e-24 | 97.1 |
| Msa1130190 | AT4G27490.6 | 38.514 | 148 | 86 | 3 | 10 | 157 | 34 | 176 | 1.42e-24 | 97.1 |
| Msa1130190 | AT3G46210.1 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.22e-18 | 81.3 |
| Msa1130190 | AT3G46210.5 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.22e-18 | 81.3 |
| Msa1130190 | AT3G46210.7 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.22e-18 | 81.3 |
| Msa1130190 | AT3G46210.3 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.22e-18 | 81.3 |
| Msa1130190 | AT3G46210.6 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.22e-18 | 81.3 |
| Msa1130190 | AT3G46210.4 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.22e-18 | 81.3 |
| Msa1130190 | AT3G46210.2 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.22e-18 | 81.3 |
Find 95 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTCATTGCTGCTGTTTA+TGG | 0.176064 | 7_3:-82307375 | Msa1130190:CDS |
| CCAACTTTCCTTTGATTTAT+CGG | 0.216473 | 7_3:-82303433 | Msa1130190:three_prime_UTR |
| CCATCAGAGCGAAGTCCTTC+TGG | 0.228152 | 7_3:+82307673 | None:intergenic |
| TAAACTACCAATTGATATAT+TGG | 0.234288 | 7_3:-82304011 | Msa1130190:CDS |
| ATATATTTCAGGTGCAAAAT+AGG | 0.283714 | 7_3:-82307195 | Msa1130190:intron |
| TCGAATAACCAGAGAAATTT+CGG | 0.285988 | 7_3:+82305795 | None:intergenic |
| CTCCATCTGCTTGGAGAACT+TGG | 0.292775 | 7_3:+82305622 | None:intergenic |
| CAAAATTCTAATTCAAGCTT+TGG | 0.325359 | 7_3:+82303458 | None:intergenic |
| AGATAAAGTGACCCTTCTTC+AGG | 0.347749 | 7_3:-82305116 | Msa1130190:intron |
| GTTCTATTCATTTATAAAAC+AGG | 0.361890 | 7_3:+82308051 | None:intergenic |
| GAGCCTTGTCGCTCATTTGT+TGG | 0.363291 | 7_3:+82307170 | None:intergenic |
| CAACTTTCCTTTGATTTATC+GGG | 0.375307 | 7_3:-82303432 | Msa1130190:three_prime_UTR |
| TGAATAGAACGACAGCGATT+TGG | 0.378170 | 7_3:-82308038 | Msa1130190:five_prime_UTR |
| TTGTATAAATGCTGCAACTT+TGG | 0.382650 | 7_3:-82305422 | Msa1130190:CDS |
| ACTTTGGCCCTAGCTGATGC+TGG | 0.384721 | 7_3:-82305406 | Msa1130190:CDS |
| CCGATAAATCAAAGGAAAGT+TGG | 0.403826 | 7_3:+82303433 | None:intergenic |
| CATTGTTGTTATGAGTTCAA+TGG | 0.404286 | 7_3:+82303496 | None:intergenic |
| CTGTAATAGAACCTGGGAAC+GGG | 0.405803 | 7_3:+82305735 | None:intergenic |
| ATTGGAAAATGTTATGCAAC+TGG | 0.415824 | 7_3:-82303993 | Msa1130190:CDS |
| CGATAAATCAAAGGAAAGTT+GGG | 0.416618 | 7_3:+82303434 | None:intergenic |
| AGAACTAACCTGTCGCCCTT+TGG | 0.422174 | 7_3:+82306982 | None:intergenic |
| CTCTGATGGTCGCCGACCCA+TGG | 0.452782 | 7_3:-82307659 | Msa1130190:CDS |
| AGGGTCACTTTATCTAACTT+TGG | 0.454499 | 7_3:+82305124 | None:intergenic |
| ACATTTAATGCCCCGTTCCC+AGG | 0.456965 | 7_3:-82305746 | Msa1130190:intron |
| GGAGAAAATTTACCTGAAGA+AGG | 0.462062 | 7_3:+82305104 | None:intergenic |
| CTTGTAACTTCCTGTAGTGC+TGG | 0.463780 | 7_3:-82305367 | Msa1130190:CDS |
| GGCGGCTCACTGCAGTGCCA+AGG | 0.467354 | 7_3:+82307942 | None:intergenic |
| CGACAAATTCGAGCAGAGAT+TGG | 0.468538 | 7_3:-82307530 | Msa1130190:CDS |
| CAAGCAGAGGGGTGCTATTG+AGG | 0.468802 | 7_3:+82305341 | None:intergenic |
| CATCAGAGCGAAGTCCTTCT+GGG | 0.469663 | 7_3:+82307674 | None:intergenic |
| TGATTGTAAAGTACCTCTCT+AGG | 0.473493 | 7_3:+82307351 | None:intergenic |
| GGGAAACGGCAGTACTTCCA+TGG | 0.478515 | 7_3:+82307642 | None:intergenic |
| AAGTATCTACCCATCAGCTT+TGG | 0.481023 | 7_3:+82307499 | None:intergenic |
| GAGATCAACCGAAATTTCTC+TGG | 0.484302 | 7_3:-82305803 | Msa1130190:CDS |
| ACAAATGAGCGACAAGGCTC+TGG | 0.488464 | 7_3:-82307167 | Msa1130190:intron |
| AAATGTTATGCAACTGGCTA+CGG | 0.489876 | 7_3:-82303987 | Msa1130190:CDS |
| ATTGAGGTATCCAGCACTAC+AGG | 0.490303 | 7_3:+82305357 | None:intergenic |
| AACTATGTAGAAGACAGTGC+TGG | 0.505585 | 7_3:-82305175 | Msa1130190:CDS |
| CTCAATAGCACCCCTCTGCT+TGG | 0.505964 | 7_3:-82305340 | Msa1130190:intron |
| CCAGAAGGACTTCGCTCTGA+TGG | 0.509153 | 7_3:-82307673 | Msa1130190:CDS |
| TGTCAATATGCATTCTTCCA+TGG | 0.513511 | 7_3:+82305768 | None:intergenic |
| TGAGGAAACCAAAGGGCGAC+AGG | 0.514912 | 7_3:-82306990 | Msa1130190:intron |
| ATGAATTACCTCCATCTGCT+TGG | 0.515754 | 7_3:+82305613 | None:intergenic |
| CTTTGGCCCTAGCTGATGCT+GGG | 0.520390 | 7_3:-82305405 | Msa1130190:CDS |
| AGAATTCTATTGTTGGCATA+CGG | 0.520542 | 7_3:-82303619 | Msa1130190:three_prime_UTR |
| ATGGAGTACGTCAGCCCAGA+AGG | 0.521251 | 7_3:-82307688 | Msa1130190:CDS |
| GAGAAAATTTACCTGAAGAA+GGG | 0.526816 | 7_3:+82305105 | None:intergenic |
| GCGGCTCACTGCAGTGCCAA+GGG | 0.529025 | 7_3:+82307943 | None:intergenic |
| ATAAACAGCAGCAATGACTT+TGG | 0.529559 | 7_3:+82307377 | None:intergenic |
| ATACTATATAAAATTTCAGT+AGG | 0.533356 | 7_3:-82303379 | Msa1130190:three_prime_UTR |
| TAGGGATCCCAGCATCAGCT+AGG | 0.534689 | 7_3:+82305398 | None:intergenic |
| AGAATTCCTACAGTTACATC+AGG | 0.541883 | 7_3:+82305148 | None:intergenic |
| ACTGCAGTGCCAAGGGTGGT+CGG | 0.543700 | 7_3:+82307950 | None:intergenic |
| ACTATGTAGAAGACAGTGCT+GGG | 0.550161 | 7_3:-82305174 | Msa1130190:CDS |
| TGAAGCAAAGAACAGAGAGA+TGG | 0.552709 | 7_3:-82307707 | Msa1130190:intron |
| ACATATACATACCAAGCAGA+GGG | 0.554010 | 7_3:+82305329 | None:intergenic |
| CAAAGCAACTTGAGTATCGA+AGG | 0.554974 | 7_3:-82303816 | Msa1130190:CDS |
| TCAATGGTATCCTGAAAACT+AGG | 0.561204 | 7_3:+82303512 | None:intergenic |
| GGCACTGCAGTGAGCCGCCG+CGG | 0.562479 | 7_3:-82307938 | Msa1130190:five_prime_UTR |
| TCTGGTTATTCGACAAACCA+TGG | 0.564931 | 7_3:-82305785 | Msa1130190:CDS |
| GTCCAAGTTCTCCAAGCAGA+TGG | 0.566076 | 7_3:-82305624 | Msa1130190:CDS |
| GAAGTTACAAGATCAAGCAT+AGG | 0.570197 | 7_3:+82305379 | None:intergenic |
| TGCTGTTTATGGCCCTAGAG+AGG | 0.572655 | 7_3:-82307364 | Msa1130190:intron |
| AAGTTACAAGATCAAGCATA+GGG | 0.574925 | 7_3:+82305380 | None:intergenic |
| TTGGCATACGGTACTGACTC+AGG | 0.587032 | 7_3:-82303607 | Msa1130190:three_prime_UTR |
| ACAATGGTATCATGAAAACT+AGG | 0.588142 | 7_3:+82303543 | None:intergenic |
| GGTGCTGTATCCAAAGCTGA+TGG | 0.593433 | 7_3:-82307509 | Msa1130190:CDS |
| GCTCACTGCAGTGCCAAGGG+TGG | 0.594700 | 7_3:+82307946 | None:intergenic |
| GATTGTAAAGTACCTCTCTA+GGG | 0.598153 | 7_3:+82307352 | None:intergenic |
| TTTACAGCCCGATAAATCAA+AGG | 0.605581 | 7_3:+82303425 | None:intergenic |
| AGGGATCCCAGCATCAGCTA+GGG | 0.609353 | 7_3:+82305399 | None:intergenic |
| CATACGGTACTGACTCAGGC+AGG | 0.609391 | 7_3:-82303603 | Msa1130190:three_prime_UTR |
| TTAGCACTGGTGATCGCATG+AGG | 0.609477 | 7_3:-82307008 | Msa1130190:CDS |
| TGATCGCATGAGGAAACCAA+AGG | 0.616278 | 7_3:-82306998 | Msa1130190:CDS |
| GTTATGCAACTGGCTACGGA+AGG | 0.624056 | 7_3:-82303983 | Msa1130190:CDS |
| GATCGCATGAGGAAACCAAA+GGG | 0.624431 | 7_3:-82306997 | Msa1130190:CDS |
| AAAGCAACTTGAGTATCGAA+GGG | 0.626931 | 7_3:-82303815 | Msa1130190:CDS |
| TGTAATAGAACCTGGGAACG+GGG | 0.631568 | 7_3:+82305736 | None:intergenic |
| AACATATACATACCAAGCAG+AGG | 0.636947 | 7_3:+82305328 | None:intergenic |
| GGAAACGGCAGTACTTCCAT+GGG | 0.641941 | 7_3:+82307643 | None:intergenic |
| CAAGTTCTCCAAGCAGATGG+AGG | 0.646436 | 7_3:-82305621 | Msa1130190:intron |
| GCAGTGCCAAGGGTGGTCGG+CGG | 0.657585 | 7_3:+82307953 | None:intergenic |
| GATAAATCAAAGGAAAGTTG+GGG | 0.659887 | 7_3:+82303435 | None:intergenic |
| ACGGCAGTACTTCCATGGGT+CGG | 0.660183 | 7_3:+82307647 | None:intergenic |
| GTGCTGTATCCAAAGCTGAT+GGG | 0.661709 | 7_3:-82307508 | Msa1130190:intron |
| ACTGTAATAGAACCTGGGAA+CGG | 0.668397 | 7_3:+82305734 | None:intergenic |
| TATGTAGAAGACAGTGCTGG+GGG | 0.668530 | 7_3:-82305172 | Msa1130190:CDS |
| CTATGTAGAAGACAGTGCTG+GGG | 0.678097 | 7_3:-82305173 | Msa1130190:CDS |
| GGTTCGATGTGAATACAGCA+TGG | 0.680697 | 7_3:-82307037 | Msa1130190:CDS |
| GAGCCAACAAATGAGCGACA+AGG | 0.687086 | 7_3:-82307173 | Msa1130190:CDS |
| AAACTAGGTGACAACAACAA+TGG | 0.690637 | 7_3:+82303527 | None:intergenic |
| AGCAACAAACCTGTGCTCCG+CGG | 0.697456 | 7_3:+82307921 | None:intergenic |
| AACAAACCTGTGCTCCGCGG+CGG | 0.703853 | 7_3:+82307924 | None:intergenic |
| AAGCAACTTGAGTATCGAAG+GGG | 0.706304 | 7_3:-82303814 | Msa1130190:CDS |
| CATATACATACCAAGCAGAG+GGG | 0.742316 | 7_3:+82305330 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAAATTTATATATTTTCTA+TGG | - | chr7_3:82304108-82304127 | Msa1130190:intron | 10.0% |
| !! | TAAGTTATAATATAATACAT+TGG | - | chr7_3:82304270-82304289 | Msa1130190:intron | 10.0% |
| !! | AAGTTATAATATAATACATT+GGG | - | chr7_3:82304271-82304290 | Msa1130190:intron | 10.0% |
| !! | TTACAATGATTAAAAAAAAA+AGG | + | chr7_3:82305699-82305718 | None:intergenic | 10.0% |
| !!! | TTGTTTCTAATTTATGATTT+CGG | - | chr7_3:82303502-82303521 | Msa1130190:three_prime_UTR | 15.0% |
| !! | AATTAAAAGTGAATACAATA+AGG | - | chr7_3:82303593-82303612 | Msa1130190:three_prime_UTR | 15.0% |
| !! | ATTAAAAGTGAATACAATAA+GGG | - | chr7_3:82303594-82303613 | Msa1130190:three_prime_UTR | 15.0% |
| !! | TATAGAAGATACTATAAAAA+CGG | + | chr7_3:82304188-82304207 | None:intergenic | 15.0% |
| !!! | ATCAATTTTCCAATTTTTTT+CGG | - | chr7_3:82305417-82305436 | Msa1130190:CDS | 15.0% |
| !! | AATAAAATAACAAGATGAAA+AGG | + | chr7_3:82305836-82305855 | None:intergenic | 15.0% |
| !! | AAAAAAAATCTGTTAATTGT+TGG | - | chr7_3:82305880-82305899 | Msa1130190:intron | 15.0% |
| !! | GTTTAAAAAAGTAAAACAAA+AGG | + | chr7_3:82306754-82306773 | None:intergenic | 15.0% |
| !! | AAGAAAATAAAATATGTTGT+TGG | + | chr7_3:82306977-82306996 | None:intergenic | 15.0% |
| !!! | TTTTACTTTATTTTTGGATT+AGG | - | chr7_3:82307311-82307330 | Msa1130190:intron | 15.0% |
| !!! | TTTACTTTATTTTTGGATTA+GGG | - | chr7_3:82307312-82307331 | Msa1130190:intron | 15.0% |
| !!! | TTTTATTAGAATTCTATTGT+TGG | - | chr7_3:82307774-82307793 | Msa1130190:intron | 15.0% |
| !! | ATACTATATAAAATTTCAGT+AGG | - | chr7_3:82308021-82308040 | Msa1130190:five_prime_UTR | 15.0% |
| !! | GTTCTATTCATTTATAAAAC+AGG | + | chr7_3:82303352-82303371 | None:intergenic | 20.0% |
| !! | AATTGGAGAAAAGAAAAAAA+GGG | + | chr7_3:82303783-82303802 | None:intergenic | 20.0% |
| !! | ATATCAGAAAGAAAATGAAT+TGG | + | chr7_3:82303800-82303819 | None:intergenic | 20.0% |
| !! | TAGTATCTTCTATATATTTC+AGG | - | chr7_3:82304194-82304213 | Msa1130190:intron | 20.0% |
| !! | ACTATATCAATTAAGTATGA+AGG | + | chr7_3:82304487-82304506 | None:intergenic | 20.0% |
| !! | ATATATAAGAAACAAACAAG+AGG | + | chr7_3:82305551-82305570 | None:intergenic | 20.0% |
| !! | ATGATTAAAAAAAAAAGGTC+CGG | + | chr7_3:82305694-82305713 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTTTGCAATGATT+TGG | - | chr7_3:82305726-82305745 | Msa1130190:intron | 20.0% |
| !!! | GTATTTACCTTTTTTTATAG+AGG | - | chr7_3:82306452-82306471 | Msa1130190:intron | 20.0% |
| !!! | TTTTGATGAACATTATTGAT+AGG | - | chr7_3:82306826-82306845 | Msa1130190:intron | 20.0% |
| !! | TTTGATGAACATTATTGATA+GGG | - | chr7_3:82306827-82306846 | Msa1130190:intron | 20.0% |
| !! | TTAGAATATCAGTCTAAATT+CGG | + | chr7_3:82307024-82307043 | None:intergenic | 20.0% |
| !!! | ACTATAACATATTTTGTTGA+AGG | - | chr7_3:82307159-82307178 | Msa1130190:intron | 20.0% |
| !!! | TTACTTTATTTTTGGATTAG+GGG | - | chr7_3:82307313-82307332 | Msa1130190:intron | 20.0% |
| !!! | ATTTTGTTATTTACTGTAGA+TGG | - | chr7_3:82307362-82307381 | Msa1130190:intron | 20.0% |
| !! | TAAACTACCAATTGATATAT+TGG | - | chr7_3:82307389-82307408 | Msa1130190:CDS | 20.0% |
| !!! | ACATTTTCCAATATATCAAT+TGG | + | chr7_3:82307399-82307418 | None:intergenic | 20.0% |
| !! | TTGATATAGTAGTAAAAACA+TGG | - | chr7_3:82307496-82307515 | Msa1130190:intron | 20.0% |
| !! | GAAGTTCAATGTATGATTTT+TGG | - | chr7_3:82303549-82303568 | Msa1130190:three_prime_UTR | 25.0% |
| ! | TCAGAGAAAGAAAGAAAAAA+AGG | + | chr7_3:82303676-82303695 | None:intergenic | 25.0% |
| ! | ATTGGAGAAAAGAAAAAAAG+GGG | + | chr7_3:82303782-82303801 | None:intergenic | 25.0% |
| ! | GAATTGGAGAAAAGAAAAAA+AGG | + | chr7_3:82303784-82303803 | None:intergenic | 25.0% |
| ! | TAAAGAGGAGAAAAAAAAGA+TGG | + | chr7_3:82303836-82303855 | None:intergenic | 25.0% |
| !! | ATATATTTCAGGTGCAAAAT+AGG | - | chr7_3:82304205-82304224 | Msa1130190:intron | 25.0% |
| ! | TGGAAATATTAACGGTTTAT+TGG | - | chr7_3:82304956-82304975 | Msa1130190:intron | 25.0% |
| ! | ATTAACGGTTTATTGGAAAT+AGG | - | chr7_3:82304963-82304982 | Msa1130190:intron | 25.0% |
| ! | AAAAATCTACCTTATCTACA+AGG | + | chr7_3:82305093-82305112 | None:intergenic | 25.0% |
| !! | TTGTAGATAAGGTAGATTTT+TGG | - | chr7_3:82305092-82305111 | Msa1130190:intron | 25.0% |
| !! | TGTAGATAAGGTAGATTTTT+GGG | - | chr7_3:82305093-82305112 | Msa1130190:intron | 25.0% |
| ! | AGATAAGTTAACTAGTTACA+AGG | - | chr7_3:82305160-82305179 | Msa1130190:CDS | 25.0% |
| ! | GATAAGTTAACTAGTTACAA+GGG | - | chr7_3:82305161-82305180 | Msa1130190:CDS | 25.0% |
| ! | AGAGAAGTTAAGTAGTTTAA+AGG | - | chr7_3:82305212-82305231 | Msa1130190:intron | 25.0% |
| ! | GAGAAGTTAAGTAGTTTAAA+GGG | - | chr7_3:82305213-82305232 | Msa1130190:intron | 25.0% |
| ! | TCATTCAGAGTTTATTAGAT+TGG | - | chr7_3:82305485-82305504 | Msa1130190:intron | 25.0% |
| !! | TTGTTGGCAATATTTAAAAC+AGG | - | chr7_3:82305896-82305915 | Msa1130190:intron | 25.0% |
| !! | TTGGTATGTATATGTTTTAC+TGG | - | chr7_3:82306079-82306098 | Msa1130190:intron | 25.0% |
| !!! | GTTTTACTGGAAATTTTAAC+TGG | - | chr7_3:82306092-82306111 | Msa1130190:intron | 25.0% |
| ! | GTTTATATATGTTTGTAACC+TGG | - | chr7_3:82306365-82306384 | Msa1130190:intron | 25.0% |
| !! | TCTAAAGATGAGAACAATTT+TGG | + | chr7_3:82306567-82306586 | None:intergenic | 25.0% |
| ! | AATGTTCATCAAAAGCAAAA+TGG | + | chr7_3:82306788-82306807 | None:intergenic | 25.0% |
| ! | AAAATTACAATGAAAGAGAC+TGG | + | chr7_3:82307205-82307224 | None:intergenic | 25.0% |
| !!! | TGTGGCTTTTACTTTATTTT+TGG | - | chr7_3:82307305-82307324 | Msa1130190:intron | 25.0% |
| ! | TGTCAATCAATGAAGAAATT+AGG | + | chr7_3:82307547-82307566 | None:intergenic | 25.0% |
| ! | TAACATGAAATAAACCAACA+TGG | + | chr7_3:82307654-82307673 | None:intergenic | 25.0% |
| ! | CAAAATTCTAATTCAAGCTT+TGG | + | chr7_3:82307945-82307964 | None:intergenic | 25.0% |
| AAAAGAAAAAAAGGGGGAAA+CGG | + | chr7_3:82303775-82303794 | None:intergenic | 30.0% | |
| TTGGAGAAAAGAAAAAAAGG+GGG | + | chr7_3:82303781-82303800 | None:intergenic | 30.0% | |
| CACAGTGAAAAAGAAGTTTA+AGG | + | chr7_3:82303970-82303989 | None:intergenic | 30.0% | |
| ! | TTTTTCTTCTTTCCATGTCT+AGG | - | chr7_3:82304342-82304361 | Msa1130190:intron | 30.0% |
| ! | TATAGTATTGCTGTACTGAT+AGG | - | chr7_3:82304501-82304520 | Msa1130190:intron | 30.0% |
| AGGAATTAAACTACGATAAG+AGG | - | chr7_3:82304609-82304628 | Msa1130190:intron | 30.0% | |
| ATAGAGTAGCATATTAAGAG+AGG | - | chr7_3:82304756-82304775 | Msa1130190:intron | 30.0% | |
| AGCTTAGCTGGAAATATTAA+CGG | - | chr7_3:82304948-82304967 | Msa1130190:intron | 30.0% | |
| ! | GTAGATAAGGTAGATTTTTG+GGG | - | chr7_3:82305094-82305113 | Msa1130190:intron | 30.0% |
| TTAAAGGGATATGTACGTAT+AGG | - | chr7_3:82305228-82305247 | Msa1130190:intron | 30.0% | |
| TAAAGGGATATGTACGTATA+GGG | - | chr7_3:82305229-82305248 | Msa1130190:intron | 30.0% | |
| AATACAACAAACACGTGTAT+TGG | + | chr7_3:82305288-82305307 | None:intergenic | 30.0% | |
| CTGAATGACAAACAAAATGA+GGG | + | chr7_3:82305473-82305492 | None:intergenic | 30.0% | |
| TCTGAATGACAAACAAAATG+AGG | + | chr7_3:82305474-82305493 | None:intergenic | 30.0% | |
| TCGAATAACCAGAGAAATTT+CGG | + | chr7_3:82305608-82305627 | None:intergenic | 30.0% | |
| TTGTATAAATGCTGCAACTT+TGG | - | chr7_3:82305978-82305997 | Msa1130190:intron | 30.0% | |
| AAGTTACAAGATCAAGCATA+GGG | + | chr7_3:82306023-82306042 | None:intergenic | 30.0% | |
| GCAATAATGAACTTTCGATT+TGG | - | chr7_3:82306146-82306165 | Msa1130190:intron | 30.0% | |
| GAGAAAATTTACCTGAAGAA+GGG | + | chr7_3:82306298-82306317 | None:intergenic | 30.0% | |
| GTCAGGAAAGTAAATTAACT+TGG | - | chr7_3:82306333-82306352 | Msa1130190:intron | 30.0% | |
| CCTAAAGCCTCTATAAAAAA+AGG | + | chr7_3:82306462-82306481 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTTATAGAGGCTTT+AGG | - | chr7_3:82306459-82306478 | Msa1130190:intron | 30.0% |
| ! | AAGATGAGAACAATTTTGGA+AGG | + | chr7_3:82306563-82306582 | None:intergenic | 30.0% |
| TGCACTATAGAGGAAAAAAT+AGG | - | chr7_3:82306623-82306642 | Msa1130190:intron | 30.0% | |
| AAACAACCACTGGATAATAA+AGG | + | chr7_3:82306862-82306881 | None:intergenic | 30.0% | |
| TTTATTATCCAGTGGTTGTT+TGG | - | chr7_3:82306861-82306880 | Msa1130190:intron | 30.0% | |
| TCTTAAGAATGAGTCAACAA+GGG | + | chr7_3:82306930-82306949 | None:intergenic | 30.0% | |
| ATCTTAAGAATGAGTCAACA+AGG | + | chr7_3:82306931-82306950 | None:intergenic | 30.0% | |
| AAGCATATAGTTTGATTGAG+CGG | - | chr7_3:82307270-82307289 | Msa1130190:intron | 30.0% | |
| ATTGGAAAATGTTATGCAAC+TGG | - | chr7_3:82307407-82307426 | Msa1130190:intron | 30.0% | |
| !! | CATTGATTGACAGATTTTAC+TGG | - | chr7_3:82307555-82307574 | Msa1130190:intron | 30.0% |
| AACATGGAATGCAAACAAAA+AGG | + | chr7_3:82307638-82307657 | None:intergenic | 30.0% | |
| !! | TTTTTGTTTGCATTCCATGT+TGG | - | chr7_3:82307637-82307656 | Msa1130190:intron | 30.0% |
| AGAATTCTATTGTTGGCATA+CGG | - | chr7_3:82307781-82307800 | Msa1130190:intron | 30.0% | |
| ACAATGGTATCATGAAAACT+AGG | + | chr7_3:82307860-82307879 | None:intergenic | 30.0% | |
| ! | CATTGTTGTTATGAGTTCAA+TGG | + | chr7_3:82307907-82307926 | None:intergenic | 30.0% |
| GATAAATCAAAGGAAAGTTG+GGG | + | chr7_3:82307968-82307987 | None:intergenic | 30.0% | |
| CGATAAATCAAAGGAAAGTT+GGG | + | chr7_3:82307969-82307988 | None:intergenic | 30.0% | |
| ! | CCAACTTTCCTTTGATTTAT+CGG | - | chr7_3:82307967-82307986 | Msa1130190:five_prime_UTR | 30.0% |
| ! | CAACTTTCCTTTGATTTATC+GGG | - | chr7_3:82307968-82307987 | Msa1130190:five_prime_UTR | 30.0% |
| !!! | AGAATCTTGCGCAAGTTTTT+TGG | + | chr7_3:82303393-82303412 | None:intergenic | 35.0% |
| TTAGCTTATCTACTCGCATA+AGG | - | chr7_3:82303638-82303657 | Msa1130190:three_prime_UTR | 35.0% | |
| TAGCTTATCTACTCGCATAA+GGG | - | chr7_3:82303639-82303658 | Msa1130190:three_prime_UTR | 35.0% | |
| ! | GAAGTTTAAGGTGAAATGCA+TGG | + | chr7_3:82303958-82303977 | None:intergenic | 35.0% |
| ATAAACAGCAGCAATGACTT+TGG | + | chr7_3:82304026-82304045 | None:intergenic | 35.0% | |
| ! | AAAGTCATTGCTGCTGTTTA+TGG | - | chr7_3:82304025-82304044 | Msa1130190:intron | 35.0% |
| ! | GATTGTAAAGTACCTCTCTA+GGG | + | chr7_3:82304051-82304070 | None:intergenic | 35.0% |
| ! | TGATTGTAAAGTACCTCTCT+AGG | + | chr7_3:82304052-82304071 | None:intergenic | 35.0% |
| AAGTATGAAGGATCAAGATC+AGG | + | chr7_3:82304475-82304494 | None:intergenic | 35.0% | |
| TCGTGATGAAATGTAAATGC+TGG | - | chr7_3:82304712-82304731 | Msa1130190:intron | 35.0% | |
| TAGCATATTAAGAGAGGCAA+TGG | - | chr7_3:82304762-82304781 | Msa1130190:intron | 35.0% | |
| TAGAAAAGTCTCTAGTTGAG+CGG | - | chr7_3:82304913-82304932 | Msa1130190:intron | 35.0% | |
| AAAGTTCCTTCAAAATCAGC+TGG | + | chr7_3:82305027-82305046 | None:intergenic | 35.0% | |
| ! | AGGAACTTTTAGCAGAAACA+TGG | - | chr7_3:82305038-82305057 | Msa1130190:intron | 35.0% |
| ATACACGAACCTTGTAGATA+AGG | - | chr7_3:82305081-82305100 | Msa1130190:intron | 35.0% | |
| AAAGGGATATGTACGTATAG+GGG | - | chr7_3:82305230-82305249 | Msa1130190:intron | 35.0% | |
| !! | CGTGTTTGTTGTATTGTGAA+AGG | - | chr7_3:82305293-82305312 | Msa1130190:intron | 35.0% |
| GTTGTATTGTGAAAGGACAA+AGG | - | chr7_3:82305300-82305319 | Msa1130190:intron | 35.0% | |
| GAGATAAGATTCGCTTCTAA+TGG | + | chr7_3:82305344-82305363 | None:intergenic | 35.0% | |
| !! | CATTGAGCACCGAAAAAAAT+TGG | + | chr7_3:82305429-82305448 | None:intergenic | 35.0% |
| ! | TTAGATTGGTTGTTCTTGCA+AGG | - | chr7_3:82305499-82305518 | Msa1130190:intron | 35.0% |
| ! | TTGAAATTTGCTCATGCTAC+AGG | - | chr7_3:82305575-82305594 | Msa1130190:intron | 35.0% |
| TGTCAATATGCATTCTTCCA+TGG | + | chr7_3:82305635-82305654 | None:intergenic | 35.0% | |
| ! | GTTCATAACATGCCTTTTGT+AGG | - | chr7_3:82305943-82305962 | Msa1130190:intron | 35.0% |
| GAAGTTACAAGATCAAGCAT+AGG | + | chr7_3:82306024-82306043 | None:intergenic | 35.0% | |
| ACATATACATACCAAGCAGA+GGG | + | chr7_3:82306074-82306093 | None:intergenic | 35.0% | |
| AACATATACATACCAAGCAG+AGG | + | chr7_3:82306075-82306094 | None:intergenic | 35.0% | |
| TGAAAGTTGCTGAATGAGTA+TGG | - | chr7_3:82306193-82306212 | Msa1130190:intron | 35.0% | |
| AGAATTCCTACAGTTACATC+AGG | + | chr7_3:82306255-82306274 | None:intergenic | 35.0% | |
| ! | AGGGTCACTTTATCTAACTT+TGG | + | chr7_3:82306279-82306298 | None:intergenic | 35.0% |
| GGAGAAAATTTACCTGAAGA+AGG | + | chr7_3:82306299-82306318 | None:intergenic | 35.0% | |
| TCCATATTTGTGTTGTAGTC+AGG | - | chr7_3:82306316-82306335 | Msa1130190:intron | 35.0% | |
| TCCTGACTACAACACAAATA+TGG | + | chr7_3:82306320-82306339 | None:intergenic | 35.0% | |
| GTTTATTATGTCCTTACTGC+AGG | - | chr7_3:82306430-82306449 | Msa1130190:intron | 35.0% | |
| AAAGGTAAATACCTGCAGTA+AGG | + | chr7_3:82306444-82306463 | None:intergenic | 35.0% | |
| !! | TGAGAACAATTTTGGAAGGA+GGG | + | chr7_3:82306559-82306578 | None:intergenic | 35.0% |
| !! | ATGAGAACAATTTTGGAAGG+AGG | + | chr7_3:82306560-82306579 | None:intergenic | 35.0% |
| AGGAGTCAAATCAATACTCT+AGG | + | chr7_3:82306590-82306609 | None:intergenic | 35.0% | |
| ATAGTCCTGTTAGAAAGTCA+AGG | - | chr7_3:82306650-82306669 | Msa1130190:intron | 35.0% | |
| ATAACTCCATAATACCCCTA+TGG | - | chr7_3:82306696-82306715 | Msa1130190:intron | 35.0% | |
| AAAGTAAAACAAAAGGTCCC+CGG | + | chr7_3:82306747-82306766 | None:intergenic | 35.0% | |
| GTTCATCAAAAGCAAAATGG+AGG | + | chr7_3:82306785-82306804 | None:intergenic | 35.0% | |
| CTTGAACCTTTATTATCCAG+TGG | - | chr7_3:82306853-82306872 | Msa1130190:intron | 35.0% | |
| AGTTTACATCAGCTAATGCT+CGG | - | chr7_3:82306884-82306903 | Msa1130190:intron | 35.0% | |
| AATATACAAAGCCGCTATAG+CGG | - | chr7_3:82307052-82307071 | Msa1130190:intron | 35.0% | |
| TCTTGCATACAAACTAGTTG+CGG | - | chr7_3:82307226-82307245 | Msa1130190:intron | 35.0% | |
| CGGTGTTTCATAACTTAGAA+TGG | - | chr7_3:82307246-82307265 | Msa1130190:intron | 35.0% | |
| AAATGTTATGCAACTGGCTA+CGG | - | chr7_3:82307413-82307432 | Msa1130190:intron | 35.0% | |
| !! | AAAGCAACTTGAGTATCGAA+GGG | - | chr7_3:82307585-82307604 | Msa1130190:intron | 35.0% |
| ATACATATGACCTGATGCTA+TGG | - | chr7_3:82307673-82307692 | Msa1130190:CDS | 35.0% | |
| AAAATAAGAACCTGCAGTTC+AGG | + | chr7_3:82307725-82307744 | None:intergenic | 35.0% | |
| AAACTAGGTGACAACAACAA+TGG | + | chr7_3:82307876-82307895 | None:intergenic | 35.0% | |
| TCAATGGTATCCTGAAAACT+AGG | + | chr7_3:82307891-82307910 | None:intergenic | 35.0% | |
| CCGATAAATCAAAGGAAAGT+TGG | + | chr7_3:82307970-82307989 | None:intergenic | 35.0% | |
| TTTACAGCCCGATAAATCAA+AGG | + | chr7_3:82307978-82307997 | None:intergenic | 35.0% | |
| TGAATAGAACGACAGCGATT+TGG | - | chr7_3:82303362-82303381 | Msa1130190:three_prime_UTR | 40.0% | |
| !!! | TTTTTGGTTTCATGCTCGCA+TGG | - | chr7_3:82303565-82303584 | Msa1130190:three_prime_UTR | 40.0% |
| TGAAGCAAAGAACAGAGAGA+TGG | - | chr7_3:82303693-82303712 | Msa1130190:intron | 40.0% | |
| ! | GCATCTAGGATTGCATAAAG+AGG | + | chr7_3:82303851-82303870 | None:intergenic | 40.0% |
| AAGTATCTACCCATCAGCTT+TGG | + | chr7_3:82303904-82303923 | None:intergenic | 40.0% | |
| !! | AGCTCTGCAATTTTCGAGAT+GGG | - | chr7_3:82303995-82304014 | Msa1130190:CDS | 40.0% |
| ATTCACATCGAACCTAGACA+TGG | + | chr7_3:82304357-82304376 | None:intergenic | 40.0% | |
| !! | AGCATGGCTAATTTTAGCAC+TGG | - | chr7_3:82304379-82304398 | Msa1130190:intron | 40.0% |
| CAAGATCAGGCAAAAAGACT+GGG | + | chr7_3:82304462-82304481 | None:intergenic | 40.0% | |
| TCAAGATCAGGCAAAAAGAC+TGG | + | chr7_3:82304463-82304482 | None:intergenic | 40.0% | |
| ! | TTCCATCTTTTTGCACACGT+AGG | - | chr7_3:82304589-82304608 | Msa1130190:intron | 40.0% |
| TTCCTACGTGTGCAAAAAGA+TGG | + | chr7_3:82304594-82304613 | None:intergenic | 40.0% | |
| ! | ATTACGTGTTCCTTTTCTGC+TGG | - | chr7_3:82304664-82304683 | Msa1130190:intron | 40.0% |
| ! | TTACGTGTTCCTTTTCTGCT+GGG | - | chr7_3:82304665-82304684 | Msa1130190:intron | 40.0% |
| ACAAAATACCCCAGCAGAAA+AGG | + | chr7_3:82304677-82304696 | None:intergenic | 40.0% | |
| !! | TTCTGCTGGGGTATTTTGTA+AGG | - | chr7_3:82304678-82304697 | Msa1130190:intron | 40.0% |
| ! | ACGTAAAGCCTTATCTGTCA+AGG | - | chr7_3:82304806-82304825 | Msa1130190:intron | 40.0% |
| AGTTGGATCCTTGACAGATA+AGG | + | chr7_3:82304817-82304836 | None:intergenic | 40.0% | |
| CTCAATAACATGAGCTTAGC+TGG | - | chr7_3:82304936-82304955 | Msa1130190:intron | 40.0% | |
| CGGTTTATTGGAAATAGGCA+TGG | - | chr7_3:82304968-82304987 | Msa1130190:intron | 40.0% | |
| ! | TGAATTCTGAGAACCTTACC+AGG | - | chr7_3:82304999-82305018 | Msa1130190:intron | 40.0% |
| ! | GAATTCTGAGAACCTTACCA+GGG | - | chr7_3:82305000-82305019 | Msa1130190:intron | 40.0% |
| !! | TAAGGTAGATTTTTGGGGAG+TGG | - | chr7_3:82305099-82305118 | Msa1130190:intron | 40.0% |
| !! | TTTTGGGGAGTGGTATTGTT+AGG | - | chr7_3:82305109-82305128 | Msa1130190:intron | 40.0% |
| ATGTACGTATAGGGGACATA+AGG | - | chr7_3:82305238-82305257 | Msa1130190:intron | 40.0% | |
| GAGATCAACCGAAATTTCTC+TGG | - | chr7_3:82305597-82305616 | Msa1130190:intron | 40.0% | |
| TCTGGTTATTCGACAAACCA+TGG | - | chr7_3:82305615-82305634 | Msa1130190:intron | 40.0% | |
| ACTGTAATAGAACCTGGGAA+CGG | + | chr7_3:82305669-82305688 | None:intergenic | 40.0% | |
| ATGAATTACCTCCATCTGCT+TGG | + | chr7_3:82305790-82305809 | None:intergenic | 40.0% | |
| AGGTAATTCATGCCTGATAG+TGG | - | chr7_3:82305799-82305818 | Msa1130190:CDS | 40.0% | |
| GGTAATTCATGCCTGATAGT+GGG | - | chr7_3:82305800-82305819 | Msa1130190:CDS | 40.0% | |
| ! | ACATGCCTTTTGTAGGAACT+AGG | - | chr7_3:82305950-82305969 | Msa1130190:intron | 40.0% |
| CATATACATACCAAGCAGAG+GGG | + | chr7_3:82306073-82306092 | None:intergenic | 40.0% | |
| !! | ACTTTCGATTTGGTACTGCA+TGG | - | chr7_3:82306156-82306175 | Msa1130190:intron | 40.0% |
| AACTATGTAGAAGACAGTGC+TGG | - | chr7_3:82306225-82306244 | Msa1130190:intron | 40.0% | |
| ACTATGTAGAAGACAGTGCT+GGG | - | chr7_3:82306226-82306245 | Msa1130190:intron | 40.0% | |
| AGATAAAGTGACCCTTCTTC+AGG | - | chr7_3:82306284-82306303 | Msa1130190:intron | 40.0% | |
| TATGTTTGTAACCTGGTCCT+AGG | - | chr7_3:82306372-82306391 | Msa1130190:intron | 40.0% | |
| CACTACACAATCCATAACCT+AGG | + | chr7_3:82306392-82306411 | None:intergenic | 40.0% | |
| GGCAATTAGCAGTCACATAA+AGG | - | chr7_3:82306517-82306536 | Msa1130190:intron | 40.0% | |
| TAGTGCAGTTCTCACTTCAT+AGG | + | chr7_3:82306610-82306629 | None:intergenic | 40.0% | |
| AAGTGAGAACTGCACTATAG+AGG | - | chr7_3:82306613-82306632 | Msa1130190:intron | 40.0% | |
| GTATGCCTTGACTTTCTAAC+AGG | + | chr7_3:82306658-82306677 | None:intergenic | 40.0% | |
| !! | GCATTTCCATAGGGGTATTA+TGG | + | chr7_3:82306705-82306724 | None:intergenic | 40.0% |
| CAAAAGCAAAATGGAGGTCT+AGG | + | chr7_3:82306779-82306798 | None:intergenic | 40.0% | |
| TGTAAACTCCAAACAACCAC+TGG | + | chr7_3:82306872-82306891 | None:intergenic | 40.0% | |
| !! | CAAAGCAACTTGAGTATCGA+AGG | - | chr7_3:82307584-82307603 | Msa1130190:intron | 40.0% |
| !! | AAGCAACTTGAGTATCGAAG+GGG | - | chr7_3:82307586-82307605 | Msa1130190:intron | 40.0% |
| TCGTATATTTCCTGAACTGC+AGG | - | chr7_3:82307712-82307731 | Msa1130190:intron | 40.0% | |
| !! | GTTGTTGTCACCTAGTTTTC+AGG | - | chr7_3:82307878-82307897 | Msa1130190:intron | 40.0% |
| TGCTCGAATTTGTCGCATCT+AGG | + | chr7_3:82303865-82303884 | None:intergenic | 45.0% | |
| CGACAAATTCGAGCAGAGAT+TGG | - | chr7_3:82303870-82303889 | Msa1130190:intron | 45.0% | |
| GTGCTGTATCCAAAGCTGAT+GGG | - | chr7_3:82303892-82303911 | Msa1130190:intron | 45.0% | |
| CATCTCGAAAATTGCAGAGC+TGG | + | chr7_3:82303996-82304015 | None:intergenic | 45.0% | |
| !! | CAGCTCTGCAATTTTCGAGA+TGG | - | chr7_3:82303994-82304013 | Msa1130190:CDS | 45.0% |
| GGTTCGATGTGAATACAGCA+TGG | - | chr7_3:82304363-82304382 | Msa1130190:intron | 45.0% | |
| TGATCGCATGAGGAAACCAA+AGG | - | chr7_3:82304402-82304421 | Msa1130190:intron | 45.0% | |
| GATCGCATGAGGAAACCAAA+GGG | - | chr7_3:82304403-82304422 | Msa1130190:intron | 45.0% | |
| !! | CGATAAGAGGTGTCTGAAGT+AGG | - | chr7_3:82304622-82304641 | Msa1130190:intron | 45.0% |
| ! | TACGTGTTCCTTTTCTGCTG+GGG | - | chr7_3:82304666-82304685 | Msa1130190:intron | 45.0% |
| !! | CTGGGGTATTTTGTAAGGCT+TGG | - | chr7_3:82304683-82304702 | Msa1130190:intron | 45.0% |
| GATCCAACTCCAAAAAACCC+TGG | - | chr7_3:82304828-82304847 | Msa1130190:intron | 45.0% | |
| !!! | TTGCCAGGGTTTTTTGGAGT+TGG | + | chr7_3:82304834-82304853 | None:intergenic | 45.0% |
| !!! | CTTTGGTTGCCAGGGTTTTT+TGG | + | chr7_3:82304840-82304859 | None:intergenic | 45.0% |
| AAGCAAGGTTAGCAGCACTT+TGG | + | chr7_3:82304857-82304876 | None:intergenic | 45.0% | |
| TGCTAACCTTGCTTGTGTGA+CGG | - | chr7_3:82304863-82304882 | Msa1130190:intron | 45.0% | |
| AATAACCCGTCACACAAGCA+AGG | + | chr7_3:82304872-82304891 | None:intergenic | 45.0% | |
| !! | GCTTGTGTGACGGGTTATTA+TGG | - | chr7_3:82304873-82304892 | Msa1130190:intron | 45.0% |
| ! | CTTTTAGCAGAAACATGGCG+AGG | - | chr7_3:82305043-82305062 | Msa1130190:intron | 45.0% |
| ACGTATAGGGGACATAAGGA+TGG | - | chr7_3:82305242-82305261 | Msa1130190:intron | 45.0% | |
| CGTATAGGGGACATAAGGAT+GGG | - | chr7_3:82305243-82305262 | Msa1130190:intron | 45.0% | |
| ACATAAGGATGGGAAAGGGA+TGG | - | chr7_3:82305253-82305272 | Msa1130190:intron | 45.0% | |
| CATAAGGATGGGAAAGGGAT+GGG | - | chr7_3:82305254-82305273 | Msa1130190:intron | 45.0% | |
| TGCAAGGTTCCATAACCCTT+TGG | - | chr7_3:82305515-82305534 | Msa1130190:intron | 45.0% | |
| GTTCCATAACCCTTTGGCAT+GGG | - | chr7_3:82305521-82305540 | Msa1130190:intron | 45.0% | |
| TGTAATAGAACCTGGGAACG+GGG | + | chr7_3:82305667-82305686 | None:intergenic | 45.0% | |
| CTGTAATAGAACCTGGGAAC+GGG | + | chr7_3:82305668-82305687 | None:intergenic | 45.0% | |
| CGGAGACTGTAATAGAACCT+GGG | + | chr7_3:82305674-82305693 | None:intergenic | 45.0% | |
| CCAGGTTCTATTACAGTCTC+CGG | - | chr7_3:82305672-82305691 | Msa1130190:intron | 45.0% | |
| GATCACAAGATCCCACTATC+AGG | + | chr7_3:82305814-82305833 | None:intergenic | 45.0% | |
| GCAGACCTAGTTCCTACAAA+AGG | + | chr7_3:82305958-82305977 | None:intergenic | 45.0% | |
| CTTGTAACTTCCTGTAGTGC+TGG | - | chr7_3:82306033-82306052 | Msa1130190:intron | 45.0% | |
| ! | ATTGAGGTATCCAGCACTAC+AGG | + | chr7_3:82306046-82306065 | None:intergenic | 45.0% |
| CTATGTAGAAGACAGTGCTG+GGG | - | chr7_3:82306227-82306246 | Msa1130190:intron | 45.0% | |
| ! | TATGTAGAAGACAGTGCTGG+GGG | - | chr7_3:82306228-82306247 | Msa1130190:intron | 45.0% |
| TGTAACCTGGTCCTAGGTTA+TGG | - | chr7_3:82306378-82306397 | Msa1130190:intron | 45.0% | |
| ACAATCCATAACCTAGGACC+AGG | + | chr7_3:82306386-82306405 | None:intergenic | 45.0% | |
| TGACAGAGAGCAAGAGAGAT+AGG | + | chr7_3:82306495-82306514 | None:intergenic | 45.0% | |
| TCTCTCTTGCTCTCTGTCAT+TGG | - | chr7_3:82306496-82306515 | Msa1130190:intron | 45.0% | |
| !! | ACAATTTTGGAAGGAGGGAC+AGG | + | chr7_3:82306554-82306573 | None:intergenic | 45.0% |
| !! | GCACACTCTGAAGTCAATAG+AGG | + | chr7_3:82307078-82307097 | None:intergenic | 45.0% |
| CATATGACCTGATGCTATGG+TGG | - | chr7_3:82307676-82307695 | Msa1130190:CDS | 45.0% | |
| ACTCAGGCAGGAAAAAGTAG+AGG | - | chr7_3:82307809-82307828 | Msa1130190:intron | 45.0% | |
| !!! | TAAATTTATATATTTTCTAT+GGG | - | chr7_3:82304109-82304128 | Msa1130190:intron | 5.0% |
| !!! | TTTTATTTTAATAATGATAT+AGG | + | chr7_3:82305366-82305385 | None:intergenic | 5.0% |
| CATCAGAGCGAAGTCCTTCT+GGG | + | chr7_3:82303729-82303748 | None:intergenic | 50.0% | |
| GGAAACGGCAGTACTTCCAT+GGG | + | chr7_3:82303760-82303779 | None:intergenic | 50.0% | |
| ! | GGTGCTGTATCCAAAGCTGA+TGG | - | chr7_3:82303891-82303910 | Msa1130190:intron | 50.0% |
| ! | TGCTGTTTATGGCCCTAGAG+AGG | - | chr7_3:82304036-82304055 | Msa1130190:intron | 50.0% |
| GAGCCAACAAATGAGCGACA+AGG | - | chr7_3:82304227-82304246 | Msa1130190:intron | 50.0% | |
| ! | GAGCCTTGTCGCTCATTTGT+TGG | + | chr7_3:82304233-82304252 | None:intergenic | 50.0% |
| ACAAATGAGCGACAAGGCTC+TGG | - | chr7_3:82304233-82304252 | Msa1130190:intron | 50.0% | |
| !! | TTAGCACTGGTGATCGCATG+AGG | - | chr7_3:82304392-82304411 | Msa1130190:intron | 50.0% |
| AGAACTAACCTGTCGCCCTT+TGG | + | chr7_3:82304421-82304440 | None:intergenic | 50.0% | |
| !! | AGAGGTGTCTGAAGTAGGTG+TGG | - | chr7_3:82304627-82304646 | Msa1130190:intron | 50.0% |
| TAGCAGCACTTTGGTTGCCA+GGG | + | chr7_3:82304848-82304867 | None:intergenic | 50.0% | |
| TTAGCAGCACTTTGGTTGCC+AGG | + | chr7_3:82304849-82304868 | None:intergenic | 50.0% | |
| GCTAACCTTGCTTGTGTGAC+GGG | - | chr7_3:82304864-82304883 | Msa1130190:intron | 50.0% | |
| AAATCAGCTGGTCCCTGGTA+AGG | + | chr7_3:82305015-82305034 | None:intergenic | 50.0% | |
| CTTCAAAATCAGCTGGTCCC+TGG | + | chr7_3:82305020-82305039 | None:intergenic | 50.0% | |
| !! | CAGGGACCAGCTGATTTTGA+AGG | - | chr7_3:82305018-82305037 | Msa1130190:intron | 50.0% |
| ATGGCGAGGAGATGATCTGT+TGG | - | chr7_3:82305057-82305076 | Msa1130190:intron | 50.0% | |
| AGGGGACATAAGGATGGGAA+AGG | - | chr7_3:82305248-82305267 | Msa1130190:intron | 50.0% | |
| GGGGACATAAGGATGGGAAA+GGG | - | chr7_3:82305249-82305268 | Msa1130190:intron | 50.0% | |
| GGTTCCATAACCCTTTGGCA+TGG | - | chr7_3:82305520-82305539 | Msa1130190:intron | 50.0% | |
| TGTCCCATGCCAAAGGGTTA+TGG | + | chr7_3:82305527-82305546 | None:intergenic | 50.0% | |
| AGAGGTTGTCCCATGCCAAA+GGG | + | chr7_3:82305533-82305552 | None:intergenic | 50.0% | |
| AAGAGGTTGTCCCATGCCAA+AGG | + | chr7_3:82305534-82305553 | None:intergenic | 50.0% | |
| ACATTTAATGCCCCGTTCCC+AGG | - | chr7_3:82305654-82305673 | Msa1130190:intron | 50.0% | |
| CCGGAGACTGTAATAGAACC+TGG | + | chr7_3:82305675-82305694 | None:intergenic | 50.0% | |
| GTCCAAGTTCTCCAAGCAGA+TGG | - | chr7_3:82305776-82305795 | Msa1130190:CDS | 50.0% | |
| CTCCATCTGCTTGGAGAACT+TGG | + | chr7_3:82305781-82305800 | None:intergenic | 50.0% | |
| CAAGTTCTCCAAGCAGATGG+AGG | - | chr7_3:82305779-82305798 | Msa1130190:CDS | 50.0% | |
| TGAGGGACGCATTTCCATAG+GGG | + | chr7_3:82306713-82306732 | None:intergenic | 50.0% | |
| GTGAGGGACGCATTTCCATA+GGG | + | chr7_3:82306714-82306733 | None:intergenic | 50.0% | |
| AGTGAGGGACGCATTTCCAT+AGG | + | chr7_3:82306715-82306734 | None:intergenic | 50.0% | |
| GTCAATAGAGGCCGCTATAG+CGG | + | chr7_3:82307066-82307085 | None:intergenic | 50.0% | |
| TTGATTGAGCGGCGTTCAGT+TGG | - | chr7_3:82307281-82307300 | Msa1130190:intron | 50.0% | |
| TGATTGAGCGGCGTTCAGTT+GGG | - | chr7_3:82307282-82307301 | Msa1130190:intron | 50.0% | |
| GTTATGCAACTGGCTACGGA+AGG | - | chr7_3:82307417-82307436 | Msa1130190:intron | 50.0% | |
| GCAACAACCACCATAGCATC+AGG | + | chr7_3:82307686-82307705 | None:intergenic | 50.0% | |
| GCTATGGTGGTTGTTGCTGA+TGG | - | chr7_3:82307689-82307708 | Msa1130190:CDS | 50.0% | |
| !! | TTGGCATACGGTACTGACTC+AGG | - | chr7_3:82307793-82307812 | Msa1130190:intron | 50.0% |
| AGCAACAAACCTGTGCTCCG+CGG | + | chr7_3:82303482-82303501 | None:intergenic | 55.0% | |
| ATGGAGTACGTCAGCCCAGA+AGG | - | chr7_3:82303712-82303731 | Msa1130190:intron | 55.0% | |
| CCATCAGAGCGAAGTCCTTC+TGG | + | chr7_3:82303730-82303749 | None:intergenic | 55.0% | |
| CCAGAAGGACTTCGCTCTGA+TGG | - | chr7_3:82303727-82303746 | Msa1130190:intron | 55.0% | |
| ACGGCAGTACTTCCATGGGT+CGG | + | chr7_3:82303756-82303775 | None:intergenic | 55.0% | |
| GGGAAACGGCAGTACTTCCA+TGG | + | chr7_3:82303761-82303780 | None:intergenic | 55.0% | |
| TGAGGAAACCAAAGGGCGAC+AGG | - | chr7_3:82304410-82304429 | Msa1130190:intron | 55.0% | |
| GATGGGAAAGGGATGGGAGA+GGG | - | chr7_3:82305260-82305279 | Msa1130190:intron | 55.0% | |
| ACTTTGGCCCTAGCTGATGC+TGG | - | chr7_3:82305994-82306013 | Msa1130190:intron | 55.0% | |
| CTTTGGCCCTAGCTGATGCT+GGG | - | chr7_3:82305995-82306014 | Msa1130190:intron | 55.0% | |
| AGGGATCCCAGCATCAGCTA+GGG | + | chr7_3:82306004-82306023 | None:intergenic | 55.0% | |
| TAGGGATCCCAGCATCAGCT+AGG | + | chr7_3:82306005-82306024 | None:intergenic | 55.0% | |
| !! | CAAGCAGAGGGGTGCTATTG+AGG | + | chr7_3:82306062-82306081 | None:intergenic | 55.0% |
| CTCAATAGCACCCCTCTGCT+TGG | - | chr7_3:82306060-82306079 | Msa1130190:intron | 55.0% | |
| GGGGGTCCTGATGTAACTGT+AGG | - | chr7_3:82306246-82306265 | Msa1130190:intron | 55.0% | |
| ACAAAAGGTCCCCGGAAGTG+CGG | + | chr7_3:82306739-82306758 | None:intergenic | 55.0% | |
| !! | CATACGGTACTGACTCAGGC+AGG | - | chr7_3:82307797-82307816 | Msa1130190:intron | 55.0% |
| ACTGCAGTGCCAAGGGTGGT+CGG | + | chr7_3:82303453-82303472 | None:intergenic | 60.0% | |
| AACAAACCTGTGCTCCGCGG+CGG | + | chr7_3:82303479-82303498 | None:intergenic | 60.0% | |
| GGATGGGAAAGGGATGGGAG+AGG | - | chr7_3:82305259-82305278 | Msa1130190:intron | 60.0% | |
| GTCCCTCACTTCCGCACTTC+CGG | - | chr7_3:82306725-82306744 | Msa1130190:intron | 60.0% | |
| TCCCTCACTTCCGCACTTCC+GGG | - | chr7_3:82306726-82306745 | Msa1130190:intron | 60.0% | |
| !!! | GGTCGGCGGCGCTTTTTTGG+TGG | + | chr7_3:82303436-82303455 | None:intergenic | 65.0% |
| !!! | GGTGGTCGGCGGCGCTTTTT+TGG | + | chr7_3:82303439-82303458 | None:intergenic | 65.0% |
| GCTCACTGCAGTGCCAAGGG+TGG | + | chr7_3:82303457-82303476 | None:intergenic | 65.0% | |
| GCGGCTCACTGCAGTGCCAA+GGG | + | chr7_3:82303460-82303479 | None:intergenic | 65.0% | |
| CTCTGATGGTCGCCGACCCA+TGG | - | chr7_3:82303741-82303760 | Msa1130190:intron | 65.0% | |
| ! | CCCCGGAAGTGCGGAAGTGA+GGG | + | chr7_3:82306730-82306749 | None:intergenic | 65.0% |
| CCCTCACTTCCGCACTTCCG+GGG | - | chr7_3:82306727-82306746 | Msa1130190:intron | 65.0% | |
| ! | TCCCCGGAAGTGCGGAAGTG+AGG | + | chr7_3:82306731-82306750 | None:intergenic | 65.0% |
| GAGCGGCGTTCAGTTGGGTG+TGG | - | chr7_3:82307287-82307306 | Msa1130190:intron | 65.0% | |
| !! | AAAGCGCCGCCGACCACCCT+TGG | - | chr7_3:82303441-82303460 | Msa1130190:three_prime_UTR | 70.0% |
| GCAGTGCCAAGGGTGGTCGG+CGG | + | chr7_3:82303450-82303469 | None:intergenic | 70.0% | |
| GGCGGCTCACTGCAGTGCCA+AGG | + | chr7_3:82303461-82303480 | None:intergenic | 70.0% | |
| GGCACTGCAGTGAGCCGCCG+CGG | - | chr7_3:82303462-82303481 | Msa1130190:three_prime_UTR | 75.0% | |
| AGTGAGCCGCCGCGGAGCAC+AGG | - | chr7_3:82303470-82303489 | Msa1130190:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82303336 | 82308086 | 82303336 | ID=Msa1130190;Name=Msa1130190 |
| chr7_3 | mRNA | 82303336 | 82308086 | 82303336 | ID=Msa1130190-mRNA-1;Parent=Msa1130190;Name=Msa1130190-mRNA-1;_AED=0.17;_eAED=0.17;_QI=170|1|1|1|0.75|0.61|13|363|241 |
| chr7_3 | exon | 82303336 | 82303688 | 82303336 | ID=Msa1130190-mRNA-1:exon:24267;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82303797 | 82303854 | 82303797 | ID=Msa1130190-mRNA-1:exon:24266;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82303952 | 82304041 | 82303952 | ID=Msa1130190-mRNA-1:exon:24265;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82305117 | 82305202 | 82305117 | ID=Msa1130190-mRNA-1:exon:24264;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82305341 | 82305457 | 82305341 | ID=Msa1130190-mRNA-1:exon:24263;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82305622 | 82305658 | 82305622 | ID=Msa1130190-mRNA-1:exon:24262;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82305747 | 82305825 | 82305747 | ID=Msa1130190-mRNA-1:exon:24261;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82306991 | 82307058 | 82306991 | ID=Msa1130190-mRNA-1:exon:24260;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82307168 | 82307206 | 82307168 | ID=Msa1130190-mRNA-1:exon:24259;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82307365 | 82307425 | 82307365 | ID=Msa1130190-mRNA-1:exon:24258;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82307509 | 82307555 | 82307509 | ID=Msa1130190-mRNA-1:exon:24257;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82307657 | 82307724 | 82307657 | ID=Msa1130190-mRNA-1:exon:24256;Parent=Msa1130190-mRNA-1 |
| chr7_3 | exon | 82307931 | 82308086 | 82307931 | ID=Msa1130190-mRNA-1:exon:24255;Parent=Msa1130190-mRNA-1 |
| chr7_3 | five_prime_UTR | 82307931 | 82308086 | 82307931 | ID=Msa1130190-mRNA-1:five_prime_utr;Parent=Msa1130190-mRNA-1 |
| chr7_3 | five_prime_UTR | 82307711 | 82307724 | 82307711 | ID=Msa1130190-mRNA-1:five_prime_utr;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82307657 | 82307710 | 82307657 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82307509 | 82307555 | 82307509 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82307365 | 82307425 | 82307365 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82307168 | 82307206 | 82307168 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82306991 | 82307058 | 82306991 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82305747 | 82305825 | 82305747 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82305622 | 82305658 | 82305622 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82305341 | 82305457 | 82305341 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82305117 | 82305202 | 82305117 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82303952 | 82304041 | 82303952 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | CDS | 82303807 | 82303854 | 82303807 | ID=Msa1130190-mRNA-1:cds;Parent=Msa1130190-mRNA-1 |
| chr7_3 | three_prime_UTR | 82303797 | 82303806 | 82303797 | ID=Msa1130190-mRNA-1:three_prime_utr;Parent=Msa1130190-mRNA-1 |
| chr7_3 | three_prime_UTR | 82303336 | 82303688 | 82303336 | ID=Msa1130190-mRNA-1:three_prime_utr;Parent=Msa1130190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
