Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132050 | XP_024626636.1 | 80.612 | 98 | 19 | 0 | 331 | 428 | 178 | 275 | 1.52e-48 | 177 |
| Msa1132050 | XP_024626636.1 | 88.406 | 138 | 15 | 1 | 23 | 160 | 140 | 276 | 3.46e-78 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132050 | G7KVV6 | 80.612 | 98 | 19 | 0 | 331 | 428 | 206 | 303 | 1.29e-48 | 178 |
| Msa1132050 | G7KVV6 | 88.406 | 138 | 15 | 1 | 23 | 160 | 168 | 304 | 3.59e-78 | 254 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1132050 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0924750 | Msa1132050 | 0.860404 | 2.115720e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132050 | MtrunA17_Chr7g0233531 | 88.321 | 137 | 15 | 1 | 23 | 159 | 141 | 276 | 1.58e-81 | 252 |
| Msa1132050 | MtrunA17_Chr7g0233531 | 80.392 | 102 | 20 | 0 | 331 | 432 | 179 | 280 | 2.27e-54 | 182 |
| Msa1132050 | MtrunA17_Chr4g0027321 | 69.591 | 171 | 48 | 1 | 151 | 317 | 120 | 290 | 1.79e-75 | 237 |
| Msa1132050 | MtrunA17_Chr7g0233541 | 69.863 | 146 | 41 | 3 | 15 | 159 | 150 | 293 | 5.58e-65 | 210 |
| Msa1132050 | MtrunA17_Chr7g0233541 | 83.495 | 103 | 16 | 1 | 331 | 432 | 195 | 297 | 1.78e-53 | 180 |
| Msa1132050 | MtrunA17_Chr7g0233521 | 71.942 | 139 | 36 | 3 | 21 | 159 | 141 | 276 | 1.96e-63 | 206 |
| Msa1132050 | MtrunA17_Chr7g0233521 | 72.549 | 102 | 27 | 1 | 331 | 432 | 180 | 280 | 5.51e-45 | 157 |
| Msa1132050 | MtrunA17_Chr7g0233561 | 67.347 | 147 | 45 | 2 | 15 | 159 | 180 | 325 | 1.24e-59 | 197 |
| Msa1132050 | MtrunA17_Chr7g0233561 | 68.269 | 104 | 31 | 1 | 331 | 432 | 226 | 329 | 8.76e-42 | 150 |
| Msa1132050 | MtrunA17_Chr3g0131891 | 67.626 | 139 | 44 | 1 | 21 | 159 | 179 | 316 | 8.06e-58 | 192 |
| Msa1132050 | MtrunA17_Chr3g0131891 | 67.647 | 102 | 33 | 0 | 331 | 432 | 219 | 320 | 6.34e-42 | 151 |
| Msa1132050 | MtrunA17_Chr3g0120591 | 40.559 | 143 | 68 | 4 | 175 | 304 | 68 | 206 | 3.18e-22 | 94.7 |
| Msa1132050 | MtrunA17_Chr3g0120641 | 40.559 | 143 | 68 | 4 | 175 | 304 | 87 | 225 | 4.08e-22 | 94.7 |
| Msa1132050 | MtrunA17_Chr3g0119711 | 38.506 | 174 | 85 | 7 | 146 | 304 | 16 | 182 | 5.05e-22 | 93.2 |
| Msa1132050 | MtrunA17_Chr1g0208771 | 36.879 | 141 | 72 | 6 | 10 | 146 | 163 | 290 | 8.96e-17 | 82.0 |
| Msa1132050 | MtrunA17_Chr1g0208771 | 43.023 | 86 | 38 | 3 | 331 | 415 | 215 | 290 | 4.80e-11 | 64.3 |
| Msa1132050 | MtrunA17_Chr3g0120981 | 35.256 | 156 | 77 | 6 | 161 | 304 | 46 | 189 | 8.74e-16 | 75.9 |
| Msa1132050 | MtrunA17_Chr1g0163071 | 40.179 | 112 | 55 | 4 | 35 | 146 | 188 | 287 | 6.66e-15 | 75.1 |
| Msa1132050 | MtrunA17_Chr1g0163071 | 44.706 | 85 | 37 | 2 | 331 | 415 | 213 | 287 | 2.52e-12 | 67.4 |
| Msa1132050 | MtrunA17_Chr3g0120961 | 35.766 | 137 | 68 | 6 | 175 | 303 | 48 | 172 | 9.33e-14 | 69.7 |
| Msa1132050 | MtrunA17_Chr8g0390841 | 38.129 | 139 | 70 | 6 | 11 | 146 | 206 | 331 | 3.62e-13 | 71.2 |
| Msa1132050 | MtrunA17_Chr3g0120941 | 35.252 | 139 | 67 | 6 | 161 | 289 | 84 | 209 | 1.07e-11 | 64.7 |
| Msa1132050 | MtrunA17_Chr3g0120951 | 34.532 | 139 | 68 | 6 | 161 | 289 | 48 | 173 | 1.17e-11 | 63.9 |
| Msa1132050 | MtrunA17_Chr4g0033961 | 30.534 | 131 | 84 | 3 | 21 | 151 | 270 | 393 | 3.94e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 76 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCATGGATATGCTTGTTT+TGG | 0.307797 | 7_3:+84948602 | Msa1132050:CDS |
| GAACGCCGCTTATACATAAA+TGG | 0.335076 | 7_3:-84947839 | None:intergenic |
| TGGTAATAAACACTTTGATT+TGG | 0.355549 | 7_3:+84949437 | Msa1132050:CDS |
| CCACCTGGTTGCGATTTAAC+TGG | 0.355870 | 7_3:+84948074 | Msa1132050:CDS |
| TTCAAATTGTAGTCCGTTAC+GGG | 0.357490 | 7_3:-84949535 | None:intergenic |
| CGTTGAACATAGATTTCTAA+TGG | 0.376360 | 7_3:+84946196 | Msa1132050:CDS |
| TTGACTGTCGTTCTCATACT+TGG | 0.379474 | 7_3:-84947816 | None:intergenic |
| ATGAAGGAGTTTGGCCTACT+AGG | 0.386073 | 7_3:+84946603 | Msa1132050:CDS |
| AGGTGTTAAATAAAGGAGTT+TGG | 0.387066 | 7_3:+84949487 | Msa1132050:CDS |
| AGGTGTTAAATGAAGGAGTT+TGG | 0.387476 | 7_3:+84946594 | Msa1132050:CDS |
| TGGTAATAGACACTTTGATT+TGG | 0.405062 | 7_3:+84946544 | Msa1132050:CDS |
| GTCTGGAAAGTTGTTAGATC+AGG | 0.411819 | 7_3:-84948371 | None:intergenic |
| CAGAATATACCACGTATGTT+TGG | 0.412403 | 7_3:+84949417 | Msa1132050:intron |
| ACACTTTGTGTTGTCATTGT+CGG | 0.416261 | 7_3:-84946783 | None:intergenic |
| ACTTTATGAAACACAAAAGT+TGG | 0.418561 | 7_3:-84948263 | None:intergenic |
| GCTGGTATTTCTTTAACTGC+TGG | 0.423873 | 7_3:+84948305 | Msa1132050:CDS |
| ATAGTGATTATGAGGAATAC+TGG | 0.428542 | 7_3:+84947792 | Msa1132050:CDS |
| GGCCTGAAAAGTACTCTATC+AGG | 0.436391 | 7_3:+84949508 | Msa1132050:CDS |
| TTTCAAATTGTAGTCCGTTA+CGG | 0.442201 | 7_3:-84949536 | None:intergenic |
| CTGTGTTTAAGAACCAGGCT+TGG | 0.448983 | 7_3:+84947870 | Msa1132050:CDS |
| CATCTTGAACTACATGAGTC+TGG | 0.449948 | 7_3:-84948388 | None:intergenic |
| TGGAGATCCATTGAAGGTAC+TGG | 0.453748 | 7_3:+84944430 | Msa1132050:CDS |
| CGAGTTTGCTTTGAATAAGC+AGG | 0.455151 | 7_3:+84948154 | Msa1132050:CDS |
| GTATTTCTTTAACTGCTGGT+AGG | 0.460852 | 7_3:+84948309 | Msa1132050:CDS |
| TCGATCTCCAGTACCTTCAA+TGG | 0.467156 | 7_3:-84944437 | None:intergenic |
| TATTTCTTTAACTGCTGGTA+GGG | 0.470429 | 7_3:+84948310 | Msa1132050:CDS |
| TTTGATTTGGAGAAGAAAAG+AGG | 0.488349 | 7_3:+84946557 | Msa1132050:CDS |
| ATCAAACTGTAATCCTGTAC+TGG | 0.494341 | 7_3:-84946642 | None:intergenic |
| CCTCACGATCCAACCAAGCC+TGG | 0.508758 | 7_3:-84947883 | None:intergenic |
| GTTTAAGAACCAGGCTTGGT+TGG | 0.512575 | 7_3:+84947874 | Msa1132050:CDS |
| CAGACTCATGTAGTTCAAGA+TGG | 0.513524 | 7_3:+84948389 | Msa1132050:CDS |
| ACTGGAGATCGATTGAATCT+TGG | 0.513671 | 7_3:+84944448 | Msa1132050:CDS |
| CGCATGACAGCAACAAAGGA+TGG | 0.517132 | 7_3:-84946164 | None:intergenic |
| TTCTGAGTATAGTGATTATG+AGG | 0.519008 | 7_3:+84947784 | Msa1132050:CDS |
| TCTAAAGATATGAACAATGA+AGG | 0.522026 | 7_3:-84949649 | None:intergenic |
| TCTATCAGGAAGTCCAGTAC+AGG | 0.523027 | 7_3:+84946629 | Msa1132050:CDS |
| GAGGACAATAACTTGAAAGT+TGG | 0.523457 | 7_3:+84946692 | Msa1132050:CDS |
| TGGTTCTGTGTTTAAGAACC+AGG | 0.524512 | 7_3:+84947865 | Msa1132050:CDS |
| ATGTATAAGCGGCGTTCTGA+TGG | 0.531157 | 7_3:+84947845 | Msa1132050:CDS |
| AAGGACAACAACTTGAAAGT+TGG | 0.537339 | 7_3:+84949585 | Msa1132050:CDS |
| TAAAGAAATACCAGCAGGAT+GGG | 0.537748 | 7_3:-84948297 | None:intergenic |
| TTGCAGGAATCTACCTGCCA+TGG | 0.540458 | 7_3:+84948587 | Msa1132050:intron |
| GTCAAGTGTACCCATCCTGC+TGG | 0.541207 | 7_3:+84948287 | Msa1132050:CDS |
| TTAAATCGCAACCAGGTGGA+TGG | 0.551434 | 7_3:-84948070 | None:intergenic |
| TTAGATTGGAGATCCATTGA+AGG | 0.553175 | 7_3:+84944424 | Msa1132050:CDS |
| TGATATCACAAGTGGATGGA+AGG | 0.558355 | 7_3:+84946661 | Msa1132050:CDS |
| CTCATCTTCATCTAAATCGA+GGG | 0.563365 | 7_3:-84948108 | None:intergenic |
| TAAATCGCAACCAGGTGGAT+GGG | 0.565179 | 7_3:-84948069 | None:intergenic |
| GATGCTATCGCCCATCCACC+TGG | 0.569398 | 7_3:+84948059 | Msa1132050:CDS |
| GGACTACAATTTGAAATCAC+AGG | 0.572706 | 7_3:+84949543 | Msa1132050:CDS |
| TGAAATCACAGGTGGATGGA+AGG | 0.573664 | 7_3:+84949554 | Msa1132050:CDS |
| TTACAGTTTGATATCACAAG+TGG | 0.574741 | 7_3:+84946653 | Msa1132050:CDS |
| CCAGGCTTGGTTGGATCGTG+AGG | 0.575302 | 7_3:+84947883 | Msa1132050:CDS |
| GTCAACCATTTATGTATAAG+CGG | 0.575552 | 7_3:+84947834 | Msa1132050:CDS |
| TTTGATTTGGATAAGAAGAG+AGG | 0.576081 | 7_3:+84949450 | Msa1132050:CDS |
| CGTTGTTCACATCTTTCGAG+AGG | 0.576702 | 7_3:+84946760 | Msa1132050:CDS |
| TGGATGGAAGGCATTTGTAA+AGG | 0.581014 | 7_3:+84949566 | Msa1132050:CDS |
| AATATACCACGTAATACGTA+TGG | 0.585811 | 7_3:+84946524 | Msa1132050:CDS |
| AGTTTGATATCACAAGTGGA+TGG | 0.587991 | 7_3:+84946657 | Msa1132050:CDS |
| AAAACAAGCATATCCATGGC+AGG | 0.590966 | 7_3:-84948600 | None:intergenic |
| TTCCTGATAGAAAACCTAGT+AGG | 0.591449 | 7_3:-84946617 | None:intergenic |
| AACCAAAACAAGCATATCCA+TGG | 0.599725 | 7_3:-84948604 | None:intergenic |
| GCAGTTAAAGAAATACCAGC+AGG | 0.600140 | 7_3:-84948302 | None:intergenic |
| AATTTGAAATCACAGGTGGA+TGG | 0.610355 | 7_3:+84949550 | Msa1132050:CDS |
| CTGCCAGTTAAATCGCAACC+AGG | 0.615393 | 7_3:-84948077 | None:intergenic |
| TCTATCAGGAAGACCCGTAA+CGG | 0.616361 | 7_3:+84949522 | Msa1132050:CDS |
| TTAAAGAAATACCAGCAGGA+TGG | 0.630544 | 7_3:-84948298 | None:intergenic |
| CTATTACCATACGTATTACG+TGG | 0.633917 | 7_3:-84946530 | None:intergenic |
| TGCACGCATGACAGCAACAA+AGG | 0.634058 | 7_3:-84946168 | None:intergenic |
| GCTCATCTTCATCTAAATCG+AGG | 0.638236 | 7_3:-84948109 | None:intergenic |
| CTACAATTTGAAATCACAGG+TGG | 0.644262 | 7_3:+84949546 | Msa1132050:CDS |
| TCATCTTCATCTAAATCGAG+GGG | 0.668232 | 7_3:-84948107 | None:intergenic |
| TGGATGGAAGGCATTTGCAG+AGG | 0.673309 | 7_3:+84946673 | Msa1132050:CDS |
| TCGAAAGATGTGAACAACGA+AGG | 0.676161 | 7_3:-84946756 | None:intergenic |
| CCAGTTAAATCGCAACCAGG+TGG | 0.680990 | 7_3:-84948074 | None:intergenic |
| TGTTTATTACCAAACATACG+TGG | 0.720229 | 7_3:-84949426 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCCTTTTTATTTTTTTA+AGG | + | chr7_3:84944489-84944508 | Msa1132050:intron | 10.0% |
| !!! | TTTCCTTTTTATTTTTTTAA+GGG | + | chr7_3:84944490-84944509 | Msa1132050:intron | 10.0% |
| !! | TATTGAAAAAATCTAATTAA+TGG | - | chr7_3:84944749-84944768 | None:intergenic | 10.0% |
| !! | GTTAAATATAAAAAAAAATG+AGG | - | chr7_3:84944900-84944919 | None:intergenic | 10.0% |
| !!! | AAAATATATTTTTTTACCTT+TGG | - | chr7_3:84945829-84945848 | None:intergenic | 10.0% |
| !! | AATTTAAAAATAATTTAACG+TGG | + | chr7_3:84946313-84946332 | Msa1132050:intron | 10.0% |
| !!! | TTATTTGTTATTTGTTACAA+GGG | + | chr7_3:84944581-84944600 | Msa1132050:intron | 15.0% |
| !! | ATTAGAGTGTATTTATTTAA+AGG | + | chr7_3:84944688-84944707 | Msa1132050:intron | 15.0% |
| !! | TAAAAAAAAAGGTTTGATAT+CGG | - | chr7_3:84944779-84944798 | None:intergenic | 15.0% |
| !!! | TCAAACCTTTTTTTTTAAAT+CGG | + | chr7_3:84944782-84944801 | Msa1132050:intron | 15.0% |
| !!! | ATACCTTATTTTAAGAAAAA+AGG | - | chr7_3:84944853-84944872 | None:intergenic | 15.0% |
| !! | AAATATAAAAAAAAATGAGG+TGG | - | chr7_3:84944897-84944916 | None:intergenic | 15.0% |
| !!! | ATACCAATTTTATTAAAAAG+AGG | - | chr7_3:84945000-84945019 | None:intergenic | 15.0% |
| !! | GTATAATATTAATAATCCTT+TGG | + | chr7_3:84945016-84945035 | Msa1132050:intron | 15.0% |
| !! | TTCTATCATACAAATTAATA+TGG | + | chr7_3:84945380-84945399 | Msa1132050:intron | 15.0% |
| !! | AAAAATATTTACCTCAAAAT+TGG | - | chr7_3:84945624-84945643 | None:intergenic | 15.0% |
| !! | TTCTTCTTACTTATTTAATT+AGG | + | chr7_3:84948238-84948257 | Msa1132050:intron | 15.0% |
| !!! | GTTATTTGTTATTTGTTACA+AGG | + | chr7_3:84944580-84944599 | Msa1132050:intron | 20.0% |
| !!! | AATTCACTTGTTTGTTTTTA+TGG | + | chr7_3:84944630-84944649 | Msa1132050:intron | 20.0% |
| !!! | CAAACCTTTTTTTTTAAATC+GGG | + | chr7_3:84944783-84944802 | Msa1132050:intron | 20.0% |
| !!! | AAAAGGTGTGAAATAATAAA+AGG | - | chr7_3:84944836-84944855 | None:intergenic | 20.0% |
| !!! | ACACCTTTTTTCTTAAAATA+AGG | + | chr7_3:84944847-84944866 | Msa1132050:intron | 20.0% |
| !!! | ATCAGTTTTTTCTTAAAATC+AGG | + | chr7_3:84944920-84944939 | Msa1132050:intron | 20.0% |
| !!! | TTTTTTCTTAAAATCAGGTT+TGG | + | chr7_3:84944925-84944944 | Msa1132050:intron | 20.0% |
| !!! | ATTGAAAATTTCAGTTTTAG+TGG | - | chr7_3:84944958-84944977 | None:intergenic | 20.0% |
| !!! | ACACCTCTTTTTAATAAAAT+TGG | + | chr7_3:84944994-84945013 | Msa1132050:intron | 20.0% |
| !!! | GACGTTTTAAAAAAGAAAAA+AGG | - | chr7_3:84945101-84945120 | None:intergenic | 20.0% |
| !!! | TTTTATGATTTGATAAGTCA+CGG | - | chr7_3:84945248-84945267 | None:intergenic | 20.0% |
| !! | TGGAAAATGGAAATTAAATT+TGG | + | chr7_3:84945493-84945512 | Msa1132050:intron | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | + | chr7_3:84945506-84945525 | Msa1132050:intron | 20.0% |
| !!! | AAAATAATTTAACGTGGTTT+TGG | + | chr7_3:84946319-84946338 | Msa1132050:intron | 20.0% |
| !!! | CATTTGTTTTTTCTTTTGTT+TGG | + | chr7_3:84946498-84946517 | Msa1132050:intron | 20.0% |
| !!! | GAAGTTTTTGAAATCATTAT+TGG | + | chr7_3:84946937-84946956 | Msa1132050:intron | 20.0% |
| !! | AACAAAAGGTTAAAACAAAA+TGG | + | chr7_3:84947007-84947026 | Msa1132050:intron | 20.0% |
| !! | TAAAAGAAAAGACAATGTTA+AGG | - | chr7_3:84949392-84949411 | None:intergenic | 20.0% |
| !!! | ACATTGTCTTTTCTTTTAAT+TGG | + | chr7_3:84949394-84949413 | Msa1132050:intron | 20.0% |
| !!! | TATTTTCAGGTGTTAAATAA+AGG | + | chr7_3:84949480-84949499 | Msa1132050:CDS | 20.0% |
| ! | CGTCCCTTAAAAAAATAAAA+AGG | - | chr7_3:84944496-84944515 | None:intergenic | 25.0% |
| ! | TGTATTTATTTAAAGGTCTC+AGG | + | chr7_3:84944695-84944714 | Msa1132050:intron | 25.0% |
| ! | CAAACCCGATTTAAAAAAAA+AGG | - | chr7_3:84944790-84944809 | None:intergenic | 25.0% |
| !!! | CTTTTTTTTTAAATCGGGTT+TGG | + | chr7_3:84944788-84944807 | Msa1132050:intron | 25.0% |
| ! | AAACGTCAATATTTAAGAGA+CGG | + | chr7_3:84945114-84945133 | Msa1132050:intron | 25.0% |
| ! | CTTATGATGACATAACAAAA+GGG | + | chr7_3:84945162-84945181 | Msa1132050:intron | 25.0% |
| ! | TTTATGATTTGATAAGTCAC+GGG | - | chr7_3:84945247-84945266 | None:intergenic | 25.0% |
| ! | ATTCGAATACTAAGATGATA+TGG | - | chr7_3:84945313-84945332 | None:intergenic | 25.0% |
| !! | TGAAAAAACTTCCAATTTTG+AGG | + | chr7_3:84945610-84945629 | Msa1132050:intron | 25.0% |
| ! | AGAATTATTTCCTTGATCAT+TGG | - | chr7_3:84945705-84945724 | None:intergenic | 25.0% |
| ! | CAAGGAAATAATTCTCTAAA+TGG | + | chr7_3:84945710-84945729 | Msa1132050:intron | 25.0% |
| ! | TAGTATGCATTAAATCTAGT+AGG | + | chr7_3:84945964-84945983 | Msa1132050:intron | 25.0% |
| ! | TAAACAACTAGAGAAAGATT+TGG | - | chr7_3:84946260-84946279 | None:intergenic | 25.0% |
| ! | GTTAATGCATAAAAAATGTG+TGG | - | chr7_3:84946479-84946498 | None:intergenic | 25.0% |
| !!! | AAGAGGAGATATTTATTTTC+AGG | + | chr7_3:84946574-84946593 | Msa1132050:CDS | 25.0% |
| !!! | TATTTTCAGGTGTTAAATGA+AGG | + | chr7_3:84946587-84946606 | Msa1132050:CDS | 25.0% |
| !! | TTTTAACCTTTTGTTCTATG+TGG | - | chr7_3:84947002-84947021 | None:intergenic | 25.0% |
| ! | GGTTAAAACAAAATGGTTAT+TGG | + | chr7_3:84947014-84947033 | Msa1132050:intron | 25.0% |
| ! | TCGTGAAACAAAAAAACTAT+TGG | + | chr7_3:84947053-84947072 | Msa1132050:intron | 25.0% |
| !!! | AAACCATTGATTCTGTTTTT+TGG | + | chr7_3:84947113-84947132 | Msa1132050:intron | 25.0% |
| !!! | AACCATTGATTCTGTTTTTT+GGG | + | chr7_3:84947114-84947133 | Msa1132050:intron | 25.0% |
| ! | ATTTGTTCGAATTTACAACA+AGG | - | chr7_3:84947145-84947164 | None:intergenic | 25.0% |
| !! | ACAAGTAAAATATTTTGCAC+AGG | + | chr7_3:84947283-84947302 | Msa1132050:intron | 25.0% |
| !!! | TTTTCTTTTGGTTTTGGTTT+GGG | - | chr7_3:84947400-84947419 | None:intergenic | 25.0% |
| !!! | CTCTTAATTTTGATTGATTC+TGG | + | chr7_3:84948016-84948035 | Msa1132050:intron | 25.0% |
| ! | ACTTTATGAAACACAAAAGT+TGG | - | chr7_3:84948266-84948285 | None:intergenic | 25.0% |
| ! | TGTATGGTAAAATGAAAAGA+TGG | - | chr7_3:84948497-84948516 | None:intergenic | 25.0% |
| ! | CAAAAGGAATACATAATCAA+GGG | - | chr7_3:84948570-84948589 | None:intergenic | 25.0% |
| ! | TTATGACTTTATGTACCATA+TGG | + | chr7_3:84948687-84948706 | Msa1132050:intron | 25.0% |
| ! | AAAAAGAAACGAAACTCTAA+AGG | - | chr7_3:84948828-84948847 | None:intergenic | 25.0% |
| ! | CATTAACTTAATTTCAGATC+AGG | - | chr7_3:84948999-84949018 | None:intergenic | 25.0% |
| ! | TGGTAATAAACACTTTGATT+TGG | + | chr7_3:84949437-84949456 | Msa1132050:CDS | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | - | chr7_3:84949652-84949671 | None:intergenic | 25.0% |
| ATTGAATCTTGGTGAGATTT+GGG | + | chr7_3:84944459-84944478 | Msa1132050:intron | 30.0% | |
| !!! | GGTGTTGACTTTTGTTTTTA+TGG | + | chr7_3:84944651-84944670 | Msa1132050:intron | 30.0% |
| AGGTGTGAAATAATAAAAGG+TGG | - | chr7_3:84944833-84944852 | None:intergenic | 30.0% | |
| TTCTTAAAATCAGGTTTGGA+AGG | + | chr7_3:84944929-84944948 | Msa1132050:intron | 30.0% | |
| ACTAGTGAAAATTTGACCAA+AGG | - | chr7_3:84945035-84945054 | None:intergenic | 30.0% | |
| !! | CCTTTTGTTATGTCATCATA+AGG | - | chr7_3:84945164-84945183 | None:intergenic | 30.0% |
| CCTTATGATGACATAACAAA+AGG | + | chr7_3:84945161-84945180 | Msa1132050:intron | 30.0% | |
| ! | GTCTTTAGACATGTTTCTTT+TGG | - | chr7_3:84945464-84945483 | None:intergenic | 30.0% |
| ! | AATTTCCATTTTCCACCATT+TGG | - | chr7_3:84945488-84945507 | None:intergenic | 30.0% |
| CATATCTAAAAAGCAGAAGA+TGG | - | chr7_3:84945592-84945611 | None:intergenic | 30.0% | |
| !!! | TATTTTTGAAAAGAGTGCCT+TGG | + | chr7_3:84945637-84945656 | Msa1132050:intron | 30.0% |
| CAAAAGAGTTGAAGCTAAAA+CGG | + | chr7_3:84945676-84945695 | Msa1132050:intron | 30.0% | |
| ACTACTACTTCCAAATTCAA+AGG | - | chr7_3:84945777-84945796 | None:intergenic | 30.0% | |
| AGTAGTAGTTGTGTTAAAGT+TGG | + | chr7_3:84945788-84945807 | Msa1132050:intron | 30.0% | |
| GTAGTAGTTGTGTTAAAGTT+GGG | + | chr7_3:84945789-84945808 | Msa1132050:intron | 30.0% | |
| TAAAGTTGGGAAATCACAAA+AGG | + | chr7_3:84945802-84945821 | Msa1132050:intron | 30.0% | |
| !! | TTTCTTTTCTTGAAGTGTCA+AGG | + | chr7_3:84945930-84945949 | Msa1132050:intron | 30.0% |
| !! | TTCTTTTCTTGAAGTGTCAA+GGG | + | chr7_3:84945931-84945950 | Msa1132050:intron | 30.0% |
| CATCTCATGTTAAGTATAGT+AGG | + | chr7_3:84945987-84946006 | Msa1132050:intron | 30.0% | |
| !! | AGTAGGCATTAAATTTTAGC+AGG | + | chr7_3:84946004-84946023 | Msa1132050:intron | 30.0% |
| ! | TTTAGCAGGTCTTGATTTTT+AGG | + | chr7_3:84946018-84946037 | Msa1132050:intron | 30.0% |
| ATATTTCATGATCATCTTCC+AGG | - | chr7_3:84946046-84946065 | None:intergenic | 30.0% | |
| !! | CACTTGTTTTTCTGCAAAAT+TGG | - | chr7_3:84946084-84946103 | None:intergenic | 30.0% |
| CGTTGAACATAGATTTCTAA+TGG | + | chr7_3:84946196-84946215 | Msa1132050:CDS | 30.0% | |
| ! | CTAGAGAAAGATTTGGTTAT+TGG | - | chr7_3:84946253-84946272 | None:intergenic | 30.0% |
| ! | TCTAGTTGTTTACTAGCTTA+AGG | + | chr7_3:84946268-84946287 | Msa1132050:intron | 30.0% |
| AATATACCACGTAATACGTA+TGG | + | chr7_3:84946524-84946543 | Msa1132050:CDS | 30.0% | |
| TGGTAATAGACACTTTGATT+TGG | + | chr7_3:84946544-84946563 | Msa1132050:CDS | 30.0% | |
| !! | TTTGATTTGGAGAAGAAAAG+AGG | + | chr7_3:84946557-84946576 | Msa1132050:CDS | 30.0% |
| TTACAGTTTGATATCACAAG+TGG | + | chr7_3:84946653-84946672 | Msa1132050:CDS | 30.0% | |
| TCTATGAAGATAGAACAAGA+TGG | - | chr7_3:84946894-84946913 | None:intergenic | 30.0% | |
| TTCTATCTTCATAGAACGAT+TGG | + | chr7_3:84946899-84946918 | Msa1132050:intron | 30.0% | |
| TTCTAACCACATAGAACAAA+AGG | + | chr7_3:84946993-84947012 | Msa1132050:intron | 30.0% | |
| TTCCCAAAAAACAGAATCAA+TGG | - | chr7_3:84947119-84947138 | None:intergenic | 30.0% | |
| AACTTAGATTTGTGAAGCAA+AGG | + | chr7_3:84947166-84947185 | Msa1132050:intron | 30.0% | |
| !!! | TGTTTTGTTGTTGTTGTTTG+AGG | - | chr7_3:84947216-84947235 | None:intergenic | 30.0% |
| TGTGTAAAAATCAATCCATG+TGG | + | chr7_3:84947321-84947340 | Msa1132050:intron | 30.0% | |
| TAAAAATCAATCCATGTGGA+GGG | + | chr7_3:84947325-84947344 | Msa1132050:intron | 30.0% | |
| !!! | CTTTTCTTTTGGTTTTGGTT+TGG | - | chr7_3:84947401-84947420 | None:intergenic | 30.0% |
| CAAACCAAAACCAAAAGAAA+AGG | + | chr7_3:84947399-84947418 | Msa1132050:intron | 30.0% | |
| !!! | CATTCCTTTTCTTTTGGTTT+TGG | - | chr7_3:84947406-84947425 | None:intergenic | 30.0% |
| CAAAACCAAAAGAAAAGGAA+TGG | + | chr7_3:84947404-84947423 | Msa1132050:intron | 30.0% | |
| CAAAAGAAAAGGAATGGAAT+GGG | + | chr7_3:84947410-84947429 | Msa1132050:intron | 30.0% | |
| AAAAGAAAAGGAATGGAATG+GGG | + | chr7_3:84947411-84947430 | Msa1132050:intron | 30.0% | |
| TCCTCGTTTATATAGGTTTA+GGG | + | chr7_3:84947436-84947455 | Msa1132050:intron | 30.0% | |
| ! | GTTTATATAGGTTTAGGGTT+AGG | + | chr7_3:84947441-84947460 | Msa1132050:intron | 30.0% |
| TGAAATCGGAATATCGTATT+TGG | + | chr7_3:84947565-84947584 | Msa1132050:intron | 30.0% | |
| GAAATCGGAATATCGTATTT+GGG | + | chr7_3:84947566-84947585 | Msa1132050:intron | 30.0% | |
| ATTCATATGAGAAGGATAAG+CGG | + | chr7_3:84947612-84947631 | Msa1132050:intron | 30.0% | |
| TTCTGAGTATAGTGATTATG+AGG | + | chr7_3:84947784-84947803 | Msa1132050:CDS | 30.0% | |
| ATAGTGATTATGAGGAATAC+TGG | + | chr7_3:84947792-84947811 | Msa1132050:CDS | 30.0% | |
| GTCAACCATTTATGTATAAG+CGG | + | chr7_3:84947834-84947853 | Msa1132050:CDS | 30.0% | |
| TATTTCTTTAACTGCTGGTA+GGG | + | chr7_3:84948310-84948329 | Msa1132050:CDS | 30.0% | |
| !! | TACATTACTTTTCAAGCAAC+AGG | + | chr7_3:84948338-84948357 | Msa1132050:CDS | 30.0% |
| !! | ACATTACTTTTCAAGCAACA+GGG | + | chr7_3:84948339-84948358 | Msa1132050:CDS | 30.0% |
| ATGATTACTAACCATAACCA+CGG | - | chr7_3:84948464-84948483 | None:intergenic | 30.0% | |
| TGCATTATATGTAATCACAC+CGG | + | chr7_3:84948533-84948552 | Msa1132050:intron | 30.0% | |
| AATACATAATCAAGGGTTAG+GGG | - | chr7_3:84948563-84948582 | None:intergenic | 30.0% | |
| GAATACATAATCAAGGGTTA+GGG | - | chr7_3:84948564-84948583 | None:intergenic | 30.0% | |
| GCAAAAGGAATACATAATCA+AGG | - | chr7_3:84948571-84948590 | None:intergenic | 30.0% | |
| ! | TGATTATGTATTCCTTTTGC+AGG | + | chr7_3:84948571-84948590 | Msa1132050:intron | 30.0% |
| TGAGTGACATAAATACCATA+TGG | - | chr7_3:84948705-84948724 | None:intergenic | 30.0% | |
| ATCTATCTATCTGTGTAACT+AGG | + | chr7_3:84948757-84948776 | Msa1132050:intron | 30.0% | |
| ACAACTTCTAGTCATTCAAT+GGG | - | chr7_3:84948887-84948906 | None:intergenic | 30.0% | |
| AACAACTTCTAGTCATTCAA+TGG | - | chr7_3:84948888-84948907 | None:intergenic | 30.0% | |
| ATGAGACATGAATTTAGCAA+TGG | - | chr7_3:84948933-84948952 | None:intergenic | 30.0% | |
| TGTCTCATAATTCATGATTG+TGG | + | chr7_3:84948945-84948964 | Msa1132050:intron | 30.0% | |
| TCAGGTTAAGATCTAATACA+CGG | - | chr7_3:84948981-84949000 | None:intergenic | 30.0% | |
| ACAAACTAATCAAACCACAA+AGG | - | chr7_3:84949033-84949052 | None:intergenic | 30.0% | |
| !! | TGTGGTTTGATTAGTTTGTT+AGG | + | chr7_3:84949034-84949053 | Msa1132050:intron | 30.0% |
| !! | TAGTTTGTTAGGTGATTGAT+AGG | + | chr7_3:84949045-84949064 | Msa1132050:intron | 30.0% |
| AAGTATTTGAATAACGCTTG+AGG | + | chr7_3:84949096-84949115 | Msa1132050:intron | 30.0% | |
| AGTATTTGAATAACGCTTGA+GGG | + | chr7_3:84949097-84949116 | Msa1132050:intron | 30.0% | |
| ! | TAATCTTGATGTCACTTGTT+AGG | - | chr7_3:84949277-84949296 | None:intergenic | 30.0% |
| TGTTTATTACCAAACATACG+TGG | - | chr7_3:84949429-84949448 | None:intergenic | 30.0% | |
| !! | TTTGATTTGGATAAGAAGAG+AGG | + | chr7_3:84949450-84949469 | Msa1132050:CDS | 30.0% |
| !! | GAGAGGAGATATTTATTTTC+AGG | + | chr7_3:84949467-84949486 | Msa1132050:CDS | 30.0% |
| AGGTGTTAAATAAAGGAGTT+TGG | + | chr7_3:84949487-84949506 | Msa1132050:CDS | 30.0% | |
| TTTCAAATTGTAGTCCGTTA+CGG | - | chr7_3:84949539-84949558 | None:intergenic | 30.0% | |
| TTAGATTGGAGATCCATTGA+AGG | + | chr7_3:84944424-84944443 | Msa1132050:CDS | 35.0% | |
| GATTGAATCTTGGTGAGATT+TGG | + | chr7_3:84944458-84944477 | Msa1132050:intron | 35.0% | |
| !! | GTCGCTTTGTGATTTTAATG+TGG | - | chr7_3:84945065-84945084 | None:intergenic | 35.0% |
| GTCAATATTTAAGAGACGGA+GGG | + | chr7_3:84945118-84945137 | Msa1132050:intron | 35.0% | |
| CATTTCTCCACAAATTGTCT+TGG | - | chr7_3:84945428-84945447 | None:intergenic | 35.0% | |
| AGACAATTTGTGGAGAAATG+TGG | + | chr7_3:84945428-84945447 | Msa1132050:intron | 35.0% | |
| ACATGTCTAAAGACTCCAAA+TGG | + | chr7_3:84945470-84945489 | Msa1132050:intron | 35.0% | |
| TTTGGTAAAAAGTGATGGCA+AGG | + | chr7_3:84945511-84945530 | Msa1132050:intron | 35.0% | |
| TAAAAAGTGATGGCAAGGTA+TGG | + | chr7_3:84945516-84945535 | Msa1132050:intron | 35.0% | |
| !! | TAGCTTCAACTCTTTTGGAA+GGG | - | chr7_3:84945673-84945692 | None:intergenic | 35.0% |
| ! | TTAGCTTCAACTCTTTTGGA+AGG | - | chr7_3:84945674-84945693 | None:intergenic | 35.0% |
| !!! | CGTTTTAGCTTCAACTCTTT+TGG | - | chr7_3:84945678-84945697 | None:intergenic | 35.0% |
| ACTACTTCCAAATTCAAAGG+AGG | - | chr7_3:84945774-84945793 | None:intergenic | 35.0% | |
| ! | GATTTTGCTCTTTCAAGAGT+TGG | - | chr7_3:84946128-84946147 | None:intergenic | 35.0% |
| !! | AATTTACCTCGGTGCAATTT+TGG | + | chr7_3:84946383-84946402 | Msa1132050:intron | 35.0% |
| CTATTACCATACGTATTACG+TGG | - | chr7_3:84946533-84946552 | None:intergenic | 35.0% | |
| AGGTGTTAAATGAAGGAGTT+TGG | + | chr7_3:84946594-84946613 | Msa1132050:CDS | 35.0% | |
| TTCCTGATAGAAAACCTAGT+AGG | - | chr7_3:84946620-84946639 | None:intergenic | 35.0% | |
| ATCAAACTGTAATCCTGTAC+TGG | - | chr7_3:84946645-84946664 | None:intergenic | 35.0% | |
| AGTTTGATATCACAAGTGGA+TGG | + | chr7_3:84946657-84946676 | Msa1132050:CDS | 35.0% | |
| GAGGACAATAACTTGAAAGT+TGG | + | chr7_3:84946692-84946711 | Msa1132050:CDS | 35.0% | |
| ACACTTTGTGTTGTCATTGT+CGG | - | chr7_3:84946786-84946805 | None:intergenic | 35.0% | |
| CTAGAAACCAAGTGTAAAAG+CGG | + | chr7_3:84947246-84947265 | Msa1132050:intron | 35.0% | |
| TAGAAACCAAGTGTAAAAGC+GGG | + | chr7_3:84947247-84947266 | Msa1132050:intron | 35.0% | |
| !!! | TTTTTTCCCGCTTTTACACT+TGG | - | chr7_3:84947256-84947275 | None:intergenic | 35.0% |
| GTAAAAATCAATCCATGTGG+AGG | + | chr7_3:84947324-84947343 | Msa1132050:intron | 35.0% | |
| AAAAATCAATCCATGTGGAG+GGG | + | chr7_3:84947326-84947345 | Msa1132050:intron | 35.0% | |
| ! | CCATTCCATTCCTTTTCTTT+TGG | - | chr7_3:84947412-84947431 | None:intergenic | 35.0% |
| CCAAAAGAAAAGGAATGGAA+TGG | + | chr7_3:84947409-84947428 | Msa1132050:intron | 35.0% | |
| GTCCTCGTTTATATAGGTTT+AGG | + | chr7_3:84947435-84947454 | Msa1132050:intron | 35.0% | |
| ACCCTAAACCTATATAAACG+AGG | - | chr7_3:84947440-84947459 | None:intergenic | 35.0% | |
| ! | TATATAGGTTTAGGGTTAGG+TGG | + | chr7_3:84947444-84947463 | Msa1132050:intron | 35.0% |
| TTGTGTTTCAATGTCGACAA+TGG | + | chr7_3:84947509-84947528 | Msa1132050:intron | 35.0% | |
| CACACTTTCTTTGCAGTATT+TGG | - | chr7_3:84947547-84947566 | None:intergenic | 35.0% | |
| ! | CTGCAAAGAAAGTGTGAAAT+CGG | + | chr7_3:84947551-84947570 | Msa1132050:intron | 35.0% |
| CGATGAAGATTCATATGAGA+AGG | + | chr7_3:84947604-84947623 | Msa1132050:intron | 35.0% | |
| TTCATATGAGAAGGATAAGC+GGG | + | chr7_3:84947613-84947632 | Msa1132050:intron | 35.0% | |
| TCATCTTCATCTAAATCGAG+GGG | - | chr7_3:84948110-84948129 | None:intergenic | 35.0% | |
| CTCATCTTCATCTAAATCGA+GGG | - | chr7_3:84948111-84948130 | None:intergenic | 35.0% | |
| ! | TTTGCTTTGAATAAGCAGGT+TGG | + | chr7_3:84948158-84948177 | Msa1132050:intron | 35.0% |
| TAAAGAAATACCAGCAGGAT+GGG | - | chr7_3:84948300-84948319 | None:intergenic | 35.0% | |
| TTAAAGAAATACCAGCAGGA+TGG | - | chr7_3:84948301-84948320 | None:intergenic | 35.0% | |
| GTATTTCTTTAACTGCTGGT+AGG | + | chr7_3:84948309-84948328 | Msa1132050:CDS | 35.0% | |
| GGAATACATAATCAAGGGTT+AGG | - | chr7_3:84948565-84948584 | None:intergenic | 35.0% | |
| AACCAAAACAAGCATATCCA+TGG | - | chr7_3:84948607-84948626 | None:intergenic | 35.0% | |
| AATACAGACATAATGGTTCG+CGG | - | chr7_3:84948860-84948879 | None:intergenic | 35.0% | |
| GGGAGAAAATACAGACATAA+TGG | - | chr7_3:84948867-84948886 | None:intergenic | 35.0% | |
| GTATTTGAATAACGCTTGAG+GGG | + | chr7_3:84949098-84949117 | Msa1132050:intron | 35.0% | |
| CAGAATATACCACGTATGTT+TGG | + | chr7_3:84949417-84949436 | Msa1132050:intron | 35.0% | |
| !! | TTCCTGATAGAGTACTTTTC+AGG | - | chr7_3:84949513-84949532 | None:intergenic | 35.0% |
| TTCAAATTGTAGTCCGTTAC+GGG | - | chr7_3:84949538-84949557 | None:intergenic | 35.0% | |
| ! | GGACTACAATTTGAAATCAC+AGG | + | chr7_3:84949543-84949562 | Msa1132050:CDS | 35.0% |
| ! | CTACAATTTGAAATCACAGG+TGG | + | chr7_3:84949546-84949565 | Msa1132050:CDS | 35.0% |
| ! | AATTTGAAATCACAGGTGGA+TGG | + | chr7_3:84949550-84949569 | Msa1132050:CDS | 35.0% |
| AAGGACAACAACTTGAAAGT+TGG | + | chr7_3:84949585-84949604 | Msa1132050:CDS | 35.0% | |
| ACTGGAGATCGATTGAATCT+TGG | + | chr7_3:84944448-84944467 | Msa1132050:CDS | 40.0% | |
| TCTTGGTGAGATTTGGGAAT+TGG | + | chr7_3:84944465-84944484 | Msa1132050:intron | 40.0% | |
| CTTGGTGAGATTTGGGAATT+GGG | + | chr7_3:84944466-84944485 | Msa1132050:intron | 40.0% | |
| CGTCAATATTTAAGAGACGG+AGG | + | chr7_3:84945117-84945136 | Msa1132050:intron | 40.0% | |
| TGATTTGATAAGTCACGGGT+AGG | - | chr7_3:84945243-84945262 | None:intergenic | 40.0% | |
| GATGATGCCAAGACAATTTG+TGG | + | chr7_3:84945418-84945437 | Msa1132050:intron | 40.0% | |
| TGTCTAAAGACTCCAAATGG+TGG | + | chr7_3:84945473-84945492 | Msa1132050:intron | 40.0% | |
| ! | AGACTCCAAATGGTGGAAAA+TGG | + | chr7_3:84945480-84945499 | Msa1132050:intron | 40.0% |
| TGGCAAGGTATGGTTTGAAA+AGG | + | chr7_3:84945526-84945545 | Msa1132050:intron | 40.0% | |
| GGCAAGGTATGGTTTGAAAA+GGG | + | chr7_3:84945527-84945546 | Msa1132050:intron | 40.0% | |
| AAAACGGTCTCCAATGATCA+AGG | + | chr7_3:84945692-84945711 | Msa1132050:intron | 40.0% | |
| GCTAACTCCTCCTTTGAATT+TGG | + | chr7_3:84945764-84945783 | Msa1132050:intron | 40.0% | |
| GGAAATCACAAAAGGTCCAA+AGG | + | chr7_3:84945810-84945829 | Msa1132050:intron | 40.0% | |
| !! | TTTTCTTGAAGTGTCAAGGG+AGG | + | chr7_3:84945934-84945953 | Msa1132050:intron | 40.0% |
| !! | GGTCTTGATTTTTAGGAACC+TGG | + | chr7_3:84946025-84946044 | Msa1132050:intron | 40.0% |
| ATTGTATCCGAGACCTTAAG+AGG | - | chr7_3:84946366-84946385 | None:intergenic | 40.0% | |
| GTCTCGGATACAATTTACCT+CGG | + | chr7_3:84946372-84946391 | Msa1132050:intron | 40.0% | |
| TGATATCACAAGTGGATGGA+AGG | + | chr7_3:84946661-84946680 | Msa1132050:CDS | 40.0% | |
| TCGAAAGATGTGAACAACGA+AGG | - | chr7_3:84946759-84946778 | None:intergenic | 40.0% | |
| ACATTGAAACACAACACGGA+AGG | - | chr7_3:84947503-84947522 | None:intergenic | 40.0% | |
| GTCGACATTGAAACACAACA+CGG | - | chr7_3:84947507-84947526 | None:intergenic | 40.0% | |
| ! | CGGAATATCGTATTTGGGAT+CGG | + | chr7_3:84947571-84947590 | Msa1132050:intron | 40.0% |
| GGAGATATTGGAAGAAGAAG+AGG | + | chr7_3:84947703-84947722 | Msa1132050:intron | 40.0% | |
| GATATTGGAAGAAGAAGAGG+AGG | + | chr7_3:84947706-84947725 | Msa1132050:intron | 40.0% | |
| AGAAGAGGAGGAAGAAGAAT+AGG | + | chr7_3:84947718-84947737 | Msa1132050:intron | 40.0% | |
| AAGAATAGGAGGAGGATAAC+TGG | + | chr7_3:84947732-84947751 | Msa1132050:intron | 40.0% | |
| AGAATAGGAGGAGGATAACT+GGG | + | chr7_3:84947733-84947752 | Msa1132050:intron | 40.0% | |
| TTGACTGTCGTTCTCATACT+TGG | - | chr7_3:84947819-84947838 | None:intergenic | 40.0% | |
| GAACGCCGCTTATACATAAA+TGG | - | chr7_3:84947842-84947861 | None:intergenic | 40.0% | |
| ! | TGGTTCTGTGTTTAAGAACC+AGG | + | chr7_3:84947865-84947884 | Msa1132050:CDS | 40.0% |
| GCTCATCTTCATCTAAATCG+AGG | - | chr7_3:84948112-84948131 | None:intergenic | 40.0% | |
| !!! | CGCAGAGTTTTTTGAGAGTA+GGG | - | chr7_3:84948136-84948155 | None:intergenic | 40.0% |
| !!! | TCGCAGAGTTTTTTGAGAGT+AGG | - | chr7_3:84948137-84948156 | None:intergenic | 40.0% |
| ! | CGAGTTTGCTTTGAATAAGC+AGG | + | chr7_3:84948154-84948173 | Msa1132050:CDS | 40.0% |
| GCAGTTAAAGAAATACCAGC+AGG | - | chr7_3:84948305-84948324 | None:intergenic | 40.0% | |
| GCTGGTATTTCTTTAACTGC+TGG | + | chr7_3:84948305-84948324 | Msa1132050:CDS | 40.0% | |
| !! | ACTTTTCAAGCAACAGGGAA+AGG | + | chr7_3:84948344-84948363 | Msa1132050:CDS | 40.0% |
| GTCTGGAAAGTTGTTAGATC+AGG | - | chr7_3:84948374-84948393 | None:intergenic | 40.0% | |
| CATCTTGAACTACATGAGTC+TGG | - | chr7_3:84948391-84948410 | None:intergenic | 40.0% | |
| CAGACTCATGTAGTTCAAGA+TGG | + | chr7_3:84948389-84948408 | Msa1132050:CDS | 40.0% | |
| ATTACTAACCATAACCACGG+CGG | - | chr7_3:84948461-84948480 | None:intergenic | 40.0% | |
| GCAGCAGCAAAGTATATGTA+TGG | - | chr7_3:84948513-84948532 | None:intergenic | 40.0% | |
| AAAACAAGCATATCCATGGC+AGG | - | chr7_3:84948603-84948622 | None:intergenic | 40.0% | |
| ! | TGCCATGGATATGCTTGTTT+TGG | + | chr7_3:84948602-84948621 | Msa1132050:CDS | 40.0% |
| !!! | TATGCTTGTTTTGGTTGCGT+TGG | + | chr7_3:84948611-84948630 | Msa1132050:CDS | 40.0% |
| ATGTGATCTTCTTGCCTTTG+TGG | + | chr7_3:84949016-84949035 | Msa1132050:intron | 40.0% | |
| TAGGATTGTCCATTTGAGCT+GGG | - | chr7_3:84949258-84949277 | None:intergenic | 40.0% | |
| TTAGGATTGTCCATTTGAGC+TGG | - | chr7_3:84949259-84949278 | None:intergenic | 40.0% | |
| !! | TGGATGGAAGGCATTTGTAA+AGG | + | chr7_3:84949566-84949585 | Msa1132050:CDS | 40.0% |
| ! | TGGAGATCCATTGAAGGTAC+TGG | + | chr7_3:84944430-84944449 | Msa1132050:CDS | 45.0% |
| TCGATCTCCAGTACCTTCAA+TGG | - | chr7_3:84944440-84944459 | None:intergenic | 45.0% | |
| ! | CTTAAGAGGAGCACACTCTA+AGG | - | chr7_3:84946352-84946371 | None:intergenic | 45.0% |
| CTTAGAGTGTGCTCCTCTTA+AGG | + | chr7_3:84946350-84946369 | Msa1132050:intron | 45.0% | |
| !! | TTACCTCGGTGCAATTTTGG+TGG | + | chr7_3:84946386-84946405 | Msa1132050:intron | 45.0% |
| !! | TACCTCGGTGCAATTTTGGT+GGG | + | chr7_3:84946387-84946406 | Msa1132050:intron | 45.0% |
| !!! | GCAATTTTGGTGGGCTAGTT+TGG | + | chr7_3:84946396-84946415 | Msa1132050:intron | 45.0% |
| ATGAAGGAGTTTGGCCTACT+AGG | + | chr7_3:84946603-84946622 | Msa1132050:CDS | 45.0% | |
| ! | GGCCTACTAGGTTTTCTATC+AGG | + | chr7_3:84946615-84946634 | Msa1132050:CDS | 45.0% |
| TCTATCAGGAAGTCCAGTAC+AGG | + | chr7_3:84946629-84946648 | Msa1132050:CDS | 45.0% | |
| CGTTGTTCACATCTTTCGAG+AGG | + | chr7_3:84946760-84946779 | Msa1132050:CDS | 45.0% | |
| !! | GAGGGGAAAGGTTTGTTACT+GGG | + | chr7_3:84947343-84947362 | Msa1132050:intron | 45.0% |
| !! | AAAGGTTTGTTACTGGGCCT+GGG | + | chr7_3:84947349-84947368 | Msa1132050:intron | 45.0% |
| !!! | CTTTTGGTTTTGGTTTGGGC+TGG | - | chr7_3:84947396-84947415 | None:intergenic | 45.0% |
| ! | TGGGGTGTCCTCGTTTATAT+AGG | + | chr7_3:84947429-84947448 | Msa1132050:intron | 45.0% |
| GAAGGAGGAGGATATCATCT+GGG | + | chr7_3:84947670-84947689 | Msa1132050:intron | 45.0% | |
| GGATATCATCTGGGAGAAGA+AGG | + | chr7_3:84947679-84947698 | Msa1132050:intron | 45.0% | |
| TATCATCTGGGAGAAGAAGG+AGG | + | chr7_3:84947682-84947701 | Msa1132050:intron | 45.0% | |
| GGAGAAGAAGGAGGAGATAT+TGG | + | chr7_3:84947691-84947710 | Msa1132050:intron | 45.0% | |
| AGAGGAGGAAGAAGAATAGG+AGG | + | chr7_3:84947721-84947740 | Msa1132050:intron | 45.0% | |
| GAGGAGGATAACTGGGATAA+GGG | + | chr7_3:84947740-84947759 | Msa1132050:intron | 45.0% | |
| AGGAGGATAACTGGGATAAG+GGG | + | chr7_3:84947741-84947760 | Msa1132050:intron | 45.0% | |
| ATGTATAAGCGGCGTTCTGA+TGG | + | chr7_3:84947845-84947864 | Msa1132050:CDS | 45.0% | |
| CTGTGTTTAAGAACCAGGCT+TGG | + | chr7_3:84947870-84947889 | Msa1132050:CDS | 45.0% | |
| ! | GTTTAAGAACCAGGCTTGGT+TGG | + | chr7_3:84947874-84947893 | Msa1132050:CDS | 45.0% |
| TAAATCGCAACCAGGTGGAT+GGG | - | chr7_3:84948072-84948091 | None:intergenic | 45.0% | |
| TTAAATCGCAACCAGGTGGA+TGG | - | chr7_3:84948073-84948092 | None:intergenic | 45.0% | |
| TTACTAACCATAACCACGGC+GGG | - | chr7_3:84948460-84948479 | None:intergenic | 45.0% | |
| GTTGCGTTGGAAAGACTTGT+AGG | + | chr7_3:84948624-84948643 | Msa1132050:intron | 45.0% | |
| TTGAATAACGCTTGAGGGGA+AGG | + | chr7_3:84949102-84949121 | Msa1132050:intron | 45.0% | |
| TGAATAACGCTTGAGGGGAA+GGG | + | chr7_3:84949103-84949122 | Msa1132050:intron | 45.0% | |
| ! | CAGGGAACAGTTGGTATCAA+CGG | - | chr7_3:84949222-84949241 | None:intergenic | 45.0% |
| ATTGCTCAACAGGGAACAGT+TGG | - | chr7_3:84949231-84949250 | None:intergenic | 45.0% | |
| !! | GGCCTGAAAAGTACTCTATC+AGG | + | chr7_3:84949508-84949527 | Msa1132050:CDS | 45.0% |
| TCTATCAGGAAGACCCGTAA+CGG | + | chr7_3:84949522-84949541 | Msa1132050:CDS | 45.0% | |
| TGAAATCACAGGTGGATGGA+AGG | + | chr7_3:84949554-84949573 | Msa1132050:CDS | 45.0% | |
| !! | TATTATTATTATTTATAACA+AGG | + | chr7_3:84944552-84944571 | Msa1132050:intron | 5.0% |
| !! | TAAATAAATATAAATATGAT+CGG | + | chr7_3:84948661-84948680 | Msa1132050:intron | 5.0% |
| GTCTCAGGTTCGATTCACTC+TGG | + | chr7_3:84944710-84944729 | Msa1132050:intron | 50.0% | |
| TCAGGTTCGATTCACTCTGG+TGG | + | chr7_3:84944713-84944732 | Msa1132050:intron | 50.0% | |
| !! | CGGAGGGAGTATTACTTCAC+AGG | + | chr7_3:84945134-84945153 | Msa1132050:intron | 50.0% |
| ! | GAGCATCACTCTCTAGCTCA+TGG | + | chr7_3:84945566-84945585 | Msa1132050:intron | 50.0% |
| !! | GGAAGGGTACTTTGTCTCCA+AGG | - | chr7_3:84945657-84945676 | None:intergenic | 50.0% |
| CGCATGACAGCAACAAAGGA+TGG | - | chr7_3:84946167-84946186 | None:intergenic | 50.0% | |
| TGCACGCATGACAGCAACAA+AGG | - | chr7_3:84946171-84946190 | None:intergenic | 50.0% | |
| GTGTGCTCCTCTTAAGGTCT+CGG | + | chr7_3:84946356-84946375 | Msa1132050:intron | 50.0% | |
| !! | TGGATGGAAGGCATTTGCAG+AGG | + | chr7_3:84946673-84946692 | Msa1132050:CDS | 50.0% |
| TCAATCCATGTGGAGGGGAA+AGG | + | chr7_3:84947331-84947350 | Msa1132050:intron | 50.0% | |
| ACAAACCTTTCCCCTCCACA+TGG | - | chr7_3:84947339-84947358 | None:intergenic | 50.0% | |
| !! | GGAGGGGAAAGGTTTGTTAC+TGG | + | chr7_3:84947342-84947361 | Msa1132050:intron | 50.0% |
| !! | GAAAGGTTTGTTACTGGGCC+TGG | + | chr7_3:84947348-84947367 | Msa1132050:intron | 50.0% |
| !!! | GCTTTTTTTATGACCCGCCC+AGG | - | chr7_3:84947369-84947388 | None:intergenic | 50.0% |
| TCACGAAGGAGGAGGATAAG+CGG | + | chr7_3:84947639-84947658 | Msa1132050:intron | 50.0% | |
| CGAAGGAGGAGGATATCATC+TGG | + | chr7_3:84947669-84947688 | Msa1132050:intron | 50.0% | |
| GGAGGAAGAAGAATAGGAGG+AGG | + | chr7_3:84947724-84947743 | Msa1132050:intron | 50.0% | |
| GGAGGAGGATAACTGGGATA+AGG | + | chr7_3:84947739-84947758 | Msa1132050:intron | 50.0% | |
| GGAGGATAACTGGGATAAGG+GGG | + | chr7_3:84947742-84947761 | Msa1132050:intron | 50.0% | |
| CTCTCTCGCGATCTAAGTGT+AGG | + | chr7_3:84947929-84947948 | Msa1132050:intron | 50.0% | |
| CCAGTTAAATCGCAACCAGG+TGG | - | chr7_3:84948077-84948096 | None:intergenic | 50.0% | |
| CCACCTGGTTGCGATTTAAC+TGG | + | chr7_3:84948074-84948093 | Msa1132050:CDS | 50.0% | |
| CTGCCAGTTAAATCGCAACC+AGG | - | chr7_3:84948080-84948099 | None:intergenic | 50.0% | |
| TACTAACCATAACCACGGCG+GGG | - | chr7_3:84948459-84948478 | None:intergenic | 50.0% | |
| ! | ATCAAGGGTTAGGGGCATAC+CGG | - | chr7_3:84948555-84948574 | None:intergenic | 50.0% |
| GGCAGGTAGATTCCTGCAAA+AGG | - | chr7_3:84948586-84948605 | None:intergenic | 50.0% | |
| TTGCAGGAATCTACCTGCCA+TGG | + | chr7_3:84948587-84948606 | Msa1132050:intron | 50.0% | |
| CTGGGCACAATTGCTCAACA+GGG | - | chr7_3:84949240-84949259 | None:intergenic | 50.0% | |
| GCAATTGTGCCCAGCTCAAA+TGG | + | chr7_3:84949246-84949265 | Msa1132050:intron | 50.0% | |
| AGCCCACCAAAATTGCACCG+AGG | - | chr7_3:84946392-84946411 | None:intergenic | 55.0% | |
| GGATAAGCGGGACTTCACGA+AGG | + | chr7_3:84947625-84947644 | Msa1132050:intron | 55.0% | |
| TAAGCGGGACTTCACGAAGG+AGG | + | chr7_3:84947628-84947647 | Msa1132050:intron | 55.0% | |
| CACGAAGGAGGAGGATAAGC+GGG | + | chr7_3:84947640-84947659 | Msa1132050:intron | 55.0% | |
| GGATAAGCGGGACTTCACGA+AGG | + | chr7_3:84947625-84947644 | Msa1132050:intron | 55.0% | |
| TAAGCGGGACTTCACGAAGG+AGG | + | chr7_3:84947628-84947647 | Msa1132050:intron | 55.0% | |
| GTCAAGTGTACCCATCCTGC+TGG | + | chr7_3:84948287-84948306 | Msa1132050:CDS | 55.0% | |
| AAACCTAATACACCCCGCCG+TGG | + | chr7_3:84948444-84948463 | Msa1132050:intron | 55.0% | |
| TAACCACGGCGGGGTGTATT+AGG | - | chr7_3:84948450-84948469 | None:intergenic | 55.0% | |
| AATACACCCCGCCGTGGTTA+TGG | + | chr7_3:84948450-84948469 | Msa1132050:intron | 55.0% | |
| GCTGGGCACAATTGCTCAAC+AGG | - | chr7_3:84949241-84949260 | None:intergenic | 55.0% | |
| !! | GGTTTGTTACTGGGCCTGGG+CGG | + | chr7_3:84947352-84947371 | Msa1132050:intron | 60.0% |
| ! | GTTTGTTACTGGGCCTGGGC+GGG | + | chr7_3:84947353-84947372 | Msa1132050:intron | 60.0% |
| CCTCACGATCCAACCAAGCC+TGG | - | chr7_3:84947886-84947905 | None:intergenic | 60.0% | |
| ! | CCAGGCTTGGTTGGATCGTG+AGG | + | chr7_3:84947883-84947902 | Msa1132050:CDS | 60.0% |
| GATGCTATCGCCCATCCACC+TGG | + | chr7_3:84948059-84948078 | Msa1132050:CDS | 60.0% | |
| GCGGGACTTCACGAAGGAGG+AGG | + | chr7_3:84947631-84947650 | Msa1132050:intron | 65.0% | |
| GCGGGACTTCACGAAGGAGG+AGG | + | chr7_3:84947631-84947650 | Msa1132050:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 84944412 | 84949725 | 84944412 | ID=Msa1132050;Name=Msa1132050 |
| chr7_3 | mRNA | 84944412 | 84949725 | 84944412 | ID=Msa1132050-mRNA-1;Parent=Msa1132050;Name=Msa1132050-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|0.75|1|1|8|0|432 |
| chr7_3 | exon | 84944412 | 84944469 | 84944412 | ID=Msa1132050-mRNA-1:exon:25302;Parent=Msa1132050-mRNA-1 |
| chr7_3 | exon | 84946093 | 84946217 | 84946093 | ID=Msa1132050-mRNA-1:exon:25303;Parent=Msa1132050-mRNA-1 |
| chr7_3 | exon | 84946524 | 84946818 | 84946524 | ID=Msa1132050-mRNA-1:exon:25304;Parent=Msa1132050-mRNA-1 |
| chr7_3 | exon | 84947777 | 84947946 | 84947777 | ID=Msa1132050-mRNA-1:exon:25305;Parent=Msa1132050-mRNA-1 |
| chr7_3 | exon | 84948053 | 84948175 | 84948053 | ID=Msa1132050-mRNA-1:exon:25306;Parent=Msa1132050-mRNA-1 |
| chr7_3 | exon | 84948260 | 84948432 | 84948260 | ID=Msa1132050-mRNA-1:exon:25307;Parent=Msa1132050-mRNA-1 |
| chr7_3 | exon | 84948593 | 84948641 | 84948593 | ID=Msa1132050-mRNA-1:exon:25308;Parent=Msa1132050-mRNA-1 |
| chr7_3 | exon | 84949420 | 84949725 | 84949420 | ID=Msa1132050-mRNA-1:exon:25309;Parent=Msa1132050-mRNA-1 |
| chr7_3 | CDS | 84944412 | 84944469 | 84944412 | ID=Msa1132050-mRNA-1:cds;Parent=Msa1132050-mRNA-1 |
| chr7_3 | CDS | 84946093 | 84946217 | 84946093 | ID=Msa1132050-mRNA-1:cds;Parent=Msa1132050-mRNA-1 |
| chr7_3 | CDS | 84946524 | 84946818 | 84946524 | ID=Msa1132050-mRNA-1:cds;Parent=Msa1132050-mRNA-1 |
| chr7_3 | CDS | 84947777 | 84947946 | 84947777 | ID=Msa1132050-mRNA-1:cds;Parent=Msa1132050-mRNA-1 |
| chr7_3 | CDS | 84948053 | 84948175 | 84948053 | ID=Msa1132050-mRNA-1:cds;Parent=Msa1132050-mRNA-1 |
| chr7_3 | CDS | 84948260 | 84948432 | 84948260 | ID=Msa1132050-mRNA-1:cds;Parent=Msa1132050-mRNA-1 |
| chr7_3 | CDS | 84948593 | 84948641 | 84948593 | ID=Msa1132050-mRNA-1:cds;Parent=Msa1132050-mRNA-1 |
| chr7_3 | CDS | 84949420 | 84949725 | 84949420 | ID=Msa1132050-mRNA-1:cds;Parent=Msa1132050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
