Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136250 | XP_003621272.1 | 98.510 | 537 | 6 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1092 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136250 | sp|P55217|CGS1_ARATH | 79.753 | 405 | 81 | 1 | 133 | 537 | 160 | 563 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136250 | G7L227 | 98.510 | 537 | 6 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1092 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1049030 | Msa1136250 | 0.813718 | 2.221667e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136250 | MtrunA17_Chr7g0217761 | 98.510 | 537 | 6 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1092 |
| Msa1136250 | MtrunA17_Chr6g0453481 | 76.108 | 406 | 95 | 2 | 132 | 537 | 74 | 477 | 0.0 | 656 |
| Msa1136250 | MtrunA17_Chr1g0181151 | 36.283 | 339 | 212 | 4 | 198 | 535 | 129 | 464 | 3.96e-69 | 229 |
| Msa1136250 | MtrunA17_Chr3g0119851 | 29.940 | 334 | 217 | 8 | 198 | 519 | 92 | 420 | 2.40e-39 | 149 |
| Msa1136250 | MtrunA17_Chr1g0189071 | 28.743 | 334 | 222 | 8 | 198 | 519 | 93 | 422 | 3.68e-36 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136250 | AT3G01120.1 | 79.753 | 405 | 81 | 1 | 133 | 537 | 160 | 563 | 0.0 | 686 |
| Msa1136250 | AT1G33320.1 | 69.554 | 381 | 115 | 1 | 157 | 537 | 33 | 412 | 0.0 | 559 |
| Msa1136250 | AT1G33320.2 | 70.161 | 372 | 110 | 1 | 166 | 537 | 3 | 373 | 0.0 | 552 |
| Msa1136250 | AT1G33320.3 | 70.642 | 327 | 95 | 1 | 211 | 537 | 3 | 328 | 8.48e-172 | 488 |
| Msa1136250 | AT3G57050.4 | 34.795 | 365 | 226 | 6 | 167 | 530 | 46 | 399 | 2.09e-69 | 229 |
| Msa1136250 | AT3G57050.5 | 34.795 | 365 | 226 | 6 | 167 | 530 | 24 | 377 | 2.22e-69 | 228 |
| Msa1136250 | AT3G57050.2 | 34.795 | 365 | 226 | 6 | 167 | 530 | 87 | 440 | 5.78e-69 | 229 |
| Msa1136250 | AT3G57050.1 | 34.795 | 365 | 226 | 6 | 167 | 530 | 102 | 455 | 6.17e-69 | 229 |
| Msa1136250 | AT3G57050.3 | 34.397 | 282 | 174 | 5 | 167 | 447 | 102 | 373 | 1.24e-50 | 178 |
| Msa1136250 | AT1G64660.1 | 29.429 | 333 | 221 | 7 | 198 | 519 | 93 | 422 | 3.64e-39 | 148 |
Find 190 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGGCAGATGACTGGTTT+TGG | 0.206527 | 7_4:+4540024 | Msa1136250:CDS |
| ATTAATTCCTTGAACTGATT+TGG | 0.218651 | 7_4:+4541337 | Msa1136250:three_prime_UTR |
| GATGGCGATGTCGTCGAAAA+TGG | 0.220327 | 7_4:+4536351 | Msa1136250:CDS |
| GTGGAAGATTTATGACAATT+TGG | 0.239016 | 7_4:+4541139 | Msa1136250:CDS |
| TTGATTATGGCTTATTTGTT+GGG | 0.263165 | 7_4:-4541554 | None:intergenic |
| CGTCAAACTAGTTATGAATA+TGG | 0.263385 | 7_4:+4537642 | Msa1136250:CDS |
| CAGATACACGCAGCAAATAC+TGG | 0.264776 | 7_4:-4541309 | None:intergenic |
| GCTGAGTTGACGTTGGAAAT+TGG | 0.265209 | 7_4:-4536145 | None:intergenic |
| TTCACATTCATTTCATCATT+TGG | 0.278874 | 7_4:+4535879 | None:intergenic |
| TGGGAGGAAAACGGAGGATT+GGG | 0.280235 | 7_4:-4536125 | None:intergenic |
| TTTGATTATGGCTTATTTGT+TGG | 0.285879 | 7_4:-4541555 | None:intergenic |
| TTCTTTCTGGTTCAGGTACT+TGG | 0.288738 | 7_4:+4538835 | Msa1136250:intron |
| CACCAAGGGCAAGGGCCTTC+TGG | 0.291162 | 7_4:-4538688 | None:intergenic |
| TAGCCTTAGATCTTTGATTA+TGG | 0.297456 | 7_4:-4541567 | None:intergenic |
| CCTTGCCCTTGGTGCTGATT+TGG | 0.297489 | 7_4:+4538697 | Msa1136250:CDS |
| TTAATTCCTTGAACTGATTT+GGG | 0.303748 | 7_4:+4541338 | Msa1136250:three_prime_UTR |
| CATACCTTGATCCCCATCTT+TGG | 0.307990 | 7_4:-4537963 | None:intergenic |
| CAACCCAACCAGTACTGTTT+TGG | 0.308335 | 7_4:+4537674 | Msa1136250:CDS |
| AATAATGAATAGTGCCTATA+TGG | 0.313919 | 7_4:-4541228 | None:intergenic |
| TGGAGCCTTGCAATCTGCTT+TGG | 0.315672 | 7_4:+4538437 | Msa1136250:CDS |
| TGGGGAGGAGATGGCGGCGG+CGG | 0.319848 | 7_4:-4536106 | None:intergenic |
| CCATACATTGCTGCCTCATT+TGG | 0.325657 | 7_4:+4540214 | Msa1136250:CDS |
| CACTTCAACATTACAATCAT+AGG | 0.326473 | 7_4:-4541472 | None:intergenic |
| TGACTACTACTGATTGTTAC+AGG | 0.328186 | 7_4:+4537910 | Msa1136250:CDS |
| CAGAACTTTGCCACAAGAAT+GGG | 0.332287 | 7_4:+4538624 | Msa1136250:CDS |
| GGAGGAGATGGCGGCGGCGG+AGG | 0.341122 | 7_4:-4536103 | None:intergenic |
| CACTTGGCCCTTTCTGATGC+AGG | 0.349298 | 7_4:-4541119 | None:intergenic |
| TTTGAAGGCTGATGTCTTGC+AGG | 0.352504 | 7_4:+4541196 | Msa1136250:CDS |
| TCAACTATCTTGATGGCATC+TGG | 0.354904 | 7_4:+4537831 | Msa1136250:CDS |
| GGATGGAAGGGAGGTGAAAT+CGG | 0.370397 | 7_4:-4536028 | None:intergenic |
| AAGTTTGGCCATCCTCATTC+CGG | 0.375018 | 7_4:-4539385 | None:intergenic |
| ATGGCGATGTCGTCGAAAAT+GGG | 0.377789 | 7_4:+4536352 | Msa1136250:CDS |
| CCAAATGAGGCAGCAATGTA+TGG | 0.378795 | 7_4:-4540214 | None:intergenic |
| AAGCCATAATCAAAGATCTA+AGG | 0.379390 | 7_4:+4541564 | Msa1136250:three_prime_UTR |
| GGAAATGACGACGGCGGTTA+TGG | 0.380534 | 7_4:-4536065 | None:intergenic |
| TGAGTACCAGTAAGACAAAA+TGG | 0.381061 | 7_4:-4540266 | None:intergenic |
| AACCAGAAGGCCCTTGCCCT+TGG | 0.386207 | 7_4:+4538686 | Msa1136250:CDS |
| GGGAACCCCAGCGGTTTCGC+TGG | 0.391110 | 7_4:+4536243 | Msa1136250:CDS |
| GGGATGTGCCTCTAAAAGTT+TGG | 0.394303 | 7_4:-4539400 | None:intergenic |
| CTGAGTTGACGTTGGAAATT+GGG | 0.394633 | 7_4:-4536144 | None:intergenic |
| TTGCCTATAATGCAGATTGA+TGG | 0.397473 | 7_4:+4540148 | Msa1136250:intron |
| GGAACCCCAGCGGTTTCGCT+GGG | 0.398550 | 7_4:+4536244 | Msa1136250:CDS |
| CATTCATTTCATCATTTGGT+TGG | 0.399205 | 7_4:+4535883 | None:intergenic |
| TTGGGAGGAAAACGGAGGAT+TGG | 0.403682 | 7_4:-4536126 | None:intergenic |
| GCGGAGGCGAGGGAGGTTGT+TGG | 0.412095 | 7_4:-4536087 | None:intergenic |
| ATGATTGCGTAATGATGTAT+TGG | 0.413767 | 7_4:+4541408 | Msa1136250:three_prime_UTR |
| GGCTGATGTCTTGCAGGCAC+TGG | 0.415737 | 7_4:+4541202 | Msa1136250:CDS |
| GGGGCTTTGCTCGTCATTGA+TGG | 0.416380 | 7_4:+4538644 | Msa1136250:CDS |
| TACATTGCTGCCTCATTTGG+TGG | 0.417188 | 7_4:+4540217 | Msa1136250:CDS |
| CTCATGGCAAGCTCATGTTC+AGG | 0.417754 | 7_4:-4540006 | None:intergenic |
| AATTTGGTTCGATTCAGCTT+TGG | 0.422581 | 7_4:+4541155 | Msa1136250:CDS |
| CGGAGGCGAGGGAGGTTGTT+GGG | 0.425645 | 7_4:-4536086 | None:intergenic |
| TCGTGGTCTAACGAAGGAAC+TGG | 0.425978 | 7_4:+4536222 | Msa1136250:CDS |
| CACAAATCGTCGCTGCTTCG+TGG | 0.427715 | 7_4:+4536205 | Msa1136250:CDS |
| GGTTGTTGTCGGTGGATGGA+AGG | 0.432338 | 7_4:-4536041 | None:intergenic |
| GCAGGCACTGGAAGCCATAT+AGG | 0.435135 | 7_4:+4541214 | Msa1136250:CDS |
| TCAGAACTTTGCCACAAGAA+TGG | 0.438377 | 7_4:+4538623 | Msa1136250:CDS |
| GGCTGAGTCAACTATCTTGA+TGG | 0.438443 | 7_4:+4537824 | Msa1136250:CDS |
| GCTGCAGTTACGACGCGCTT+TGG | 0.438927 | 7_4:-4536169 | None:intergenic |
| TCATTATTGAATCAGTGAAC+TGG | 0.440444 | 7_4:+4537797 | Msa1136250:intron |
| GCGGTTATGGTGGTTGTTGT+CGG | 0.441825 | 7_4:-4536052 | None:intergenic |
| GGGAGGAAAACGGAGGATTG+GGG | 0.442254 | 7_4:-4536124 | None:intergenic |
| AGAGACTGTTCTTCCAAAGA+TGG | 0.448366 | 7_4:+4537950 | Msa1136250:CDS |
| TCAGGATGACTTGGCAAGCC+TGG | 0.449767 | 7_4:-4539988 | None:intergenic |
| TTTCGCTGGGGTTCCGACTC+CGG | 0.450022 | 7_4:+4536257 | Msa1136250:CDS |
| CATAGTCTTGCTGATGGCGC+TGG | 0.451246 | 7_4:+4537866 | Msa1136250:CDS |
| GATGGAAGGGAGGTGAAATC+GGG | 0.452446 | 7_4:-4536027 | None:intergenic |
| CCTCCAAAACAGTACTGGTT+GGG | 0.455886 | 7_4:-4537677 | None:intergenic |
| TGGTGGTTGTTGTCGGTGGA+TGG | 0.457172 | 7_4:-4536045 | None:intergenic |
| TGATTGCGTAATGATGTATT+GGG | 0.466351 | 7_4:+4541409 | Msa1136250:three_prime_UTR |
| GTCAAACTAGTTATGAATAT+GGG | 0.469406 | 7_4:+4537643 | Msa1136250:CDS |
| AGATGGCGGCGGCGGAGGCG+AGG | 0.473883 | 7_4:-4536098 | None:intergenic |
| CTTCTCCTCCAAAACAGTAC+TGG | 0.475513 | 7_4:-4537682 | None:intergenic |
| TTGGTTGGTGTAGAGGAAGT+AGG | 0.476270 | 7_4:+4535898 | Msa1136250:five_prime_UTR |
| GAGGATTGGGGAGGAGATGG+CGG | 0.478026 | 7_4:-4536112 | None:intergenic |
| ACGGAGGATTGGGGAGGAGA+TGG | 0.478713 | 7_4:-4536115 | None:intergenic |
| GTGAAGTGTGTCTACTATCC+AGG | 0.480879 | 7_4:+4539970 | Msa1136250:CDS |
| GATGGCGGCGGCGGAGGCGA+GGG | 0.482598 | 7_4:-4536097 | None:intergenic |
| TTTCTGGTTCAGGTACTTGG+TGG | 0.484362 | 7_4:+4538838 | Msa1136250:intron |
| TGAATCAATAAATTTAATTG+TGG | 0.490973 | 7_4:-4540182 | None:intergenic |
| GAGACTGTTCTTCCAAAGAT+GGG | 0.491918 | 7_4:+4537951 | Msa1136250:CDS |
| GTACTTGGTGGTTGCATCAG+TGG | 0.493649 | 7_4:+4538850 | Msa1136250:CDS |
| TGGGGTTCCGACTCCGGTGC+CGG | 0.494956 | 7_4:+4536263 | Msa1136250:CDS |
| GTTGTTGTCGGTGGATGGAA+GGG | 0.495764 | 7_4:-4536040 | None:intergenic |
| AGGAAAACGGAGGATTGGGG+AGG | 0.496197 | 7_4:-4536121 | None:intergenic |
| TGCAAGGCTCCAACATCAGC+AGG | 0.497319 | 7_4:-4538426 | None:intergenic |
| GATTGGGGAGGAGATGGCGG+CGG | 0.497453 | 7_4:-4536109 | None:intergenic |
| TGATTATGGCTTATTTGTTG+GGG | 0.499013 | 7_4:-4541553 | None:intergenic |
| AGAACACCCAAATCAGTTCA+AGG | 0.499699 | 7_4:-4541344 | None:intergenic |
| GGCGGCGGCGGAGGCGAGGG+AGG | 0.501678 | 7_4:-4536094 | None:intergenic |
| CGGAACCCCAGCGAAACCGC+TGG | 0.507188 | 7_4:-4536250 | None:intergenic |
| AGCTCATGTTCAGGATGACT+TGG | 0.511225 | 7_4:-4539997 | None:intergenic |
| GTACAGCAACAGAATTCAAC+CGG | 0.512244 | 7_4:+4539366 | Msa1136250:CDS |
| CAACTATCTTGATGGCATCT+GGG | 0.519100 | 7_4:+4537832 | Msa1136250:CDS |
| ATGGCGCTGGTTCCAGCCGG+TGG | 0.519978 | 7_4:+4537879 | Msa1136250:CDS |
| TCCTCCAAAACAGTACTGGT+TGG | 0.520178 | 7_4:-4537678 | None:intergenic |
| TCATCATTTGGTTGGTGTAG+AGG | 0.521132 | 7_4:+4535891 | Msa1136250:five_prime_UTR |
| TGGCTCTTTGAAGTTGATCT+CGG | 0.521731 | 7_4:+4538870 | Msa1136250:CDS |
| CTGATGGCGCTGGTTCCAGC+CGG | 0.524673 | 7_4:+4537876 | Msa1136250:CDS |
| CTGATTGTTACAGGAAGACT+AGG | 0.526898 | 7_4:+4537919 | Msa1136250:CDS |
| TCTTCCAAAGATGGGGATCA+AGG | 0.529385 | 7_4:+4537959 | Msa1136250:CDS |
| GTCACAAGATGTCCACCGGC+TGG | 0.532380 | 7_4:-4537891 | None:intergenic |
| GTTATGGTGGTTGTTGTCGG+TGG | 0.536839 | 7_4:-4536049 | None:intergenic |
| GTTGTCGGTGGATGGAAGGG+AGG | 0.538750 | 7_4:-4536037 | None:intergenic |
| GACATCGCCATCGGCGACAT+CGG | 0.538785 | 7_4:-4536340 | None:intergenic |
| GCTTAATGTCAACACATCTC+AGG | 0.544187 | 7_4:-4538595 | None:intergenic |
| TTGAATCAGTGAACTGGAAG+GGG | 0.544987 | 7_4:+4537803 | Msa1136250:intron |
| GGACCTTCCTGCATCAGAAA+GGG | 0.545206 | 7_4:+4541112 | Msa1136250:CDS |
| GGTGTAGAGGAAGTAGGTGT+AGG | 0.546764 | 7_4:+4535904 | Msa1136250:five_prime_UTR |
| GGAACCCCAGCGAAACCGCT+GGG | 0.547663 | 7_4:-4536249 | None:intergenic |
| GGGACCTTCCTGCATCAGAA+AGG | 0.547983 | 7_4:+4541111 | Msa1136250:intron |
| CCAAATCAGCACCAAGGGCA+AGG | 0.548480 | 7_4:-4538697 | None:intergenic |
| CATCTCAGGAATGGATTGGT+AGG | 0.550373 | 7_4:-4538581 | None:intergenic |
| CTTGCCATGAGGCAGATGAC+TGG | 0.550800 | 7_4:+4540018 | Msa1136250:CDS |
| GCAAGGGCCTTCTGGTTCAA+AGG | 0.551371 | 7_4:-4538680 | None:intergenic |
| TGGCCCTTTCTGATGCAGGA+AGG | 0.552383 | 7_4:-4541115 | None:intergenic |
| GCAACAGCCGGCACCGGAGT+CGG | 0.552476 | 7_4:-4536270 | None:intergenic |
| AGTTATGAATATGGGCGCTA+TGG | 0.552948 | 7_4:+4537651 | Msa1136250:CDS |
| TATTATGCAGCTGAGAGACT+TGG | 0.553724 | 7_4:+4537055 | Msa1136250:intron |
| TTTGGGCGGTGCTCTTAACC+CGG | 0.553808 | 7_4:+4538915 | Msa1136250:CDS |
| GAGATGTGTTGACATTAAGC+TGG | 0.555073 | 7_4:+4538598 | Msa1136250:CDS |
| TCAACAGCAGATGCAACAGC+CGG | 0.555637 | 7_4:-4536282 | None:intergenic |
| ATGTCAACACATCTCAGGAA+TGG | 0.560252 | 7_4:-4538590 | None:intergenic |
| TGTTGATGCAACAACTGCTC+CGG | 0.561064 | 7_4:+4536299 | Msa1136250:CDS |
| GTTGGAAATTGGGAGGAAAA+CGG | 0.561987 | 7_4:-4536134 | None:intergenic |
| ATCTGCTTTGGAGCAGAACA+AGG | 0.562254 | 7_4:+4538449 | Msa1136250:CDS |
| GCAGATGCAACAGCCGGCAC+CGG | 0.566723 | 7_4:-4536276 | None:intergenic |
| AACGCGGTGGAAACTTGAAA+CGG | 0.568103 | 7_4:-4535980 | None:intergenic |
| AACACATCTCAGGAATGGAT+TGG | 0.568381 | 7_4:-4538585 | None:intergenic |
| CTGCTCCAAAGCAGATTGCA+AGG | 0.570077 | 7_4:-4538442 | None:intergenic |
| GCGTCGAGGTCTAACGGCAC+CGG | 0.570945 | 7_4:-4536318 | None:intergenic |
| AACAGAATTCAACCGGAATG+AGG | 0.571836 | 7_4:+4539373 | Msa1136250:CDS |
| CAAATGAGGCAGCAATGTAT+GGG | 0.573186 | 7_4:-4540213 | None:intergenic |
| TACCAGTAAGACAAAATGGC+TGG | 0.573561 | 7_4:-4540262 | None:intergenic |
| CGTCGTAACTGCAGCAACAT+CGG | 0.574560 | 7_4:+4536177 | Msa1136250:CDS |
| CTTTGGTGCTGAGTTGACGT+TGG | 0.575034 | 7_4:-4536152 | None:intergenic |
| CAAATCAGCACCAAGGGCAA+GGG | 0.575071 | 7_4:-4538696 | None:intergenic |
| GTGGTTGATCCTGCTGATGT+TGG | 0.576280 | 7_4:+4538417 | Msa1136250:CDS |
| GCTCTCACAGCCACCAAATG+AGG | 0.577161 | 7_4:-4540227 | None:intergenic |
| TAGGCAGAAGTGTTCACCAC+AGG | 0.578051 | 7_4:-4537109 | None:intergenic |
| AGATACACGCAGCAAATACT+GGG | 0.579391 | 7_4:-4541308 | None:intergenic |
| CGTGGTCTAACGAAGGAACT+GGG | 0.581589 | 7_4:+4536223 | Msa1136250:CDS |
| AAGGGAGGTGAAATCGGGAT+CGG | 0.583036 | 7_4:-4536022 | None:intergenic |
| ACATCGGCGTCGAGGTCTAA+CGG | 0.585435 | 7_4:-4536324 | None:intergenic |
| ATTGAATCAGTGAACTGGAA+GGG | 0.588819 | 7_4:+4537802 | Msa1136250:intron |
| GCAAGCAAAACGATTCATGC+TGG | 0.589033 | 7_4:+4536423 | Msa1136250:CDS |
| TGCAGCTGAGAGACTTGGTA+GGG | 0.591730 | 7_4:+4537060 | Msa1136250:intron |
| TGCTACGCCTTTGAACCAGA+AGG | 0.592523 | 7_4:+4538673 | Msa1136250:CDS |
| GAATGGATTGGTAGGAGACT+CGG | 0.593229 | 7_4:-4538573 | None:intergenic |
| GAATTCAACCGGAATGAGGA+TGG | 0.593368 | 7_4:+4539377 | Msa1136250:CDS |
| CGAGCAAAGCCCCATTCTTG+TGG | 0.593385 | 7_4:-4538634 | None:intergenic |
| CATAACCAAATCAGCACCAA+GGG | 0.599807 | 7_4:-4538702 | None:intergenic |
| AGGTGAAATCGGGATCGGAA+CGG | 0.600745 | 7_4:-4536017 | None:intergenic |
| GTATTTGCTGCGTGTATCTG+CGG | 0.603788 | 7_4:+4541312 | Msa1136250:three_prime_UTR |
| ATGCAGCTGAGAGACTTGGT+AGG | 0.605179 | 7_4:+4537059 | Msa1136250:intron |
| TATTGAATCAGTGAACTGGA+AGG | 0.608896 | 7_4:+4537801 | Msa1136250:intron |
| TGGTGGCTGTGAGAGCATTG+TGG | 0.610822 | 7_4:+4540234 | Msa1136250:CDS |
| GGTAGGGCTATTGTGACTGA+TGG | 0.611008 | 7_4:+4537076 | Msa1136250:CDS |
| AGTAGTCACAAGATGTCCAC+CGG | 0.611288 | 7_4:-4537895 | None:intergenic |
| CTCGACGCCGATGTCGCCGA+TGG | 0.612253 | 7_4:+4536333 | Msa1136250:CDS |
| TGCTAGCATAGTCTTGCTGA+TGG | 0.614200 | 7_4:+4537860 | Msa1136250:CDS |
| AAAACCAGTCATCTGCCTCA+TGG | 0.617037 | 7_4:-4540022 | None:intergenic |
| AATGACGACGGCGGTTATGG+TGG | 0.618009 | 7_4:-4536062 | None:intergenic |
| AAAACGAAGAATAAGAACTA+CGG | 0.621949 | 7_4:-4536389 | None:intergenic |
| AGAACTTTGCCACAAGAATG+GGG | 0.622700 | 7_4:+4538625 | Msa1136250:CDS |
| CCTTATTGAGCAGACATCCG+TGG | 0.625339 | 7_4:+4538398 | Msa1136250:intron |
| GGGATCGGAACGGCATTCGA+AGG | 0.627492 | 7_4:-4536007 | None:intergenic |
| TGGCGATGTCGTCGAAAATG+GGG | 0.634408 | 7_4:+4536353 | Msa1136250:CDS |
| AGTTGACGTTGGAAATTGGG+AGG | 0.639123 | 7_4:-4536141 | None:intergenic |
| CACTCTTGTACGAAGTACAT+CGG | 0.640138 | 7_4:+4538725 | Msa1136250:CDS |
| ATTGTCATAAATCTTCCACT+TGG | 0.643061 | 7_4:-4541135 | None:intergenic |
| AGAAGTGTTCACCACAGGAG+TGG | 0.645583 | 7_4:-4537104 | None:intergenic |
| CTGCATCAGAAAGGGCCAAG+TGG | 0.649606 | 7_4:+4541120 | Msa1136250:CDS |
| GAACCCCAGCGGTTTCGCTG+GGG | 0.651304 | 7_4:+4536245 | Msa1136250:CDS |
| AGACTGTTCTTCCAAAGATG+GGG | 0.658293 | 7_4:+4537952 | Msa1136250:CDS |
| CATCGGCGACATCGGCGTCG+AGG | 0.660124 | 7_4:-4536332 | None:intergenic |
| GCTGCATACCTATTCATCAG+AGG | 0.677803 | 7_4:+4539321 | Msa1136250:CDS |
| AGGTTGTTGGGAAATGACGA+CGG | 0.687100 | 7_4:-4536074 | None:intergenic |
| GAACCCCAGCGAAACCGCTG+GGG | 0.687208 | 7_4:-4536248 | None:intergenic |
| GCATAACCAAATCAGCACCA+AGG | 0.689976 | 7_4:-4538703 | None:intergenic |
| TGATGGAATTACCACTCCTG+TGG | 0.690564 | 7_4:+4537093 | Msa1136250:CDS |
| AACATCAGCAGGATCAACCA+CGG | 0.691119 | 7_4:-4538415 | None:intergenic |
| TCTTGTACGAAGTACATCGG+TGG | 0.698870 | 7_4:+4538728 | Msa1136250:CDS |
| GCTGCTTCGTGGTCTAACGA+AGG | 0.711233 | 7_4:+4536216 | Msa1136250:CDS |
| CTGAACATGAGCTTGCCATG+AGG | 0.711855 | 7_4:+4540007 | Msa1136250:CDS |
| GGAAATTGGGAGGAAAACGG+AGG | 0.714797 | 7_4:-4536131 | None:intergenic |
| GGCATTCGAAGGTGAAAACG+CGG | 0.732442 | 7_4:-4535996 | None:intergenic |
| GAAGGAACTGGGAACCCCAG+CGG | 0.744461 | 7_4:+4536234 | Msa1136250:CDS |
| ATTCGAAGGTGAAAACGCGG+TGG | 0.746724 | 7_4:-4535993 | None:intergenic |
| TTGTTGGGAAATGACGACGG+CGG | 0.820785 | 7_4:-4536071 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTAAAAAAAAAAA+AGG | - | chr7_4:4540753-4540772 | None:intergenic | 0.0% |
| !!! | TAATTTTAATTTCAAAGATT+AGG | + | chr7_4:4536554-4536573 | Msa1136250:intron | 10.0% |
| !!! | TACTTTTTATTTTATCTTTT+TGG | + | chr7_4:4537170-4537189 | Msa1136250:intron | 10.0% |
| !!! | TTGAAATTTTTCTTATATTA+AGG | + | chr7_4:4539214-4539233 | Msa1136250:intron | 10.0% |
| !!! | TAATAATAAGTGTTATTATA+AGG | + | chr7_4:4539535-4539554 | Msa1136250:intron | 10.0% |
| !! | CAATAATTCAAATAAAAAAA+AGG | - | chr7_4:4539841-4539860 | None:intergenic | 10.0% |
| !!! | ATTATTTACTTTTTTACATT+TGG | + | chr7_4:4540821-4540840 | Msa1136250:intron | 10.0% |
| !!! | TTATTTACTTTTTTACATTT+GGG | + | chr7_4:4540822-4540841 | Msa1136250:intron | 10.0% |
| !!! | TTTTTTTTAAACAATAATCT+AGG | + | chr7_4:4541522-4541541 | Msa1136250:three_prime_UTR | 10.0% |
| !!! | TTTTTTTAAACAATAATCTA+GGG | + | chr7_4:4541523-4541542 | Msa1136250:three_prime_UTR | 10.0% |
| !!! | AAAGATTAGGTTAATTTTAT+CGG | + | chr7_4:4536567-4536586 | Msa1136250:intron | 15.0% |
| !!! | AATTTATATGCTTTTAGTTT+AGG | + | chr7_4:4536806-4536825 | Msa1136250:intron | 15.0% |
| !!! | ATTTATATGCTTTTAGTTTA+GGG | + | chr7_4:4536807-4536826 | Msa1136250:intron | 15.0% |
| !!! | GAATATAATTTTTAGAAAGT+GGG | + | chr7_4:4536829-4536848 | Msa1136250:intron | 15.0% |
| !! | ATATATCCATTTCAAATATT+GGG | - | chr7_4:4538272-4538291 | None:intergenic | 15.0% |
| !!! | AAAAATTTCAAAAGAAGTTT+TGG | - | chr7_4:4539205-4539224 | None:intergenic | 15.0% |
| !!! | TATTTTAAAGACAAACAAAA+TGG | + | chr7_4:4539627-4539646 | Msa1136250:intron | 15.0% |
| !!! | CTTTTTTAATATTAACCTTT+GGG | + | chr7_4:4539760-4539779 | Msa1136250:intron | 15.0% |
| !! | TGAATCAATAAATTTAATTG+TGG | - | chr7_4:4540185-4540204 | None:intergenic | 15.0% |
| !! | AAAGTGGAAAAAAAAAATAA+AGG | - | chr7_4:4540957-4540976 | None:intergenic | 15.0% |
| !!! | TATGACTTGTTTTTGTTTTT+TGG | + | chr7_4:4536627-4536646 | Msa1136250:intron | 20.0% |
| !! | AATTTCATATGCTAAAAAGT+TGG | + | chr7_4:4536762-4536781 | Msa1136250:intron | 20.0% |
| !!! | GGAATATAATTTTTAGAAAG+TGG | + | chr7_4:4536828-4536847 | Msa1136250:intron | 20.0% |
| !! | TGGGTATCTAATAAAAAAAT+TGG | + | chr7_4:4536848-4536867 | Msa1136250:intron | 20.0% |
| !!! | TGAATGAATTTGTTATGTAA+GGG | + | chr7_4:4537385-4537404 | Msa1136250:intron | 20.0% |
| !!! | ATCATACTTTGTAATTTTGT+CGG | + | chr7_4:4538238-4538257 | Msa1136250:intron | 20.0% |
| !!! | TTTTAACCCAATATTTGAAA+TGG | + | chr7_4:4538263-4538282 | Msa1136250:intron | 20.0% |
| !! | GATATATCCATTTCAAATAT+TGG | - | chr7_4:4538273-4538292 | None:intergenic | 20.0% |
| !! | TTGAAATGGATATATCTAAT+TGG | + | chr7_4:4538277-4538296 | Msa1136250:intron | 20.0% |
| !!! | TGTAAACTATTTTAAAGAAC+AGG | - | chr7_4:4538781-4538800 | None:intergenic | 20.0% |
| !!! | TGGTTTTTCTTCTTATATTA+AGG | - | chr7_4:4538990-4539009 | None:intergenic | 20.0% |
| !!! | TGAGACATTTTCTTATAAAT+AGG | + | chr7_4:4539178-4539197 | Msa1136250:intron | 20.0% |
| !!! | ATTTTTCTTATATTAAGGAC+CGG | + | chr7_4:4539219-4539238 | Msa1136250:intron | 20.0% |
| !! | ACAATAATAGTATTGTTCTA+TGG | - | chr7_4:4539270-4539289 | None:intergenic | 20.0% |
| !!! | TGATATTTTGTATTAGTAAC+TGG | + | chr7_4:4539443-4539462 | Msa1136250:intron | 20.0% |
| !!! | GATATTTTGTATTAGTAACT+GGG | + | chr7_4:4539444-4539463 | Msa1136250:intron | 20.0% |
| !! | ATATTAAAAAAGGAAAATGC+TGG | - | chr7_4:4539752-4539771 | None:intergenic | 20.0% |
| !! | CCAAAGGTTAATATTAAAAA+AGG | - | chr7_4:4539762-4539781 | None:intergenic | 20.0% |
| !!! | CCTTTTTTAATATTAACCTT+TGG | + | chr7_4:4539759-4539778 | Msa1136250:intron | 20.0% |
| !! | ATTTAATAGACACTTTCATT+TGG | - | chr7_4:4540546-4540565 | None:intergenic | 20.0% |
| !!! | AAATGAAAGTGTCTATTAAA+TGG | + | chr7_4:4540545-4540564 | Msa1136250:intron | 20.0% |
| !!! | AACTTTCAATTCTATTTCTT+AGG | - | chr7_4:4540666-4540685 | None:intergenic | 20.0% |
| !! | AAGAAATAGAATTGAAAGTT+TGG | + | chr7_4:4540666-4540685 | Msa1136250:intron | 20.0% |
| !!! | ATTGTTTTAATTACTTACCT+GGG | + | chr7_4:4541045-4541064 | Msa1136250:intron | 20.0% |
| ! | AAAACGAAGAATAAGAACTA+CGG | - | chr7_4:4536392-4536411 | None:intergenic | 25.0% |
| !!! | CAATTATATGCTTTTAAGAC+TGG | - | chr7_4:4536719-4536738 | None:intergenic | 25.0% |
| ! | ATTTGCTTATGATTCTTTCT+GGG | + | chr7_4:4536876-4536895 | Msa1136250:intron | 25.0% |
| !! | AGCAGTTTTCTTAAAAAAGT+AGG | - | chr7_4:4537131-4537150 | None:intergenic | 25.0% |
| !!! | TGCTGATCTTATTGATTTTA+AGG | + | chr7_4:4537147-4537166 | Msa1136250:CDS | 25.0% |
| ! | TTCAATGTAATCACATTTGT+TGG | + | chr7_4:4537286-4537305 | Msa1136250:intron | 25.0% |
| !!! | GTGAATGAATTTGTTATGTA+AGG | + | chr7_4:4537384-4537403 | Msa1136250:intron | 25.0% |
| ! | TTTAGAAAAACATTCATAGC+TGG | - | chr7_4:4537600-4537619 | None:intergenic | 25.0% |
| ! | GTCAAACTAGTTATGAATAT+GGG | + | chr7_4:4537643-4537662 | Msa1136250:CDS | 25.0% |
| !! | TTGTAATATTTGAAATGCTG+TGG | + | chr7_4:4537752-4537771 | Msa1136250:intron | 25.0% |
| !!! | AATCGTTTTAATTGAAAGTG+TGG | + | chr7_4:4538090-4538109 | Msa1136250:intron | 25.0% |
| !! | TCATACTTTGTAATTTTGTC+GGG | + | chr7_4:4538239-4538258 | Msa1136250:intron | 25.0% |
| ! | AATGGATATATCTAATTGGT+TGG | + | chr7_4:4538281-4538300 | Msa1136250:intron | 25.0% |
| ! | ATGGATATATCTAATTGGTT+GGG | + | chr7_4:4538282-4538301 | Msa1136250:intron | 25.0% |
| !! | TCGAATTTTGCATCATATTT+TGG | + | chr7_4:4538897-4538916 | Msa1136250:CDS | 25.0% |
| !! | CGAATTTTGCATCATATTTT+GGG | + | chr7_4:4538898-4538917 | Msa1136250:CDS | 25.0% |
| ! | TTTCTTCTTATATTAAGGAC+CGG | - | chr7_4:4538985-4539004 | None:intergenic | 25.0% |
| ! | AAAGATACAACAATTAATGC+TGG | - | chr7_4:4539032-4539051 | None:intergenic | 25.0% |
| ! | TGTTTCACAACATTCTATAA+GGG | - | chr7_4:4539076-4539095 | None:intergenic | 25.0% |
| ! | ATGTTTCACAACATTCTATA+AGG | - | chr7_4:4539077-4539096 | None:intergenic | 25.0% |
| !! | GTCTGACTTTTTAATATTAG+TGG | - | chr7_4:4539109-4539128 | None:intergenic | 25.0% |
| ! | AAAAAGTCAGACATTAAATG+AGG | + | chr7_4:4539117-4539136 | Msa1136250:intron | 25.0% |
| ! | AAAAGTCAGACATTAAATGA+GGG | + | chr7_4:4539118-4539137 | Msa1136250:intron | 25.0% |
| ! | AAAATATCATAGTAAAGCCA+TGG | - | chr7_4:4539432-4539451 | None:intergenic | 25.0% |
| ! | GTAATAATGTGTTCTACTAT+AGG | + | chr7_4:4539810-4539829 | Msa1136250:intron | 25.0% |
| ! | ATCAGTGACATTATACAAAA+AGG | - | chr7_4:4539885-4539904 | None:intergenic | 25.0% |
| ! | ATGAAATCATGCTATCATTA+CGG | - | chr7_4:4539912-4539931 | None:intergenic | 25.0% |
| !! | TAGTATGTTGTTGTTAATCA+TGG | - | chr7_4:4539940-4539959 | None:intergenic | 25.0% |
| ! | AACAACATACTATTATTTGC+AGG | + | chr7_4:4539948-4539967 | Msa1136250:intron | 25.0% |
| !!! | TGCTATAACAAAAAGCATTA+TGG | - | chr7_4:4540102-4540121 | None:intergenic | 25.0% |
| ! | CTAAGAAAGATTTCATTACA+GGG | - | chr7_4:4540371-4540390 | None:intergenic | 25.0% |
| ! | ACTAAGAAAGATTTCATTAC+AGG | - | chr7_4:4540372-4540391 | None:intergenic | 25.0% |
| ! | GTAATGAAATCTTTCTTAGT+TGG | + | chr7_4:4540372-4540391 | Msa1136250:intron | 25.0% |
| !!! | GGATAGTAGAATGTTTTTTT+GGG | + | chr7_4:4540616-4540635 | Msa1136250:intron | 25.0% |
| !!! | TAGAATGTTTTTTTGGGAAT+TGG | + | chr7_4:4540622-4540641 | Msa1136250:intron | 25.0% |
| !!! | AGAATGTTTTTTTGGGAATT+GGG | + | chr7_4:4540623-4540642 | Msa1136250:intron | 25.0% |
| !!! | TAGAATTGAAAGTTTGGTTT+TGG | + | chr7_4:4540672-4540691 | Msa1136250:intron | 25.0% |
| ! | GAAGAGATATATCAAGTAAA+TGG | - | chr7_4:4540856-4540875 | None:intergenic | 25.0% |
| !!! | CATTGTTTTAATTACTTACC+TGG | + | chr7_4:4541044-4541063 | Msa1136250:intron | 25.0% |
| ! | AACATTAAATACAGCTACAA+AGG | - | chr7_4:4541072-4541091 | None:intergenic | 25.0% |
| ! | AATAATGAATAGTGCCTATA+TGG | - | chr7_4:4541231-4541250 | None:intergenic | 25.0% |
| ! | GAGAAAAAGATAAATGTTTG+CGG | - | chr7_4:4541256-4541275 | None:intergenic | 25.0% |
| ! | ATTAATTCCTTGAACTGATT+TGG | + | chr7_4:4541337-4541356 | Msa1136250:three_prime_UTR | 25.0% |
| !! | TTAATTCCTTGAACTGATTT+GGG | + | chr7_4:4541338-4541357 | Msa1136250:three_prime_UTR | 25.0% |
| !! | TTTTAAACAATAATCTAGGG+TGG | + | chr7_4:4541526-4541545 | Msa1136250:three_prime_UTR | 25.0% |
| ! | TTGATTATGGCTTATTTGTT+GGG | - | chr7_4:4541557-4541576 | None:intergenic | 25.0% |
| ! | TTTGATTATGGCTTATTTGT+TGG | - | chr7_4:4541558-4541577 | None:intergenic | 25.0% |
| ! | GATTTGCTTATGATTCTTTC+TGG | + | chr7_4:4536875-4536894 | Msa1136250:intron | 30.0% |
| ! | AATCTGTATCTTTCCTCTTT+TGG | - | chr7_4:4536910-4536929 | None:intergenic | 30.0% |
| ATTTGCTTGAAAGTTGTTAG+TGG | + | chr7_4:4536969-4536988 | Msa1136250:intron | 30.0% | |
| !!! | TGTGTTGATTGACTAGTTTT+TGG | + | chr7_4:4537024-4537043 | Msa1136250:intron | 30.0% |
| !! | ATTTGTTATGTAAGGGAATG+AGG | + | chr7_4:4537392-4537411 | Msa1136250:intron | 30.0% |
| ! | TTTGTTATGTAAGGGAATGA+GGG | + | chr7_4:4537393-4537412 | Msa1136250:intron | 30.0% |
| CAGATGATTTAAGAAATCTG+AGG | - | chr7_4:4537531-4537550 | None:intergenic | 30.0% | |
| ! | TCTAAATTTTACCACTTTGC+AGG | + | chr7_4:4537614-4537633 | Msa1136250:intron | 30.0% |
| CGTCAAACTAGTTATGAATA+TGG | + | chr7_4:4537642-4537661 | Msa1136250:CDS | 30.0% | |
| TCATTATTGAATCAGTGAAC+TGG | + | chr7_4:4537797-4537816 | Msa1136250:intron | 30.0% | |
| !! | GTGAATTCATTGATTTGTGT+TGG | + | chr7_4:4537985-4538004 | Msa1136250:intron | 30.0% |
| ! | TCTTCCTGGAAATTTTTATG+TGG | + | chr7_4:4538159-4538178 | Msa1136250:intron | 30.0% |
| ! | CATACTTTGTAATTTTGTCG+GGG | + | chr7_4:4538240-4538259 | Msa1136250:intron | 30.0% |
| ! | TTAGTGTTGGGAAGATTAAT+TGG | + | chr7_4:4538472-4538491 | Msa1136250:intron | 30.0% |
| TAGATACTGTAGAATTCTGA+TGG | + | chr7_4:4538516-4538535 | Msa1136250:intron | 30.0% | |
| !!! | AACCAGAAAGAAGTGTTTTT+AGG | - | chr7_4:4538827-4538846 | None:intergenic | 30.0% |
| !! | ATTTTGCATCATATTTTGGG+CGG | + | chr7_4:4538901-4538920 | Msa1136250:CDS | 30.0% |
| AGTATATCAATCAAGGAATC+GGG | - | chr7_4:4538958-4538977 | None:intergenic | 30.0% | |
| GAGTATATCAATCAAGGAAT+CGG | - | chr7_4:4538959-4538978 | None:intergenic | 30.0% | |
| !!! | GCATTGGTTTTGATGTTTTT+TGG | - | chr7_4:4539010-4539029 | None:intergenic | 30.0% |
| ! | GTTCCATATCTTGATTTTAG+CGG | + | chr7_4:4539649-4539668 | Msa1136250:intron | 30.0% |
| !! | TTCCATATCTTGATTTTAGC+GGG | + | chr7_4:4539650-4539669 | Msa1136250:intron | 30.0% |
| ! | GGAATTGCTATTCAAATTTG+TGG | + | chr7_4:4540069-4540088 | Msa1136250:intron | 30.0% |
| !! | GCTTTTTGTTATAGCATAGT+TGG | + | chr7_4:4540106-4540125 | Msa1136250:intron | 30.0% |
| GATCTCAACAATTTCAAACA+AGG | - | chr7_4:4540415-4540434 | None:intergenic | 30.0% | |
| ! | AAAGTGTCTATTAAATGGAG+AGG | + | chr7_4:4540550-4540569 | Msa1136250:intron | 30.0% |
| CTATTAAATGGAGAGGATAT+TGG | + | chr7_4:4540557-4540576 | Msa1136250:intron | 30.0% | |
| AAAAGAAAGAAACAACCATG+TGG | + | chr7_4:4540594-4540613 | Msa1136250:intron | 30.0% | |
| AAAGAAAGAAACAACCATGT+GGG | + | chr7_4:4540595-4540614 | Msa1136250:intron | 30.0% | |
| !!! | GGGATAGTAGAATGTTTTTT+TGG | + | chr7_4:4540615-4540634 | Msa1136250:intron | 30.0% |
| ACAGAAAACACTTCACTAAT+TGG | + | chr7_4:4540707-4540726 | Msa1136250:intron | 30.0% | |
| AAACACTTCACTAATTGGAA+AGG | + | chr7_4:4540712-4540731 | Msa1136250:intron | 30.0% | |
| ! | ATGTTGACTAATCATAGCAA+TGG | - | chr7_4:4540799-4540818 | None:intergenic | 30.0% |
| ! | ATTGCTATGATTAGTCAACA+TGG | + | chr7_4:4540798-4540817 | Msa1136250:intron | 30.0% |
| GATAGAATGACAAAACAAAG+TGG | - | chr7_4:4540973-4540992 | None:intergenic | 30.0% | |
| ! | TTTTTCATGTATTCTGCAAC+AGG | + | chr7_4:4541090-4541109 | Msa1136250:intron | 30.0% |
| ! | TTTTCATGTATTCTGCAACA+GGG | + | chr7_4:4541091-4541110 | Msa1136250:intron | 30.0% |
| ATTGTCATAAATCTTCCACT+TGG | - | chr7_4:4541138-4541157 | None:intergenic | 30.0% | |
| GTGGAAGATTTATGACAATT+TGG | + | chr7_4:4541139-4541158 | Msa1136250:CDS | 30.0% | |
| !!! | CTTTGGAATTGAAGATTTTG+AGG | + | chr7_4:4541172-4541191 | Msa1136250:CDS | 30.0% |
| !! | TGAAGATTTTGAGGATTTGA+AGG | + | chr7_4:4541181-4541200 | Msa1136250:CDS | 30.0% |
| !!! | TTCTCTCTTGTTATTTTGTC+TGG | + | chr7_4:4541370-4541389 | Msa1136250:three_prime_UTR | 30.0% |
| ATGATTGCGTAATGATGTAT+TGG | + | chr7_4:4541408-4541427 | Msa1136250:three_prime_UTR | 30.0% | |
| TGATTGCGTAATGATGTATT+GGG | + | chr7_4:4541409-4541428 | Msa1136250:three_prime_UTR | 30.0% | |
| ! | TTGGGCTTGTTTAAGAAAAA+TGG | + | chr7_4:4541427-4541446 | Msa1136250:three_prime_UTR | 30.0% |
| CACTTCAACATTACAATCAT+AGG | - | chr7_4:4541475-4541494 | None:intergenic | 30.0% | |
| ! | TGATTATGGCTTATTTGTTG+GGG | - | chr7_4:4541556-4541575 | None:intergenic | 30.0% |
| AAGCCATAATCAAAGATCTA+AGG | + | chr7_4:4541564-4541583 | Msa1136250:three_prime_UTR | 30.0% | |
| ! | TAGCCTTAGATCTTTGATTA+TGG | - | chr7_4:4541570-4541589 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGTCGTTTTGGTG+TGG | - | chr7_4:4535957-4535976 | None:intergenic | 35.0% |
| CACCAAAACGACACAAAAAA+TGG | + | chr7_4:4535957-4535976 | Msa1136250:exon | 35.0% | |
| ! | ATGAATCGTTTTGCTTGCAT+CGG | - | chr7_4:4536421-4536440 | None:intergenic | 35.0% |
| AAAACGATTCATGCTGGTAT+GGG | + | chr7_4:4536429-4536448 | Msa1136250:intron | 35.0% | |
| AGAATGCAATCACATGTATC+AGG | - | chr7_4:4537504-4537523 | None:intergenic | 35.0% | |
| TGCTGTGGTTGAATTTAATG+AGG | + | chr7_4:4537767-4537786 | Msa1136250:intron | 35.0% | |
| TATTGAATCAGTGAACTGGA+AGG | + | chr7_4:4537801-4537820 | Msa1136250:intron | 35.0% | |
| ATTGAATCAGTGAACTGGAA+GGG | + | chr7_4:4537802-4537821 | Msa1136250:intron | 35.0% | |
| ! | TGACTACTACTGATTGTTAC+AGG | + | chr7_4:4537910-4537929 | Msa1136250:CDS | 35.0% |
| TTGAGTTACCTATGGAAACA+CGG | - | chr7_4:4538059-4538078 | None:intergenic | 35.0% | |
| ! | ACTACTCTTTGAGTTACCTA+TGG | - | chr7_4:4538067-4538086 | None:intergenic | 35.0% |
| AGACAACTAGGAGCTAATTA+AGG | - | chr7_4:4538142-4538161 | None:intergenic | 35.0% | |
| AAATTTCCAGGAAGACAACT+AGG | - | chr7_4:4538154-4538173 | None:intergenic | 35.0% | |
| CTCTCCACATAAAAATTTCC+AGG | - | chr7_4:4538166-4538185 | None:intergenic | 35.0% | |
| TATATCTAATTGGTTGGGTG+TGG | + | chr7_4:4538287-4538306 | Msa1136250:intron | 35.0% | |
| !!! | ATGGTTTTGTACAAATGTGC+AGG | + | chr7_4:4538535-4538554 | Msa1136250:intron | 35.0% |
| GACCTAAAAACACTTCTTTC+TGG | + | chr7_4:4538822-4538841 | Msa1136250:intron | 35.0% | |
| !! | AAAACACTTCTTTCTGGTTC+AGG | + | chr7_4:4538828-4538847 | Msa1136250:intron | 35.0% |
| TTCTTATATTAAGGACCGGA+GGG | - | chr7_4:4539223-4539242 | None:intergenic | 35.0% | |
| ACAACAATTAATGCTGGCAT+TGG | - | chr7_4:4539026-4539045 | None:intergenic | 35.0% | |
| TTTCTTATATTAAGGACCGG+AGG | + | chr7_4:4539222-4539241 | Msa1136250:intron | 35.0% | |
| TTCTTATATTAAGGACCGGA+GGG | + | chr7_4:4539223-4539242 | Msa1136250:intron | 35.0% | |
| TAACATGTTCACACTATGTC+AGG | - | chr7_4:4539294-4539313 | None:intergenic | 35.0% | |
| ! | TTTTCATGCCTCTGATGAAT+AGG | - | chr7_4:4539332-4539351 | None:intergenic | 35.0% |
| TTCCCGCTAAAATCAAGATA+TGG | - | chr7_4:4539655-4539674 | None:intergenic | 35.0% | |
| GGTGATAAATAGCCAATAAG+CGG | + | chr7_4:4539688-4539707 | Msa1136250:intron | 35.0% | |
| TTGCCTATAATGCAGATTGA+TGG | + | chr7_4:4540148-4540167 | Msa1136250:intron | 35.0% | |
| TCTCCATCAATCTGCATTAT+AGG | - | chr7_4:4540154-4540173 | None:intergenic | 35.0% | |
| TGAGTACCAGTAAGACAAAA+TGG | - | chr7_4:4540269-4540288 | None:intergenic | 35.0% | |
| TTGTCTTACTGGTACTCATT+TGG | + | chr7_4:4540271-4540290 | Msa1136250:intron | 35.0% | |
| ACATTACTTGTCATGTGCTA+TGG | + | chr7_4:4540329-4540348 | Msa1136250:intron | 35.0% | |
| TTACAGGGTCACATTCAAAT+AGG | - | chr7_4:4540356-4540375 | None:intergenic | 35.0% | |
| TTAGTCTATCTCTCTCCAAA+TGG | - | chr7_4:4540460-4540479 | None:intergenic | 35.0% | |
| TTTGGAGAGAGATAGACTAA+TGG | + | chr7_4:4540460-4540479 | Msa1136250:intron | 35.0% | |
| AATGGAGAGGATATTGGAAT+AGG | + | chr7_4:4540563-4540582 | Msa1136250:intron | 35.0% | |
| ATGGAGAGGATATTGGAATA+GGG | + | chr7_4:4540564-4540583 | Msa1136250:intron | 35.0% | |
| AAACATTCTACTATCCCACA+TGG | - | chr7_4:4540612-4540631 | None:intergenic | 35.0% | |
| TTCTTAGGAGTTCCAAACAA+GGG | - | chr7_4:4540651-4540670 | None:intergenic | 35.0% | |
| TTTCTTAGGAGTTCCAAACA+AGG | - | chr7_4:4540652-4540671 | None:intergenic | 35.0% | |
| ! | AAGTGTTTTCTGTAGTAGGA+GGG | - | chr7_4:4540700-4540719 | None:intergenic | 35.0% |
| !! | AGTGAAGTGTTTTCTGTAGT+AGG | - | chr7_4:4540704-4540723 | None:intergenic | 35.0% |
| ! | AATTTGGTTCGATTCAGCTT+TGG | + | chr7_4:4541155-4541174 | Msa1136250:CDS | 35.0% |
| ! | TCATCATTTGGTTGGTGTAG+AGG | + | chr7_4:4535891-4535910 | Msa1136250:five_prime_UTR | 40.0% |
| ! | TGGTGTGGTTAGGTTTTTCT+TGG | - | chr7_4:4535942-4535961 | None:intergenic | 40.0% |
| !!! | GGCCATTTTTTGTGTCGTTT+TGG | - | chr7_4:4535962-4535981 | None:intergenic | 40.0% |
| GTTGGAAATTGGGAGGAAAA+CGG | - | chr7_4:4536137-4536156 | None:intergenic | 40.0% | |
| ! | CTGAGTTGACGTTGGAAATT+GGG | - | chr7_4:4536147-4536166 | None:intergenic | 40.0% |
| CAAAACGATTCATGCTGGTA+TGG | + | chr7_4:4536428-4536447 | Msa1136250:intron | 40.0% | |
| ! | CTGGGTTTTTGTACCAAAAG+AGG | + | chr7_4:4536894-4536913 | Msa1136250:intron | 40.0% |
| TATTATGCAGCTGAGAGACT+TGG | + | chr7_4:4537055-4537074 | Msa1136250:intron | 40.0% | |
| TACTTGTAAGCTACGAAGCA+CGG | + | chr7_4:4537208-4537227 | Msa1136250:intron | 40.0% | |
| ! | CAATCGACACTTTTGATCGA+AGG | - | chr7_4:4537347-4537366 | None:intergenic | 40.0% |
| !! | TAGCACCGACACTTTATTGA+GGG | + | chr7_4:4537444-4537463 | Msa1136250:intron | 40.0% |
| ACATGCCCTCAATAAAGTGT+CGG | - | chr7_4:4537452-4537471 | None:intergenic | 40.0% | |
| ! | TGAGGGCATGTTTGAAGTTT+CGG | + | chr7_4:4537461-4537480 | Msa1136250:intron | 40.0% |
| ACAATACCAACACTGACACA+TGG | - | chr7_4:4537557-4537576 | None:intergenic | 40.0% | |
| AGTTATGAATATGGGCGCTA+TGG | + | chr7_4:4537651-4537670 | Msa1136250:CDS | 40.0% | |
| !!! | CTGTTTTGGAGGAGAAGATA+AGG | + | chr7_4:4537688-4537707 | Msa1136250:CDS | 40.0% |
| TTGAATCAGTGAACTGGAAG+GGG | + | chr7_4:4537803-4537822 | Msa1136250:intron | 40.0% | |
| ! | TCAACTATCTTGATGGCATC+TGG | + | chr7_4:4537831-4537850 | Msa1136250:CDS | 40.0% |
| ! | CAACTATCTTGATGGCATCT+GGG | + | chr7_4:4537832-4537851 | Msa1136250:CDS | 40.0% |
| CTGATTGTTACAGGAAGACT+AGG | + | chr7_4:4537919-4537938 | Msa1136250:CDS | 40.0% | |
| AGAGACTGTTCTTCCAAAGA+TGG | + | chr7_4:4537950-4537969 | Msa1136250:CDS | 40.0% | |
| GAGACTGTTCTTCCAAAGAT+GGG | + | chr7_4:4537951-4537970 | Msa1136250:CDS | 40.0% | |
| AGACTGTTCTTCCAAAGATG+GGG | + | chr7_4:4537952-4537971 | Msa1136250:CDS | 40.0% | |
| TTATGTTCCCGTGTTTCCAT+AGG | + | chr7_4:4538048-4538067 | Msa1136250:intron | 40.0% | |
| TGAGTTACCTATGGAAACAC+GGG | - | chr7_4:4538058-4538077 | None:intergenic | 40.0% | |
| GTTATGCTTCCTTTCTGAAC+TGG | + | chr7_4:4538319-4538338 | Msa1136250:intron | 40.0% | |
| AGCAGAACAAGGTTAGTGTT+GGG | + | chr7_4:4538460-4538479 | Msa1136250:intron | 40.0% | |
| AACACATCTCAGGAATGGAT+TGG | - | chr7_4:4538588-4538607 | None:intergenic | 40.0% | |
| ATGTCAACACATCTCAGGAA+TGG | - | chr7_4:4538593-4538612 | None:intergenic | 40.0% | |
| GCTTAATGTCAACACATCTC+AGG | - | chr7_4:4538598-4538617 | None:intergenic | 40.0% | |
| ! | GAGATGTGTTGACATTAAGC+TGG | + | chr7_4:4538598-4538617 | Msa1136250:CDS | 40.0% |
| TCAGAACTTTGCCACAAGAA+TGG | + | chr7_4:4538623-4538642 | Msa1136250:CDS | 40.0% | |
| CAGAACTTTGCCACAAGAAT+GGG | + | chr7_4:4538624-4538643 | Msa1136250:CDS | 40.0% | |
| AGAACTTTGCCACAAGAATG+GGG | + | chr7_4:4538625-4538644 | Msa1136250:CDS | 40.0% | |
| CATAACCAAATCAGCACCAA+GGG | - | chr7_4:4538705-4538724 | None:intergenic | 40.0% | |
| CACTCTTGTACGAAGTACAT+CGG | + | chr7_4:4538725-4538744 | Msa1136250:CDS | 40.0% | |
| !! | TTCTTTCTGGTTCAGGTACT+TGG | + | chr7_4:4538835-4538854 | Msa1136250:intron | 40.0% |
| !! | TGGCTCTTTGAAGTTGATCT+CGG | + | chr7_4:4538870-4538889 | Msa1136250:CDS | 40.0% |
| GCTTGTAGTAATGACTAACC+GGG | - | chr7_4:4538936-4538955 | None:intergenic | 40.0% | |
| GGCTTGTAGTAATGACTAAC+CGG | - | chr7_4:4538937-4538956 | None:intergenic | 40.0% | |
| CTTGATTGATATACTCCCTC+CGG | + | chr7_4:4538963-4538982 | Msa1136250:intron | 40.0% | |
| CTTCTTATATTAAGGACCGG+AGG | - | chr7_4:4538982-4539001 | None:intergenic | 40.0% | |
| GTACAGCAACAGAATTCAAC+CGG | + | chr7_4:4539366-4539385 | Msa1136250:CDS | 40.0% | |
| AACAGAATTCAACCGGAATG+AGG | + | chr7_4:4539373-4539392 | Msa1136250:CDS | 40.0% | |
| TAGTAAAGCCATGGTACCTT+GGG | - | chr7_4:4539423-4539442 | None:intergenic | 40.0% | |
| ATAGTAAAGCCATGGTACCT+TGG | - | chr7_4:4539424-4539443 | None:intergenic | 40.0% | |
| CTTAAGCACATCAATCCCAA+AGG | - | chr7_4:4539778-4539797 | None:intergenic | 40.0% | |
| !! | GATGTGCTTAAGCTGTTTTG+TGG | + | chr7_4:4539786-4539805 | Msa1136250:intron | 40.0% |
| CAAATGAGGCAGCAATGTAT+GGG | - | chr7_4:4540216-4540235 | None:intergenic | 40.0% | |
| !! | AACCAGCCATTTTGTCTTAC+TGG | + | chr7_4:4540260-4540279 | Msa1136250:CDS | 40.0% |
| TACCAGTAAGACAAAATGGC+TGG | - | chr7_4:4540265-4540284 | None:intergenic | 40.0% | |
| ! | AACAAGGCGTAAAAGCACAA+AGG | - | chr7_4:4540399-4540418 | None:intergenic | 40.0% |
| TTGAGATCCTCTCCATTTGA+TGG | + | chr7_4:4540427-4540446 | Msa1136250:intron | 40.0% | |
| TGAGATCCTCTCCATTTGAT+GGG | + | chr7_4:4540428-4540447 | Msa1136250:intron | 40.0% | |
| !! | AATGGAAGTGTCCCATCAAA+TGG | - | chr7_4:4540442-4540461 | None:intergenic | 40.0% |
| TTTGATGGGACACTTCCATT+TGG | + | chr7_4:4540442-4540461 | Msa1136250:intron | 40.0% | |
| !! | GAAGTGTTTTCTGTAGTAGG+AGG | - | chr7_4:4540701-4540720 | None:intergenic | 40.0% |
| AATCATAGCAATGGCATGAG+TGG | - | chr7_4:4540790-4540809 | None:intergenic | 40.0% | |
| AGATACACGCAGCAAATACT+GGG | - | chr7_4:4541311-4541330 | None:intergenic | 40.0% | |
| AGAACACCCAAATCAGTTCA+AGG | - | chr7_4:4541347-4541366 | None:intergenic | 40.0% | |
| ! | TTGGTTGGTGTAGAGGAAGT+AGG | + | chr7_4:4535898-4535917 | Msa1136250:five_prime_UTR | 45.0% |
| !!! | TGTGTCGTTTTGGTGTGGTT+AGG | - | chr7_4:4535952-4535971 | None:intergenic | 45.0% |
| AACGCGGTGGAAACTTGAAA+CGG | - | chr7_4:4535983-4536002 | None:intergenic | 45.0% | |
| AGGTTGTTGGGAAATGACGA+CGG | - | chr7_4:4536077-4536096 | None:intergenic | 45.0% | |
| AGTTGACGTTGGAAATTGGG+AGG | - | chr7_4:4536144-4536163 | None:intergenic | 45.0% | |
| ! | GCTGAGTTGACGTTGGAAAT+TGG | - | chr7_4:4536148-4536167 | None:intergenic | 45.0% |
| TGTTGATGCAACAACTGCTC+CGG | + | chr7_4:4536299-4536318 | Msa1136250:CDS | 45.0% | |
| ! | ATTTTCGACGACATCGCCAT+CGG | - | chr7_4:4536352-4536371 | None:intergenic | 45.0% |
| ATGGCGATGTCGTCGAAAAT+GGG | + | chr7_4:4536352-4536371 | Msa1136250:CDS | 45.0% | |
| GCAAGCAAAACGATTCATGC+TGG | + | chr7_4:4536423-4536442 | Msa1136250:CDS | 45.0% | |
| TGATGGAATTACCACTCCTG+TGG | + | chr7_4:4537093-4537112 | Msa1136250:CDS | 45.0% | |
| CACTGACACTTGTCAGACAT+TGG | + | chr7_4:4537316-4537335 | Msa1136250:intron | 45.0% | |
| !! | GTAGCACCGACACTTTATTG+AGG | + | chr7_4:4537443-4537462 | Msa1136250:intron | 45.0% |
| TTGACGTTTCTCCTGCAAAG+TGG | - | chr7_4:4537628-4537647 | None:intergenic | 45.0% | |
| ! | CAACCCAACCAGTACTGTTT+TGG | + | chr7_4:4537674-4537693 | Msa1136250:CDS | 45.0% |
| !! | CCTCCAAAACAGTACTGGTT+GGG | - | chr7_4:4537680-4537699 | None:intergenic | 45.0% |
| !! | TCCTCCAAAACAGTACTGGT+TGG | - | chr7_4:4537681-4537700 | None:intergenic | 45.0% |
| CTTCTCCTCCAAAACAGTAC+TGG | - | chr7_4:4537685-4537704 | None:intergenic | 45.0% | |
| GGCTGAGTCAACTATCTTGA+TGG | + | chr7_4:4537824-4537843 | Msa1136250:CDS | 45.0% | |
| ! | TGCTAGCATAGTCTTGCTGA+TGG | + | chr7_4:4537860-4537879 | Msa1136250:CDS | 45.0% |
| AGTAGTCACAAGATGTCCAC+CGG | - | chr7_4:4537898-4537917 | None:intergenic | 45.0% | |
| TCTTCCAAAGATGGGGATCA+AGG | + | chr7_4:4537959-4537978 | Msa1136250:CDS | 45.0% | |
| CATACCTTGATCCCCATCTT+TGG | - | chr7_4:4537966-4537985 | None:intergenic | 45.0% | |
| TTAGCTCCTAGTTGTCTTCC+TGG | + | chr7_4:4538145-4538164 | Msa1136250:intron | 45.0% | |
| ATCTAATTGGTTGGGTGTGG+TGG | + | chr7_4:4538290-4538309 | Msa1136250:intron | 45.0% | |
| AACATCAGCAGGATCAACCA+CGG | - | chr7_4:4538418-4538437 | None:intergenic | 45.0% | |
| !! | ATCTGCTTTGGAGCAGAACA+AGG | + | chr7_4:4538449-4538468 | Msa1136250:CDS | 45.0% |
| GAGCAGAACAAGGTTAGTGT+TGG | + | chr7_4:4538459-4538478 | Msa1136250:intron | 45.0% | |
| !! | GAATGGATTGGTAGGAGACT+CGG | - | chr7_4:4538576-4538595 | None:intergenic | 45.0% |
| !! | CATCTCAGGAATGGATTGGT+AGG | - | chr7_4:4538584-4538603 | None:intergenic | 45.0% |
| GCATAACCAAATCAGCACCA+AGG | - | chr7_4:4538706-4538725 | None:intergenic | 45.0% | |
| TCTTGTACGAAGTACATCGG+TGG | + | chr7_4:4538728-4538747 | Msa1136250:CDS | 45.0% | |
| !! | TTTCTGGTTCAGGTACTTGG+TGG | + | chr7_4:4538838-4538857 | Msa1136250:intron | 45.0% |
| ! | CGGAGGGAGTATATCAATCA+AGG | - | chr7_4:4538965-4538984 | None:intergenic | 45.0% |
| CATTTGCAACATACTCCCTC+CGG | - | chr7_4:4539241-4539260 | None:intergenic | 45.0% | |
| GCTGCATACCTATTCATCAG+AGG | + | chr7_4:4539321-4539340 | Msa1136250:CDS | 45.0% | |
| GAATTCAACCGGAATGAGGA+TGG | + | chr7_4:4539377-4539396 | Msa1136250:CDS | 45.0% | |
| AAGTTTGGCCATCCTCATTC+CGG | - | chr7_4:4539388-4539407 | None:intergenic | 45.0% | |
| ! | GAGGATGGCCAAACTTTTAG+AGG | + | chr7_4:4539392-4539411 | Msa1136250:CDS | 45.0% |
| ! | GGGATGTGCCTCTAAAAGTT+TGG | - | chr7_4:4539403-4539422 | None:intergenic | 45.0% |
| !! | ACTTTTAGAGGCACATCCCA+AGG | + | chr7_4:4539404-4539423 | Msa1136250:CDS | 45.0% |
| ! | AGCGGGAAACAAAAGTGCAA+AGG | + | chr7_4:4539667-4539686 | Msa1136250:intron | 45.0% |
| GGATCACAGATACCGCTTAT+TGG | - | chr7_4:4539703-4539722 | None:intergenic | 45.0% | |
| GCGAGAGTTTCTATCCTGAA+TGG | - | chr7_4:4539724-4539743 | None:intergenic | 45.0% | |
| GTGAAGTGTGTCTACTATCC+AGG | + | chr7_4:4539970-4539989 | Msa1136250:CDS | 45.0% | |
| AGCTCATGTTCAGGATGACT+TGG | - | chr7_4:4540000-4540019 | None:intergenic | 45.0% | |
| AAAACCAGTCATCTGCCTCA+TGG | - | chr7_4:4540025-4540044 | None:intergenic | 45.0% | |
| !!! | ATGAGGCAGATGACTGGTTT+TGG | + | chr7_4:4540024-4540043 | Msa1136250:CDS | 45.0% |
| !!! | TGAGGCAGATGACTGGTTTT+GGG | + | chr7_4:4540025-4540044 | Msa1136250:CDS | 45.0% |
| CCAAATGAGGCAGCAATGTA+TGG | - | chr7_4:4540217-4540236 | None:intergenic | 45.0% | |
| CCATACATTGCTGCCTCATT+TGG | + | chr7_4:4540214-4540233 | Msa1136250:CDS | 45.0% | |
| TACATTGCTGCCTCATTTGG+TGG | + | chr7_4:4540217-4540236 | Msa1136250:CDS | 45.0% | |
| AAGTGTCCCATCAAATGGAG+AGG | - | chr7_4:4540437-4540456 | None:intergenic | 45.0% | |
| AATACAGCTACAAAGGACCC+AGG | - | chr7_4:4541065-4541084 | None:intergenic | 45.0% | |
| TTTGAAGGCTGATGTCTTGC+AGG | + | chr7_4:4541196-4541215 | Msa1136250:CDS | 45.0% | |
| CAGATACACGCAGCAAATAC+TGG | - | chr7_4:4541312-4541331 | None:intergenic | 45.0% | |
| ! | GTATTTGCTGCGTGTATCTG+CGG | + | chr7_4:4541312-4541331 | Msa1136250:three_prime_UTR | 45.0% |
| !! | TTATTGTTTAAAAAAAAAAT+TGG | - | chr7_4:4541519-4541538 | None:intergenic | 5.0% |
| GGTGTAGAGGAAGTAGGTGT+AGG | + | chr7_4:4535904-4535923 | Msa1136250:five_prime_UTR | 50.0% | |
| ATTCGAAGGTGAAAACGCGG+TGG | - | chr7_4:4535996-4536015 | None:intergenic | 50.0% | |
| GGCATTCGAAGGTGAAAACG+CGG | - | chr7_4:4535999-4536018 | None:intergenic | 50.0% | |
| AGGTGAAATCGGGATCGGAA+CGG | - | chr7_4:4536020-4536039 | None:intergenic | 50.0% | |
| AAGGGAGGTGAAATCGGGAT+CGG | - | chr7_4:4536025-4536044 | None:intergenic | 50.0% | |
| GATGGAAGGGAGGTGAAATC+GGG | - | chr7_4:4536030-4536049 | None:intergenic | 50.0% | |
| GGATGGAAGGGAGGTGAAAT+CGG | - | chr7_4:4536031-4536050 | None:intergenic | 50.0% | |
| GTTGTTGTCGGTGGATGGAA+GGG | - | chr7_4:4536043-4536062 | None:intergenic | 50.0% | |
| GTTATGGTGGTTGTTGTCGG+TGG | - | chr7_4:4536052-4536071 | None:intergenic | 50.0% | |
| GCGGTTATGGTGGTTGTTGT+CGG | - | chr7_4:4536055-4536074 | None:intergenic | 50.0% | |
| TTGTTGGGAAATGACGACGG+CGG | - | chr7_4:4536074-4536093 | None:intergenic | 50.0% | |
| TGGGAGGAAAACGGAGGATT+GGG | - | chr7_4:4536128-4536147 | None:intergenic | 50.0% | |
| TTGGGAGGAAAACGGAGGAT+TGG | - | chr7_4:4536129-4536148 | None:intergenic | 50.0% | |
| GGAAATTGGGAGGAAAACGG+AGG | - | chr7_4:4536134-4536153 | None:intergenic | 50.0% | |
| !! | CTTTGGTGCTGAGTTGACGT+TGG | - | chr7_4:4536155-4536174 | None:intergenic | 50.0% |
| CGTCGTAACTGCAGCAACAT+CGG | + | chr7_4:4536177-4536196 | Msa1136250:CDS | 50.0% | |
| TCGTGGTCTAACGAAGGAAC+TGG | + | chr7_4:4536222-4536241 | Msa1136250:CDS | 50.0% | |
| CGTGGTCTAACGAAGGAACT+GGG | + | chr7_4:4536223-4536242 | Msa1136250:CDS | 50.0% | |
| TCAACAGCAGATGCAACAGC+CGG | - | chr7_4:4536285-4536304 | None:intergenic | 50.0% | |
| GATGGCGATGTCGTCGAAAA+TGG | + | chr7_4:4536351-4536370 | Msa1136250:CDS | 50.0% | |
| TGGCGATGTCGTCGAAAATG+GGG | + | chr7_4:4536353-4536372 | Msa1136250:CDS | 50.0% | |
| ! | ATGCAGCTGAGAGACTTGGT+AGG | + | chr7_4:4537059-4537078 | Msa1136250:intron | 50.0% |
| ! | TGCAGCTGAGAGACTTGGTA+GGG | + | chr7_4:4537060-4537079 | Msa1136250:intron | 50.0% |
| GGTAGGGCTATTGTGACTGA+TGG | + | chr7_4:4537076-4537095 | Msa1136250:CDS | 50.0% | |
| !! | AGAAGTGTTCACCACAGGAG+TGG | - | chr7_4:4537107-4537126 | None:intergenic | 50.0% |
| !! | TAGGCAGAAGTGTTCACCAC+AGG | - | chr7_4:4537112-4537131 | None:intergenic | 50.0% |
| TAAGCTACGAAGCACGGACA+CGG | + | chr7_4:4537214-4537233 | Msa1136250:intron | 50.0% | |
| CTGTGTCCATGTGTCAGTGT+TGG | + | chr7_4:4537548-4537567 | Msa1136250:intron | 50.0% | |
| !! | CCCAACCAGTACTGTTTTGG+AGG | + | chr7_4:4537677-4537696 | Msa1136250:CDS | 50.0% |
| CTGCAAGTGCCAGTTCAGAA+AGG | - | chr7_4:4538331-4538350 | None:intergenic | 50.0% | |
| CCACGGATGTCTGCTCAATA+AGG | - | chr7_4:4538401-4538420 | None:intergenic | 50.0% | |
| CCTTATTGAGCAGACATCCG+TGG | + | chr7_4:4538398-4538417 | Msa1136250:intron | 50.0% | |
| GTGGTTGATCCTGCTGATGT+TGG | + | chr7_4:4538417-4538436 | Msa1136250:CDS | 50.0% | |
| TGGAGCCTTGCAATCTGCTT+TGG | + | chr7_4:4538437-4538456 | Msa1136250:CDS | 50.0% | |
| CTGCTCCAAAGCAGATTGCA+AGG | - | chr7_4:4538445-4538464 | None:intergenic | 50.0% | |
| TGCTACGCCTTTGAACCAGA+AGG | + | chr7_4:4538673-4538692 | Msa1136250:CDS | 50.0% | |
| CAAATCAGCACCAAGGGCAA+GGG | - | chr7_4:4538699-4538718 | None:intergenic | 50.0% | |
| ! | GTACTTGGTGGTTGCATCAG+TGG | + | chr7_4:4538850-4538869 | Msa1136250:CDS | 50.0% |
| GCGGTATCTGTGATCCATTC+AGG | + | chr7_4:4539707-4539726 | Msa1136250:intron | 50.0% | |
| CTCATGGCAAGCTCATGTTC+AGG | - | chr7_4:4540009-4540028 | None:intergenic | 50.0% | |
| CTGAACATGAGCTTGCCATG+AGG | + | chr7_4:4540007-4540026 | Msa1136250:CDS | 50.0% | |
| !!! | GAGGCAGATGACTGGTTTTG+GGG | + | chr7_4:4540026-4540045 | Msa1136250:CDS | 50.0% |
| !!! | AGGCAGATGACTGGTTTTGG+GGG | + | chr7_4:4540027-4540046 | Msa1136250:CDS | 50.0% |
| !!! | GGTGTGGTCAGTTTTGAGGT+GGG | + | chr7_4:4540048-4540067 | Msa1136250:intron | 50.0% |
| GGGAATTGGGTTCCCTTGTT+TGG | + | chr7_4:4540636-4540655 | Msa1136250:intron | 50.0% | |
| GGACCTTCCTGCATCAGAAA+GGG | + | chr7_4:4541112-4541131 | Msa1136250:CDS | 50.0% | |
| GGTTGTTGTCGGTGGATGGA+AGG | - | chr7_4:4536044-4536063 | None:intergenic | 55.0% | |
| TGGTGGTTGTTGTCGGTGGA+TGG | - | chr7_4:4536048-4536067 | None:intergenic | 55.0% | |
| AATGACGACGGCGGTTATGG+TGG | - | chr7_4:4536065-4536084 | None:intergenic | 55.0% | |
| GGAAATGACGACGGCGGTTA+TGG | - | chr7_4:4536068-4536087 | None:intergenic | 55.0% | |
| AGGAAAACGGAGGATTGGGG+AGG | - | chr7_4:4536124-4536143 | None:intergenic | 55.0% | |
| GGGAGGAAAACGGAGGATTG+GGG | - | chr7_4:4536127-4536146 | None:intergenic | 55.0% | |
| CACAAATCGTCGCTGCTTCG+TGG | + | chr7_4:4536205-4536224 | Msa1136250:CDS | 55.0% | |
| GCTGCTTCGTGGTCTAACGA+AGG | + | chr7_4:4536216-4536235 | Msa1136250:CDS | 55.0% | |
| ! | ACATCGGCGTCGAGGTCTAA+CGG | - | chr7_4:4536327-4536346 | None:intergenic | 55.0% |
| ! | CATAGTCTTGCTGATGGCGC+TGG | + | chr7_4:4537866-4537885 | Msa1136250:CDS | 55.0% |
| TGCAAGGCTCCAACATCAGC+AGG | - | chr7_4:4538429-4538448 | None:intergenic | 55.0% | |
| CGAGCAAAGCCCCATTCTTG+TGG | - | chr7_4:4538637-4538656 | None:intergenic | 55.0% | |
| GGGGCTTTGCTCGTCATTGA+TGG | + | chr7_4:4538644-4538663 | Msa1136250:CDS | 55.0% | |
| !! | GCAAGGGCCTTCTGGTTCAA+AGG | - | chr7_4:4538683-4538702 | None:intergenic | 55.0% |
| CCAAATCAGCACCAAGGGCA+AGG | - | chr7_4:4538700-4538719 | None:intergenic | 55.0% | |
| !! | CCTTGCCCTTGGTGCTGATT+TGG | + | chr7_4:4538697-4538716 | Msa1136250:CDS | 55.0% |
| TTTGGGCGGTGCTCTTAACC+CGG | + | chr7_4:4538915-4538934 | Msa1136250:CDS | 55.0% | |
| ! | AGGCACATCCCAAGGTACCA+TGG | + | chr7_4:4539412-4539431 | Msa1136250:intron | 55.0% |
| ! | TCAGGATGACTTGGCAAGCC+TGG | - | chr7_4:4539991-4540010 | None:intergenic | 55.0% |
| CTTGCCATGAGGCAGATGAC+TGG | + | chr7_4:4540018-4540037 | Msa1136250:CDS | 55.0% | |
| !!! | GATGACTGGTTTTGGGGGTG+TGG | + | chr7_4:4540032-4540051 | Msa1136250:CDS | 55.0% |
| !! | TGGGGGTGTGGTCAGTTTTG+AGG | + | chr7_4:4540044-4540063 | Msa1136250:CDS | 55.0% |
| !!! | GGGTGTGGTCAGTTTTGAGG+TGG | + | chr7_4:4540047-4540066 | Msa1136250:intron | 55.0% |
| GCTCTCACAGCCACCAAATG+AGG | - | chr7_4:4540230-4540249 | None:intergenic | 55.0% | |
| !! | TGGTGGCTGTGAGAGCATTG+TGG | + | chr7_4:4540234-4540253 | Msa1136250:CDS | 55.0% |
| GGGACCTTCCTGCATCAGAA+AGG | + | chr7_4:4541111-4541130 | Msa1136250:intron | 55.0% | |
| TGGCCCTTTCTGATGCAGGA+AGG | - | chr7_4:4541118-4541137 | None:intergenic | 55.0% | |
| CACTTGGCCCTTTCTGATGC+AGG | - | chr7_4:4541122-4541141 | None:intergenic | 55.0% | |
| CTGCATCAGAAAGGGCCAAG+TGG | + | chr7_4:4541120-4541139 | Msa1136250:CDS | 55.0% | |
| !! | GCAGGCACTGGAAGCCATAT+AGG | + | chr7_4:4541214-4541233 | Msa1136250:CDS | 55.0% |
| GGGATCGGAACGGCATTCGA+AGG | - | chr7_4:4536010-4536029 | None:intergenic | 60.0% | |
| GTTGTCGGTGGATGGAAGGG+AGG | - | chr7_4:4536040-4536059 | None:intergenic | 60.0% | |
| GAGGATTGGGGAGGAGATGG+CGG | - | chr7_4:4536115-4536134 | None:intergenic | 60.0% | |
| ACGGAGGATTGGGGAGGAGA+TGG | - | chr7_4:4536118-4536137 | None:intergenic | 60.0% | |
| GCTGCAGTTACGACGCGCTT+TGG | - | chr7_4:4536172-4536191 | None:intergenic | 60.0% | |
| GAAGGAACTGGGAACCCCAG+CGG | + | chr7_4:4536234-4536253 | Msa1136250:CDS | 60.0% | |
| TTTCGCTGGGGTTCCGACTC+CGG | + | chr7_4:4536257-4536276 | Msa1136250:CDS | 60.0% | |
| GACATCGCCATCGGCGACAT+CGG | - | chr7_4:4536343-4536362 | None:intergenic | 60.0% | |
| GTCACAAGATGTCCACCGGC+TGG | - | chr7_4:4537894-4537913 | None:intergenic | 60.0% | |
| AACCAGAAGGCCCTTGCCCT+TGG | + | chr7_4:4538686-4538705 | Msa1136250:CDS | 60.0% | |
| GGCTGATGTCTTGCAGGCAC+TGG | + | chr7_4:4541202-4541221 | Msa1136250:CDS | 60.0% | |
| CGGAGGCGAGGGAGGTTGTT+GGG | - | chr7_4:4536089-4536108 | None:intergenic | 65.0% | |
| ! | GATTGGGGAGGAGATGGCGG+CGG | - | chr7_4:4536112-4536131 | None:intergenic | 65.0% |
| GGAACCCCAGCGGTTTCGCT+GGG | + | chr7_4:4536244-4536263 | Msa1136250:CDS | 65.0% | |
| GAACCCCAGCGGTTTCGCTG+GGG | + | chr7_4:4536245-4536264 | Msa1136250:CDS | 65.0% | |
| GAACCCCAGCGAAACCGCTG+GGG | - | chr7_4:4536251-4536270 | None:intergenic | 65.0% | |
| GGAACCCCAGCGAAACCGCT+GGG | - | chr7_4:4536252-4536271 | None:intergenic | 65.0% | |
| GCAGATGCAACAGCCGGCAC+CGG | - | chr7_4:4536279-4536298 | None:intergenic | 65.0% | |
| GCGTCGAGGTCTAACGGCAC+CGG | - | chr7_4:4536321-4536340 | None:intergenic | 65.0% | |
| !! | CTGATGGCGCTGGTTCCAGC+CGG | + | chr7_4:4537876-4537895 | Msa1136250:CDS | 65.0% |
| CACCAAGGGCAAGGGCCTTC+TGG | - | chr7_4:4538691-4538710 | None:intergenic | 65.0% | |
| GCGGAGGCGAGGGAGGTTGT+TGG | - | chr7_4:4536090-4536109 | None:intergenic | 70.0% | |
| GGGAACCCCAGCGGTTTCGC+TGG | + | chr7_4:4536243-4536262 | Msa1136250:CDS | 70.0% | |
| CGGAACCCCAGCGAAACCGC+TGG | - | chr7_4:4536253-4536272 | None:intergenic | 70.0% | |
| TGGGGTTCCGACTCCGGTGC+CGG | + | chr7_4:4536263-4536282 | Msa1136250:CDS | 70.0% | |
| ! | GCAACAGCCGGCACCGGAGT+CGG | - | chr7_4:4536273-4536292 | None:intergenic | 70.0% |
| CATCGGCGACATCGGCGTCG+AGG | - | chr7_4:4536335-4536354 | None:intergenic | 70.0% | |
| CTCGACGCCGATGTCGCCGA+TGG | + | chr7_4:4536333-4536352 | Msa1136250:CDS | 70.0% | |
| !! | ATGGCGCTGGTTCCAGCCGG+TGG | + | chr7_4:4537879-4537898 | Msa1136250:CDS | 70.0% |
| ! | TGGGGAGGAGATGGCGGCGG+CGG | - | chr7_4:4536109-4536128 | None:intergenic | 75.0% |
| !! | GATGGCGGCGGCGGAGGCGA+GGG | - | chr7_4:4536100-4536119 | None:intergenic | 80.0% |
| !! | AGATGGCGGCGGCGGAGGCG+AGG | - | chr7_4:4536101-4536120 | None:intergenic | 80.0% |
| !! | GGAGGAGATGGCGGCGGCGG+AGG | - | chr7_4:4536106-4536125 | None:intergenic | 80.0% |
| ! | GGCGGCGGCGGAGGCGAGGG+AGG | - | chr7_4:4536097-4536116 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 4535884 | 4541633 | 4535884 | ID=Msa1136250;Name=Msa1136250 |
| chr7_4 | mRNA | 4535884 | 4541633 | 4535884 | ID=Msa1136250-mRNA-1;Parent=Msa1136250;Name=Msa1136250-mRNA-1;_AED=0.05;_eAED=0.05;_QI=92|1|1|1|1|1|11|398|537 |
| chr7_4 | exon | 4535884 | 4536444 | 4535884 | ID=Msa1136250-mRNA-1:exon:1176;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4537065 | 4537168 | 4537065 | ID=Msa1136250-mRNA-1:exon:1177;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4537636 | 4537709 | 4537636 | ID=Msa1136250-mRNA-1:exon:1178;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4537812 | 4537980 | 4537812 | ID=Msa1136250-mRNA-1:exon:1179;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4538411 | 4538470 | 4538411 | ID=Msa1136250-mRNA-1:exon:1180;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4538557 | 4538760 | 4538557 | ID=Msa1136250-mRNA-1:exon:1181;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4538850 | 4538936 | 4538850 | ID=Msa1136250-mRNA-1:exon:1182;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4539318 | 4539425 | 4539318 | ID=Msa1136250-mRNA-1:exon:1183;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4539970 | 4540065 | 4539970 | ID=Msa1136250-mRNA-1:exon:1184;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4540163 | 4540281 | 4540163 | ID=Msa1136250-mRNA-1:exon:1185;Parent=Msa1136250-mRNA-1 |
| chr7_4 | exon | 4541112 | 4541633 | 4541112 | ID=Msa1136250-mRNA-1:exon:1186;Parent=Msa1136250-mRNA-1 |
| chr7_4 | five_prime_UTR | 4535884 | 4535975 | 4535884 | ID=Msa1136250-mRNA-1:five_prime_utr;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4535976 | 4536444 | 4535976 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4537065 | 4537168 | 4537065 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4537636 | 4537709 | 4537636 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4537812 | 4537980 | 4537812 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4538411 | 4538470 | 4538411 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4538557 | 4538760 | 4538557 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4538850 | 4538936 | 4538850 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4539318 | 4539425 | 4539318 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4539970 | 4540065 | 4539970 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4540163 | 4540281 | 4540163 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | CDS | 4541112 | 4541235 | 4541112 | ID=Msa1136250-mRNA-1:cds;Parent=Msa1136250-mRNA-1 |
| chr7_4 | three_prime_UTR | 4541236 | 4541633 | 4541236 | ID=Msa1136250-mRNA-1:three_prime_utr;Parent=Msa1136250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
