Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049030 | XP_003621272.1 | 98.883 | 537 | 4 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1096 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049030 | sp|P55217|CGS1_ARATH | 79.753 | 405 | 81 | 1 | 133 | 537 | 160 | 563 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049030 | G7L227 | 98.883 | 537 | 4 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1096 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0618020 | Msa1049030 | 0.805141 | 1.540773e-49 | -8.615850e-47 |
| Msa0701040 | Msa1049030 | 0.814973 | 1.172612e-51 | -8.615850e-47 |
| Msa1007370 | Msa1049030 | 0.906489 | 1.404904e-80 | -8.615850e-47 |
| Msa1049030 | Msa1087400 | 0.930399 | 1.734320e-93 | -8.615850e-47 |
| Msa1049030 | Msa1136250 | 0.813718 | 2.221667e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049030 | MtrunA17_Chr7g0217761 | 98.883 | 537 | 4 | 1 | 1 | 537 | 1 | 535 | 0.0 | 1096 |
| Msa1049030 | MtrunA17_Chr6g0453481 | 76.355 | 406 | 94 | 2 | 132 | 537 | 74 | 477 | 0.0 | 660 |
| Msa1049030 | MtrunA17_Chr1g0181151 | 36.391 | 338 | 211 | 4 | 198 | 534 | 129 | 463 | 7.60e-70 | 231 |
| Msa1049030 | MtrunA17_Chr3g0119851 | 29.730 | 333 | 219 | 7 | 198 | 519 | 92 | 420 | 2.23e-39 | 149 |
| Msa1049030 | MtrunA17_Chr1g0189071 | 28.743 | 334 | 222 | 8 | 198 | 519 | 93 | 422 | 1.11e-36 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049030 | AT3G01120.1 | 79.753 | 405 | 81 | 1 | 133 | 537 | 160 | 563 | 0.0 | 687 |
| Msa1049030 | AT1G33320.1 | 69.816 | 381 | 114 | 1 | 157 | 537 | 33 | 412 | 0.0 | 562 |
| Msa1049030 | AT1G33320.2 | 70.430 | 372 | 109 | 1 | 166 | 537 | 3 | 373 | 0.0 | 556 |
| Msa1049030 | AT1G33320.3 | 70.948 | 327 | 94 | 1 | 211 | 537 | 3 | 328 | 2.47e-173 | 492 |
| Msa1049030 | AT3G57050.4 | 34.795 | 365 | 226 | 6 | 167 | 530 | 46 | 399 | 4.27e-70 | 231 |
| Msa1049030 | AT3G57050.5 | 34.795 | 365 | 226 | 6 | 167 | 530 | 24 | 377 | 4.69e-70 | 230 |
| Msa1049030 | AT3G57050.2 | 34.795 | 365 | 226 | 6 | 167 | 530 | 87 | 440 | 1.19e-69 | 231 |
| Msa1049030 | AT3G57050.1 | 34.795 | 365 | 226 | 6 | 167 | 530 | 102 | 455 | 1.38e-69 | 231 |
| Msa1049030 | AT3G57050.3 | 34.397 | 282 | 174 | 5 | 167 | 447 | 102 | 373 | 2.65e-51 | 180 |
| Msa1049030 | AT1G64660.1 | 29.429 | 333 | 221 | 7 | 198 | 519 | 93 | 422 | 8.48e-40 | 150 |
Find 188 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGGCAGATGACTGGTTT+TGG | 0.206527 | 7_2:+11777367 | Msa1049030:CDS |
| ATTAATTCCTTGAACTGATT+TGG | 0.218651 | 7_2:+11778680 | Msa1049030:three_prime_UTR |
| GATGGCGATGTCGTCGAAAA+TGG | 0.220327 | 7_2:+11773656 | Msa1049030:CDS |
| CCAAATGAGGCAGCAATATA+TGG | 0.229851 | 7_2:-11777557 | None:intergenic |
| GTGGAAGATTTATGACAATT+TGG | 0.239016 | 7_2:+11778482 | Msa1049030:CDS |
| TTGATTATGGCTTATTTGTT+GGG | 0.263165 | 7_2:-11778897 | None:intergenic |
| CGTCAAACTAGTTATGAATA+TGG | 0.263385 | 7_2:+11774926 | Msa1049030:CDS |
| CAGATACACGCAGCAAATAC+TGG | 0.264776 | 7_2:-11778652 | None:intergenic |
| GCTGAGTTGACGTTGGAAAT+TGG | 0.265209 | 7_2:-11773450 | None:intergenic |
| TTCACATTCATTTCATCATT+TGG | 0.278874 | 7_2:+11773183 | None:intergenic |
| TGGGAGGAAAACGGAGGATT+GGG | 0.280235 | 7_2:-11773430 | None:intergenic |
| TTTGATTATGGCTTATTTGT+TGG | 0.285879 | 7_2:-11778898 | None:intergenic |
| TTCTTTCTGGTTCAGGTACT+TGG | 0.288738 | 7_2:+11776119 | Msa1049030:intron |
| CACCAAGGGCAAGGGCCTTC+TGG | 0.291162 | 7_2:-11775972 | None:intergenic |
| TAGCCTTAGATCTTTGATTA+TGG | 0.297456 | 7_2:-11778910 | None:intergenic |
| CCTTGCCCTTGGTGCTGATT+TGG | 0.297489 | 7_2:+11775981 | Msa1049030:CDS |
| TTAATTCCTTGAACTGATTT+GGG | 0.303748 | 7_2:+11778681 | Msa1049030:three_prime_UTR |
| CATACCTTGATCCCCATCTT+TGG | 0.307990 | 7_2:-11775247 | None:intergenic |
| CAACCCAACCAGTACTGTTT+TGG | 0.308335 | 7_2:+11774958 | Msa1049030:CDS |
| CCATATATTGCTGCCTCATT+TGG | 0.309206 | 7_2:+11777557 | Msa1049030:CDS |
| AATAATGAATAGTGCCTATA+TGG | 0.313919 | 7_2:-11778571 | None:intergenic |
| TGGAGCCTTGCAATCTGCTT+TGG | 0.315672 | 7_2:+11775721 | Msa1049030:CDS |
| TGGGGAGGAGATGGCGGCGG+CGG | 0.319848 | 7_2:-11773411 | None:intergenic |
| CACTTCAACATTACAATCAT+AGG | 0.326473 | 7_2:-11778815 | None:intergenic |
| TGACTACTACTGATTGTTAC+AGG | 0.328186 | 7_2:+11775194 | Msa1049030:CDS |
| CAGAACTTTGCCACAAGAAT+GGG | 0.332287 | 7_2:+11775908 | Msa1049030:CDS |
| CACTTGGCCCTTTCTGATGC+AGG | 0.349298 | 7_2:-11778462 | None:intergenic |
| TTTGAAGGCTGATGTCTTGC+AGG | 0.352504 | 7_2:+11778539 | Msa1049030:CDS |
| TCAACTATCTTGATGGCATC+TGG | 0.354904 | 7_2:+11775115 | Msa1049030:CDS |
| GGAGGAGATGGCGGCGGCGG+AGG | 0.360680 | 7_2:-11773408 | None:intergenic |
| GGATGGAAGGGAGGTGAAAT+CGG | 0.370397 | 7_2:-11773333 | None:intergenic |
| AAGTTTGGCCATCCTCATTC+CGG | 0.375018 | 7_2:-11776670 | None:intergenic |
| ATGGCGATGTCGTCGAAAAT+GGG | 0.377789 | 7_2:+11773657 | Msa1049030:CDS |
| AAGCCATAATCAAAGATCTA+AGG | 0.379390 | 7_2:+11778907 | Msa1049030:three_prime_UTR |
| TGAGTACCAGTAAGACAAAA+TGG | 0.381061 | 7_2:-11777609 | None:intergenic |
| AACCAGAAGGCCCTTGCCCT+TGG | 0.386207 | 7_2:+11775970 | Msa1049030:CDS |
| GGGAACCCCAGCGGTGTCGC+TGG | 0.386906 | 7_2:+11773548 | Msa1049030:CDS |
| GGAACCCCAGCGGTGTCGCT+GGG | 0.387081 | 7_2:+11773549 | Msa1049030:CDS |
| GGGATGTGCCTCTAAAAGTT+TGG | 0.394303 | 7_2:-11776685 | None:intergenic |
| CTGAGTTGACGTTGGAAATT+GGG | 0.394633 | 7_2:-11773449 | None:intergenic |
| TTGCCTATAATGCAGATTGA+TGG | 0.397473 | 7_2:+11777491 | Msa1049030:intron |
| CATTCATTTCATCATTTGGT+TGG | 0.399205 | 7_2:+11773187 | None:intergenic |
| TTGGGAGGAAAACGGAGGAT+TGG | 0.403682 | 7_2:-11773431 | None:intergenic |
| GGAAATGACGACGGCGGTTG+TGG | 0.411184 | 7_2:-11773370 | None:intergenic |
| ATGATTGCGTAATGATGTAT+TGG | 0.413767 | 7_2:+11778751 | Msa1049030:three_prime_UTR |
| GGCTGATGTCTTGCAGGCAC+TGG | 0.415737 | 7_2:+11778545 | Msa1049030:CDS |
| GGGGCTTTGCTCGTCATTGA+TGG | 0.416380 | 7_2:+11775928 | Msa1049030:CDS |
| TCGTGGTCTAATGAAGGAAC+TGG | 0.416954 | 7_2:+11773527 | Msa1049030:CDS |
| TATATTGCTGCCTCATTTGG+TGG | 0.416975 | 7_2:+11777560 | Msa1049030:CDS |
| CTCATGGCAAGCTCATGTTC+AGG | 0.417754 | 7_2:-11777349 | None:intergenic |
| CGGAGGAGAGGGAGGTTGTT+GGG | 0.419778 | 7_2:-11773391 | None:intergenic |
| AATTTGGTTCGATTCAGCTT+TGG | 0.422581 | 7_2:+11778498 | Msa1049030:CDS |
| GATGGCGGCGGCGGAGGAGA+GGG | 0.423120 | 7_2:-11773402 | None:intergenic |
| TGGTGGTTGTTGTCGGTGGA+TGG | 0.427198 | 7_2:-11773350 | None:intergenic |
| CACAAATCGTCGCTGCTTCG+TGG | 0.427715 | 7_2:+11773510 | Msa1049030:CDS |
| GCGGTTGTGGTGGTTGTTGT+CGG | 0.430066 | 7_2:-11773357 | None:intergenic |
| GGTTGTTGTCGGTGGATGGA+AGG | 0.432338 | 7_2:-11773346 | None:intergenic |
| GCAGGCACTGGAAGCCATAT+AGG | 0.435135 | 7_2:+11778557 | Msa1049030:CDS |
| TCAGAACTTTGCCACAAGAA+TGG | 0.438377 | 7_2:+11775907 | Msa1049030:CDS |
| GGCTGAGTCAACTATCTTGA+TGG | 0.438443 | 7_2:+11775108 | Msa1049030:CDS |
| GCTGCAGTTACGACGCGCTT+TGG | 0.438927 | 7_2:-11773474 | None:intergenic |
| GCGGAGGAGAGGGAGGTTGT+TGG | 0.439828 | 7_2:-11773392 | None:intergenic |
| TCATTATTGAATCAGTGAAC+TGG | 0.440444 | 7_2:+11775081 | Msa1049030:intron |
| GGGAGGAAAACGGAGGATTG+GGG | 0.442254 | 7_2:-11773429 | None:intergenic |
| AGAGACTGTTCTTCCAAAGA+TGG | 0.448366 | 7_2:+11775234 | Msa1049030:CDS |
| TCAGGATGACTTGGCAAGCC+TGG | 0.449767 | 7_2:-11777331 | None:intergenic |
| CATAGTCTTGCTGATGGCGC+TGG | 0.451246 | 7_2:+11775150 | Msa1049030:CDS |
| GATGGAAGGGAGGTGAAATC+GGG | 0.452446 | 7_2:-11773332 | None:intergenic |
| CCTCCAAAACAGTACTGGTT+GGG | 0.455886 | 7_2:-11774961 | None:intergenic |
| TGATTGCGTAATGATGTATT+GGG | 0.466351 | 7_2:+11778752 | Msa1049030:three_prime_UTR |
| GTGAAGCGTGTCTACTATCC+AGG | 0.468909 | 7_2:+11777313 | Msa1049030:CDS |
| GTCAAACTAGTTATGAATAT+GGG | 0.469406 | 7_2:+11774927 | Msa1049030:CDS |
| AGATGGCGGCGGCGGAGGAG+AGG | 0.474313 | 7_2:-11773403 | None:intergenic |
| CTTCTCCTCCAAAACAGTAC+TGG | 0.475513 | 7_2:-11774966 | None:intergenic |
| TTGGTTGGTGTAGAGGAAGT+AGG | 0.476270 | 7_2:+11773202 | Msa1049030:five_prime_UTR |
| GAGGATTGGGGAGGAGATGG+CGG | 0.478026 | 7_2:-11773417 | None:intergenic |
| ACGGAGGATTGGGGAGGAGA+TGG | 0.478713 | 7_2:-11773420 | None:intergenic |
| AGCAGATGCAACAGCCGGCA+CGG | 0.483695 | 7_2:-11773582 | None:intergenic |
| TTTCTGGTTCAGGTACTTGG+TGG | 0.484362 | 7_2:+11776122 | Msa1049030:intron |
| TGAATCAATAAATTTAATTG+TGG | 0.490973 | 7_2:-11777525 | None:intergenic |
| GAGACTGTTCTTCCAAAGAT+GGG | 0.491918 | 7_2:+11775235 | Msa1049030:CDS |
| CAAATGAGGCAGCAATATAT+GGG | 0.493478 | 7_2:-11777556 | None:intergenic |
| GTACTTGGTGGTTGCATCAG+TGG | 0.493649 | 7_2:+11776134 | Msa1049030:CDS |
| GTTGTTGTCGGTGGATGGAA+GGG | 0.495764 | 7_2:-11773345 | None:intergenic |
| AGGAAAACGGAGGATTGGGG+AGG | 0.496197 | 7_2:-11773426 | None:intergenic |
| TGCAAGGCTCCAACATCAGC+AGG | 0.497319 | 7_2:-11775710 | None:intergenic |
| GATTGGGGAGGAGATGGCGG+CGG | 0.497453 | 7_2:-11773414 | None:intergenic |
| TGATTATGGCTTATTTGTTG+GGG | 0.499013 | 7_2:-11778896 | None:intergenic |
| AGAACACCCAAATCAGTTCA+AGG | 0.499699 | 7_2:-11778687 | None:intergenic |
| AGCTCATGTTCAGGATGACT+TGG | 0.511225 | 7_2:-11777340 | None:intergenic |
| GTACAGCAACAGAATTCAAC+CGG | 0.512244 | 7_2:+11776651 | Msa1049030:CDS |
| CAACTATCTTGATGGCATCT+GGG | 0.519100 | 7_2:+11775116 | Msa1049030:CDS |
| ATGGCGCTGGTTCCAGCCGG+TGG | 0.519978 | 7_2:+11775163 | Msa1049030:CDS |
| TCCTCCAAAACAGTACTGGT+TGG | 0.520178 | 7_2:-11774962 | None:intergenic |
| TCATCATTTGGTTGGTGTAG+AGG | 0.521132 | 7_2:+11773195 | Msa1049030:five_prime_UTR |
| TGGCTCTTTGAAGTTGATCT+CGG | 0.521731 | 7_2:+11776154 | Msa1049030:CDS |
| CTGATGGCGCTGGTTCCAGC+CGG | 0.524673 | 7_2:+11775160 | Msa1049030:CDS |
| CTGATTGTTACAGGAAGACT+AGG | 0.526898 | 7_2:+11775203 | Msa1049030:CDS |
| TCTTCCAAAGATGGGGATCA+AGG | 0.529385 | 7_2:+11775243 | Msa1049030:CDS |
| GTTGTGGTGGTTGTTGTCGG+TGG | 0.532101 | 7_2:-11773354 | None:intergenic |
| GTCACAAGATGTCCACCGGC+TGG | 0.532380 | 7_2:-11775175 | None:intergenic |
| GTTGTCGGTGGATGGAAGGG+AGG | 0.538750 | 7_2:-11773342 | None:intergenic |
| GACATCGCCATCGGCGACAT+CGG | 0.538785 | 7_2:-11773645 | None:intergenic |
| GCAACAGCCGGCACGGGAGT+CGG | 0.542578 | 7_2:-11773575 | None:intergenic |
| GCTTAATGTCAACACATCTC+AGG | 0.544187 | 7_2:-11775879 | None:intergenic |
| TTGAATCAGTGAACTGGAAG+GGG | 0.544987 | 7_2:+11775087 | Msa1049030:intron |
| GGACCTTCCTGCATCAGAAA+GGG | 0.545206 | 7_2:+11778455 | Msa1049030:CDS |
| GGTGTAGAGGAAGTAGGTGT+AGG | 0.546764 | 7_2:+11773208 | Msa1049030:five_prime_UTR |
| TGGGGTTCCGACTCCCGTGC+CGG | 0.546807 | 7_2:+11773568 | Msa1049030:CDS |
| GGGACCTTCCTGCATCAGAA+AGG | 0.547983 | 7_2:+11778454 | Msa1049030:intron |
| CCAAATCAGCACCAAGGGCA+AGG | 0.548480 | 7_2:-11775981 | None:intergenic |
| CATCTCAGGAATGGATTGGT+AGG | 0.550373 | 7_2:-11775865 | None:intergenic |
| CTTGCCATGAGGCAGATGAC+TGG | 0.550800 | 7_2:+11777361 | Msa1049030:CDS |
| GCAAGGGCCTTCTGGTTCAA+AGG | 0.551371 | 7_2:-11775964 | None:intergenic |
| TGGCCCTTTCTGATGCAGGA+AGG | 0.552383 | 7_2:-11778458 | None:intergenic |
| AGTTATGAATATGGGCGCTA+TGG | 0.552948 | 7_2:+11774935 | Msa1049030:CDS |
| TATTATGCAGCTGAGAGACT+TGG | 0.553724 | 7_2:+11774327 | Msa1049030:intron |
| TTTGGGCGGTGCTCTTAACC+CGG | 0.553808 | 7_2:+11776199 | Msa1049030:CDS |
| TGTTGATGCAACAACTGCGC+CGG | 0.554809 | 7_2:+11773604 | Msa1049030:CDS |
| GAGATGTGTTGACATTAAGC+TGG | 0.555073 | 7_2:+11775882 | Msa1049030:CDS |
| TCAACAGCAGATGCAACAGC+CGG | 0.555637 | 7_2:-11773587 | None:intergenic |
| GGCGGCGGCGGAGGAGAGGG+AGG | 0.557923 | 7_2:-11773399 | None:intergenic |
| ATGTCAACACATCTCAGGAA+TGG | 0.560252 | 7_2:-11775874 | None:intergenic |
| GCAGATGCAACAGCCGGCAC+GGG | 0.560392 | 7_2:-11773581 | None:intergenic |
| AATGACGACGGCGGTTGTGG+TGG | 0.561201 | 7_2:-11773367 | None:intergenic |
| GTTGGAAATTGGGAGGAAAA+CGG | 0.561987 | 7_2:-11773439 | None:intergenic |
| ATCTGCTTTGGAGCAGAACA+AGG | 0.562254 | 7_2:+11775733 | Msa1049030:CDS |
| AACGCGGTGGAAACTTGAAA+CGG | 0.568103 | 7_2:-11773285 | None:intergenic |
| AACACATCTCAGGAATGGAT+TGG | 0.568381 | 7_2:-11775869 | None:intergenic |
| CTGCTCCAAAGCAGATTGCA+AGG | 0.570077 | 7_2:-11775726 | None:intergenic |
| GCGTCGAGGTCTAACGGCAC+CGG | 0.570156 | 7_2:-11773623 | None:intergenic |
| AACAGAATTCAACCGGAATG+AGG | 0.571836 | 7_2:+11776658 | Msa1049030:CDS |
| TACCAGTAAGACAAAATGGC+TGG | 0.573561 | 7_2:-11777605 | None:intergenic |
| CGTCGTAACTGCAGCAACAT+CGG | 0.574560 | 7_2:+11773482 | Msa1049030:CDS |
| CTTTGGTGCTGAGTTGACGT+TGG | 0.575034 | 7_2:-11773457 | None:intergenic |
| CAAATCAGCACCAAGGGCAA+GGG | 0.575071 | 7_2:-11775980 | None:intergenic |
| GTGGTTGATCCTGCTGATGT+TGG | 0.576280 | 7_2:+11775701 | Msa1049030:CDS |
| GCTCTCACAGCCACCAAATG+AGG | 0.577161 | 7_2:-11777570 | None:intergenic |
| TAGGCAGAAGTGTTCACCAC+AGG | 0.578051 | 7_2:-11774381 | None:intergenic |
| GCTGCTTCGTGGTCTAATGA+AGG | 0.578161 | 7_2:+11773521 | Msa1049030:CDS |
| AGATACACGCAGCAAATACT+GGG | 0.579391 | 7_2:-11778651 | None:intergenic |
| AAGGGAGGTGAAATCGGGAT+CGG | 0.583036 | 7_2:-11773327 | None:intergenic |
| ACATCGGCGTCGAGGTCTAA+CGG | 0.585435 | 7_2:-11773629 | None:intergenic |
| ATTGAATCAGTGAACTGGAA+GGG | 0.588819 | 7_2:+11775086 | Msa1049030:intron |
| CGTGGTCTAATGAAGGAACT+GGG | 0.591097 | 7_2:+11773528 | Msa1049030:CDS |
| TGCAGCTGAGAGACTTGGTA+GGG | 0.591730 | 7_2:+11774332 | Msa1049030:intron |
| TGCTACGCCTTTGAACCAGA+AGG | 0.592523 | 7_2:+11775957 | Msa1049030:CDS |
| GAATGGATTGGTAGGAGACT+CGG | 0.593229 | 7_2:-11775857 | None:intergenic |
| GAATTCAACCGGAATGAGGA+TGG | 0.593368 | 7_2:+11776662 | Msa1049030:CDS |
| CGAGCAAAGCCCCATTCTTG+TGG | 0.593385 | 7_2:-11775918 | None:intergenic |
| CATAACCAAATCAGCACCAA+GGG | 0.599807 | 7_2:-11775986 | None:intergenic |
| AGGTGAAATCGGGATCGGAA+CGG | 0.600745 | 7_2:-11773322 | None:intergenic |
| GTATTTGCTGCGTGTATCTG+CGG | 0.603788 | 7_2:+11778655 | Msa1049030:three_prime_UTR |
| ATGCAGCTGAGAGACTTGGT+AGG | 0.605179 | 7_2:+11774331 | Msa1049030:intron |
| TATTGAATCAGTGAACTGGA+AGG | 0.608896 | 7_2:+11775085 | Msa1049030:intron |
| TGGTGGCTGTGAGAGCATTG+TGG | 0.610822 | 7_2:+11777577 | Msa1049030:CDS |
| GGTAGGGCTATTGTGACTGA+TGG | 0.611008 | 7_2:+11774348 | Msa1049030:CDS |
| AGTAGTCACAAGATGTCCAC+CGG | 0.611288 | 7_2:-11775179 | None:intergenic |
| CTCGACGCCGATGTCGCCGA+TGG | 0.612253 | 7_2:+11773638 | Msa1049030:CDS |
| TGCTAGCATAGTCTTGCTGA+TGG | 0.614200 | 7_2:+11775144 | Msa1049030:CDS |
| AAAACCAGTCATCTGCCTCA+TGG | 0.617037 | 7_2:-11777365 | None:intergenic |
| AAAACGAAGAATAAGAACTA+CGG | 0.621949 | 7_2:-11773694 | None:intergenic |
| AGAACTTTGCCACAAGAATG+GGG | 0.622700 | 7_2:+11775909 | Msa1049030:CDS |
| CCTTATTGAGCAGACATCCG+TGG | 0.625339 | 7_2:+11775682 | Msa1049030:intron |
| GGGATCGGAACGGCATTCGA+AGG | 0.627492 | 7_2:-11773312 | None:intergenic |
| TGGCGATGTCGTCGAAAATG+GGG | 0.634408 | 7_2:+11773658 | Msa1049030:CDS |
| GCAAGCAAAACGATTCATGC+CGG | 0.638119 | 7_2:+11773728 | Msa1049030:CDS |
| AGTTGACGTTGGAAATTGGG+AGG | 0.639123 | 7_2:-11773446 | None:intergenic |
| CACTCTTGTACGAAGTACAT+CGG | 0.640138 | 7_2:+11776009 | Msa1049030:CDS |
| ATTGTCATAAATCTTCCACT+TGG | 0.643061 | 7_2:-11778478 | None:intergenic |
| GAACCCCAGCGGTGTCGCTG+GGG | 0.643863 | 7_2:+11773550 | Msa1049030:CDS |
| AGAAGTGTTCACCACAGGAG+TGG | 0.645583 | 7_2:-11774376 | None:intergenic |
| CTGCATCAGAAAGGGCCAAG+TGG | 0.649606 | 7_2:+11778463 | Msa1049030:CDS |
| AGACTGTTCTTCCAAAGATG+GGG | 0.658293 | 7_2:+11775236 | Msa1049030:CDS |
| CATCGGCGACATCGGCGTCG+AGG | 0.660124 | 7_2:-11773637 | None:intergenic |
| GCTGCATACCTATTCATCAG+AGG | 0.677803 | 7_2:+11776606 | Msa1049030:CDS |
| GAACCCCAGCGACACCGCTG+GGG | 0.678123 | 7_2:-11773553 | None:intergenic |
| AGGTTGTTGGGAAATGACGA+CGG | 0.687100 | 7_2:-11773379 | None:intergenic |
| GCATAACCAAATCAGCACCA+AGG | 0.689976 | 7_2:-11775987 | None:intergenic |
| TGATGGAATTACCACTCCTG+TGG | 0.690564 | 7_2:+11774365 | Msa1049030:CDS |
| AACATCAGCAGGATCAACCA+CGG | 0.691119 | 7_2:-11775699 | None:intergenic |
| TCTTGTACGAAGTACATCGG+TGG | 0.698870 | 7_2:+11776012 | Msa1049030:CDS |
| CTGAACATGAGCTTGCCATG+AGG | 0.711855 | 7_2:+11777350 | Msa1049030:CDS |
| GGAAATTGGGAGGAAAACGG+AGG | 0.714797 | 7_2:-11773436 | None:intergenic |
| GGCATTCGAAGGTGAAAACG+CGG | 0.732442 | 7_2:-11773301 | None:intergenic |
| GAAGGAACTGGGAACCCCAG+CGG | 0.741919 | 7_2:+11773539 | Msa1049030:CDS |
| ATTCGAAGGTGAAAACGCGG+TGG | 0.746724 | 7_2:-11773298 | None:intergenic |
| TTGTTGGGAAATGACGACGG+CGG | 0.814028 | 7_2:-11773376 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTATTTTTTAATTT+TGG | + | chr7_2:11774454-11774473 | Msa1049030:intron | 0.0% |
| !! | AAAAAAATAAAAAAAAAAAA+AGG | - | chr7_2:11778096-11778115 | None:intergenic | 0.0% |
| !!! | TTGAAATTTTTCTTATATTA+AGG | + | chr7_2:11776499-11776518 | Msa1049030:intron | 10.0% |
| !!! | TAATAATAAGTGTTATTATA+AGG | + | chr7_2:11776877-11776896 | Msa1049030:intron | 10.0% |
| !!! | ATTATTTACTTTTTTACATT+TGG | + | chr7_2:11778164-11778183 | Msa1049030:intron | 10.0% |
| !!! | TTTTTTTTAAACAATAATCT+AGG | + | chr7_2:11778865-11778884 | Msa1049030:three_prime_UTR | 10.0% |
| !!! | TTTTTTTAAACAATAATCTA+GGG | + | chr7_2:11778866-11778885 | Msa1049030:three_prime_UTR | 10.0% |
| !!! | TAGTTTTAATTTCAAAGATT+AGG | + | chr7_2:11773885-11773904 | Msa1049030:intron | 15.0% |
| !!! | AAAGATTAGGTTAATTTTAT+CGG | + | chr7_2:11773898-11773917 | Msa1049030:intron | 15.0% |
| !!! | TAATTTTATATGCTAAAAAG+TGG | + | chr7_2:11774054-11774073 | Msa1049030:intron | 15.0% |
| !! | ATATATCCATTTCAAATATT+GGG | - | chr7_2:11775556-11775575 | None:intergenic | 15.0% |
| !!! | AAAAATTTCAAAAGAAGTTT+TGG | - | chr7_2:11776490-11776509 | None:intergenic | 15.0% |
| !!! | TATTTTAAAGACAAACAAAA+TGG | + | chr7_2:11776969-11776988 | Msa1049030:intron | 15.0% |
| !!! | CTTTTTTAATATTAACCTTT+GGG | + | chr7_2:11777102-11777121 | Msa1049030:intron | 15.0% |
| !! | TGAATCAATAAATTTAATTG+TGG | - | chr7_2:11777528-11777547 | None:intergenic | 15.0% |
| !! | AAAGTGGAAAAAAAAAATAA+AGG | - | chr7_2:11778300-11778319 | None:intergenic | 15.0% |
| !! | ATAATTAAAAATTCCCATAC+CGG | - | chr7_2:11773750-11773769 | None:intergenic | 20.0% |
| !!! | TATGACTAGTTTTTGTTTTT+TGG | + | chr7_2:11773958-11773977 | Msa1049030:intron | 20.0% |
| !!! | AGGAATATAATTTTAGAAAG+TGG | + | chr7_2:11774086-11774105 | Msa1049030:intron | 20.0% |
| !!! | GGAATATAATTTTAGAAAGT+GGG | + | chr7_2:11774087-11774106 | Msa1049030:intron | 20.0% |
| !!! | TGAATGAATTTGTTATGTAA+GGG | + | chr7_2:11774669-11774688 | Msa1049030:intron | 20.0% |
| !!! | AATTGTTTTAATTGAAAGTG+TGG | + | chr7_2:11775374-11775393 | Msa1049030:intron | 20.0% |
| !!! | ATCATACTTTGTAATTTTGT+CGG | + | chr7_2:11775522-11775541 | Msa1049030:intron | 20.0% |
| !!! | TTTTAACCCAATATTTGAAA+TGG | + | chr7_2:11775547-11775566 | Msa1049030:intron | 20.0% |
| !! | GATATATCCATTTCAAATAT+TGG | - | chr7_2:11775557-11775576 | None:intergenic | 20.0% |
| !! | TTGAAATGGATATATCTAAT+TGG | + | chr7_2:11775561-11775580 | Msa1049030:intron | 20.0% |
| !!! | TGTAAACTATTTTAAAGAAC+AGG | - | chr7_2:11776065-11776084 | None:intergenic | 20.0% |
| !!! | TGGTTTTTCTTCTTATATTA+AGG | - | chr7_2:11776274-11776293 | None:intergenic | 20.0% |
| !!! | TGAGACATTTTCTTATAAAT+AGG | + | chr7_2:11776463-11776482 | Msa1049030:intron | 20.0% |
| !!! | ATTTTTCTTATATTAAGGAC+CGG | + | chr7_2:11776504-11776523 | Msa1049030:intron | 20.0% |
| !! | ACAATAATAGTATTGTTCTA+TGG | - | chr7_2:11776555-11776574 | None:intergenic | 20.0% |
| !!! | TGATATTTTGTATTAGTAAC+TGG | + | chr7_2:11776728-11776747 | Msa1049030:intron | 20.0% |
| !!! | GATATTTTGTATTAGTAACT+GGG | + | chr7_2:11776729-11776748 | Msa1049030:intron | 20.0% |
| !! | ATATTAAAAAAGGAAAATGC+TGG | - | chr7_2:11777094-11777113 | None:intergenic | 20.0% |
| !! | CCAAAGGTTAATATTAAAAA+AGG | - | chr7_2:11777104-11777123 | None:intergenic | 20.0% |
| !!! | CCTTTTTTAATATTAACCTT+TGG | + | chr7_2:11777101-11777120 | Msa1049030:intron | 20.0% |
| !!! | AACTTTCAATTCTATTTCTT+AGG | - | chr7_2:11778009-11778028 | None:intergenic | 20.0% |
| !! | AAGAAATAGAATTGAAAGTT+TGG | + | chr7_2:11778009-11778028 | Msa1049030:intron | 20.0% |
| !!! | ATTGTTTTAATTACTTACCT+GGG | + | chr7_2:11778388-11778407 | Msa1049030:intron | 20.0% |
| ! | AAAACGAAGAATAAGAACTA+CGG | - | chr7_2:11773697-11773716 | None:intergenic | 25.0% |
| !! | CTAAAAAGTGGTTTAGTTTA+AGG | + | chr7_2:11774066-11774085 | Msa1049030:intron | 25.0% |
| ! | GTGGGAATCTAATAAAAAAT+TGG | + | chr7_2:11774105-11774124 | Msa1049030:intron | 25.0% |
| !! | AAATCTGAATCTTTCTCTTT+TGG | - | chr7_2:11774168-11774187 | None:intergenic | 25.0% |
| !! | AGCAGTTTTCTTAAAAAAGT+AGG | - | chr7_2:11774403-11774422 | None:intergenic | 25.0% |
| !!! | TGCTGATCTTATTGATTTTA+AGG | + | chr7_2:11774419-11774438 | Msa1049030:CDS | 25.0% |
| !!! | GTGAATGAATTTGTTATGTA+AGG | + | chr7_2:11774668-11774687 | Msa1049030:intron | 25.0% |
| ! | TTTAGAAAAACATTCATAGC+TGG | - | chr7_2:11774884-11774903 | None:intergenic | 25.0% |
| !! | TCTAAATTTTATCACATTGC+AGG | + | chr7_2:11774898-11774917 | Msa1049030:intron | 25.0% |
| ! | GTCAAACTAGTTATGAATAT+GGG | + | chr7_2:11774927-11774946 | Msa1049030:CDS | 25.0% |
| !! | TTGTAATATTTGAAATGCTG+TGG | + | chr7_2:11775036-11775055 | Msa1049030:intron | 25.0% |
| !! | TCATACTTTGTAATTTTGTC+GGG | + | chr7_2:11775523-11775542 | Msa1049030:intron | 25.0% |
| ! | AATGGATATATCTAATTGGT+TGG | + | chr7_2:11775565-11775584 | Msa1049030:intron | 25.0% |
| ! | ATGGATATATCTAATTGGTT+GGG | + | chr7_2:11775566-11775585 | Msa1049030:intron | 25.0% |
| !! | TCGAATTTTGCATCATATTT+TGG | + | chr7_2:11776181-11776200 | Msa1049030:CDS | 25.0% |
| !! | CGAATTTTGCATCATATTTT+GGG | + | chr7_2:11776182-11776201 | Msa1049030:CDS | 25.0% |
| ! | TTTCTTCTTATATTAAGGAC+CGG | - | chr7_2:11776269-11776288 | None:intergenic | 25.0% |
| ! | AAAGATACAACAATTAATGC+TGG | - | chr7_2:11776316-11776335 | None:intergenic | 25.0% |
| ! | TGTTTCACAACATTCTATAA+GGG | - | chr7_2:11776360-11776379 | None:intergenic | 25.0% |
| ! | ATGTTTCACAACATTCTATA+AGG | - | chr7_2:11776361-11776380 | None:intergenic | 25.0% |
| !! | GTCTGACTTTTTAATATTAG+TGG | - | chr7_2:11776393-11776412 | None:intergenic | 25.0% |
| ! | AAAAAGTCAGACATTAAATG+AGG | + | chr7_2:11776401-11776420 | Msa1049030:intron | 25.0% |
| ! | AAAAGTCAGACATTAAATGA+GGG | + | chr7_2:11776402-11776421 | Msa1049030:intron | 25.0% |
| ! | AAAATATCATAGTAAAGCCA+TGG | - | chr7_2:11776717-11776736 | None:intergenic | 25.0% |
| ! | GTAATAATGTGTTCTACTAT+AGG | + | chr7_2:11777152-11777171 | Msa1049030:intron | 25.0% |
| ! | ATCAGTGACATTATACAAAA+AGG | - | chr7_2:11777228-11777247 | None:intergenic | 25.0% |
| ! | ATGAAATCATGCTATCATTA+CGG | - | chr7_2:11777255-11777274 | None:intergenic | 25.0% |
| !! | TAGTATGTTGTTGTTAATCA+TGG | - | chr7_2:11777283-11777302 | None:intergenic | 25.0% |
| ! | AACAACATACTATTATTTGC+AGG | + | chr7_2:11777291-11777310 | Msa1049030:intron | 25.0% |
| !!! | TGCTATAACAAAAAGCATTA+TGG | - | chr7_2:11777445-11777464 | None:intergenic | 25.0% |
| ! | CTAAGAAAGATTTCATTACA+GGG | - | chr7_2:11777714-11777733 | None:intergenic | 25.0% |
| ! | ACTAAGAAAGATTTCATTAC+AGG | - | chr7_2:11777715-11777734 | None:intergenic | 25.0% |
| ! | GTAATGAAATCTTTCTTAGT+TGG | + | chr7_2:11777715-11777734 | Msa1049030:intron | 25.0% |
| ! | ATTTAATAGACACTTCCATT+TGG | - | chr7_2:11777889-11777908 | None:intergenic | 25.0% |
| !!! | AAATGGAAGTGTCTATTAAA+TGG | + | chr7_2:11777888-11777907 | Msa1049030:intron | 25.0% |
| !!! | GGATAGTAGAATGTTTTTTT+GGG | + | chr7_2:11777959-11777978 | Msa1049030:intron | 25.0% |
| !!! | TAGAATGTTTTTTTGGGAAT+TGG | + | chr7_2:11777965-11777984 | Msa1049030:intron | 25.0% |
| !!! | AGAATGTTTTTTTGGGAATT+GGG | + | chr7_2:11777966-11777985 | Msa1049030:intron | 25.0% |
| !!! | TAGAATTGAAAGTTTGGTTT+TGG | + | chr7_2:11778015-11778034 | Msa1049030:intron | 25.0% |
| ! | GAAGAGATATATCAAGTAAA+TGG | - | chr7_2:11778199-11778218 | None:intergenic | 25.0% |
| ! | TTAATAGAAGTGAAAGTGAA+GGG | - | chr7_2:11778226-11778245 | None:intergenic | 25.0% |
| ! | TTTAATAGAAGTGAAAGTGA+AGG | - | chr7_2:11778227-11778246 | None:intergenic | 25.0% |
| !!! | CATTGTTTTAATTACTTACC+TGG | + | chr7_2:11778387-11778406 | Msa1049030:intron | 25.0% |
| ! | AACATTAAATACAGCTACAA+AGG | - | chr7_2:11778415-11778434 | None:intergenic | 25.0% |
| ! | AATAATGAATAGTGCCTATA+TGG | - | chr7_2:11778574-11778593 | None:intergenic | 25.0% |
| ! | GAGAAAAAGATAAATGTTTG+CGG | - | chr7_2:11778599-11778618 | None:intergenic | 25.0% |
| ! | ATTAATTCCTTGAACTGATT+TGG | + | chr7_2:11778680-11778699 | Msa1049030:three_prime_UTR | 25.0% |
| !! | TTAATTCCTTGAACTGATTT+GGG | + | chr7_2:11778681-11778700 | Msa1049030:three_prime_UTR | 25.0% |
| !! | TTTTAAACAATAATCTAGGG+TGG | + | chr7_2:11778869-11778888 | Msa1049030:three_prime_UTR | 25.0% |
| ! | TTGATTATGGCTTATTTGTT+GGG | - | chr7_2:11778900-11778919 | None:intergenic | 25.0% |
| ! | TTTGATTATGGCTTATTTGT+TGG | - | chr7_2:11778901-11778920 | None:intergenic | 25.0% |
| GATTTACTTATGATTCTCTC+TGG | + | chr7_2:11774132-11774151 | Msa1049030:intron | 30.0% | |
| !!! | TGTGTTGATTGATGAGTTTT+TGG | + | chr7_2:11774296-11774315 | Msa1049030:intron | 30.0% |
| TTCAATGTAATCACATGTGT+TGG | + | chr7_2:11774570-11774589 | Msa1049030:intron | 30.0% | |
| !! | ATTTGTTATGTAAGGGAATG+AGG | + | chr7_2:11774676-11774695 | Msa1049030:intron | 30.0% |
| ! | TTTGTTATGTAAGGGAATGA+GGG | + | chr7_2:11774677-11774696 | Msa1049030:intron | 30.0% |
| CAGATGATTTAAGAAATCTG+AGG | - | chr7_2:11774815-11774834 | None:intergenic | 30.0% | |
| CGTCAAACTAGTTATGAATA+TGG | + | chr7_2:11774926-11774945 | Msa1049030:CDS | 30.0% | |
| TCATTATTGAATCAGTGAAC+TGG | + | chr7_2:11775081-11775100 | Msa1049030:intron | 30.0% | |
| !! | GTGAATTCATTGATTTGTGT+TGG | + | chr7_2:11775269-11775288 | Msa1049030:intron | 30.0% |
| ! | TCTTCCTGGAAATTTTTATG+TGG | + | chr7_2:11775443-11775462 | Msa1049030:intron | 30.0% |
| ! | CATACTTTGTAATTTTGTCG+GGG | + | chr7_2:11775524-11775543 | Msa1049030:intron | 30.0% |
| ! | TTAGTGTTGGGAAGATTAAT+TGG | + | chr7_2:11775756-11775775 | Msa1049030:intron | 30.0% |
| TAGATACTGTAGAATTCTGA+TGG | + | chr7_2:11775800-11775819 | Msa1049030:intron | 30.0% | |
| !!! | AACCAGAAAGAAGTGTTTTT+AGG | - | chr7_2:11776111-11776130 | None:intergenic | 30.0% |
| !! | ATTTTGCATCATATTTTGGG+CGG | + | chr7_2:11776185-11776204 | Msa1049030:CDS | 30.0% |
| AGTATATCAATCAAGGAATC+GGG | - | chr7_2:11776242-11776261 | None:intergenic | 30.0% | |
| GAGTATATCAATCAAGGAAT+CGG | - | chr7_2:11776243-11776262 | None:intergenic | 30.0% | |
| !!! | GCATTGGTTTTGATGTTTTT+TGG | - | chr7_2:11776294-11776313 | None:intergenic | 30.0% |
| ! | GTTCCATATCTTGATTTTAG+CGG | + | chr7_2:11776991-11777010 | Msa1049030:intron | 30.0% |
| !! | TTCCATATCTTGATTTTAGC+GGG | + | chr7_2:11776992-11777011 | Msa1049030:intron | 30.0% |
| ! | GGAATTGCTATTCAAATTTG+TGG | + | chr7_2:11777412-11777431 | Msa1049030:intron | 30.0% |
| !! | GCTTTTTGTTATAGCATAGT+TGG | + | chr7_2:11777449-11777468 | Msa1049030:intron | 30.0% |
| GATCTCAACAATTTCAAACA+AGG | - | chr7_2:11777758-11777777 | None:intergenic | 30.0% | |
| CTATTAAATGGAGAGGATAT+TGG | + | chr7_2:11777900-11777919 | Msa1049030:intron | 30.0% | |
| AAAAGAAAGAAACAACCATG+TGG | + | chr7_2:11777937-11777956 | Msa1049030:intron | 30.0% | |
| AAAGAAAGAAACAACCATGT+GGG | + | chr7_2:11777938-11777957 | Msa1049030:intron | 30.0% | |
| !!! | GGGATAGTAGAATGTTTTTT+TGG | + | chr7_2:11777958-11777977 | Msa1049030:intron | 30.0% |
| ACAGAAAACACTTCACTAAT+TGG | + | chr7_2:11778050-11778069 | Msa1049030:intron | 30.0% | |
| AAACACTTCACTAATTGGAA+AGG | + | chr7_2:11778055-11778074 | Msa1049030:intron | 30.0% | |
| ! | ATGTTGACTAATCATAGCAA+TGG | - | chr7_2:11778142-11778161 | None:intergenic | 30.0% |
| ! | ATTGCTATGATTAGTCAACA+TGG | + | chr7_2:11778141-11778160 | Msa1049030:intron | 30.0% |
| ! | TTTTTCATGTATTCTGCAAC+AGG | + | chr7_2:11778433-11778452 | Msa1049030:intron | 30.0% |
| ! | TTTTCATGTATTCTGCAACA+GGG | + | chr7_2:11778434-11778453 | Msa1049030:intron | 30.0% |
| ATTGTCATAAATCTTCCACT+TGG | - | chr7_2:11778481-11778500 | None:intergenic | 30.0% | |
| GTGGAAGATTTATGACAATT+TGG | + | chr7_2:11778482-11778501 | Msa1049030:CDS | 30.0% | |
| !!! | CTTTGGAATTGAAGATTTTG+AGG | + | chr7_2:11778515-11778534 | Msa1049030:CDS | 30.0% |
| !! | TGAAGATTTTGAGGATTTGA+AGG | + | chr7_2:11778524-11778543 | Msa1049030:CDS | 30.0% |
| ATGATTGCGTAATGATGTAT+TGG | + | chr7_2:11778751-11778770 | Msa1049030:three_prime_UTR | 30.0% | |
| TGATTGCGTAATGATGTATT+GGG | + | chr7_2:11778752-11778771 | Msa1049030:three_prime_UTR | 30.0% | |
| ! | TTGGGCTTGTTTAAGAAAAA+TGG | + | chr7_2:11778770-11778789 | Msa1049030:three_prime_UTR | 30.0% |
| CACTTCAACATTACAATCAT+AGG | - | chr7_2:11778818-11778837 | None:intergenic | 30.0% | |
| ! | TGATTATGGCTTATTTGTTG+GGG | - | chr7_2:11778899-11778918 | None:intergenic | 30.0% |
| AAGCCATAATCAAAGATCTA+AGG | + | chr7_2:11778907-11778926 | Msa1049030:three_prime_UTR | 30.0% | |
| ! | TAGCCTTAGATCTTTGATTA+TGG | - | chr7_2:11778913-11778932 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGTCGTTTTGGTG+TGG | - | chr7_2:11773262-11773281 | None:intergenic | 35.0% |
| CACCAAAACGACACAAAAAA+TGG | + | chr7_2:11773262-11773281 | Msa1049030:exon | 35.0% | |
| ! | ATGAATCGTTTTGCTTGCAT+CGG | - | chr7_2:11773726-11773745 | None:intergenic | 35.0% |
| ! | GCTTGAAAGTTACTTGTTAG+TGG | + | chr7_2:11774228-11774247 | Msa1049030:intron | 35.0% |
| AGAATGCAATCACATGTATC+AGG | - | chr7_2:11774788-11774807 | None:intergenic | 35.0% | |
| TGCTGTGGTTGAATTTAATG+AGG | + | chr7_2:11775051-11775070 | Msa1049030:intron | 35.0% | |
| TATTGAATCAGTGAACTGGA+AGG | + | chr7_2:11775085-11775104 | Msa1049030:intron | 35.0% | |
| ATTGAATCAGTGAACTGGAA+GGG | + | chr7_2:11775086-11775105 | Msa1049030:intron | 35.0% | |
| ! | TGACTACTACTGATTGTTAC+AGG | + | chr7_2:11775194-11775213 | Msa1049030:CDS | 35.0% |
| ACAATTTGCACTACTCTTTG+AGG | - | chr7_2:11775360-11775379 | None:intergenic | 35.0% | |
| AGACAAGTAGGAGCTAATTA+AGG | - | chr7_2:11775426-11775445 | None:intergenic | 35.0% | |
| AAATTTCCAGGAAGACAAGT+AGG | - | chr7_2:11775438-11775457 | None:intergenic | 35.0% | |
| CTCTCCACATAAAAATTTCC+AGG | - | chr7_2:11775450-11775469 | None:intergenic | 35.0% | |
| TATATCTAATTGGTTGGGTG+TGG | + | chr7_2:11775571-11775590 | Msa1049030:intron | 35.0% | |
| !!! | ATGGTTTTGTACAAATGTGC+AGG | + | chr7_2:11775819-11775838 | Msa1049030:intron | 35.0% |
| GACCTAAAAACACTTCTTTC+TGG | + | chr7_2:11776106-11776125 | Msa1049030:intron | 35.0% | |
| !! | AAAACACTTCTTTCTGGTTC+AGG | + | chr7_2:11776112-11776131 | Msa1049030:intron | 35.0% |
| TTCTTATATTAAGGACCGGA+GGG | - | chr7_2:11776508-11776527 | None:intergenic | 35.0% | |
| ACAACAATTAATGCTGGCAT+TGG | - | chr7_2:11776310-11776329 | None:intergenic | 35.0% | |
| TTTCTTATATTAAGGACCGG+AGG | + | chr7_2:11776507-11776526 | Msa1049030:intron | 35.0% | |
| TTCTTATATTAAGGACCGGA+GGG | + | chr7_2:11776508-11776527 | Msa1049030:intron | 35.0% | |
| TAACATGTTCACACTATGTC+AGG | - | chr7_2:11776579-11776598 | None:intergenic | 35.0% | |
| ! | TTTTCATGCCTCTGATGAAT+AGG | - | chr7_2:11776617-11776636 | None:intergenic | 35.0% |
| TTCCCGCTAAAATCAAGATA+TGG | - | chr7_2:11776997-11777016 | None:intergenic | 35.0% | |
| GGTGATAAATAGCCAATAAG+CGG | + | chr7_2:11777030-11777049 | Msa1049030:intron | 35.0% | |
| TTGCCTATAATGCAGATTGA+TGG | + | chr7_2:11777491-11777510 | Msa1049030:intron | 35.0% | |
| TCTCCATCAATCTGCATTAT+AGG | - | chr7_2:11777497-11777516 | None:intergenic | 35.0% | |
| CAAATGAGGCAGCAATATAT+GGG | - | chr7_2:11777559-11777578 | None:intergenic | 35.0% | |
| TGAGTACCAGTAAGACAAAA+TGG | - | chr7_2:11777612-11777631 | None:intergenic | 35.0% | |
| TTGTCTTACTGGTACTCATT+TGG | + | chr7_2:11777614-11777633 | Msa1049030:intron | 35.0% | |
| ACATTACTTGTCATGTGCTA+TGG | + | chr7_2:11777672-11777691 | Msa1049030:intron | 35.0% | |
| TTACAGGGTCACATTCAAAT+AGG | - | chr7_2:11777699-11777718 | None:intergenic | 35.0% | |
| TTAGTCTATCTCTCTCCAAA+TGG | - | chr7_2:11777803-11777822 | None:intergenic | 35.0% | |
| TTTGGAGAGAGATAGACTAA+TGG | + | chr7_2:11777803-11777822 | Msa1049030:intron | 35.0% | |
| CTATCTATTCTCTCTCCAAA+TGG | + | chr7_2:11777871-11777890 | Msa1049030:intron | 35.0% | |
| ! | GAAGTGTCTATTAAATGGAG+AGG | + | chr7_2:11777893-11777912 | Msa1049030:intron | 35.0% |
| AATGGAGAGGATATTGGAAT+AGG | + | chr7_2:11777906-11777925 | Msa1049030:intron | 35.0% | |
| ATGGAGAGGATATTGGAATA+GGG | + | chr7_2:11777907-11777926 | Msa1049030:intron | 35.0% | |
| AAACATTCTACTATCCCACA+TGG | - | chr7_2:11777955-11777974 | None:intergenic | 35.0% | |
| TTCTTAGGAGTTCCAAACAA+GGG | - | chr7_2:11777994-11778013 | None:intergenic | 35.0% | |
| TTTCTTAGGAGTTCCAAACA+AGG | - | chr7_2:11777995-11778014 | None:intergenic | 35.0% | |
| ! | AAGTGTTTTCTGTAGTAGGA+GGG | - | chr7_2:11778043-11778062 | None:intergenic | 35.0% |
| !! | AGTGAAGTGTTTTCTGTAGT+AGG | - | chr7_2:11778047-11778066 | None:intergenic | 35.0% |
| GATAGGATGACAAAACAAAG+TGG | - | chr7_2:11778316-11778335 | None:intergenic | 35.0% | |
| AAGAAACATGAGTCGAAGAT+AGG | - | chr7_2:11778333-11778352 | None:intergenic | 35.0% | |
| ! | AATTTGGTTCGATTCAGCTT+TGG | + | chr7_2:11778498-11778517 | Msa1049030:CDS | 35.0% |
| !! | TTCTCTCTCGTTATTTTGTC+TGG | + | chr7_2:11778713-11778732 | Msa1049030:three_prime_UTR | 35.0% |
| ! | TCATCATTTGGTTGGTGTAG+AGG | + | chr7_2:11773195-11773214 | Msa1049030:five_prime_UTR | 40.0% |
| ! | TGGTGTGGTTAGGTTTTTCT+TGG | - | chr7_2:11773247-11773266 | None:intergenic | 40.0% |
| !!! | GGCCATTTTTTGTGTCGTTT+TGG | - | chr7_2:11773267-11773286 | None:intergenic | 40.0% |
| GTTGGAAATTGGGAGGAAAA+CGG | - | chr7_2:11773442-11773461 | None:intergenic | 40.0% | |
| ! | CTGAGTTGACGTTGGAAATT+GGG | - | chr7_2:11773452-11773471 | None:intergenic | 40.0% |
| AAAACGATTCATGCCGGTAT+GGG | + | chr7_2:11773734-11773753 | Msa1049030:intron | 40.0% | |
| TATTATGCAGCTGAGAGACT+TGG | + | chr7_2:11774327-11774346 | Msa1049030:intron | 40.0% | |
| ! | CAATCGACACTTTTGATCGA+AGG | - | chr7_2:11774631-11774650 | None:intergenic | 40.0% |
| !! | TAGCACCGACACTTTATTGA+GGG | + | chr7_2:11774728-11774747 | Msa1049030:intron | 40.0% |
| ACATGCCCTCAATAAAGTGT+CGG | - | chr7_2:11774736-11774755 | None:intergenic | 40.0% | |
| ! | TGAGGGCATGTTTGAAGTTT+CGG | + | chr7_2:11774745-11774764 | Msa1049030:intron | 40.0% |
| ACAATACCAACACTGACACA+TGG | - | chr7_2:11774841-11774860 | None:intergenic | 40.0% | |
| AGTTATGAATATGGGCGCTA+TGG | + | chr7_2:11774935-11774954 | Msa1049030:CDS | 40.0% | |
| !!! | CTGTTTTGGAGGAGAAGATA+AGG | + | chr7_2:11774972-11774991 | Msa1049030:CDS | 40.0% |
| TTGAATCAGTGAACTGGAAG+GGG | + | chr7_2:11775087-11775106 | Msa1049030:intron | 40.0% | |
| ! | TCAACTATCTTGATGGCATC+TGG | + | chr7_2:11775115-11775134 | Msa1049030:CDS | 40.0% |
| ! | CAACTATCTTGATGGCATCT+GGG | + | chr7_2:11775116-11775135 | Msa1049030:CDS | 40.0% |
| CTGATTGTTACAGGAAGACT+AGG | + | chr7_2:11775203-11775222 | Msa1049030:CDS | 40.0% | |
| AGAGACTGTTCTTCCAAAGA+TGG | + | chr7_2:11775234-11775253 | Msa1049030:CDS | 40.0% | |
| GAGACTGTTCTTCCAAAGAT+GGG | + | chr7_2:11775235-11775254 | Msa1049030:CDS | 40.0% | |
| AGACTGTTCTTCCAAAGATG+GGG | + | chr7_2:11775236-11775255 | Msa1049030:CDS | 40.0% | |
| TTATGTTCCCGTGTTTCCAT+AGG | + | chr7_2:11775332-11775351 | Msa1049030:intron | 40.0% | |
| ! | TTGAGGTACCTATGGAAACA+CGG | - | chr7_2:11775343-11775362 | None:intergenic | 40.0% |
| !! | ACTACTCTTTGAGGTACCTA+TGG | - | chr7_2:11775351-11775370 | None:intergenic | 40.0% |
| GTTATGCTTCCTTTCTGAAC+TGG | + | chr7_2:11775603-11775622 | Msa1049030:intron | 40.0% | |
| AGCAGAACAAGGTTAGTGTT+GGG | + | chr7_2:11775744-11775763 | Msa1049030:intron | 40.0% | |
| AACACATCTCAGGAATGGAT+TGG | - | chr7_2:11775872-11775891 | None:intergenic | 40.0% | |
| ATGTCAACACATCTCAGGAA+TGG | - | chr7_2:11775877-11775896 | None:intergenic | 40.0% | |
| GCTTAATGTCAACACATCTC+AGG | - | chr7_2:11775882-11775901 | None:intergenic | 40.0% | |
| ! | GAGATGTGTTGACATTAAGC+TGG | + | chr7_2:11775882-11775901 | Msa1049030:CDS | 40.0% |
| TCAGAACTTTGCCACAAGAA+TGG | + | chr7_2:11775907-11775926 | Msa1049030:CDS | 40.0% | |
| CAGAACTTTGCCACAAGAAT+GGG | + | chr7_2:11775908-11775927 | Msa1049030:CDS | 40.0% | |
| AGAACTTTGCCACAAGAATG+GGG | + | chr7_2:11775909-11775928 | Msa1049030:CDS | 40.0% | |
| CATAACCAAATCAGCACCAA+GGG | - | chr7_2:11775989-11776008 | None:intergenic | 40.0% | |
| CACTCTTGTACGAAGTACAT+CGG | + | chr7_2:11776009-11776028 | Msa1049030:CDS | 40.0% | |
| !! | TTCTTTCTGGTTCAGGTACT+TGG | + | chr7_2:11776119-11776138 | Msa1049030:intron | 40.0% |
| !! | TGGCTCTTTGAAGTTGATCT+CGG | + | chr7_2:11776154-11776173 | Msa1049030:CDS | 40.0% |
| GCTTGTAGTAATGACTAACC+GGG | - | chr7_2:11776220-11776239 | None:intergenic | 40.0% | |
| GGCTTGTAGTAATGACTAAC+CGG | - | chr7_2:11776221-11776240 | None:intergenic | 40.0% | |
| CTTGATTGATATACTCCCTC+CGG | + | chr7_2:11776247-11776266 | Msa1049030:intron | 40.0% | |
| CTTCTTATATTAAGGACCGG+AGG | - | chr7_2:11776266-11776285 | None:intergenic | 40.0% | |
| GTACAGCAACAGAATTCAAC+CGG | + | chr7_2:11776651-11776670 | Msa1049030:CDS | 40.0% | |
| AACAGAATTCAACCGGAATG+AGG | + | chr7_2:11776658-11776677 | Msa1049030:CDS | 40.0% | |
| CTTAAGCACATCAATCCCAA+AGG | - | chr7_2:11777120-11777139 | None:intergenic | 40.0% | |
| !! | GATGTGCTTAAGCTGTTTTG+TGG | + | chr7_2:11777128-11777147 | Msa1049030:intron | 40.0% |
| CCAAATGAGGCAGCAATATA+TGG | - | chr7_2:11777560-11777579 | None:intergenic | 40.0% | |
| CCATATATTGCTGCCTCATT+TGG | + | chr7_2:11777557-11777576 | Msa1049030:CDS | 40.0% | |
| TATATTGCTGCCTCATTTGG+TGG | + | chr7_2:11777560-11777579 | Msa1049030:CDS | 40.0% | |
| !! | AACCAGCCATTTTGTCTTAC+TGG | + | chr7_2:11777603-11777622 | Msa1049030:CDS | 40.0% |
| TACCAGTAAGACAAAATGGC+TGG | - | chr7_2:11777608-11777627 | None:intergenic | 40.0% | |
| ! | AACAAGGCGTAAAAGCACAA+AGG | - | chr7_2:11777742-11777761 | None:intergenic | 40.0% |
| TTGAGATCCTCTCCATTTGA+TGG | + | chr7_2:11777770-11777789 | Msa1049030:intron | 40.0% | |
| TGAGATCCTCTCCATTTGAT+GGG | + | chr7_2:11777771-11777790 | Msa1049030:intron | 40.0% | |
| !! | AATGGAAGTGTCCCATCAAA+TGG | - | chr7_2:11777785-11777804 | None:intergenic | 40.0% |
| TTTGATGGGACACTTCCATT+TGG | + | chr7_2:11777785-11777804 | Msa1049030:intron | 40.0% | |
| !! | GAAGTGTTTTCTGTAGTAGG+AGG | - | chr7_2:11778044-11778063 | None:intergenic | 40.0% |
| AATCATAGCAATGGCATGAG+TGG | - | chr7_2:11778133-11778152 | None:intergenic | 40.0% | |
| AGATACACGCAGCAAATACT+GGG | - | chr7_2:11778654-11778673 | None:intergenic | 40.0% | |
| AGAACACCCAAATCAGTTCA+AGG | - | chr7_2:11778690-11778709 | None:intergenic | 40.0% | |
| ! | TTGGTTGGTGTAGAGGAAGT+AGG | + | chr7_2:11773202-11773221 | Msa1049030:five_prime_UTR | 45.0% |
| !!! | TGTGTCGTTTTGGTGTGGTT+AGG | - | chr7_2:11773257-11773276 | None:intergenic | 45.0% |
| AACGCGGTGGAAACTTGAAA+CGG | - | chr7_2:11773288-11773307 | None:intergenic | 45.0% | |
| AGGTTGTTGGGAAATGACGA+CGG | - | chr7_2:11773382-11773401 | None:intergenic | 45.0% | |
| AGTTGACGTTGGAAATTGGG+AGG | - | chr7_2:11773449-11773468 | None:intergenic | 45.0% | |
| ! | GCTGAGTTGACGTTGGAAAT+TGG | - | chr7_2:11773453-11773472 | None:intergenic | 45.0% |
| TCGTGGTCTAATGAAGGAAC+TGG | + | chr7_2:11773527-11773546 | Msa1049030:CDS | 45.0% | |
| CGTGGTCTAATGAAGGAACT+GGG | + | chr7_2:11773528-11773547 | Msa1049030:CDS | 45.0% | |
| ! | ATTTTCGACGACATCGCCAT+CGG | - | chr7_2:11773657-11773676 | None:intergenic | 45.0% |
| ATGGCGATGTCGTCGAAAAT+GGG | + | chr7_2:11773657-11773676 | Msa1049030:CDS | 45.0% | |
| GCAAGCAAAACGATTCATGC+CGG | + | chr7_2:11773728-11773747 | Msa1049030:CDS | 45.0% | |
| CAAAACGATTCATGCCGGTA+TGG | + | chr7_2:11773733-11773752 | Msa1049030:intron | 45.0% | |
| TGATGGAATTACCACTCCTG+TGG | + | chr7_2:11774365-11774384 | Msa1049030:CDS | 45.0% | |
| TACTTGTAAGCCACGAAGCA+CGG | + | chr7_2:11774492-11774511 | Msa1049030:intron | 45.0% | |
| CACTGACACTTGTCAGACAT+TGG | + | chr7_2:11774600-11774619 | Msa1049030:intron | 45.0% | |
| !! | GTAGCACCGACACTTTATTG+AGG | + | chr7_2:11774727-11774746 | Msa1049030:intron | 45.0% |
| ! | CAACCCAACCAGTACTGTTT+TGG | + | chr7_2:11774958-11774977 | Msa1049030:CDS | 45.0% |
| !! | CCTCCAAAACAGTACTGGTT+GGG | - | chr7_2:11774964-11774983 | None:intergenic | 45.0% |
| !! | TCCTCCAAAACAGTACTGGT+TGG | - | chr7_2:11774965-11774984 | None:intergenic | 45.0% |
| CTTCTCCTCCAAAACAGTAC+TGG | - | chr7_2:11774969-11774988 | None:intergenic | 45.0% | |
| GGCTGAGTCAACTATCTTGA+TGG | + | chr7_2:11775108-11775127 | Msa1049030:CDS | 45.0% | |
| ! | TGCTAGCATAGTCTTGCTGA+TGG | + | chr7_2:11775144-11775163 | Msa1049030:CDS | 45.0% |
| AGTAGTCACAAGATGTCCAC+CGG | - | chr7_2:11775182-11775201 | None:intergenic | 45.0% | |
| TCTTCCAAAGATGGGGATCA+AGG | + | chr7_2:11775243-11775262 | Msa1049030:CDS | 45.0% | |
| CATACCTTGATCCCCATCTT+TGG | - | chr7_2:11775250-11775269 | None:intergenic | 45.0% | |
| ! | TGAGGTACCTATGGAAACAC+GGG | - | chr7_2:11775342-11775361 | None:intergenic | 45.0% |
| TTAGCTCCTACTTGTCTTCC+TGG | + | chr7_2:11775429-11775448 | Msa1049030:intron | 45.0% | |
| ATCTAATTGGTTGGGTGTGG+TGG | + | chr7_2:11775574-11775593 | Msa1049030:intron | 45.0% | |
| AACATCAGCAGGATCAACCA+CGG | - | chr7_2:11775702-11775721 | None:intergenic | 45.0% | |
| !! | ATCTGCTTTGGAGCAGAACA+AGG | + | chr7_2:11775733-11775752 | Msa1049030:CDS | 45.0% |
| GAGCAGAACAAGGTTAGTGT+TGG | + | chr7_2:11775743-11775762 | Msa1049030:intron | 45.0% | |
| !! | GAATGGATTGGTAGGAGACT+CGG | - | chr7_2:11775860-11775879 | None:intergenic | 45.0% |
| !! | CATCTCAGGAATGGATTGGT+AGG | - | chr7_2:11775868-11775887 | None:intergenic | 45.0% |
| GCATAACCAAATCAGCACCA+AGG | - | chr7_2:11775990-11776009 | None:intergenic | 45.0% | |
| TCTTGTACGAAGTACATCGG+TGG | + | chr7_2:11776012-11776031 | Msa1049030:CDS | 45.0% | |
| !! | TTTCTGGTTCAGGTACTTGG+TGG | + | chr7_2:11776122-11776141 | Msa1049030:intron | 45.0% |
| ! | CGGAGGGAGTATATCAATCA+AGG | - | chr7_2:11776249-11776268 | None:intergenic | 45.0% |
| CATTTGCAACATACTCCCTC+CGG | - | chr7_2:11776526-11776545 | None:intergenic | 45.0% | |
| GCTGCATACCTATTCATCAG+AGG | + | chr7_2:11776606-11776625 | Msa1049030:CDS | 45.0% | |
| GAATTCAACCGGAATGAGGA+TGG | + | chr7_2:11776662-11776681 | Msa1049030:CDS | 45.0% | |
| AAGTTTGGCCATCCTCATTC+CGG | - | chr7_2:11776673-11776692 | None:intergenic | 45.0% | |
| ! | GAGGATGGCCAAACTTTTAG+AGG | + | chr7_2:11776677-11776696 | Msa1049030:CDS | 45.0% |
| ! | GGGATGTGCCTCTAAAAGTT+TGG | - | chr7_2:11776688-11776707 | None:intergenic | 45.0% |
| !! | ACTTTTAGAGGCACATCCCA+AGG | + | chr7_2:11776689-11776708 | Msa1049030:CDS | 45.0% |
| TAGTAAAGCCATGGCACCTT+GGG | - | chr7_2:11776708-11776727 | None:intergenic | 45.0% | |
| ATAGTAAAGCCATGGCACCT+TGG | - | chr7_2:11776709-11776728 | None:intergenic | 45.0% | |
| ! | AGCGGGAAACAAAAGTGCAA+AGG | + | chr7_2:11777009-11777028 | Msa1049030:intron | 45.0% |
| GGATCACAGATACCGCTTAT+TGG | - | chr7_2:11777045-11777064 | None:intergenic | 45.0% | |
| GCGAGAGTTTCTATCCTGAA+TGG | - | chr7_2:11777066-11777085 | None:intergenic | 45.0% | |
| AGCTCATGTTCAGGATGACT+TGG | - | chr7_2:11777343-11777362 | None:intergenic | 45.0% | |
| AAAACCAGTCATCTGCCTCA+TGG | - | chr7_2:11777368-11777387 | None:intergenic | 45.0% | |
| !!! | ATGAGGCAGATGACTGGTTT+TGG | + | chr7_2:11777367-11777386 | Msa1049030:CDS | 45.0% |
| !!! | TGAGGCAGATGACTGGTTTT+GGG | + | chr7_2:11777368-11777387 | Msa1049030:CDS | 45.0% |
| AAGTGTCCCATCAAATGGAG+AGG | - | chr7_2:11777780-11777799 | None:intergenic | 45.0% | |
| AATACAGCTACAAAGGACCC+AGG | - | chr7_2:11778408-11778427 | None:intergenic | 45.0% | |
| TTTGAAGGCTGATGTCTTGC+AGG | + | chr7_2:11778539-11778558 | Msa1049030:CDS | 45.0% | |
| CAGATACACGCAGCAAATAC+TGG | - | chr7_2:11778655-11778674 | None:intergenic | 45.0% | |
| ! | GTATTTGCTGCGTGTATCTG+CGG | + | chr7_2:11778655-11778674 | Msa1049030:three_prime_UTR | 45.0% |
| !! | AATAATTCAAATAAAAAAAA+AGG | - | chr7_2:11777183-11777202 | None:intergenic | 5.0% |
| !! | TTATTGTTTAAAAAAAAAAT+TGG | - | chr7_2:11778862-11778881 | None:intergenic | 5.0% |
| GGTGTAGAGGAAGTAGGTGT+AGG | + | chr7_2:11773208-11773227 | Msa1049030:five_prime_UTR | 50.0% | |
| ATTCGAAGGTGAAAACGCGG+TGG | - | chr7_2:11773301-11773320 | None:intergenic | 50.0% | |
| GGCATTCGAAGGTGAAAACG+CGG | - | chr7_2:11773304-11773323 | None:intergenic | 50.0% | |
| AGGTGAAATCGGGATCGGAA+CGG | - | chr7_2:11773325-11773344 | None:intergenic | 50.0% | |
| AAGGGAGGTGAAATCGGGAT+CGG | - | chr7_2:11773330-11773349 | None:intergenic | 50.0% | |
| GATGGAAGGGAGGTGAAATC+GGG | - | chr7_2:11773335-11773354 | None:intergenic | 50.0% | |
| GGATGGAAGGGAGGTGAAAT+CGG | - | chr7_2:11773336-11773355 | None:intergenic | 50.0% | |
| GTTGTTGTCGGTGGATGGAA+GGG | - | chr7_2:11773348-11773367 | None:intergenic | 50.0% | |
| TTGTTGGGAAATGACGACGG+CGG | - | chr7_2:11773379-11773398 | None:intergenic | 50.0% | |
| TGGGAGGAAAACGGAGGATT+GGG | - | chr7_2:11773433-11773452 | None:intergenic | 50.0% | |
| TTGGGAGGAAAACGGAGGAT+TGG | - | chr7_2:11773434-11773453 | None:intergenic | 50.0% | |
| GGAAATTGGGAGGAAAACGG+AGG | - | chr7_2:11773439-11773458 | None:intergenic | 50.0% | |
| !! | CTTTGGTGCTGAGTTGACGT+TGG | - | chr7_2:11773460-11773479 | None:intergenic | 50.0% |
| CGTCGTAACTGCAGCAACAT+CGG | + | chr7_2:11773482-11773501 | Msa1049030:CDS | 50.0% | |
| GCTGCTTCGTGGTCTAATGA+AGG | + | chr7_2:11773521-11773540 | Msa1049030:CDS | 50.0% | |
| TCAACAGCAGATGCAACAGC+CGG | - | chr7_2:11773590-11773609 | None:intergenic | 50.0% | |
| TGTTGATGCAACAACTGCGC+CGG | + | chr7_2:11773604-11773623 | Msa1049030:CDS | 50.0% | |
| GATGGCGATGTCGTCGAAAA+TGG | + | chr7_2:11773656-11773675 | Msa1049030:CDS | 50.0% | |
| TGGCGATGTCGTCGAAAATG+GGG | + | chr7_2:11773658-11773677 | Msa1049030:CDS | 50.0% | |
| ! | ATGCAGCTGAGAGACTTGGT+AGG | + | chr7_2:11774331-11774350 | Msa1049030:intron | 50.0% |
| ! | TGCAGCTGAGAGACTTGGTA+GGG | + | chr7_2:11774332-11774351 | Msa1049030:intron | 50.0% |
| GGTAGGGCTATTGTGACTGA+TGG | + | chr7_2:11774348-11774367 | Msa1049030:CDS | 50.0% | |
| !! | AGAAGTGTTCACCACAGGAG+TGG | - | chr7_2:11774379-11774398 | None:intergenic | 50.0% |
| !! | TAGGCAGAAGTGTTCACCAC+AGG | - | chr7_2:11774384-11774403 | None:intergenic | 50.0% |
| CTGTGTCCATGTGTCAGTGT+TGG | + | chr7_2:11774832-11774851 | Msa1049030:intron | 50.0% | |
| !! | CCCAACCAGTACTGTTTTGG+AGG | + | chr7_2:11774961-11774980 | Msa1049030:CDS | 50.0% |
| CTGCAAGTGCCAGTTCAGAA+AGG | - | chr7_2:11775615-11775634 | None:intergenic | 50.0% | |
| CCACGGATGTCTGCTCAATA+AGG | - | chr7_2:11775685-11775704 | None:intergenic | 50.0% | |
| CCTTATTGAGCAGACATCCG+TGG | + | chr7_2:11775682-11775701 | Msa1049030:intron | 50.0% | |
| GTGGTTGATCCTGCTGATGT+TGG | + | chr7_2:11775701-11775720 | Msa1049030:CDS | 50.0% | |
| TGGAGCCTTGCAATCTGCTT+TGG | + | chr7_2:11775721-11775740 | Msa1049030:CDS | 50.0% | |
| CTGCTCCAAAGCAGATTGCA+AGG | - | chr7_2:11775729-11775748 | None:intergenic | 50.0% | |
| TGCTACGCCTTTGAACCAGA+AGG | + | chr7_2:11775957-11775976 | Msa1049030:CDS | 50.0% | |
| CAAATCAGCACCAAGGGCAA+GGG | - | chr7_2:11775983-11776002 | None:intergenic | 50.0% | |
| ! | GTACTTGGTGGTTGCATCAG+TGG | + | chr7_2:11776134-11776153 | Msa1049030:CDS | 50.0% |
| GCGGTATCTGTGATCCATTC+AGG | + | chr7_2:11777049-11777068 | Msa1049030:intron | 50.0% | |
| GTGAAGCGTGTCTACTATCC+AGG | + | chr7_2:11777313-11777332 | Msa1049030:CDS | 50.0% | |
| CTCATGGCAAGCTCATGTTC+AGG | - | chr7_2:11777352-11777371 | None:intergenic | 50.0% | |
| CTGAACATGAGCTTGCCATG+AGG | + | chr7_2:11777350-11777369 | Msa1049030:CDS | 50.0% | |
| !!! | GAGGCAGATGACTGGTTTTG+GGG | + | chr7_2:11777369-11777388 | Msa1049030:CDS | 50.0% |
| !!! | AGGCAGATGACTGGTTTTGG+GGG | + | chr7_2:11777370-11777389 | Msa1049030:CDS | 50.0% |
| !!! | GGTGTGGTCAGTTTTGAGGT+GGG | + | chr7_2:11777391-11777410 | Msa1049030:intron | 50.0% |
| GGGAATTGGGTTCCCTTGTT+TGG | + | chr7_2:11777979-11777998 | Msa1049030:intron | 50.0% | |
| GGACCTTCCTGCATCAGAAA+GGG | + | chr7_2:11778455-11778474 | Msa1049030:CDS | 50.0% | |
| GGTTGTTGTCGGTGGATGGA+AGG | - | chr7_2:11773349-11773368 | None:intergenic | 55.0% | |
| TGGTGGTTGTTGTCGGTGGA+TGG | - | chr7_2:11773353-11773372 | None:intergenic | 55.0% | |
| GTTGTGGTGGTTGTTGTCGG+TGG | - | chr7_2:11773357-11773376 | None:intergenic | 55.0% | |
| GCGGTTGTGGTGGTTGTTGT+CGG | - | chr7_2:11773360-11773379 | None:intergenic | 55.0% | |
| AGGAAAACGGAGGATTGGGG+AGG | - | chr7_2:11773429-11773448 | None:intergenic | 55.0% | |
| GGGAGGAAAACGGAGGATTG+GGG | - | chr7_2:11773432-11773451 | None:intergenic | 55.0% | |
| CACAAATCGTCGCTGCTTCG+TGG | + | chr7_2:11773510-11773529 | Msa1049030:CDS | 55.0% | |
| ! | ACATCGGCGTCGAGGTCTAA+CGG | - | chr7_2:11773632-11773651 | None:intergenic | 55.0% |
| TAAGCCACGAAGCACGGACA+CGG | + | chr7_2:11774498-11774517 | Msa1049030:intron | 55.0% | |
| TATACCGTGTCCGTGCTTCG+TGG | - | chr7_2:11774505-11774524 | None:intergenic | 55.0% | |
| ! | CATAGTCTTGCTGATGGCGC+TGG | + | chr7_2:11775150-11775169 | Msa1049030:CDS | 55.0% |
| TGCAAGGCTCCAACATCAGC+AGG | - | chr7_2:11775713-11775732 | None:intergenic | 55.0% | |
| CGAGCAAAGCCCCATTCTTG+TGG | - | chr7_2:11775921-11775940 | None:intergenic | 55.0% | |
| GGGGCTTTGCTCGTCATTGA+TGG | + | chr7_2:11775928-11775947 | Msa1049030:CDS | 55.0% | |
| !! | GCAAGGGCCTTCTGGTTCAA+AGG | - | chr7_2:11775967-11775986 | None:intergenic | 55.0% |
| CCAAATCAGCACCAAGGGCA+AGG | - | chr7_2:11775984-11776003 | None:intergenic | 55.0% | |
| !! | CCTTGCCCTTGGTGCTGATT+TGG | + | chr7_2:11775981-11776000 | Msa1049030:CDS | 55.0% |
| TTTGGGCGGTGCTCTTAACC+CGG | + | chr7_2:11776199-11776218 | Msa1049030:CDS | 55.0% | |
| ! | TCAGGATGACTTGGCAAGCC+TGG | - | chr7_2:11777334-11777353 | None:intergenic | 55.0% |
| CTTGCCATGAGGCAGATGAC+TGG | + | chr7_2:11777361-11777380 | Msa1049030:CDS | 55.0% | |
| !!! | GATGACTGGTTTTGGGGGTG+TGG | + | chr7_2:11777375-11777394 | Msa1049030:CDS | 55.0% |
| !! | TGGGGGTGTGGTCAGTTTTG+AGG | + | chr7_2:11777387-11777406 | Msa1049030:CDS | 55.0% |
| !!! | GGGTGTGGTCAGTTTTGAGG+TGG | + | chr7_2:11777390-11777409 | Msa1049030:intron | 55.0% |
| GCTCTCACAGCCACCAAATG+AGG | - | chr7_2:11777573-11777592 | None:intergenic | 55.0% | |
| !! | TGGTGGCTGTGAGAGCATTG+TGG | + | chr7_2:11777577-11777596 | Msa1049030:CDS | 55.0% |
| GGGACCTTCCTGCATCAGAA+AGG | + | chr7_2:11778454-11778473 | Msa1049030:intron | 55.0% | |
| TGGCCCTTTCTGATGCAGGA+AGG | - | chr7_2:11778461-11778480 | None:intergenic | 55.0% | |
| CACTTGGCCCTTTCTGATGC+AGG | - | chr7_2:11778465-11778484 | None:intergenic | 55.0% | |
| CTGCATCAGAAAGGGCCAAG+TGG | + | chr7_2:11778463-11778482 | Msa1049030:CDS | 55.0% | |
| !! | GCAGGCACTGGAAGCCATAT+AGG | + | chr7_2:11778557-11778576 | Msa1049030:CDS | 55.0% |
| GGGATCGGAACGGCATTCGA+AGG | - | chr7_2:11773315-11773334 | None:intergenic | 60.0% | |
| GTTGTCGGTGGATGGAAGGG+AGG | - | chr7_2:11773345-11773364 | None:intergenic | 60.0% | |
| AATGACGACGGCGGTTGTGG+TGG | - | chr7_2:11773370-11773389 | None:intergenic | 60.0% | |
| GGAAATGACGACGGCGGTTG+TGG | - | chr7_2:11773373-11773392 | None:intergenic | 60.0% | |
| CGGAGGAGAGGGAGGTTGTT+GGG | - | chr7_2:11773394-11773413 | None:intergenic | 60.0% | |
| GAGGATTGGGGAGGAGATGG+CGG | - | chr7_2:11773420-11773439 | None:intergenic | 60.0% | |
| ACGGAGGATTGGGGAGGAGA+TGG | - | chr7_2:11773423-11773442 | None:intergenic | 60.0% | |
| GCTGCAGTTACGACGCGCTT+TGG | - | chr7_2:11773477-11773496 | None:intergenic | 60.0% | |
| GAAGGAACTGGGAACCCCAG+CGG | + | chr7_2:11773539-11773558 | Msa1049030:CDS | 60.0% | |
| AGCAGATGCAACAGCCGGCA+CGG | - | chr7_2:11773585-11773604 | None:intergenic | 60.0% | |
| GACATCGCCATCGGCGACAT+CGG | - | chr7_2:11773648-11773667 | None:intergenic | 60.0% | |
| GTCACAAGATGTCCACCGGC+TGG | - | chr7_2:11775178-11775197 | None:intergenic | 60.0% | |
| AACCAGAAGGCCCTTGCCCT+TGG | + | chr7_2:11775970-11775989 | Msa1049030:CDS | 60.0% | |
| ! | AGGCACATCCCAAGGTGCCA+TGG | + | chr7_2:11776697-11776716 | Msa1049030:intron | 60.0% |
| GGCTGATGTCTTGCAGGCAC+TGG | + | chr7_2:11778545-11778564 | Msa1049030:CDS | 60.0% | |
| GCGGAGGAGAGGGAGGTTGT+TGG | - | chr7_2:11773395-11773414 | None:intergenic | 65.0% | |
| ! | GATTGGGGAGGAGATGGCGG+CGG | - | chr7_2:11773417-11773436 | None:intergenic | 65.0% |
| GCAGATGCAACAGCCGGCAC+GGG | - | chr7_2:11773584-11773603 | None:intergenic | 65.0% | |
| GCGTCGAGGTCTAACGGCAC+CGG | - | chr7_2:11773626-11773645 | None:intergenic | 65.0% | |
| !! | CTGATGGCGCTGGTTCCAGC+CGG | + | chr7_2:11775160-11775179 | Msa1049030:CDS | 65.0% |
| CACCAAGGGCAAGGGCCTTC+TGG | - | chr7_2:11775975-11775994 | None:intergenic | 65.0% | |
| !! | GGAACCCCAGCGGTGTCGCT+GGG | + | chr7_2:11773549-11773568 | Msa1049030:CDS | 70.0% |
| !! | GAACCCCAGCGGTGTCGCTG+GGG | + | chr7_2:11773550-11773569 | Msa1049030:CDS | 70.0% |
| GAACCCCAGCGACACCGCTG+GGG | - | chr7_2:11773556-11773575 | None:intergenic | 70.0% | |
| GGAACCCCAGCGACACCGCT+GGG | - | chr7_2:11773557-11773576 | None:intergenic | 70.0% | |
| TGGGGTTCCGACTCCCGTGC+CGG | + | chr7_2:11773568-11773587 | Msa1049030:CDS | 70.0% | |
| GCAACAGCCGGCACGGGAGT+CGG | - | chr7_2:11773578-11773597 | None:intergenic | 70.0% | |
| CATCGGCGACATCGGCGTCG+AGG | - | chr7_2:11773640-11773659 | None:intergenic | 70.0% | |
| CTCGACGCCGATGTCGCCGA+TGG | + | chr7_2:11773638-11773657 | Msa1049030:CDS | 70.0% | |
| !! | ATGGCGCTGGTTCCAGCCGG+TGG | + | chr7_2:11775163-11775182 | Msa1049030:CDS | 70.0% |
| ! | GATGGCGGCGGCGGAGGAGA+GGG | - | chr7_2:11773405-11773424 | None:intergenic | 75.0% |
| ! | AGATGGCGGCGGCGGAGGAG+AGG | - | chr7_2:11773406-11773425 | None:intergenic | 75.0% |
| ! | TGGGGAGGAGATGGCGGCGG+CGG | - | chr7_2:11773414-11773433 | None:intergenic | 75.0% |
| !! | GGGAACCCCAGCGGTGTCGC+TGG | + | chr7_2:11773548-11773567 | Msa1049030:CDS | 75.0% |
| CGGAACCCCAGCGACACCGC+TGG | - | chr7_2:11773558-11773577 | None:intergenic | 75.0% | |
| !! | GGAGGAGATGGCGGCGGCGG+AGG | - | chr7_2:11773411-11773430 | None:intergenic | 80.0% |
| ! | GGCGGCGGCGGAGGAGAGGG+AGG | - | chr7_2:11773402-11773421 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 11773188 | 11778976 | 11773188 | ID=Msa1049030;Name=Msa1049030 |
| chr7_2 | mRNA | 11773188 | 11778976 | 11773188 | ID=Msa1049030-mRNA-1;Parent=Msa1049030;Name=Msa1049030-mRNA-1;_AED=0.05;_eAED=0.05;_QI=93|1|1|1|1|1|11|398|537 |
| chr7_2 | exon | 11773188 | 11773749 | 11773188 | ID=Msa1049030-mRNA-1:exon:2951;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11774337 | 11774440 | 11774337 | ID=Msa1049030-mRNA-1:exon:2952;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11774920 | 11774993 | 11774920 | ID=Msa1049030-mRNA-1:exon:2953;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11775096 | 11775264 | 11775096 | ID=Msa1049030-mRNA-1:exon:2954;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11775695 | 11775754 | 11775695 | ID=Msa1049030-mRNA-1:exon:2955;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11775841 | 11776044 | 11775841 | ID=Msa1049030-mRNA-1:exon:2956;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11776134 | 11776220 | 11776134 | ID=Msa1049030-mRNA-1:exon:2957;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11776603 | 11776710 | 11776603 | ID=Msa1049030-mRNA-1:exon:2958;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11777313 | 11777408 | 11777313 | ID=Msa1049030-mRNA-1:exon:2959;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11777506 | 11777624 | 11777506 | ID=Msa1049030-mRNA-1:exon:2960;Parent=Msa1049030-mRNA-1 |
| chr7_2 | exon | 11778455 | 11778976 | 11778455 | ID=Msa1049030-mRNA-1:exon:2961;Parent=Msa1049030-mRNA-1 |
| chr7_2 | five_prime_UTR | 11773188 | 11773280 | 11773188 | ID=Msa1049030-mRNA-1:five_prime_utr;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11773281 | 11773749 | 11773281 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11774337 | 11774440 | 11774337 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11774920 | 11774993 | 11774920 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11775096 | 11775264 | 11775096 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11775695 | 11775754 | 11775695 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11775841 | 11776044 | 11775841 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11776134 | 11776220 | 11776134 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11776603 | 11776710 | 11776603 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11777313 | 11777408 | 11777313 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11777506 | 11777624 | 11777506 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | CDS | 11778455 | 11778578 | 11778455 | ID=Msa1049030-mRNA-1:cds;Parent=Msa1049030-mRNA-1 |
| chr7_2 | three_prime_UTR | 11778579 | 11778976 | 11778579 | ID=Msa1049030-mRNA-1:three_prime_utr;Parent=Msa1049030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
