AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1136310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1136310 MtrunA17_Chr7g0217881 93.333 465 31 0 1 465 1 465 0.0 877
Msa1136310 MtrunA17_Chr6g0453951 74.380 484 105 2 1 465 47 530 0.0 759
Msa1136310 MtrunA17_Chr6g0454401 75.620 484 99 2 1 465 1 484 0.0 751
Msa1136310 MtrunA17_Chr6g0454191 71.753 485 118 2 1 466 1 485 0.0 724
Msa1136310 MtrunA17_Chr6g0454361 74.370 476 104 1 8 465 9 484 0.0 722
Msa1136310 MtrunA17_Chr6g0454351 71.546 485 101 3 1 465 1 468 0.0 714
Msa1136310 MtrunA17_Chr6g0453961 70.455 484 124 1 1 465 10 493 0.0 710
Msa1136310 MtrunA17_Chr6g0454181 69.008 484 132 1 1 466 1 484 0.0 706
Msa1136310 MtrunA17_Chr6g0454331 69.647 481 126 2 6 466 3 483 0.0 702
Msa1136310 MtrunA17_Chr6g0452771 72.257 483 116 1 1 465 1 483 0.0 698
Msa1136310 MtrunA17_Chr6g0454261 69.835 484 128 1 1 466 1 484 0.0 696
Msa1136310 MtrunA17_Chr6g0454211 69.979 483 127 1 2 466 289 771 0.0 690
Msa1136310 MtrunA17_Chr6g0454211 49.570 349 76 4 131 461 1 267 2.62e-97 309
Msa1136310 MtrunA17_Chr6g0454141 69.215 484 131 1 1 466 1 484 0.0 688
Msa1136310 MtrunA17_Chr8g0359821 69.421 484 128 2 1 466 1 482 0.0 686
Msa1136310 MtrunA17_Chr6g0454301 69.358 483 126 3 1 464 254 733 0.0 683
Msa1136310 MtrunA17_Chr6g0454301 76.754 228 53 0 233 460 1 228 1.62e-123 376
Msa1136310 MtrunA17_Chr3g0078841 68.247 485 132 3 1 466 1 482 0.0 682
Msa1136310 MtrunA17_Chr6g0454291 70.440 477 123 1 6 464 3 479 0.0 682
Msa1136310 MtrunA17_Chr6g0454201 71.908 477 116 1 8 466 9 485 0.0 679
Msa1136310 MtrunA17_Chr8g0336331 68.041 485 132 4 1 466 1 481 0.0 677
Msa1136310 MtrunA17_Chr6g0454341 67.629 485 135 3 1 466 1 482 0.0 675
Msa1136310 MtrunA17_Chr6g0454121 69.628 484 128 2 1 466 1 483 0.0 669
Msa1136310 MtrunA17_Chr6g0454321 67.368 475 133 3 1 456 1 472 0.0 659
Msa1136310 MtrunA17_Chr6g0454321 68.800 125 39 0 2 126 496 620 1.40e-50 182
Msa1136310 MtrunA17_Chr5g0423981 68.817 465 128 3 1 465 1 448 0.0 658
Msa1136310 MtrunA17_Chr6g0454151 67.702 483 134 3 1 464 1 480 0.0 646
Msa1136310 MtrunA17_Chr6g0454131 67.288 483 139 2 1 465 1 482 0.0 645
Msa1136310 MtrunA17_Chr6g0454251 65.649 393 117 1 6 380 3 395 0.0 542
Msa1136310 MtrunA17_Chr3g0092641 52.941 476 196 7 9 463 11 479 1.58e-175 501
Msa1136310 MtrunA17_Chr5g0426431 52.941 476 196 7 10 464 12 480 3.60e-172 492
Msa1136310 MtrunA17_Chr2g0278711 50.415 482 209 6 7 466 8 481 2.08e-166 478
Msa1136310 MtrunA17_Chr6g0454271 71.134 291 84 0 176 466 1 291 1.39e-158 450
Msa1136310 MtrunA17_Chr8g0355011 57.828 396 100 6 92 466 17 366 1.42e-154 443
Msa1136310 MtrunA17_Chr3g0118711 45.511 479 235 5 5 462 8 481 1.25e-153 445
Msa1136310 MtrunA17_Chr3g0118771 45.188 478 236 5 6 462 17 489 5.76e-152 441
Msa1136310 MtrunA17_Chr3g0118691 44.606 482 241 5 5 465 10 486 7.37e-152 441
Msa1136310 MtrunA17_Chr3g0118671 44.676 479 239 5 5 462 1 474 2.06e-151 439
Msa1136310 MtrunA17_Chr3g0118701 43.633 479 244 5 5 462 10 483 3.19e-149 434
Msa1136310 MtrunA17_Chr4g0050341 46.570 481 231 5 8 465 17 494 3.28e-147 429
Msa1136310 MtrunA17_Chr6g0454171 62.242 339 98 3 131 465 1 313 5.77e-147 422
Msa1136310 MtrunA17_Chr6g0454221 82.096 229 40 1 233 460 1 229 1.29e-136 395
Msa1136310 MtrunA17_Chr3g0118751 42.887 478 220 7 5 462 1 445 4.95e-136 399
Msa1136310 MtrunA17_Chr3g0118661 42.977 477 245 6 6 461 9 479 1.68e-130 386
Msa1136310 MtrunA17_Chr6g0453981 72.294 231 46 1 131 343 1 231 1.09e-113 334
Msa1136310 MtrunA17_Chr5g0426401 52.564 312 140 5 155 463 6 312 5.09e-109 325
Msa1136310 MtrunA17_Chr6g0454371 81.609 174 32 0 292 465 1 174 2.68e-103 305
Msa1136310 MtrunA17_Chr6g0454231 63.922 255 53 3 209 462 3 219 2.98e-102 313
Msa1136310 MtrunA17_Chr6g0454231 59.167 240 77 2 1 222 241 477 2.08e-88 278
Msa1136310 MtrunA17_Chr3g0118721 49.147 293 146 2 176 465 1 293 7.95e-102 306
Msa1136310 MtrunA17_Chr3g0112771 37.395 476 258 9 5 466 7 456 2.59e-101 310
Msa1136310 MtrunA17_Chr6g0453941 68.919 222 50 2 132 334 54 275 1.12e-100 302
Msa1136310 MtrunA17_Chr6g0453941 69.841 63 14 2 1 62 1 59 4.96e-19 87.0
Msa1136310 MtrunA17_Chr5g0412111 36.632 475 262 10 9 461 4 461 1.13e-96 299
Msa1136310 MtrunA17_Chr8g0336271 57.258 248 84 3 1 230 1 244 2.89e-93 283
Msa1136310 MtrunA17_Chr5g0412131 36.117 479 260 9 9 461 11 469 1.91e-92 288
Msa1136310 MtrunA17_Chr5g0412101 36.059 477 264 11 9 461 11 470 7.92e-89 279
Msa1136310 MtrunA17_Chr6g0454281 69.540 174 53 0 1 174 1 174 3.25e-85 260
Msa1136310 MtrunA17_Chr3g0112761 33.476 466 270 10 12 462 10 450 2.52e-80 256
Msa1136310 MtrunA17_Chr4g0032331 33.619 467 268 12 12 462 10 450 7.73e-79 252
Msa1136310 MtrunA17_Chr1g0207981 31.799 478 286 12 10 463 13 474 5.40e-78 251
Msa1136310 MtrunA17_Chr8g0336261 78.102 137 30 0 292 428 1 137 6.38e-78 239
Msa1136310 MtrunA17_Chr3g0098111 31.501 473 291 11 10 461 9 469 9.91e-73 237
Msa1136310 MtrunA17_Chr7g0218831 31.317 463 274 11 9 458 5 436 9.65e-72 233
Msa1136310 MtrunA17_Chr6g0464881 30.189 477 295 11 4 465 5 458 1.24e-71 234
Msa1136310 MtrunA17_Chr4g0053501 28.903 474 301 10 12 466 13 469 5.53e-69 228
Msa1136310 MtrunA17_Chr5g0414331 31.250 464 286 12 6 458 9 450 1.54e-68 226
Msa1136310 MtrunA17_Chr7g0218841 32.543 464 268 13 9 458 5 437 2.15e-68 224
Msa1136310 MtrunA17_Chr8g0365811 31.381 478 283 13 12 461 497 957 2.19e-68 235
Msa1136310 MtrunA17_Chr8g0365811 32.018 456 261 16 12 435 11 449 3.38e-62 218
Msa1136310 MtrunA17_Chr7g0218791 32.334 467 270 15 9 458 4 441 5.27e-68 224
Msa1136310 MtrunA17_Chr4g0053321 29.857 489 295 14 4 466 18 484 5.90e-68 225
Msa1136310 MtrunA17_Chr7g0218811 31.317 463 275 11 9 458 14 446 7.36e-68 223
Msa1136310 MtrunA17_Chr7g0249981 31.749 463 282 12 4 454 19 459 1.93e-67 223
Msa1136310 MtrunA17_Chr1g0207931 30.407 467 249 10 10 461 92 497 2.87e-67 223
Msa1136310 MtrunA17_Chr1g0207971 30.213 470 286 11 10 461 8 453 3.57e-67 222
Msa1136310 MtrunA17_Chr7g0250001 29.487 468 294 9 8 462 4 448 4.32e-67 222
Msa1136310 MtrunA17_Chr5g0414321 31.501 473 281 13 6 462 7 452 4.59e-67 222
Msa1136310 MtrunA17_Chr8g0380531 31.897 464 288 10 10 461 10 457 6.55e-67 221
Msa1136310 MtrunA17_Chr1g0161351 30.947 475 291 11 10 461 37 497 3.39e-66 221
Msa1136310 MtrunA17_Chr1g0207861 32.278 474 286 12 10 461 8 468 7.20e-66 219
Msa1136310 MtrunA17_Chr1g0207831 31.172 478 277 12 12 461 10 463 9.72e-66 219
Msa1136310 MtrunA17_Chr6g0464921 30.508 472 287 13 9 463 10 457 1.43e-65 218
Msa1136310 MtrunA17_Chr1g0207951 31.799 478 284 12 6 461 651 1108 6.37e-64 223
Msa1136310 MtrunA17_Chr1g0207951 31.013 474 287 12 6 461 119 570 1.17e-63 223
Msa1136310 MtrunA17_Chr7g0218821 29.978 447 264 10 9 430 4 426 7.02e-64 213
Msa1136310 MtrunA17_Chr5g0431441 31.524 479 272 14 10 462 18 466 1.88e-63 213
Msa1136310 MtrunA17_Chr6g0464871 30.258 466 291 13 6 458 19 463 3.74e-62 209
Msa1136310 MtrunA17_Chr6g0464861 30.128 468 288 13 6 458 7 450 6.32e-62 208
Msa1136310 MtrunA17_Chr6g0454111 66.429 140 47 0 173 312 44 183 1.78e-61 198
Msa1136310 MtrunA17_Chr6g0464841 29.915 468 290 14 6 458 7 451 4.20e-61 206
Msa1136310 MtrunA17_Chr7g0243631 29.918 488 292 14 10 461 13 486 4.93e-61 207
Msa1136310 MtrunA17_Chr4g0011051 31.548 504 288 16 5 466 4 492 1.48e-60 206
Msa1136310 MtrunA17_Chr7g0275681 30.612 490 293 14 5 462 7 481 1.01e-59 203
Msa1136310 MtrunA17_Chr7g0243931 30.303 495 289 14 6 461 13 490 1.65e-59 203
Msa1136310 MtrunA17_Chr8g0377921 30.561 481 289 18 9 462 2 464 6.36e-59 200
Msa1136310 MtrunA17_Chr7g0243951 29.532 491 297 16 6 461 7 483 7.41e-59 201
Msa1136310 MtrunA17_Chr5g0401721 29.193 483 299 15 11 466 9 475 5.53e-58 198
Msa1136310 MtrunA17_Chr7g0265041 29.175 497 300 14 9 466 10 493 2.08e-57 197
Msa1136310 MtrunA17_Chr4g0044511 29.400 483 300 12 6 461 36 504 6.20e-57 196
Msa1136310 MtrunA17_Chr7g0265151 28.866 485 304 13 10 462 9 484 8.46e-57 195
Msa1136310 MtrunA17_Chr7g0249931 28.632 468 292 13 4 454 34 476 2.92e-56 194
Msa1136310 MtrunA17_Chr5g0419761 29.058 499 293 17 7 462 6 486 6.18e-56 193
Msa1136310 MtrunA17_Chr7g0243681 28.980 490 289 16 10 461 11 479 8.70e-56 193
Msa1136310 MtrunA17_Chr3g0121991 30.285 492 278 18 10 461 79 545 2.78e-55 192
Msa1136310 MtrunA17_Chr5g0426411 55.030 169 70 3 8 175 10 173 3.82e-55 181
Msa1136310 MtrunA17_Chr5g0393591 29.424 469 264 11 10 461 17 435 7.06e-55 189
Msa1136310 MtrunA17_Chr3g0122001 30.063 479 296 11 10 461 486 952 9.97e-55 196
Msa1136310 MtrunA17_Chr3g0122001 30.165 484 290 13 10 461 6 473 2.22e-53 192
Msa1136310 MtrunA17_Chr7g0265101 29.026 503 294 16 8 466 7 490 1.77e-54 189
Msa1136310 MtrunA17_Chr7g0243861 29.124 491 300 15 6 461 10 487 5.43e-54 188
Msa1136310 MtrunA17_Chr4g0060511 29.150 494 299 17 6 461 7 487 8.66e-54 187
Msa1136310 MtrunA17_Chr8g0366391 29.363 487 291 15 10 461 9 477 1.42e-53 187
Msa1136310 MtrunA17_Chr5g0431361 28.958 480 275 13 10 461 12 453 2.10e-53 186
Msa1136310 MtrunA17_Chr7g0265141 29.735 491 294 15 10 462 9 486 4.55e-52 182
Msa1136310 MtrunA17_Chr7g0243771 28.041 485 301 14 10 461 6 475 6.18e-52 182
Msa1136310 MtrunA17_Chr5g0419771 28.032 503 287 16 10 462 36 513 1.46e-51 182
Msa1136310 MtrunA17_Chr6g0454381 61.972 142 36 1 131 254 1 142 1.65e-51 171
Msa1136310 MtrunA17_Chr7g0265051 28.231 503 296 18 8 466 7 488 3.73e-51 181
Msa1136310 MtrunA17_Chr8g0377941 29.545 484 278 15 12 462 9 462 4.33e-51 180
Msa1136310 MtrunA17_Chr7g0243801 27.236 492 304 14 6 461 3 476 5.01e-51 180
Msa1136310 MtrunA17_Chr7g0232401 28.395 486 278 14 7 452 3 458 5.48e-51 179
Msa1136310 MtrunA17_Chr7g0243871 27.812 489 299 15 6 461 5 472 9.65e-51 179
Msa1136310 MtrunA17_Chr1g0179901 26.680 491 310 15 10 462 16 494 2.41e-50 178
Msa1136310 MtrunA17_Chr5g0431371 28.992 476 277 14 10 461 10 448 3.20e-50 177
Msa1136310 MtrunA17_Chr6g0462531 27.959 490 290 13 12 466 6 467 7.66e-50 176
Msa1136310 MtrunA17_Chr1g0173121 27.579 475 291 14 12 461 16 462 4.38e-49 174
Msa1136310 MtrunA17_Chr5g0431401 27.696 473 287 13 10 461 10 448 4.42e-49 174
Msa1136310 MtrunA17_Chr5g0448551 28.539 438 270 12 7 425 4 417 4.50e-49 174
Msa1136310 MtrunA17_Chr7g0235051 28.306 484 272 15 10 460 11 452 4.51e-49 174
Msa1136310 MtrunA17_Chr7g0232391 27.984 486 294 14 7 460 3 464 6.37e-49 174
Msa1136310 MtrunA17_Chr8g0335141 28.953 487 276 14 3 450 2 457 6.51e-49 174
Msa1136310 MtrunA17_Chr4g0072761 28.664 464 293 10 10 461 15 452 2.62e-48 172
Msa1136310 MtrunA17_Chr7g0243781 26.166 493 297 13 10 461 9 475 4.85e-48 172
Msa1136310 MtrunA17_Chr5g0431421 28.092 477 282 13 10 462 10 449 5.52e-48 171
Msa1136310 MtrunA17_Chr3g0106231 27.932 469 288 10 10 462 18 452 5.54e-48 171
Msa1136310 MtrunA17_Chr7g0243851 28.778 483 266 16 8 461 9 442 6.35e-48 171
Msa1136310 MtrunA17_Chr1g0159551 27.331 472 287 16 15 461 19 459 6.66e-48 171
Msa1136310 MtrunA17_Chr6g0462521 31.176 340 203 8 136 459 124 448 6.87e-48 171
Msa1136310 MtrunA17_Chr4g0072771 27.195 467 305 9 7 461 22 465 7.18e-48 171
Msa1136310 MtrunA17_Chr4g0044501 27.812 489 293 14 10 461 10 475 1.62e-47 171
Msa1136310 MtrunA17_Chr6g0462571 28.448 348 207 7 136 457 126 457 2.67e-47 170
Msa1136310 MtrunA17_Chr6g0462541 29.464 336 195 8 148 457 140 459 4.48e-47 169
Msa1136310 MtrunA17_Chr5g0401851 27.912 498 293 15 8 461 8 483 4.61e-47 169
Msa1136310 MtrunA17_Chr7g0243761 27.579 475 290 13 10 461 11 454 7.83e-47 168
Msa1136310 MtrunA17_Chr8g0373301 30.500 400 225 14 70 437 64 442 1.15e-46 168
Msa1136310 MtrunA17_Chr8g0355221 27.329 483 307 14 11 461 16 486 1.52e-46 168
Msa1136310 MtrunA17_Chr4g0066131 28.361 476 291 13 13 458 16 471 1.92e-46 167
Msa1136310 MtrunA17_Chr5g0428081 27.859 481 300 15 13 461 14 479 2.02e-46 167
Msa1136310 MtrunA17_Chr7g0232411 27.400 500 279 18 7 460 3 464 2.12e-46 167
Msa1136310 MtrunA17_Chr6g0449931 28.247 485 282 16 8 454 4 460 2.50e-46 167
Msa1136310 MtrunA17_Chr4g0014061 28.125 480 289 12 13 458 12 469 2.69e-46 167
Msa1136310 MtrunA17_Chr7g0249961 37.607 234 136 5 226 454 24 252 5.41e-46 160
Msa1136310 MtrunA17_Chr2g0294931 26.875 480 308 13 13 461 14 481 5.69e-46 166
Msa1136310 MtrunA17_Chr8g0347281 29.026 503 262 16 9 464 17 471 6.43e-46 166
Msa1136310 MtrunA17_Chr4g0066221 27.479 484 309 16 13 466 14 485 7.73e-46 166
Msa1136310 MtrunA17_Chr7g0275511 28.484 488 266 18 9 450 14 464 1.40e-45 165
Msa1136310 MtrunA17_Chr8g0336741 28.118 473 263 14 10 440 13 450 1.51e-45 165
Msa1136310 MtrunA17_Chr1g0165701 27.935 494 287 16 11 461 16 483 1.78e-45 165
Msa1136310 MtrunA17_Chr5g0440421 28.684 509 301 22 1 462 1 494 3.16e-45 164
Msa1136310 MtrunA17_Chr5g0432731 32.692 312 174 9 167 462 6 297 3.75e-45 159
Msa1136310 MtrunA17_Chr6g0462551 27.122 483 287 16 12 457 6 460 3.76e-45 164
Msa1136310 MtrunA17_Chr8g0347271 29.132 484 286 15 9 464 18 472 4.02e-45 164
Msa1136310 MtrunA17_Chr7g0232311 30.986 355 200 10 134 458 121 460 4.04e-45 163
Msa1136310 MtrunA17_Chr2g0294921 28.392 479 302 14 13 461 163 630 6.89e-45 166
Msa1136310 MtrunA17_Chr8g0374931 27.235 481 305 13 13 461 14 481 7.17e-45 163
Msa1136310 MtrunA17_Chr8g0339631 29.337 392 222 11 100 454 88 461 7.63e-45 163
Msa1136310 MtrunA17_Chr7g0218311 27.083 480 304 11 13 461 19 483 1.12e-44 163
Msa1136310 MtrunA17_Chr6g0463891 27.935 494 289 17 12 461 14 484 1.19e-44 163
Msa1136310 MtrunA17_Chr8g0382021 28.270 474 289 15 15 461 39 488 1.36e-44 162
Msa1136310 MtrunA17_Chr1g0153451 28.429 503 276 19 5 464 1 462 1.74e-44 162
Msa1136310 MtrunA17_Chr6g0463851 26.694 487 301 14 13 461 14 482 1.95e-44 162
Msa1136310 MtrunA17_Chr5g0427561 74.157 89 23 0 378 466 1 89 4.96e-44 149
Msa1136310 MtrunA17_Chr5g0420801 27.975 479 293 15 6 458 3 455 5.53e-44 160
Msa1136310 MtrunA17_Chr8g0336691 30.245 367 214 9 121 457 1021 1375 5.98e-44 166
Msa1136310 MtrunA17_Chr8g0336691 28.797 507 278 16 2 464 5 472 1.15e-43 164
Msa1136310 MtrunA17_Chr8g0336691 27.721 487 271 18 7 464 477 911 5.76e-37 145
Msa1136310 MtrunA17_Chr4g0066151 27.178 482 305 12 13 466 21 484 6.03e-44 160
Msa1136310 MtrunA17_Chr5g0410941 27.044 477 307 12 13 461 26 489 1.07e-43 160
Msa1136310 MtrunA17_Chr8g0335161 31.642 335 191 9 142 457 147 462 1.12e-43 159
Msa1136310 MtrunA17_Chr8g0370941 27.921 505 289 17 7 459 5 486 2.96e-43 159
Msa1136310 MtrunA17_Chr5g0416741 26.477 491 298 13 12 461 15 483 5.03e-43 158
Msa1136310 MtrunA17_Chr8g0369341 27.893 484 299 14 6 459 3 466 5.28e-43 158
Msa1136310 MtrunA17_Chr6g0459311 31.987 297 171 7 179 457 184 467 6.90e-43 157
Msa1136310 MtrunA17_Chr8g0336651 28.343 501 280 17 7 464 778 1242 9.93e-43 162
Msa1136310 MtrunA17_Chr8g0336651 27.824 478 268 15 5 440 1 443 7.23e-42 159
Msa1136310 MtrunA17_Chr8g0336651 33.588 262 133 6 211 464 545 773 1.14e-34 138
Msa1136310 MtrunA17_Chr5g0416821 27.801 482 292 15 12 461 16 473 1.03e-42 157
Msa1136310 MtrunA17_Chr7g0265111 27.439 492 304 15 10 462 39 516 1.21e-42 158
Msa1136310 MtrunA17_Chr4g0066261 28.138 494 284 16 13 461 14 481 4.68e-42 155
Msa1136310 MtrunA17_Chr4g0066201 29.046 482 281 15 13 461 21 474 7.61e-42 155
Msa1136310 MtrunA17_Chr8g0339461 30.532 357 196 11 121 440 109 450 1.85e-41 154
Msa1136310 MtrunA17_Chr5g0429711 28.719 484 290 17 5 461 6 461 2.02e-41 153
Msa1136310 MtrunA17_Chr8g0336731 29.581 382 226 10 107 458 119 487 2.19e-41 154
Msa1136310 MtrunA17_Chr7g0232331 27.119 472 276 16 7 440 3 444 3.55e-41 153
Msa1136310 MtrunA17_Chr4g0066281 29.184 490 276 15 13 465 15 470 4.57e-41 152
Msa1136310 MtrunA17_Chr6g0486251 30.976 297 174 7 179 457 177 460 7.38e-41 152
Msa1136310 MtrunA17_Chr6g0486201 30.976 297 174 7 179 457 177 460 7.38e-41 152
Msa1136310 MtrunA17_Chr8g0361371 26.411 496 289 15 7 458 4 467 1.01e-40 152
Msa1136310 MtrunA17_Chr7g0232341 25.813 492 287 16 7 452 3 462 1.97e-40 151
Msa1136310 MtrunA17_Chr8g0339451 28.954 411 219 13 88 440 47 442 4.35e-40 150
Msa1136310 MtrunA17_Chr2g0329111 27.579 504 283 19 7 458 3 476 7.08e-40 149
Msa1136310 MtrunA17_Chr5g0442521 24.145 497 306 16 7 458 2 472 1.71e-39 148
Msa1136310 MtrunA17_Chr5g0442561 25.349 501 300 18 7 462 2 473 4.92e-39 147
Msa1136310 MtrunA17_Chr6g0463861 26.446 484 307 14 13 466 14 478 9.14e-39 146
Msa1136310 MtrunA17_Chr8g0339601 32.281 285 154 8 182 440 38 309 9.50e-39 143
Msa1136310 MtrunA17_Chr3g0079731 28.257 499 279 16 12 459 8 478 1.62e-38 145
Msa1136310 MtrunA17_Chr8g0374901 25.361 485 305 16 13 461 15 478 2.50e-38 145
Msa1136310 MtrunA17_Chr2g0294941 29.577 355 203 12 124 442 17 360 4.18e-38 142
Msa1136310 MtrunA17_Chr8g0374971 26.087 483 306 13 13 461 15 480 4.59e-38 144
Msa1136310 MtrunA17_Chr5g0448521 25.948 501 292 14 7 462 2 468 6.73e-38 144
Msa1136310 MtrunA17_Chr5g0442491 24.206 504 304 14 7 462 2 475 1.36e-37 143
Msa1136310 MtrunA17_Chr4g0066171 28.106 491 295 16 2 461 13 476 2.50e-37 142
Msa1136310 MtrunA17_Chr5g0442541 25.904 498 294 15 7 462 2 466 5.92e-37 141
Msa1136310 MtrunA17_Chr4g0042931 27.010 485 291 16 10 460 7 462 7.44e-37 141
Msa1136310 MtrunA17_Chr5g0442601 26.969 508 287 20 7 462 401 876 1.16e-36 144
Msa1136310 MtrunA17_Chr5g0442601 25.733 307 166 7 122 399 62 335 5.83e-23 102
Msa1136310 MtrunA17_Chr5g0403641 31.104 299 163 8 196 463 218 504 1.40e-36 141
Msa1136310 MtrunA17_Chr7g0243711 34.091 264 147 9 222 461 56 316 2.17e-36 137
Msa1136310 MtrunA17_Chr8g0374941 25.558 493 306 14 13 466 952 1422 2.37e-36 143
Msa1136310 MtrunA17_Chr8g0374941 25.054 467 293 12 13 442 14 460 4.43e-34 136
Msa1136310 MtrunA17_Chr8g0374941 25.054 467 293 14 13 442 479 925 4.35e-33 133
Msa1136310 MtrunA17_Chr4g0044521 25.355 493 301 17 5 459 1 464 2.88e-36 139
Msa1136310 MtrunA17_Chr8g0339441 37.500 192 100 4 269 440 217 408 3.50e-36 138
Msa1136310 MtrunA17_Chr3g0106251 30.556 288 176 5 184 462 22 294 5.33e-36 135
Msa1136310 MtrunA17_Chr8g0334851 25.265 471 288 14 8 440 4 448 6.41e-36 138
Msa1136310 MtrunA17_Chr4g0044481 27.033 418 237 13 10 404 27 399 7.19e-36 137
Msa1136310 MtrunA17_Chr8g0350881 24.528 477 323 10 12 461 14 480 1.40e-35 137
Msa1136310 MtrunA17_Chr5g0431431 33.208 265 152 7 167 427 110 353 1.46e-35 135
Msa1136310 MtrunA17_Chr1g0153461 38.421 190 100 4 268 440 2 191 4.64e-35 130
Msa1136310 MtrunA17_Chr8g0334831 26.819 481 276 18 5 437 1 453 6.13e-35 136
Msa1136310 MtrunA17_Chr5g0442581 25.969 516 282 17 7 462 2 477 6.55e-35 136
Msa1136310 MtrunA17_Chr8g0334861 27.532 316 184 8 169 460 168 462 1.59e-34 134
Msa1136310 MtrunA17_Chr7g0243611 32.168 286 175 11 131 408 3 277 1.71e-34 130
Msa1136310 MtrunA17_Chr7g0241781 26.984 441 273 16 7 438 6 406 1.58e-33 131
Msa1136310 MtrunA17_Chr5g0429681 28.016 489 286 19 5 458 39 496 2.58e-33 131
Msa1136310 MtrunA17_Chr8g0336251 27.329 483 283 19 10 458 7 455 7.16e-33 130
Msa1136310 MtrunA17_Chr8g0336321 27.329 483 283 19 10 458 7 455 9.89e-33 129
Msa1136310 MtrunA17_Chr5g0442511 24.390 492 285 18 7 458 46 490 1.12e-32 129
Msa1136310 MtrunA17_Chr2g0302991 27.446 368 224 11 122 461 110 462 1.70e-32 129
Msa1136310 MtrunA17_Chr2g0307961 25.948 501 289 17 6 463 9 470 1.83e-32 129
Msa1136310 MtrunA17_Chr7g0241801 27.335 439 274 15 7 438 6 406 1.94e-32 128
Msa1136310 MtrunA17_Chr7g0243811 24.939 409 257 11 22 408 1 381 3.23e-32 127
Msa1136310 MtrunA17_Chr7g0243911 35.979 189 104 3 265 436 17 205 9.00e-32 121
Msa1136310 MtrunA17_Chr2g0302961 24.453 503 291 16 8 461 3 465 1.48e-30 123
Msa1136310 MtrunA17_Chr1g0207881 39.535 129 72 1 339 461 256 384 5.15e-30 120
Msa1136310 MtrunA17_Chr8g0361411 26.230 488 286 18 8 461 6 453 1.33e-29 120
Msa1136310 MtrunA17_Chr6g0482061 25.000 500 294 16 10 460 11 478 3.08e-29 119
Msa1136310 MtrunA17_Chr6g0466831 26.190 462 296 16 1 438 1 441 1.08e-28 118
Msa1136310 MtrunA17_Chr7g0231631 31.746 252 164 5 215 461 11 259 2.90e-28 113
Msa1136310 MtrunA17_Chr8g0367221 26.754 456 288 17 7 437 9 443 3.39e-28 119
Msa1136310 MtrunA17_Chr8g0367221 25.495 455 296 12 7 437 1285 1720 4.75e-27 115
Msa1136310 MtrunA17_Chr8g0367221 25.383 457 294 16 7 437 795 1230 1.94e-25 110
Msa1136310 MtrunA17_Chr2g0278721 26.237 465 290 16 6 439 513 955 3.99e-28 118
Msa1136310 MtrunA17_Chr2g0278721 32.948 173 107 4 272 438 274 443 2.50e-21 97.4
Msa1136310 MtrunA17_Chr7g0232351 26.585 410 230 16 7 379 3 378 7.79e-28 114
Msa1136310 MtrunA17_Chr5g0409591 30.451 266 144 9 206 439 205 461 1.76e-27 114
Msa1136310 MtrunA17_Chr6g0466841 24.946 465 298 17 1 438 1 441 2.02e-27 114
Msa1136310 MtrunA17_Chr7g0250021 28.349 321 208 8 4 317 6 311 2.41e-27 112
Msa1136310 MtrunA17_Chr6g0464091 24.784 464 294 14 4 438 11 448 6.54e-27 112
Msa1136310 MtrunA17_Chr4g0069611 25.216 464 281 16 6 438 10 438 7.16e-27 112
Msa1136310 MtrunA17_Chr5g0427571 32.432 259 153 8 211 458 42 289 2.02e-26 108
Msa1136310 MtrunA17_Chr6g0454391 67.692 65 21 0 354 418 11 75 4.86e-26 102
Msa1136310 MtrunA17_Chr3g0092031 33.333 177 109 4 268 438 2 175 5.06e-26 105
Msa1136310 MtrunA17_Chr2g0302851 25.376 465 278 18 6 438 12 439 5.35e-26 110
Msa1136310 MtrunA17_Chr3g0079711 30.645 186 105 4 296 459 3 186 1.39e-25 103
Msa1136310 MtrunA17_Chr2g0278741 24.508 457 297 17 6 438 93 525 7.19e-25 107
Msa1136310 MtrunA17_Chr4g0040691 24.641 487 305 15 10 466 8 462 1.49e-23 102
Msa1136310 MtrunA17_Chr8g0357361 33.824 204 120 7 207 404 57 251 4.25e-23 98.6
Msa1136310 MtrunA17_Chr8g0337381 40.310 129 67 3 340 464 2 124 2.71e-21 89.7
Msa1136310 MtrunA17_Chr3g0118741 59.322 59 24 0 5 63 1 59 7.12e-21 86.3
Msa1136310 MtrunA17_Chr4g0039881 23.543 446 282 17 20 438 2 415 8.10e-21 94.7
Msa1136310 MtrunA17_Chr1g0196851 28.400 250 152 9 203 438 240 476 1.06e-20 94.7
Msa1136310 MtrunA17_Chr4g0066141 36.486 148 77 4 331 461 204 351 2.61e-20 92.0
Msa1136310 MtrunA17_Chr4g0040711 24.675 462 281 15 10 438 8 435 7.42e-19 89.0
Msa1136310 MtrunA17_Chr4g0029151 22.270 467 295 17 4 438 14 444 1.11e-18 88.2
Msa1136310 MtrunA17_Chr4g0029131 26.087 253 154 9 203 438 200 436 1.15e-18 89.0
Msa1136310 MtrunA17_Chr6g0454241 75.610 41 10 0 421 461 1 41 2.43e-15 71.2
Msa1136310 MtrunA17_Chr2g0283041 25.000 244 156 8 207 438 205 433 1.15e-14 75.9
Msa1136310 MtrunA17_Chr8g0334841 29.193 161 97 4 183 339 11 158 5.04e-14 70.1
Msa1136310 MtrunA17_Chr2g0319761 24.670 454 291 15 10 438 8 435 6.27e-14 73.6
Msa1136310 MtrunA17_Chr2g0319751 24.078 461 283 16 10 437 485 911 6.69e-14 74.3
Msa1136310 MtrunA17_Chr7g0267931 75.676 37 8 1 15 50 25 61 8.01e-14 66.2
Msa1136310 MtrunA17_Chr7g0243731 38.889 72 44 0 333 404 2 73 9.25e-14 66.6
Msa1136310 MtrunA17_Chr7g0243721 33.333 111 73 1 206 315 25 135 7.91e-13 65.9
Msa1136310 MtrunA17_Chr3g0118731 33.333 117 73 2 62 178 28 139 8.64e-13 66.2
Msa1136310 MtrunA17_Chr2g0319791 22.517 453 300 14 10 437 8 434 1.53e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1136310 AT1G22380.1 50.625 480 211 5 7 465 10 484 1.17e-175 502
Msa1136310 AT1G22400.1 49.068 483 219 5 6 466 9 486 2.38e-172 493
Msa1136310 AT1G22340.1 49.692 487 216 7 2 464 3 484 3.79e-172 493
Msa1136310 AT1G22360.1 49.587 484 218 5 1 463 1 479 1.04e-168 484
Msa1136310 AT1G22370.2 51.374 473 209 5 7 463 10 477 2.50e-167 480
Msa1136310 AT1G22360.2 48.554 484 211 6 1 463 1 467 8.64e-161 463
Msa1136310 AT1G78270.1 46.653 478 229 6 6 462 9 481 3.54e-159 460
Msa1136310 AT1G22370.1 51.361 294 140 2 173 463 14 307 2.47e-101 306
Msa1136310 AT5G59590.1 37.259 467 251 13 7 458 7 446 5.17e-91 284
Msa1136310 AT5G59580.1 36.481 466 253 11 8 458 7 444 4.81e-88 276
Msa1136310 AT3G46660.1 37.155 471 238 13 12 458 16 452 7.90e-87 273
Msa1136310 AT3G11340.1 33.619 467 270 8 8 462 7 445 2.17e-85 269
Msa1136310 AT3G46670.1 35.622 466 254 12 10 458 9 445 3.04e-85 269
Msa1136310 AT3G46700.1 34.328 469 264 11 7 461 6 444 1.07e-82 262
Msa1136310 AT3G46650.1 34.490 461 263 12 1 456 1 427 1.95e-82 261
Msa1136310 AT3G46690.1 34.820 471 260 11 7 459 6 447 2.69e-79 254
Msa1136310 AT5G05880.1 33.333 462 271 10 10 458 8 445 4.61e-79 253
Msa1136310 AT5G05900.1 33.333 465 266 12 10 458 8 444 4.78e-79 253
Msa1136310 AT5G05890.1 33.983 462 272 9 10 458 8 449 4.92e-79 253
Msa1136310 AT5G05860.1 33.547 468 270 11 10 463 9 449 5.10e-79 253
Msa1136310 AT3G46680.1 33.684 475 262 13 5 458 4 446 2.16e-78 251
Msa1136310 AT3G46720.1 34.829 468 253 12 7 458 6 437 1.46e-76 246
Msa1136310 AT5G05870.1 34.335 466 273 10 10 461 8 454 4.84e-76 246
Msa1136310 AT5G38010.1 33.613 476 264 10 6 459 6 451 1.37e-74 241
Msa1136310 AT5G38040.1 33.700 454 263 10 19 459 19 447 5.57e-74 240
Msa1136310 AT3G55700.1 32.211 475 277 14 6 462 4 451 7.27e-74 240
Msa1136310 AT3G21560.1 29.918 488 287 11 9 464 11 475 1.23e-71 235
Msa1136310 AT2G36970.1 30.061 489 295 14 1 461 1 470 7.70e-71 233
Msa1136310 AT2G26480.1 29.560 477 284 10 7 464 5 448 3.21e-69 228
Msa1136310 AT4G15500.1 29.498 478 291 11 9 462 8 463 1.09e-68 227
Msa1136310 AT4G15490.1 29.039 489 294 12 6 464 4 469 1.78e-68 226
Msa1136310 AT4G15480.1 29.436 479 292 10 10 461 19 478 3.69e-68 226
Msa1136310 AT2G43820.1 31.635 471 286 16 6 464 3 449 9.30e-68 224
Msa1136310 AT3G02100.1 31.290 473 276 13 8 458 11 456 1.60e-67 223
Msa1136310 AT2G31750.1 30.462 476 284 13 8 462 6 455 7.76e-67 221
Msa1136310 AT2G43840.2 31.489 470 284 14 8 464 5 449 1.34e-66 221
Msa1136310 AT2G31750.2 30.462 476 284 13 8 462 6 455 1.99e-66 221
Msa1136310 AT2G43840.1 31.277 470 285 14 8 464 5 449 1.44e-65 218
Msa1136310 AT1G05680.1 31.906 467 277 13 10 460 6 447 1.61e-65 218
Msa1136310 AT3G55710.1 31.809 481 275 17 6 462 4 455 2.47e-65 218
Msa1136310 AT2G31790.1 31.924 473 277 15 7 458 5 453 4.13e-65 217
Msa1136310 AT2G28080.1 31.423 471 285 12 14 464 22 474 4.17e-65 218
Msa1136310 AT2G36770.1 29.051 506 292 15 2 462 6 489 1.95e-63 213
Msa1136310 AT4G01070.1 32.657 493 257 15 6 454 4 465 2.04e-63 213
Msa1136310 AT1G05675.1 30.704 469 280 13 10 458 6 449 2.37e-62 209
Msa1136310 AT2G36760.1 29.637 496 286 16 10 462 14 489 1.83e-59 203
Msa1136310 AT2G36800.1 30.909 495 282 17 10 462 12 488 1.86e-59 203
Msa1136310 AT2G36780.1 29.577 497 285 15 10 462 14 489 1.88e-59 203
Msa1136310 AT2G36750.1 30.723 498 277 17 10 462 10 484 2.49e-59 202
Msa1136310 AT4G34131.1 29.713 488 305 14 1 460 1 478 3.54e-59 202
Msa1136310 AT2G23250.1 29.957 464 281 13 13 461 1 435 1.41e-58 199
Msa1136310 AT3G53160.1 29.532 491 293 15 10 462 8 483 2.03e-58 200
Msa1136310 AT5G17050.1 28.719 484 284 13 6 462 8 457 1.66e-57 197
Msa1136310 AT1G05560.1 28.302 477 289 17 9 461 4 451 6.22e-57 196
Msa1136310 AT2G15480.1 28.571 490 319 10 1 465 1 484 1.17e-56 195
Msa1136310 AT1G05560.2 28.302 477 289 17 9 461 54 501 1.43e-56 196
Msa1136310 AT4G15550.1 29.485 485 285 14 9 460 12 472 4.04e-56 194
Msa1136310 AT2G23260.1 30.105 475 288 14 7 463 7 455 5.20e-56 193
Msa1136310 AT2G36790.1 31.809 503 287 17 1 462 1 488 5.08e-55 191
Msa1136310 AT2G15480.2 28.400 500 317 11 1 465 1 494 9.48e-55 190
Msa1136310 AT5G17040.1 26.282 468 298 9 10 462 5 440 2.50e-54 188
Msa1136310 AT5G66690.1 28.858 499 272 17 8 460 5 466 3.27e-54 189
Msa1136310 AT1G05530.1 28.306 484 287 15 8 462 3 455 4.79e-54 187
Msa1136310 AT3G53150.1 28.770 504 299 16 7 462 19 510 8.52e-54 188
Msa1136310 AT2G15490.3 29.485 485 303 12 10 465 7 481 1.77e-53 187
Msa1136310 AT5G26310.1 27.912 498 278 17 8 460 5 466 3.51e-53 186
Msa1136310 AT1G01420.2 30.189 477 284 14 9 457 10 465 5.89e-53 185
Msa1136310 AT2G15490.1 29.303 488 303 12 10 465 7 484 7.24e-53 185
Msa1136310 AT1G01420.1 30.189 477 284 14 9 457 7 462 7.96e-53 185
Msa1136310 AT1G30530.1 27.932 469 290 11 11 462 14 451 1.04e-52 184
Msa1136310 AT2G30140.2 28.512 477 285 13 6 461 9 450 1.46e-52 184
Msa1136310 AT2G30140.1 28.452 478 285 13 6 461 9 451 1.59e-52 184
Msa1136310 AT5G17030.1 27.273 473 304 11 6 462 8 456 2.73e-52 183
Msa1136310 AT4G34138.1 28.313 498 293 14 8 465 9 482 3.14e-52 184
Msa1136310 AT5G17040.2 30.769 299 179 4 173 462 59 338 6.85e-51 176
Msa1136310 AT4G14090.1 28.692 474 291 16 6 460 9 454 1.59e-50 178
Msa1136310 AT1G24100.1 29.243 489 272 15 8 461 9 458 7.09e-50 176
Msa1136310 AT5G14860.1 29.878 492 291 16 5 461 3 475 2.41e-49 176
Msa1136310 AT4G34135.1 27.812 489 304 14 6 460 7 480 4.53e-47 169
Msa1136310 AT3G22250.1 27.696 473 285 13 5 443 3 452 6.02e-47 169
Msa1136310 AT1G01390.1 29.039 489 285 17 9 464 7 466 8.41e-46 166
Msa1136310 AT1G01390.2 29.039 489 285 17 9 464 24 483 1.11e-45 166
Msa1136310 AT2G30150.2 26.778 478 286 13 10 461 13 452 1.14e-45 165
Msa1136310 AT1G10400.1 27.443 481 299 16 7 460 4 461 5.91e-45 163
Msa1136310 AT3G50740.1 27.237 503 281 19 8 460 5 472 1.96e-44 162
Msa1136310 AT2G30150.1 26.582 474 284 13 14 461 1 436 4.98e-44 160
Msa1136310 AT3G16520.3 28.412 359 222 11 122 459 113 457 1.24e-42 157
Msa1136310 AT5G03490.1 28.000 475 294 16 6 460 15 461 2.61e-42 156
Msa1136310 AT3G16520.2 30.205 341 199 11 122 436 113 440 3.84e-42 155
Msa1136310 AT3G16520.1 30.233 344 195 11 122 436 113 440 5.41e-42 155
Msa1136310 AT2G16890.2 27.510 498 286 18 10 466 9 472 3.36e-41 153
Msa1136310 AT1G73880.1 28.367 490 289 19 6 462 7 467 1.02e-40 152
Msa1136310 AT2G29710.1 26.230 488 292 18 12 462 7 463 2.72e-40 150
Msa1136310 AT4G36770.1 28.481 474 265 16 10 442 4 444 9.08e-40 149
Msa1136310 AT5G37950.1 29.570 372 216 11 25 379 1 343 7.33e-39 144
Msa1136310 AT4G15280.1 25.502 498 295 12 12 462 6 474 1.33e-38 146
Msa1136310 AT5G37950.2 29.891 368 214 12 25 379 1 337 1.40e-38 143
Msa1136310 AT4G15280.2 25.502 498 295 12 12 462 38 506 1.97e-38 146
Msa1136310 AT3G21750.1 26.008 496 298 14 8 462 2 469 1.17e-37 144
Msa1136310 AT2G18560.1 26.854 391 221 13 105 454 3 369 1.19e-37 142
Msa1136310 AT3G21800.1 26.854 499 286 15 12 461 7 475 2.82e-36 140
Msa1136310 AT2G18570.1 25.103 486 296 17 8 454 3 459 5.65e-36 139
Msa1136310 AT2G29730.1 26.195 481 301 16 12 462 7 463 7.29e-36 138
Msa1136310 AT3G21760.1 26.200 500 294 15 12 461 6 480 1.37e-35 138
Msa1136310 AT3G21790.1 26.978 493 297 12 12 461 6 478 1.79e-35 138
Msa1136310 AT4G15260.1 27.945 365 210 8 135 462 7 355 4.01e-35 134
Msa1136310 AT1G51210.1 27.938 451 267 18 8 436 18 432 6.32e-35 135
Msa1136310 AT5G49690.1 26.697 442 282 16 10 433 10 427 6.67e-34 133
Msa1136310 AT2G29740.1 26.598 485 307 12 6 458 4 471 1.25e-33 132
Msa1136310 AT1G07250.1 30.576 278 168 7 199 462 207 473 1.33e-33 132
Msa1136310 AT1G07260.1 28.102 274 175 6 202 462 208 472 5.41e-33 130
Msa1136310 AT5G65550.1 25.764 458 290 15 8 439 7 440 9.31e-33 130
Msa1136310 AT2G29750.1 26.585 489 297 17 12 462 10 474 1.25e-32 129
Msa1136310 AT3G21780.1 27.054 499 287 17 8 461 2 468 4.37e-32 128
Msa1136310 AT1G07240.1 28.058 278 175 7 201 462 208 476 3.37e-31 125
Msa1136310 AT2G16890.3 26.340 429 251 15 10 406 9 404 7.40e-31 124
Msa1136310 AT4G01070.2 31.672 341 180 11 6 324 4 313 3.21e-30 120
Msa1136310 AT1G06000.1 25.773 485 288 13 1 463 1 435 1.13e-29 120
Msa1136310 AT5G12890.1 25.992 504 293 21 12 465 12 485 1.59e-28 118
Msa1136310 AT2G22590.1 25.216 464 283 14 8 437 13 446 1.40e-25 109
Msa1136310 AT4G34135.2 27.545 334 205 11 6 316 7 326 9.51e-23 99.4
Msa1136310 AT2G22930.1 22.814 469 308 13 10 461 6 437 3.20e-17 84.3
Msa1136310 AT1G64910.1 22.768 448 292 17 10 438 6 418 5.02e-17 83.6
Msa1136310 AT4G27570.1 27.869 183 120 5 266 438 244 424 5.75e-17 83.6
Msa1136310 AT4G27560.1 27.322 183 121 5 266 438 244 424 4.41e-16 80.9
Msa1136310 AT2G23210.1 24.324 296 187 10 1 284 1 271 2.04e-15 77.0
Msa1136310 AT5G54010.1 22.561 492 310 21 5 464 1 453 3.05e-15 78.2
Msa1136310 AT4G09500.1 28.824 170 109 5 279 438 226 393 1.34e-14 75.9
Msa1136310 AT4G09500.2 28.824 170 109 5 279 438 251 418 1.38e-14 76.3
Msa1136310 AT5G54060.1 26.362 459 274 21 12 437 15 442 1.55e-14 75.9
Msa1136310 AT5G53990.1 22.049 449 294 15 10 438 6 418 2.75e-14 75.1
Msa1136310 AT3G29630.2 29.592 196 117 6 272 463 220 398 5.15e-14 74.3
Msa1136310 AT3G29630.1 29.592 196 117 6 272 463 246 424 5.85e-14 74.3
Msa1136310 AT1G64920.1 26.519 181 117 6 272 438 244 422 7.27e-12 67.8
Msa1136310 AT1G50580.1 23.598 428 262 14 5 412 1 383 4.27e-11 65.1

Find 96 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATATATCTACAGTTTAT+TGG 0.144722 7_4:+4653071 None:intergenic
GCAAAACTTCTTCATATTAA+AGG 0.147229 7_4:-4654661 Msa1136310:CDS
CATCTTTAGGTTCAAATCTT+TGG 0.169174 7_4:-4653466 Msa1136310:CDS
TTCAATGACAAATTCTAAAA+TGG 0.170437 7_4:+4653646 None:intergenic
AGGATCTACCTGACGTAATA+AGG 0.252720 7_4:-4653688 Msa1136310:CDS
GTAGATATATATGCAATATA+TGG 0.270450 7_4:-4653061 Msa1136310:CDS
GAACTTGGACAAGGTTATTA+AGG 0.278762 7_4:-4652877 Msa1136310:CDS
CATAGTAACTTGGCATCTTT+AGG 0.280176 7_4:-4653479 Msa1136310:CDS
TCAGCAACTTGTATGGTAAA+TGG 0.305820 7_4:+4654352 None:intergenic
ATATGCCCTTGAAGAGGATA+TGG 0.330531 7_4:+4654703 None:intergenic
GTATGAACAACCACCGATAC+TGG 0.379700 7_4:+4652902 None:intergenic
ATTAGAGTTTGCTTGGGGTT+TGG 0.381595 7_4:-4653342 Msa1136310:CDS
GTTGGTGAAAAGAGAAGGAT+TGG 0.388786 7_4:+4654316 None:intergenic
GATTTGATGGTAGGAGATAA+AGG 0.399806 7_4:-4652978 Msa1136310:CDS
TCAGAAACTAAGCAAGTAAC+TGG 0.402772 7_4:+4654385 None:intergenic
AGCAACTATTAGAGTTTGCT+TGG 0.402899 7_4:-4653349 Msa1136310:CDS
AAACTCAGATGACATAATAA+AGG 0.403710 7_4:+4653262 None:intergenic
TCTGTTGTTTATGTGAGTTT+TGG 0.408759 7_4:-4653395 Msa1136310:CDS
AGAGGTTCTAATTCTCTTGA+TGG 0.408792 7_4:-4654583 Msa1136310:CDS
GGCAAAATGCCGTAGAGTTA+AGG 0.409968 7_4:-4652944 Msa1136310:CDS
TTGATTCCATATCCTCTTCA+AGG 0.418412 7_4:-4654709 Msa1136310:CDS
GAAGCTGATCAATGATTTGA+TGG 0.424013 7_4:-4652991 Msa1136310:CDS
GCAACTATTAGAGTTTGCTT+GGG 0.431882 7_4:-4653348 Msa1136310:CDS
ATTGCAGAACTTTCGATTGA+AGG 0.433558 7_4:-4653708 Msa1136310:CDS
TTCCCTTCATTATATACCAT+TGG 0.440869 7_4:-4653533 Msa1136310:CDS
CTTCATGACTCTGCCGATGC+TGG 0.443300 7_4:-4654418 Msa1136310:CDS
TGCTTTCTTCCTTAACTCTA+CGG 0.448459 7_4:+4652935 None:intergenic
CCATTGGAGTTAGACCATCT+TGG 0.451949 7_4:+4654533 None:intergenic
ATTCTCTTCAGCAACTTGTA+TGG 0.457568 7_4:+4654345 None:intergenic
ATTAGGTCTGATCTTGTCAT+TGG 0.460027 7_4:-4653290 Msa1136310:CDS
GGTCCAATGGTATATAATGA+AGG 0.464084 7_4:+4653530 None:intergenic
GTATTGAACCACCCTTCAAT+TGG 0.464768 7_4:-4653185 Msa1136310:CDS
TCAATGACAAATTCTAAAAT+GGG 0.466000 7_4:+4653647 None:intergenic
AAGAACTTCATCAAACCCTT+TGG 0.468245 7_4:-4654457 Msa1136310:CDS
TGTCAAACATTGTACGAAAG+TGG 0.469912 7_4:+4654266 None:intergenic
GCAAACTCTAATAGTTGCTC+TGG 0.475575 7_4:+4653353 None:intergenic
TAGATATATATGCAATATAT+GGG 0.477765 7_4:-4653060 Msa1136310:CDS
GATGGTCTCAAAGACAAAAT+CGG 0.478151 7_4:+4654555 None:intergenic
TCTTGAATGGCTTGAATCAA+AGG 0.484419 7_4:-4653426 Msa1136310:CDS
GGATCTACCTGACGTAATAA+GGG 0.494934 7_4:-4653687 Msa1136310:CDS
TTGAACCACCCTTCAATTGG+TGG 0.497309 7_4:-4653182 Msa1136310:CDS
AGGTCTGATCTTGTCATTGG+CGG 0.501968 7_4:-4653287 Msa1136310:CDS
CTGATCAATGATTTGATGGT+AGG 0.502484 7_4:-4652987 Msa1136310:CDS
TTAGAATTTGTCATTGAAGT+GGG 0.502488 7_4:-4653641 Msa1136310:CDS
AACCTCTTGATTTAAGCAAA+CGG 0.503323 7_4:+4654599 None:intergenic
TTCAAGCCATTCAAGACACT+TGG 0.503510 7_4:+4653433 None:intergenic
ACATCACCATTACCTTCCAT+TGG 0.505333 7_4:+4654517 None:intergenic
GTCTTTGAGACCATCCAAGA+TGG 0.507826 7_4:-4654547 Msa1136310:CDS
TGATTTAGTAATGAAGGTAA+AGG 0.512922 7_4:+4653509 None:intergenic
GTCAAGAATCCACCAATTGA+AGG 0.516692 7_4:+4653173 None:intergenic
AAGATACCAAGTGTCTTGAA+TGG 0.518079 7_4:-4653439 Msa1136310:CDS
AACCGTTTGCTTAAATCAAG+AGG 0.522168 7_4:-4654601 Msa1136310:CDS
GAGATAAAGGAAAGAAGATG+AGG 0.528414 7_4:-4652965 Msa1136310:CDS
ATATGCAATATATGGGAGAC+TGG 0.528570 7_4:-4653053 Msa1136310:CDS
TTTAGAATTTGTCATTGAAG+TGG 0.535263 7_4:-4653642 Msa1136310:CDS
TGGTTGTTCATACATGAACT+TGG 0.545987 7_4:-4652892 Msa1136310:CDS
TCAAAATCCACATAGTAACT+TGG 0.546302 7_4:-4653489 Msa1136310:CDS
TCCAGCAAGTACGCTTTCGA+CGG 0.553800 7_4:+4653130 None:intergenic
CTGGAGTGCCGATGTTGTGT+TGG 0.554307 7_4:-4653112 Msa1136310:CDS
CTAACTCCAATGGAAGGTAA+TGG 0.556057 7_4:-4654523 Msa1136310:CDS
AAGAAGTTACACGCACTAGT+TGG 0.557458 7_4:+4654298 None:intergenic
TCTGCAACCCTTATTACGTC+AGG 0.561278 7_4:+4653680 None:intergenic
GCAGAAGAGAACACCAGTAT+CGG 0.561831 7_4:-4652915 Msa1136310:CDS
CCAAGATGGTCTAACTCCAA+TGG 0.563528 7_4:-4654533 Msa1136310:CDS
GTCCAATGGTATATAATGAA+GGG 0.565622 7_4:+4653531 None:intergenic
CACTAGTTGGTGAAAAGAGA+AGG 0.572924 7_4:+4654311 None:intergenic
GATTCTTGACTCATTGTGGA+TGG 0.573721 7_4:-4653160 Msa1136310:CDS
ACAGAGGTCTAATCGCAAGC+TGG 0.582653 7_4:-4653223 Msa1136310:CDS
CTAGCAAGAAGTTCACCAAA+GGG 0.583424 7_4:+4654442 None:intergenic
TAATGAAGGTAAAGGTCCAA+TGG 0.584631 7_4:+4653517 None:intergenic
TGGTTCAATACTTGCTCTTG+CGG 0.588307 7_4:+4653197 None:intergenic
TGATTCCATATCCTCTTCAA+GGG 0.591237 7_4:-4654708 Msa1136310:CDS
GGTGGATTCTTGACTCATTG+TGG 0.591311 7_4:-4653164 Msa1136310:CDS
TTTCGTACAATGTTTGACAA+AGG 0.592549 7_4:-4654262 Msa1136310:CDS
TTGGTGAAAAGAGAAGGATT+GGG 0.592979 7_4:+4654317 None:intergenic
CGCAAATGATTACCTTTGAG+CGG 0.593158 7_4:+4654232 None:intergenic
TCAAGAATCCACCAATTGAA+GGG 0.598039 7_4:+4653174 None:intergenic
GATGGTCTAACTCCAATGGA+AGG 0.600300 7_4:-4654529 Msa1136310:CDS
GGATTTATATGCCCTTGAAG+AGG 0.602809 7_4:+4654697 None:intergenic
AAAGATGCCAAGTTACTATG+TGG 0.604877 7_4:+4653482 None:intergenic
TGGAGTTAGACCATCTTGGA+TGG 0.607818 7_4:+4654537 None:intergenic
GAGAAAGAAATTTCAGACAG+AGG 0.609791 7_4:-4653239 Msa1136310:CDS
CTTGGACAAGGTTATTAAGG+AGG 0.609792 7_4:-4652874 Msa1136310:CDS
TGGTGGAATAAGTCCAGCAT+CGG 0.610775 7_4:+4654405 None:intergenic
TATGGAATCAACACAGCATG+TGG 0.611821 7_4:+4654721 None:intergenic
GAAACTAAGCAAGTAACTGG+TGG 0.614023 7_4:+4654388 None:intergenic
AAAGGTCTAATACCGCTCAA+AGG 0.620948 7_4:-4654244 Msa1136310:intron
ATTGTATTCTGTATTGACAA+AGG 0.621699 7_4:+4654627 None:intergenic
CAACTATTAGAGTTTGCTTG+GGG 0.622517 7_4:-4653347 Msa1136310:CDS
TTCATACATGAACTTGGACA+AGG 0.628136 7_4:-4652886 Msa1136310:CDS
ACTAGCAAGAAGTTCACCAA+AGG 0.637336 7_4:+4654441 None:intergenic
TAGTTGCTCTGGAGTCATGA+CGG 0.645295 7_4:+4653364 None:intergenic
GAAGAGAACACCAGTATCGG+TGG 0.672004 7_4:-4652912 Msa1136310:CDS
AGAATCCACCAATTGAAGGG+TGG 0.687311 7_4:+4653177 None:intergenic
AGTGTTAAAGATGATAGCAG+AGG 0.689062 7_4:+4653601 None:intergenic
TACTAATGTGAAGAGAGATG+AGG 0.701583 7_4:-4653018 Msa1136310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGAGAATTTTTAATTTGA+CGG - chr7_4:4653533-4653552 Msa1136310:CDS 15.0%
!! TAGATATATATGCAATATAT+GGG - chr7_4:4654539-4654558 Msa1136310:CDS 15.0%
!!! AATGAGAATTTTTAATTTGA+CGG - chr7_4:4653533-4653552 Msa1136310:CDS 15.0%
!! TAGATATATATGCAATATAT+GGG - chr7_4:4654539-4654558 Msa1136310:CDS 15.0%
!!! TCAATGACAAATTCTAAAAT+GGG + chr7_4:4653955-4653974 None:intergenic 20.0%
!!! TTCAATGACAAATTCTAAAA+TGG + chr7_4:4653956-4653975 None:intergenic 20.0%
!! CATATATATCTACAGTTTAT+TGG + chr7_4:4654531-4654550 None:intergenic 20.0%
!! GTAGATATATATGCAATATA+TGG - chr7_4:4654538-4654557 Msa1136310:CDS 20.0%
!!! TCAATGACAAATTCTAAAAT+GGG + chr7_4:4653955-4653974 None:intergenic 20.0%
!!! TTCAATGACAAATTCTAAAA+TGG + chr7_4:4653956-4653975 None:intergenic 20.0%
!! CATATATATCTACAGTTTAT+TGG + chr7_4:4654531-4654550 None:intergenic 20.0%
!! GTAGATATATATGCAATATA+TGG - chr7_4:4654538-4654557 Msa1136310:CDS 20.0%
! GCAAAACTTCTTCATATTAA+AGG - chr7_4:4652938-4652957 Msa1136310:CDS 25.0%
!! ATTGTATTCTGTATTGACAA+AGG + chr7_4:4652975-4652994 None:intergenic 25.0%
!!! AGAATTTTTAATTTGACGGT+TGG - chr7_4:4653537-4653556 Msa1136310:CDS 25.0%
!!! ATTGATAATGACTCATTAAC+CGG - chr7_4:4653576-4653595 Msa1136310:CDS 25.0%
!! TTTAGAATTTGTCATTGAAG+TGG - chr7_4:4653957-4653976 Msa1136310:intron 25.0%
! TTAGAATTTGTCATTGAAGT+GGG - chr7_4:4653958-4653977 Msa1136310:intron 25.0%
! TGATTTAGTAATGAAGGTAA+AGG + chr7_4:4654093-4654112 None:intergenic 25.0%
!!! GGATTTTGATTTAGTAATGA+AGG + chr7_4:4654099-4654118 None:intergenic 25.0%
! AAACTCAGATGACATAATAA+AGG + chr7_4:4654340-4654359 None:intergenic 25.0%
! GCAAAACTTCTTCATATTAA+AGG - chr7_4:4652938-4652957 Msa1136310:CDS 25.0%
!! ATTGTATTCTGTATTGACAA+AGG + chr7_4:4652975-4652994 None:intergenic 25.0%
!!! AGAATTTTTAATTTGACGGT+TGG - chr7_4:4653537-4653556 Msa1136310:CDS 25.0%
!!! ATTGATAATGACTCATTAAC+CGG - chr7_4:4653576-4653595 Msa1136310:CDS 25.0%
!! TTTAGAATTTGTCATTGAAG+TGG - chr7_4:4653957-4653976 Msa1136310:intron 25.0%
! TTAGAATTTGTCATTGAAGT+GGG - chr7_4:4653958-4653977 Msa1136310:intron 25.0%
! TGATTTAGTAATGAAGGTAA+AGG + chr7_4:4654093-4654112 None:intergenic 25.0%
!!! GGATTTTGATTTAGTAATGA+AGG + chr7_4:4654099-4654118 None:intergenic 25.0%
! AAACTCAGATGACATAATAA+AGG + chr7_4:4654340-4654359 None:intergenic 25.0%
AACCTCTTGATTTAAGCAAA+CGG + chr7_4:4653003-4653022 None:intergenic 30.0%
TTTCGTACAATGTTTGACAA+AGG - chr7_4:4653337-4653356 Msa1136310:CDS 30.0%
TTCCCTTCATTATATACCAT+TGG - chr7_4:4654066-4654085 Msa1136310:intron 30.0%
GTCCAATGGTATATAATGAA+GGG + chr7_4:4654071-4654090 None:intergenic 30.0%
TCAAAATCCACATAGTAACT+TGG - chr7_4:4654110-4654129 Msa1136310:intron 30.0%
! CATCTTTAGGTTCAAATCTT+TGG - chr7_4:4654133-4654152 Msa1136310:intron 30.0%
!! TCTGTTGTTTATGTGAGTTT+TGG - chr7_4:4654204-4654223 Msa1136310:intron 30.0%
!! ATAGCAAGAAACCATTTTTG+TGG - chr7_4:4654283-4654302 Msa1136310:CDS 30.0%
!! AACCATTTTTGTGGATCATT+AGG - chr7_4:4654292-4654311 Msa1136310:CDS 30.0%
ATTGGTTGATCACCAAAAAA+TGG + chr7_4:4654513-4654532 None:intergenic 30.0%
AACCTCTTGATTTAAGCAAA+CGG + chr7_4:4653003-4653022 None:intergenic 30.0%
TTTCGTACAATGTTTGACAA+AGG - chr7_4:4653337-4653356 Msa1136310:CDS 30.0%
TTCCCTTCATTATATACCAT+TGG - chr7_4:4654066-4654085 Msa1136310:intron 30.0%
GTCCAATGGTATATAATGAA+GGG + chr7_4:4654071-4654090 None:intergenic 30.0%
TCAAAATCCACATAGTAACT+TGG - chr7_4:4654110-4654129 Msa1136310:intron 30.0%
! CATCTTTAGGTTCAAATCTT+TGG - chr7_4:4654133-4654152 Msa1136310:intron 30.0%
!! TCTGTTGTTTATGTGAGTTT+TGG - chr7_4:4654204-4654223 Msa1136310:intron 30.0%
!! ATAGCAAGAAACCATTTTTG+TGG - chr7_4:4654283-4654302 Msa1136310:CDS 30.0%
!! AACCATTTTTGTGGATCATT+AGG - chr7_4:4654292-4654311 Msa1136310:CDS 30.0%
ATTGGTTGATCACCAAAAAA+TGG + chr7_4:4654513-4654532 None:intergenic 30.0%
TTGATTCCATATCCTCTTCA+AGG - chr7_4:4652890-4652909 Msa1136310:CDS 35.0%
TGATTCCATATCCTCTTCAA+GGG - chr7_4:4652891-4652910 Msa1136310:CDS 35.0%
!!! AGTTTTGCTAGTTTTAGCAG+TGG + chr7_4:4652926-4652945 None:intergenic 35.0%
AACCGTTTGCTTAAATCAAG+AGG - chr7_4:4652998-4653017 Msa1136310:CDS 35.0%
! AGAGGTTCTAATTCTCTTGA+TGG - chr7_4:4653016-4653035 Msa1136310:CDS 35.0%
GATGGTCTCAAAGACAAAAT+CGG + chr7_4:4653047-4653066 None:intergenic 35.0%
AAGAACTTCATCAAACCCTT+TGG - chr7_4:4653142-4653161 Msa1136310:CDS 35.0%
TCAGAAACTAAGCAAGTAAC+TGG + chr7_4:4653217-4653236 None:intergenic 35.0%
TCAGCAACTTGTATGGTAAA+TGG + chr7_4:4653250-4653269 None:intergenic 35.0%
ATTCTCTTCAGCAACTTGTA+TGG + chr7_4:4653257-4653276 None:intergenic 35.0%
TTGGTGAAAAGAGAAGGATT+GGG + chr7_4:4653285-4653304 None:intergenic 35.0%
TGTCAAACATTGTACGAAAG+TGG + chr7_4:4653336-4653355 None:intergenic 35.0%
CAACTCGTCAAATTGCTATA+AGG + chr7_4:4653505-4653524 None:intergenic 35.0%
GTAATATTGAGTAGAGTCAC+CGG + chr7_4:4653598-4653617 None:intergenic 35.0%
TGAGTCTCGTCAAATTATGT+GGG + chr7_4:4653739-4653758 None:intergenic 35.0%
ATGAGTCTCGTCAAATTATG+TGG + chr7_4:4653740-4653759 None:intergenic 35.0%
!! AAAGAAGTCAATAGCTTGCT+AGG + chr7_4:4653813-4653832 None:intergenic 35.0%
ATTGCAGAACTTTCGATTGA+AGG - chr7_4:4653891-4653910 Msa1136310:intron 35.0%
AGTGTTAAAGATGATAGCAG+AGG + chr7_4:4654001-4654020 None:intergenic 35.0%
GGTCCAATGGTATATAATGA+AGG + chr7_4:4654072-4654091 None:intergenic 35.0%
TAATGAAGGTAAAGGTCCAA+TGG + chr7_4:4654085-4654104 None:intergenic 35.0%
AAAGATGCCAAGTTACTATG+TGG + chr7_4:4654120-4654139 None:intergenic 35.0%
CATAGTAACTTGGCATCTTT+AGG - chr7_4:4654120-4654139 Msa1136310:intron 35.0%
AAGATACCAAGTGTCTTGAA+TGG - chr7_4:4654160-4654179 Msa1136310:intron 35.0%
TCTTGAATGGCTTGAATCAA+AGG - chr7_4:4654173-4654192 Msa1136310:intron 35.0%
! AGCAACTATTAGAGTTTGCT+TGG - chr7_4:4654250-4654269 Msa1136310:CDS 35.0%
! GCAACTATTAGAGTTTGCTT+GGG - chr7_4:4654251-4654270 Msa1136310:CDS 35.0%
! CAACTATTAGAGTTTGCTTG+GGG - chr7_4:4654252-4654271 Msa1136310:CDS 35.0%
GACCTAATGATCCACAAAAA+TGG + chr7_4:4654297-4654316 None:intergenic 35.0%
ATTAGGTCTGATCTTGTCAT+TGG - chr7_4:4654309-4654328 Msa1136310:CDS 35.0%
GAGAAAGAAATTTCAGACAG+AGG - chr7_4:4654360-4654379 Msa1136310:CDS 35.0%
TCAAGAATCCACCAATTGAA+GGG + chr7_4:4654428-4654447 None:intergenic 35.0%
AAAAATGGCCAACACAACAT+CGG + chr7_4:4654498-4654517 None:intergenic 35.0%
!!! ATGTTGTGTTGGCCATTTTT+TGG - chr7_4:4654498-4654517 Msa1136310:CDS 35.0%
ATATGCAATATATGGGAGAC+TGG - chr7_4:4654546-4654565 Msa1136310:CDS 35.0%
TACTAATGTGAAGAGAGATG+AGG - chr7_4:4654581-4654600 Msa1136310:CDS 35.0%
GAAGCTGATCAATGATTTGA+TGG - chr7_4:4654608-4654627 Msa1136310:CDS 35.0%
! CTGATCAATGATTTGATGGT+AGG - chr7_4:4654612-4654631 Msa1136310:CDS 35.0%
! GATTTGATGGTAGGAGATAA+AGG - chr7_4:4654621-4654640 Msa1136310:CDS 35.0%
GAGATAAAGGAAAGAAGATG+AGG - chr7_4:4654634-4654653 Msa1136310:CDS 35.0%
TGCTTTCTTCCTTAACTCTA+CGG + chr7_4:4654667-4654686 None:intergenic 35.0%
TGGTTGTTCATACATGAACT+TGG - chr7_4:4654707-4654726 Msa1136310:CDS 35.0%
TTCATACATGAACTTGGACA+AGG - chr7_4:4654713-4654732 Msa1136310:CDS 35.0%
GAACTTGGACAAGGTTATTA+AGG - chr7_4:4654722-4654741 Msa1136310:CDS 35.0%
TTGATTCCATATCCTCTTCA+AGG - chr7_4:4652890-4652909 Msa1136310:CDS 35.0%
TGATTCCATATCCTCTTCAA+GGG - chr7_4:4652891-4652910 Msa1136310:CDS 35.0%
!!! AGTTTTGCTAGTTTTAGCAG+TGG + chr7_4:4652926-4652945 None:intergenic 35.0%
AACCGTTTGCTTAAATCAAG+AGG - chr7_4:4652998-4653017 Msa1136310:CDS 35.0%
! AGAGGTTCTAATTCTCTTGA+TGG - chr7_4:4653016-4653035 Msa1136310:CDS 35.0%
GATGGTCTCAAAGACAAAAT+CGG + chr7_4:4653047-4653066 None:intergenic 35.0%
AAGAACTTCATCAAACCCTT+TGG - chr7_4:4653142-4653161 Msa1136310:CDS 35.0%
TCAGAAACTAAGCAAGTAAC+TGG + chr7_4:4653217-4653236 None:intergenic 35.0%
TCAGCAACTTGTATGGTAAA+TGG + chr7_4:4653250-4653269 None:intergenic 35.0%
ATTCTCTTCAGCAACTTGTA+TGG + chr7_4:4653257-4653276 None:intergenic 35.0%
TTGGTGAAAAGAGAAGGATT+GGG + chr7_4:4653285-4653304 None:intergenic 35.0%
TGTCAAACATTGTACGAAAG+TGG + chr7_4:4653336-4653355 None:intergenic 35.0%
CAACTCGTCAAATTGCTATA+AGG + chr7_4:4653505-4653524 None:intergenic 35.0%
GTAATATTGAGTAGAGTCAC+CGG + chr7_4:4653598-4653617 None:intergenic 35.0%
TGAGTCTCGTCAAATTATGT+GGG + chr7_4:4653739-4653758 None:intergenic 35.0%
ATGAGTCTCGTCAAATTATG+TGG + chr7_4:4653740-4653759 None:intergenic 35.0%
!! AAAGAAGTCAATAGCTTGCT+AGG + chr7_4:4653813-4653832 None:intergenic 35.0%
ATTGCAGAACTTTCGATTGA+AGG - chr7_4:4653891-4653910 Msa1136310:intron 35.0%
AGTGTTAAAGATGATAGCAG+AGG + chr7_4:4654001-4654020 None:intergenic 35.0%
GGTCCAATGGTATATAATGA+AGG + chr7_4:4654072-4654091 None:intergenic 35.0%
TAATGAAGGTAAAGGTCCAA+TGG + chr7_4:4654085-4654104 None:intergenic 35.0%
AAAGATGCCAAGTTACTATG+TGG + chr7_4:4654120-4654139 None:intergenic 35.0%
CATAGTAACTTGGCATCTTT+AGG - chr7_4:4654120-4654139 Msa1136310:intron 35.0%
AAGATACCAAGTGTCTTGAA+TGG - chr7_4:4654160-4654179 Msa1136310:intron 35.0%
TCTTGAATGGCTTGAATCAA+AGG - chr7_4:4654173-4654192 Msa1136310:intron 35.0%
! AGCAACTATTAGAGTTTGCT+TGG - chr7_4:4654250-4654269 Msa1136310:CDS 35.0%
! GCAACTATTAGAGTTTGCTT+GGG - chr7_4:4654251-4654270 Msa1136310:CDS 35.0%
! CAACTATTAGAGTTTGCTTG+GGG - chr7_4:4654252-4654271 Msa1136310:CDS 35.0%
GACCTAATGATCCACAAAAA+TGG + chr7_4:4654297-4654316 None:intergenic 35.0%
ATTAGGTCTGATCTTGTCAT+TGG - chr7_4:4654309-4654328 Msa1136310:CDS 35.0%
GAGAAAGAAATTTCAGACAG+AGG - chr7_4:4654360-4654379 Msa1136310:CDS 35.0%
TCAAGAATCCACCAATTGAA+GGG + chr7_4:4654428-4654447 None:intergenic 35.0%
AAAAATGGCCAACACAACAT+CGG + chr7_4:4654498-4654517 None:intergenic 35.0%
!!! ATGTTGTGTTGGCCATTTTT+TGG - chr7_4:4654498-4654517 Msa1136310:CDS 35.0%
ATATGCAATATATGGGAGAC+TGG - chr7_4:4654546-4654565 Msa1136310:CDS 35.0%
TACTAATGTGAAGAGAGATG+AGG - chr7_4:4654581-4654600 Msa1136310:CDS 35.0%
GAAGCTGATCAATGATTTGA+TGG - chr7_4:4654608-4654627 Msa1136310:CDS 35.0%
! CTGATCAATGATTTGATGGT+AGG - chr7_4:4654612-4654631 Msa1136310:CDS 35.0%
! GATTTGATGGTAGGAGATAA+AGG - chr7_4:4654621-4654640 Msa1136310:CDS 35.0%
GAGATAAAGGAAAGAAGATG+AGG - chr7_4:4654634-4654653 Msa1136310:CDS 35.0%
TGCTTTCTTCCTTAACTCTA+CGG + chr7_4:4654667-4654686 None:intergenic 35.0%
TGGTTGTTCATACATGAACT+TGG - chr7_4:4654707-4654726 Msa1136310:CDS 35.0%
TTCATACATGAACTTGGACA+AGG - chr7_4:4654713-4654732 Msa1136310:CDS 35.0%
GAACTTGGACAAGGTTATTA+AGG - chr7_4:4654722-4654741 Msa1136310:CDS 35.0%
TATGGAATCAACACAGCATG+TGG + chr7_4:4652881-4652900 None:intergenic 40.0%
ATATGCCCTTGAAGAGGATA+TGG + chr7_4:4652899-4652918 None:intergenic 40.0%
GGATTTATATGCCCTTGAAG+AGG + chr7_4:4652905-4652924 None:intergenic 40.0%
CTAACTCCAATGGAAGGTAA+TGG - chr7_4:4653076-4653095 Msa1136310:CDS 40.0%
ACATCACCATTACCTTCCAT+TGG + chr7_4:4653085-4653104 None:intergenic 40.0%
CTAGCAAGAAGTTCACCAAA+GGG + chr7_4:4653160-4653179 None:intergenic 40.0%
ACTAGCAAGAAGTTCACCAA+AGG + chr7_4:4653161-4653180 None:intergenic 40.0%
GAAACTAAGCAAGTAACTGG+TGG + chr7_4:4653214-4653233 None:intergenic 40.0%
! GTTGGTGAAAAGAGAAGGAT+TGG + chr7_4:4653286-4653305 None:intergenic 40.0%
!! CACTAGTTGGTGAAAAGAGA+AGG + chr7_4:4653291-4653310 None:intergenic 40.0%
AAGAAGTTACACGCACTAGT+TGG + chr7_4:4653304-4653323 None:intergenic 40.0%
AAAGGTCTAATACCGCTCAA+AGG - chr7_4:4653355-4653374 Msa1136310:CDS 40.0%
CGCAAATGATTACCTTTGAG+CGG + chr7_4:4653370-4653389 None:intergenic 40.0%
TCCTGGAATACAGTCTACTT+TGG + chr7_4:4653872-4653891 None:intergenic 40.0%
AATCGAAAGTTCTGCAATCC+TGG + chr7_4:4653889-4653908 None:intergenic 40.0%
AGGATCTACCTGACGTAATA+AGG - chr7_4:4653911-4653930 Msa1136310:intron 40.0%
GGATCTACCTGACGTAATAA+GGG - chr7_4:4653912-4653931 Msa1136310:intron 40.0%
TTCAAGCCATTCAAGACACT+TGG + chr7_4:4654169-4654188 None:intergenic 40.0%
GCAAACTCTAATAGTTGCTC+TGG + chr7_4:4654249-4654268 None:intergenic 40.0%
! ATTAGAGTTTGCTTGGGGTT+TGG - chr7_4:4654257-4654276 Msa1136310:CDS 40.0%
TGGTTCAATACTTGCTCTTG+CGG + chr7_4:4654405-4654424 None:intergenic 40.0%
GTATTGAACCACCCTTCAAT+TGG - chr7_4:4654414-4654433 Msa1136310:CDS 40.0%
GTCAAGAATCCACCAATTGA+AGG + chr7_4:4654429-4654448 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr7_4:4654439-4654458 Msa1136310:CDS 40.0%
CTTGGACAAGGTTATTAAGG+AGG - chr7_4:4654725-4654744 Msa1136310:CDS 40.0%
TATGGAATCAACACAGCATG+TGG + chr7_4:4652881-4652900 None:intergenic 40.0%
ATATGCCCTTGAAGAGGATA+TGG + chr7_4:4652899-4652918 None:intergenic 40.0%
GGATTTATATGCCCTTGAAG+AGG + chr7_4:4652905-4652924 None:intergenic 40.0%
CTAACTCCAATGGAAGGTAA+TGG - chr7_4:4653076-4653095 Msa1136310:CDS 40.0%
ACATCACCATTACCTTCCAT+TGG + chr7_4:4653085-4653104 None:intergenic 40.0%
CTAGCAAGAAGTTCACCAAA+GGG + chr7_4:4653160-4653179 None:intergenic 40.0%
ACTAGCAAGAAGTTCACCAA+AGG + chr7_4:4653161-4653180 None:intergenic 40.0%
GAAACTAAGCAAGTAACTGG+TGG + chr7_4:4653214-4653233 None:intergenic 40.0%
! GTTGGTGAAAAGAGAAGGAT+TGG + chr7_4:4653286-4653305 None:intergenic 40.0%
!! CACTAGTTGGTGAAAAGAGA+AGG + chr7_4:4653291-4653310 None:intergenic 40.0%
AAGAAGTTACACGCACTAGT+TGG + chr7_4:4653304-4653323 None:intergenic 40.0%
AAAGGTCTAATACCGCTCAA+AGG - chr7_4:4653355-4653374 Msa1136310:CDS 40.0%
CGCAAATGATTACCTTTGAG+CGG + chr7_4:4653370-4653389 None:intergenic 40.0%
TCCTGGAATACAGTCTACTT+TGG + chr7_4:4653872-4653891 None:intergenic 40.0%
AATCGAAAGTTCTGCAATCC+TGG + chr7_4:4653889-4653908 None:intergenic 40.0%
AGGATCTACCTGACGTAATA+AGG - chr7_4:4653911-4653930 Msa1136310:intron 40.0%
GGATCTACCTGACGTAATAA+GGG - chr7_4:4653912-4653931 Msa1136310:intron 40.0%
TTCAAGCCATTCAAGACACT+TGG + chr7_4:4654169-4654188 None:intergenic 40.0%
GCAAACTCTAATAGTTGCTC+TGG + chr7_4:4654249-4654268 None:intergenic 40.0%
! ATTAGAGTTTGCTTGGGGTT+TGG - chr7_4:4654257-4654276 Msa1136310:CDS 40.0%
TGGTTCAATACTTGCTCTTG+CGG + chr7_4:4654405-4654424 None:intergenic 40.0%
GTATTGAACCACCCTTCAAT+TGG - chr7_4:4654414-4654433 Msa1136310:CDS 40.0%
GTCAAGAATCCACCAATTGA+AGG + chr7_4:4654429-4654448 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr7_4:4654439-4654458 Msa1136310:CDS 40.0%
CTTGGACAAGGTTATTAAGG+AGG - chr7_4:4654725-4654744 Msa1136310:CDS 40.0%
!! GTCTTTGAGACCATCCAAGA+TGG - chr7_4:4653052-4653071 Msa1136310:CDS 45.0%
TGGAGTTAGACCATCTTGGA+TGG + chr7_4:4653065-4653084 None:intergenic 45.0%
CCATTGGAGTTAGACCATCT+TGG + chr7_4:4653069-4653088 None:intergenic 45.0%
CCAAGATGGTCTAACTCCAA+TGG - chr7_4:4653066-4653085 Msa1136310:CDS 45.0%
GATGGTCTAACTCCAATGGA+AGG - chr7_4:4653070-4653089 Msa1136310:CDS 45.0%
TGGTGGAATAAGTCCAGCAT+CGG + chr7_4:4653197-4653216 None:intergenic 45.0%
GCCAAAGTAGACTGTATTCC+AGG - chr7_4:4653868-4653887 Msa1136310:intron 45.0%
TCTGCAACCCTTATTACGTC+AGG + chr7_4:4653922-4653941 None:intergenic 45.0%
!! TAGTTGCTCTGGAGTCATGA+CGG + chr7_4:4654238-4654257 None:intergenic 45.0%
AGGTCTGATCTTGTCATTGG+CGG - chr7_4:4654312-4654331 Msa1136310:CDS 45.0%
TTGAACCACCCTTCAATTGG+TGG - chr7_4:4654417-4654436 Msa1136310:CDS 45.0%
AGAATCCACCAATTGAAGGG+TGG + chr7_4:4654425-4654444 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG - chr7_4:4654435-4654454 Msa1136310:CDS 45.0%
GGCAAAATGCCGTAGAGTTA+AGG - chr7_4:4654655-4654674 Msa1136310:CDS 45.0%
GCAGAAGAGAACACCAGTAT+CGG - chr7_4:4654684-4654703 Msa1136310:CDS 45.0%
GTATGAACAACCACCGATAC+TGG + chr7_4:4654700-4654719 None:intergenic 45.0%
!! GTCTTTGAGACCATCCAAGA+TGG - chr7_4:4653052-4653071 Msa1136310:CDS 45.0%
TGGAGTTAGACCATCTTGGA+TGG + chr7_4:4653065-4653084 None:intergenic 45.0%
CCATTGGAGTTAGACCATCT+TGG + chr7_4:4653069-4653088 None:intergenic 45.0%
CCAAGATGGTCTAACTCCAA+TGG - chr7_4:4653066-4653085 Msa1136310:CDS 45.0%
GATGGTCTAACTCCAATGGA+AGG - chr7_4:4653070-4653089 Msa1136310:CDS 45.0%
TGGTGGAATAAGTCCAGCAT+CGG + chr7_4:4653197-4653216 None:intergenic 45.0%
GCCAAAGTAGACTGTATTCC+AGG - chr7_4:4653868-4653887 Msa1136310:intron 45.0%
TCTGCAACCCTTATTACGTC+AGG + chr7_4:4653922-4653941 None:intergenic 45.0%
!! TAGTTGCTCTGGAGTCATGA+CGG + chr7_4:4654238-4654257 None:intergenic 45.0%
AGGTCTGATCTTGTCATTGG+CGG - chr7_4:4654312-4654331 Msa1136310:CDS 45.0%
TTGAACCACCCTTCAATTGG+TGG - chr7_4:4654417-4654436 Msa1136310:CDS 45.0%
AGAATCCACCAATTGAAGGG+TGG + chr7_4:4654425-4654444 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG - chr7_4:4654435-4654454 Msa1136310:CDS 45.0%
GGCAAAATGCCGTAGAGTTA+AGG - chr7_4:4654655-4654674 Msa1136310:CDS 45.0%
GCAGAAGAGAACACCAGTAT+CGG - chr7_4:4654684-4654703 Msa1136310:CDS 45.0%
GTATGAACAACCACCGATAC+TGG + chr7_4:4654700-4654719 None:intergenic 45.0%
ACAGAGGTCTAATCGCAAGC+TGG - chr7_4:4654376-4654395 Msa1136310:CDS 50.0%
TCCAGCAAGTACGCTTTCGA+CGG + chr7_4:4654472-4654491 None:intergenic 50.0%
! GAAGAGAACACCAGTATCGG+TGG - chr7_4:4654687-4654706 Msa1136310:CDS 50.0%
ACAGAGGTCTAATCGCAAGC+TGG - chr7_4:4654376-4654395 Msa1136310:CDS 50.0%
TCCAGCAAGTACGCTTTCGA+CGG + chr7_4:4654472-4654491 None:intergenic 50.0%
! GAAGAGAACACCAGTATCGG+TGG - chr7_4:4654687-4654706 Msa1136310:CDS 50.0%
CTTCATGACTCTGCCGATGC+TGG - chr7_4:4653181-4653200 Msa1136310:CDS 55.0%
! ACCGTCGAAAGCGTACTTGC+TGG - chr7_4:4654468-4654487 Msa1136310:CDS 55.0%
!! CTGGAGTGCCGATGTTGTGT+TGG - chr7_4:4654487-4654506 Msa1136310:CDS 55.0%
CTTCATGACTCTGCCGATGC+TGG - chr7_4:4653181-4653200 Msa1136310:CDS 55.0%
! ACCGTCGAAAGCGTACTTGC+TGG - chr7_4:4654468-4654487 Msa1136310:CDS 55.0%
!! CTGGAGTGCCGATGTTGTGT+TGG - chr7_4:4654487-4654506 Msa1136310:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 4652854 4654767 4652854 ID=Msa1136310;Name=Msa1136310
chr7_4 mRNA 4652854 4654767 4652854 ID=Msa1136310-mRNA-1;Parent=Msa1136310;Name=Msa1136310-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|466
chr7_4 exon 4654245 4654767 4654245 ID=Msa1136310-mRNA-1:exon:1242;Parent=Msa1136310-mRNA-1
chr7_4 exon 4652854 4653731 4652854 ID=Msa1136310-mRNA-1:exon:1241;Parent=Msa1136310-mRNA-1
chr7_4 CDS 4654245 4654767 4654245 ID=Msa1136310-mRNA-1:cds;Parent=Msa1136310-mRNA-1
chr7_4 CDS 4652854 4653731 4652854 ID=Msa1136310-mRNA-1:cds;Parent=Msa1136310-mRNA-1
Gene Sequence

>Msa1136310

ATGAGTTACATTGTTAATAAAAAGCCACATGCTGTGTTGATTCCATATCCTCTTCAAGGGCATATAAATCCACTGCTAAAACTAGCAAAACTTCTTCATATTAAAGGCTTTCACATAACCTTTGTCAATACAGAATACAATCACAACCGTTTGCTTAAATCAAGAGGTTCTAATTCTCTTGATGGTTTCACCGATTTTGTCTTTGAGACCATCCAAGATGGTCTAACTCCAATGGAAGGTAATGGTGATGTTAGTCAAGACTTGACATCTCTTTCTCAATCAGTTAGTAAGAACTTCATCAAACCCTTTGGTGAACTTCTTGCTAGTCTTCATGACTCTGCCGATGCTGGACTTATTCCACCAGTTACTTGCTTAGTTTCTGATTGTTACATGCCATTTACCATACAAGTTGCTGAAGAGAATGCACTCCCAATCCTTCTCTTTTCACCAACTAGTGCGTGTAACTTCTTAACTACTTTCCACTTTCGTACAATGTTTGACAAAGGTCTAATACCGCTCAAAGGATTGCAGAACTTTCGATTGAAGGATCTACCTGACGTAATAAGGGTTGCAGATCGTAAAGATCCCATTTTAGAATTTGTCATTGAAGTGGGAGATAGCTTTCACAAAGCCTCTGCTATCATCTTTAACACTTATGATGAACTCGAGAGTGATGTAATGAATGCACTATATTCTGTGTTCCCTTCATTATATACCATTGGACCTTTACCTTCATTACTAAATCAAAATCCACATAGTAACTTGGCATCTTTAGGTTCAAATCTTTGGAAAGAAGATACCAAGTGTCTTGAATGGCTTGAATCAAAGGAACTTGAGTCTGTTGTTTATGTGAGTTTTGGCAGCATTACCGTCATGACTCCAGAGCAACTATTAGAGTTTGCTTGGGGTTTGGCGAATAGCAAGAAACCATTTTTGTGGATCATTAGGTCTGATCTTGTCATTGGCGGCTCCTTTATTATGTCATCTGAGTTTGAGAAAGAAATTTCAGACAGAGGTCTAATCGCAAGCTGGTGTCCGCAAGAGCAAGTATTGAACCACCCTTCAATTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCGTCGAAAGCGTACTTGCTGGAGTGCCGATGTTGTGTTGGCCATTTTTTGGTGATCAACCAATAAACTGTAGATATATATGCAATATATGGGAGACTGGAATCGAAATCGATACTAATGTGAAGAGAGATGAGGTCGAGAAGCTGATCAATGATTTGATGGTAGGAGATAAAGGAAAGAAGATGAGGCAAAATGCCGTAGAGTTAAGGAAGAAAGCAGAAGAGAACACCAGTATCGGTGGTTGTTCATACATGAACTTGGACAAGGTTATTAAGGAGGTCTTGCTTAAAAAAAATTAG
Protein sequence

>Msa1136310

MSYIVNKKPHAVLIPYPLQGHINPLLKLAKLLHIKGFHITFVNTEYNHNRLLKSRGSNSLDGFTDFVFETIQDGLTPMEGNGDVSQDLTSLSQSVSKNFIKPFGELLASLHDSADAGLIPPVTCLVSDCYMPFTIQVAEENALPILLFSPTSACNFLTTFHFRTMFDKGLIPLKGLQNFRLKDLPDVIRVADRKDPILEFVIEVGDSFHKASAIIFNTYDELESDVMNALYSVFPSLYTIGPLPSLLNQNPHSNLASLGSNLWKEDTKCLEWLESKELESVVYVSFGSITVMTPEQLLEFAWGLANSKKPFLWIIRSDLVIGGSFIMSSEFEKEISDRGLIASWCPQEQVLNHPSIGGFLTHCGWNSTVESVLAGVPMLCWPFFGDQPINCRYICNIWETGIEIDTNVKRDEVEKLINDLMVGDKGKKMRQNAVELRKKAEENTSIGGCSYMNLDKVIKEVLLKKN*