AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1406130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406130 MtrunA17_Chr7g0217881 90.605 479 32 1 1 479 1 466 0.0 866
Msa1406130 MtrunA17_Chr6g0453951 76.907 485 106 2 1 479 47 531 0.0 791
Msa1406130 MtrunA17_Chr6g0454401 77.893 484 101 2 1 478 1 484 0.0 780
Msa1406130 MtrunA17_Chr6g0454361 76.101 477 109 1 8 479 9 485 0.0 752
Msa1406130 MtrunA17_Chr6g0454191 73.760 484 121 2 1 478 1 484 0.0 744
Msa1406130 MtrunA17_Chr6g0454351 73.045 486 107 3 1 479 1 469 0.0 737
Msa1406130 MtrunA17_Chr6g0454181 71.636 483 132 1 1 478 1 483 0.0 734
Msa1406130 MtrunA17_Chr6g0453961 72.784 485 126 2 1 479 10 494 0.0 732
Msa1406130 MtrunA17_Chr6g0454331 72.292 480 126 2 6 478 3 482 0.0 729
Msa1406130 MtrunA17_Chr6g0454211 72.822 482 126 1 2 478 289 770 0.0 721
Msa1406130 MtrunA17_Chr6g0454211 52.722 349 78 4 131 474 1 267 7.37e-107 335
Msa1406130 MtrunA17_Chr6g0452771 74.174 484 120 1 1 479 1 484 0.0 721
Msa1406130 MtrunA17_Chr6g0454261 71.843 483 131 1 1 478 1 483 0.0 717
Msa1406130 MtrunA17_Chr6g0454291 73.375 477 122 1 6 477 3 479 0.0 714
Msa1406130 MtrunA17_Chr8g0359821 71.636 483 130 2 1 478 1 481 0.0 711
Msa1406130 MtrunA17_Chr6g0454141 71.014 483 135 1 1 478 1 483 0.0 705
Msa1406130 MtrunA17_Chr6g0454301 71.636 483 128 3 1 477 254 733 0.0 704
Msa1406130 MtrunA17_Chr6g0454301 78.070 228 50 0 246 473 1 228 9.57e-125 380
Msa1406130 MtrunA17_Chr3g0078841 70.248 484 135 3 1 478 1 481 0.0 703
Msa1406130 MtrunA17_Chr6g0454201 74.160 476 118 1 8 478 9 484 0.0 703
Msa1406130 MtrunA17_Chr8g0336331 69.835 484 136 4 1 478 1 480 0.0 697
Msa1406130 MtrunA17_Chr6g0454341 69.628 484 138 3 1 478 1 481 0.0 696
Msa1406130 MtrunA17_Chr6g0454121 71.843 483 130 2 1 478 1 482 0.0 696
Msa1406130 MtrunA17_Chr6g0454321 69.263 475 137 3 1 469 1 472 0.0 681
Msa1406130 MtrunA17_Chr6g0454321 69.600 125 38 0 2 126 496 620 4.83e-51 183
Msa1406130 MtrunA17_Chr6g0454151 69.485 485 139 3 1 479 1 482 0.0 671
Msa1406130 MtrunA17_Chr6g0454131 69.565 483 141 2 1 478 1 482 0.0 671
Msa1406130 MtrunA17_Chr5g0423981 67.708 480 123 2 1 479 1 449 0.0 666
Msa1406130 MtrunA17_Chr6g0454251 68.957 393 117 1 6 393 3 395 0.0 579
Msa1406130 MtrunA17_Chr3g0092641 54.105 475 205 6 9 476 11 479 0.0 522
Msa1406130 MtrunA17_Chr5g0426431 53.846 481 209 6 4 477 6 480 2.45e-180 513
Msa1406130 MtrunA17_Chr2g0278711 52.807 481 210 6 7 478 8 480 6.65e-175 499
Msa1406130 MtrunA17_Chr8g0355011 60.660 394 103 5 92 478 17 365 4.07e-164 468
Msa1406130 MtrunA17_Chr6g0454271 72.414 290 80 0 189 478 1 290 3.57e-159 452
Msa1406130 MtrunA17_Chr3g0118711 46.555 479 243 5 5 475 8 481 8.19e-159 459
Msa1406130 MtrunA17_Chr3g0118691 45.851 482 248 5 5 478 10 486 1.25e-158 458
Msa1406130 MtrunA17_Chr3g0118771 46.653 478 242 5 6 475 17 489 1.53e-158 458
Msa1406130 MtrunA17_Chr3g0118671 46.138 479 245 5 5 475 1 474 1.11e-157 456
Msa1406130 MtrunA17_Chr3g0118701 45.094 479 250 5 5 475 10 483 2.19e-155 450
Msa1406130 MtrunA17_Chr4g0050341 48.233 481 236 5 8 478 17 494 7.28e-155 449
Msa1406130 MtrunA17_Chr6g0454171 61.453 358 85 4 131 479 1 314 5.29e-150 430
Msa1406130 MtrunA17_Chr3g0118751 44.351 478 226 7 5 475 1 445 8.75e-143 417
Msa1406130 MtrunA17_Chr3g0118661 44.864 477 249 6 6 474 9 479 7.69e-139 408
Msa1406130 MtrunA17_Chr6g0454221 83.843 229 36 1 246 473 1 229 1.84e-138 400
Msa1406130 MtrunA17_Chr6g0453981 77.056 231 48 1 131 356 1 231 1.55e-125 364
Msa1406130 MtrunA17_Chr5g0426401 54.967 302 132 3 178 476 12 312 3.43e-115 341
Msa1406130 MtrunA17_Chr6g0453941 73.874 222 52 2 132 347 54 275 1.98e-113 335
Msa1406130 MtrunA17_Chr6g0453941 68.254 63 15 2 1 62 1 59 2.29e-18 85.1
Msa1406130 MtrunA17_Chr3g0118721 50.171 293 143 2 189 478 1 293 1.89e-103 310
Msa1406130 MtrunA17_Chr6g0454371 82.184 174 31 0 305 478 1 174 3.42e-103 305
Msa1406130 MtrunA17_Chr3g0112771 38.025 476 260 10 5 475 7 452 6.44e-103 315
Msa1406130 MtrunA17_Chr6g0454231 63.922 255 53 3 222 475 3 219 1.16e-101 312
Msa1406130 MtrunA17_Chr6g0454231 62.083 240 83 2 1 235 241 477 1.43e-95 296
Msa1406130 MtrunA17_Chr5g0412111 36.421 475 276 9 9 474 4 461 1.25e-100 309
Msa1406130 MtrunA17_Chr8g0336271 60.081 248 90 3 1 243 1 244 3.54e-100 301
Msa1406130 MtrunA17_Chr5g0412131 36.117 479 273 9 9 474 11 469 3.95e-95 295
Msa1406130 MtrunA17_Chr6g0454281 68.205 195 57 1 1 190 1 195 1.13e-92 280
Msa1406130 MtrunA17_Chr5g0412101 36.268 477 276 11 9 474 11 470 4.04e-92 288
Msa1406130 MtrunA17_Chr4g0032331 34.322 472 271 13 12 475 10 450 3.14e-83 264
Msa1406130 MtrunA17_Chr3g0112761 34.255 470 274 11 12 475 10 450 6.53e-83 263
Msa1406130 MtrunA17_Chr8g0336261 79.562 137 28 0 305 441 1 137 9.80e-79 241
Msa1406130 MtrunA17_Chr1g0207981 31.753 485 290 12 10 476 13 474 4.85e-78 251
Msa1406130 MtrunA17_Chr3g0098111 32.083 480 292 11 10 474 9 469 7.93e-76 246
Msa1406130 MtrunA17_Chr7g0218831 30.835 467 284 10 9 471 5 436 5.82e-72 234
Msa1406130 MtrunA17_Chr6g0464881 29.691 485 300 11 4 478 5 458 2.26e-71 233
Msa1406130 MtrunA17_Chr8g0365811 31.198 484 289 12 12 474 497 957 5.75e-71 243
Msa1406130 MtrunA17_Chr8g0365811 31.070 486 291 14 12 474 11 475 6.59e-64 223
Msa1406130 MtrunA17_Chr7g0218811 31.906 467 280 11 9 471 14 446 5.17e-70 229
Msa1406130 MtrunA17_Chr1g0161351 31.875 480 293 11 10 474 37 497 1.22e-69 230
Msa1406130 MtrunA17_Chr4g0053501 29.560 477 303 11 12 477 13 467 1.99e-69 229
Msa1406130 MtrunA17_Chr7g0250001 29.645 479 298 11 5 475 1 448 1.48e-68 226
Msa1406130 MtrunA17_Chr4g0053321 30.816 490 298 15 4 477 18 482 1.83e-68 227
Msa1406130 MtrunA17_Chr7g0218841 31.557 469 279 11 9 471 5 437 1.95e-68 225
Msa1406130 MtrunA17_Chr5g0414321 32.091 483 278 14 6 475 7 452 4.06e-68 225
Msa1406130 MtrunA17_Chr8g0380531 32.558 473 286 13 10 474 10 457 5.61e-68 224
Msa1406130 MtrunA17_Chr1g0207861 32.292 480 291 11 10 474 8 468 5.74e-68 225
Msa1406130 MtrunA17_Chr5g0414331 31.435 474 285 13 6 471 9 450 6.66e-68 224
Msa1406130 MtrunA17_Chr7g0249981 31.557 469 288 12 4 467 19 459 2.72e-67 223
Msa1406130 MtrunA17_Chr7g0218791 31.092 476 277 15 9 471 4 441 2.76e-67 222
Msa1406130 MtrunA17_Chr1g0207971 30.672 476 289 12 10 474 8 453 3.00e-67 223
Msa1406130 MtrunA17_Chr5g0431441 31.733 479 284 12 10 475 18 466 1.46e-66 221
Msa1406130 MtrunA17_Chr6g0464921 30.335 478 293 13 9 476 10 457 3.21e-66 220
Msa1406130 MtrunA17_Chr1g0207831 31.185 481 286 14 12 474 10 463 5.46e-66 219
Msa1406130 MtrunA17_Chr7g0218821 29.362 470 291 11 9 467 4 443 2.07e-65 218
Msa1406130 MtrunA17_Chr6g0454111 67.114 149 48 1 178 325 35 183 6.86e-65 207
Msa1406130 MtrunA17_Chr1g0207951 31.185 481 290 13 6 474 119 570 1.49e-64 226
Msa1406130 MtrunA17_Chr1g0207951 31.762 488 284 14 6 474 651 1108 7.79e-64 224
Msa1406130 MtrunA17_Chr6g0464871 30.508 472 295 13 6 471 19 463 5.33e-64 214
Msa1406130 MtrunA17_Chr6g0464861 30.380 474 292 13 6 471 7 450 8.59e-64 213
Msa1406130 MtrunA17_Chr6g0464841 30.380 474 293 14 6 471 7 451 4.36e-63 211
Msa1406130 MtrunA17_Chr6g0454381 67.606 142 41 1 131 267 1 142 5.10e-59 191
Msa1406130 MtrunA17_Chr7g0275681 30.020 503 292 15 5 475 7 481 1.43e-58 200
Msa1406130 MtrunA17_Chr7g0243631 30.181 497 292 16 10 474 13 486 1.93e-58 200
Msa1406130 MtrunA17_Chr4g0044511 30.060 499 299 15 6 479 36 509 5.46e-58 199
Msa1406130 MtrunA17_Chr5g0401721 29.039 489 297 15 11 475 9 471 6.90e-58 198
Msa1406130 MtrunA17_Chr5g0393591 29.873 472 271 12 10 474 17 435 3.10e-57 196
Msa1406130 MtrunA17_Chr4g0011051 30.664 512 287 16 5 475 4 488 3.19e-57 197
Msa1406130 MtrunA17_Chr5g0419761 29.297 512 300 18 7 479 6 494 4.64e-57 196
Msa1406130 MtrunA17_Chr7g0243931 29.134 508 291 14 6 474 13 490 2.07e-56 195
Msa1406130 MtrunA17_Chr8g0377921 30.266 489 293 20 9 475 2 464 6.25e-56 193
Msa1406130 MtrunA17_Chr7g0249931 28.992 476 293 15 4 467 34 476 1.00e-55 193
Msa1406130 MtrunA17_Chr7g0243951 28.571 504 298 16 6 474 7 483 1.44e-55 192
Msa1406130 MtrunA17_Chr7g0265041 28.543 508 300 14 9 478 10 492 1.53e-55 192
Msa1406130 MtrunA17_Chr5g0431361 29.668 482 282 14 10 474 12 453 3.55e-55 191
Msa1406130 MtrunA17_Chr7g0265151 28.169 497 305 13 10 475 9 484 1.25e-54 190
Msa1406130 MtrunA17_Chr5g0426411 54.167 168 71 3 8 174 10 172 7.39e-54 178
Msa1406130 MtrunA17_Chr3g0121991 31.174 494 284 19 10 474 79 545 7.62e-54 189
Msa1406130 MtrunA17_Chr3g0122001 30.309 485 300 11 10 474 486 952 1.10e-53 194
Msa1406130 MtrunA17_Chr3g0122001 30.816 490 292 13 10 474 6 473 5.24e-52 189
Msa1406130 MtrunA17_Chr7g0243681 28.514 498 294 17 10 474 11 479 7.24e-53 185
Msa1406130 MtrunA17_Chr7g0243771 28.106 491 306 16 10 474 6 475 9.99e-53 185
Msa1406130 MtrunA17_Chr1g0207931 38.258 264 146 6 221 474 241 497 1.32e-52 185
Msa1406130 MtrunA17_Chr1g0207931 28.571 189 110 7 10 191 92 262 7.20e-12 67.4
Msa1406130 MtrunA17_Chr4g0060511 28.119 505 303 16 6 474 7 487 1.82e-52 184
Msa1406130 MtrunA17_Chr7g0243861 29.159 511 298 18 6 479 10 493 5.65e-52 183
Msa1406130 MtrunA17_Chr7g0265101 28.016 514 295 16 8 477 7 489 2.21e-51 182
Msa1406130 MtrunA17_Chr1g0179901 26.305 498 316 15 10 475 16 494 3.35e-51 181
Msa1406130 MtrunA17_Chr7g0243801 26.923 494 316 14 6 474 3 476 4.52e-51 181
Msa1406130 MtrunA17_Chr8g0335141 30.020 493 290 19 3 470 2 464 5.05e-51 180
Msa1406130 MtrunA17_Chr5g0419771 27.944 501 303 16 10 475 36 513 1.10e-50 180
Msa1406130 MtrunA17_Chr5g0431401 27.557 479 293 13 10 474 10 448 1.19e-50 178
Msa1406130 MtrunA17_Chr5g0431371 28.631 482 284 14 10 474 10 448 1.47e-50 178
Msa1406130 MtrunA17_Chr7g0265141 29.142 501 297 13 10 475 9 486 2.49e-50 178
Msa1406130 MtrunA17_Chr8g0377941 29.918 488 284 18 12 475 9 462 5.63e-50 177
Msa1406130 MtrunA17_Chr8g0366391 29.675 492 296 17 10 474 9 477 6.44e-50 177
Msa1406130 MtrunA17_Chr5g0448551 28.000 425 281 9 7 429 4 405 1.18e-49 176
Msa1406130 MtrunA17_Chr5g0431421 27.950 483 288 13 10 475 10 449 4.60e-49 174
Msa1406130 MtrunA17_Chr7g0265051 27.397 511 300 17 8 477 7 487 7.73e-49 175
Msa1406130 MtrunA17_Chr7g0232401 27.835 485 295 12 7 465 3 458 8.57e-49 174
Msa1406130 MtrunA17_Chr4g0072761 28.298 470 300 10 10 474 15 452 1.11e-48 173
Msa1406130 MtrunA17_Chr1g0173121 27.310 487 290 15 12 474 16 462 1.51e-48 173
Msa1406130 MtrunA17_Chr4g0072771 27.637 474 307 11 7 474 22 465 1.58e-48 173
Msa1406130 MtrunA17_Chr4g0014061 28.659 492 284 15 13 471 12 469 1.59e-48 173
Msa1406130 MtrunA17_Chr8g0373301 30.713 407 228 14 70 450 64 442 7.80e-48 171
Msa1406130 MtrunA17_Chr6g0462571 28.857 350 216 8 136 470 126 457 6.15e-47 169
Msa1406130 MtrunA17_Chr3g0106231 28.157 483 282 14 10 475 18 452 6.45e-47 169
Msa1406130 MtrunA17_Chr7g0232311 32.123 358 205 10 134 471 121 460 6.62e-47 169
Msa1406130 MtrunA17_Chr7g0243871 28.287 502 293 21 6 474 5 472 6.97e-47 169
Msa1406130 MtrunA17_Chr7g0243781 25.956 497 306 16 10 474 9 475 6.97e-47 169
Msa1406130 MtrunA17_Chr6g0449931 28.953 487 289 15 8 467 4 460 7.13e-47 169
Msa1406130 MtrunA17_Chr6g0462541 30.294 340 200 10 148 470 140 459 1.53e-46 168
Msa1406130 MtrunA17_Chr6g0462531 29.508 366 225 9 122 472 115 462 1.73e-46 167
Msa1406130 MtrunA17_Chr5g0440421 28.155 515 309 23 1 475 1 494 2.03e-46 168
Msa1406130 MtrunA17_Chr5g0401851 28.713 505 293 18 8 474 8 483 3.22e-46 167
Msa1406130 MtrunA17_Chr7g0232391 26.892 502 292 15 7 473 3 464 3.51e-46 167
Msa1406130 MtrunA17_Chr1g0165701 27.921 505 286 17 11 474 16 483 4.08e-46 167
Msa1406130 MtrunA17_Chr1g0159551 27.273 484 285 17 15 474 19 459 4.90e-46 166
Msa1406130 MtrunA17_Chr7g0243851 27.711 498 269 15 6 474 7 442 4.94e-46 166
Msa1406130 MtrunA17_Chr7g0249961 38.462 234 134 5 239 467 24 252 5.54e-46 161
Msa1406130 MtrunA17_Chr4g0044501 28.016 489 305 14 10 474 10 475 1.02e-45 166
Msa1406130 MtrunA17_Chr4g0066221 27.291 491 304 16 13 474 14 480 1.37e-45 166
Msa1406130 MtrunA17_Chr7g0232411 27.146 501 292 18 7 473 3 464 1.41e-45 165
Msa1406130 MtrunA17_Chr7g0235051 27.163 497 274 15 10 473 11 452 2.75e-45 164
Msa1406130 MtrunA17_Chr8g0336691 30.319 376 215 9 121 470 1021 1375 5.13e-45 169
Msa1406130 MtrunA17_Chr8g0336691 27.273 517 286 15 2 477 5 472 9.23e-42 159
Msa1406130 MtrunA17_Chr8g0336691 26.978 493 280 16 7 477 477 911 8.44e-37 144
Msa1406130 MtrunA17_Chr8g0339631 30.352 369 219 11 121 467 109 461 9.02e-45 163
Msa1406130 MtrunA17_Chr8g0355221 26.721 494 309 15 11 474 16 486 9.51e-45 164
Msa1406130 MtrunA17_Chr8g0347281 28.794 514 262 16 9 477 17 471 1.08e-44 163
Msa1406130 MtrunA17_Chr6g0463851 26.253 499 309 15 13 479 14 485 1.41e-44 163
Msa1406130 MtrunA17_Chr5g0420801 28.571 483 298 15 6 471 3 455 1.43e-44 162
Msa1406130 MtrunA17_Chr8g0336651 29.077 509 279 18 7 477 778 1242 1.86e-44 167
Msa1406130 MtrunA17_Chr8g0336651 27.634 503 284 18 5 470 1 460 1.35e-41 159
Msa1406130 MtrunA17_Chr8g0336651 33.459 266 136 6 220 477 541 773 6.88e-34 136
Msa1406130 MtrunA17_Chr5g0428081 27.551 490 303 14 13 474 14 479 1.94e-44 162
Msa1406130 MtrunA17_Chr8g0347271 28.893 488 295 14 9 477 18 472 2.26e-44 162
Msa1406130 MtrunA17_Chr7g0275511 28.601 486 281 17 9 463 14 464 2.30e-44 162
Msa1406130 MtrunA17_Chr1g0153451 30.273 403 216 13 107 477 93 462 3.93e-44 161
Msa1406130 MtrunA17_Chr8g0335161 33.115 305 171 10 186 470 171 462 5.18e-44 161
Msa1406130 MtrunA17_Chr2g0294931 26.884 491 307 14 13 474 14 481 9.16e-44 160
Msa1406130 MtrunA17_Chr5g0432731 32.692 312 174 9 180 475 6 297 1.15e-43 155
Msa1406130 MtrunA17_Chr5g0416821 28.337 487 296 16 12 474 16 473 1.22e-43 160
Msa1406130 MtrunA17_Chr8g0336741 28.243 478 273 16 8 453 11 450 1.25e-43 160
Msa1406130 MtrunA17_Chr6g0463891 27.163 497 302 15 12 474 14 484 1.87e-43 160
Msa1406130 MtrunA17_Chr6g0459311 32.237 304 174 8 186 470 177 467 1.96e-43 159
Msa1406130 MtrunA17_Chr6g0462521 33.108 296 168 8 192 472 168 448 2.18e-43 159
Msa1406130 MtrunA17_Chr6g0462551 26.775 493 289 16 12 470 6 460 3.13e-43 159
Msa1406130 MtrunA17_Chr8g0339461 31.025 361 202 12 121 453 109 450 4.54e-43 158
Msa1406130 MtrunA17_Chr7g0243761 26.789 489 289 15 10 474 11 454 5.42e-43 158
Msa1406130 MtrunA17_Chr5g0427561 75.000 88 22 0 391 478 1 88 1.16e-42 146
Msa1406130 MtrunA17_Chr2g0294921 28.367 490 301 16 13 474 163 630 1.70e-42 159
Msa1406130 MtrunA17_Chr4g0066131 27.254 488 294 14 13 471 16 471 1.80e-42 157
Msa1406130 MtrunA17_Chr8g0370941 26.744 516 294 16 7 472 5 486 3.11e-42 157
Msa1406130 MtrunA17_Chr8g0339451 30.641 359 206 10 121 453 101 442 3.49e-42 156
Msa1406130 MtrunA17_Chr4g0066151 27.254 488 300 13 13 474 21 479 6.54e-42 155
Msa1406130 MtrunA17_Chr8g0374931 27.181 493 303 14 13 474 14 481 9.23e-42 155
Msa1406130 MtrunA17_Chr8g0336731 29.737 380 212 11 121 471 134 487 1.49e-41 155
Msa1406130 MtrunA17_Chr6g0486251 27.216 485 295 16 12 470 8 460 1.65e-41 154
Msa1406130 MtrunA17_Chr6g0486201 27.216 485 295 16 12 470 8 460 1.65e-41 154
Msa1406130 MtrunA17_Chr5g0410941 27.403 489 303 14 13 474 26 489 2.94e-41 154
Msa1406130 MtrunA17_Chr5g0416741 26.506 498 302 13 12 474 15 483 3.08e-41 154
Msa1406130 MtrunA17_Chr8g0369341 27.686 484 313 12 6 472 3 466 3.88e-41 153
Msa1406130 MtrunA17_Chr4g0066261 27.689 502 289 16 13 474 14 481 1.32e-40 152
Msa1406130 MtrunA17_Chr4g0066281 28.715 498 281 18 13 478 15 470 2.35e-40 151
Msa1406130 MtrunA17_Chr8g0382021 32.482 274 156 7 221 474 224 488 4.59e-40 150
Msa1406130 MtrunA17_Chr8g0361371 25.911 494 307 15 7 471 4 467 5.11e-40 150
Msa1406130 MtrunA17_Chr2g0329111 26.719 509 294 17 7 471 3 476 1.07e-39 149
Msa1406130 MtrunA17_Chr7g0218311 26.572 493 303 14 13 474 19 483 1.71e-39 149
Msa1406130 MtrunA17_Chr5g0429711 28.189 486 303 16 5 474 6 461 1.82e-39 148
Msa1406130 MtrunA17_Chr4g0066201 28.513 491 285 19 13 474 21 474 1.84e-39 149
Msa1406130 MtrunA17_Chr8g0339601 32.313 294 160 8 186 453 29 309 2.68e-39 145
Msa1406130 MtrunA17_Chr8g0334851 29.773 309 172 9 177 453 153 448 2.92e-39 148
Msa1406130 MtrunA17_Chr7g0265111 25.845 503 311 15 10 475 39 516 3.95e-39 149
Msa1406130 MtrunA17_Chr6g0463861 26.104 498 304 17 13 479 14 478 1.24e-38 146
Msa1406130 MtrunA17_Chr7g0232331 25.941 505 295 19 7 470 3 469 2.84e-38 145
Msa1406130 MtrunA17_Chr7g0232341 24.554 505 290 17 7 465 3 462 3.30e-38 145
Msa1406130 MtrunA17_Chr3g0079731 25.813 492 313 12 12 472 8 478 6.91e-38 144
Msa1406130 MtrunA17_Chr2g0294941 29.167 360 211 12 124 455 17 360 1.58e-37 141
Msa1406130 MtrunA17_Chr5g0431431 31.373 306 183 8 141 440 69 353 2.51e-37 140
Msa1406130 MtrunA17_Chr5g0442601 26.654 514 294 20 7 475 401 876 3.39e-37 145
Msa1406130 MtrunA17_Chr5g0442601 26.000 350 200 9 81 412 27 335 2.91e-26 112
Msa1406130 MtrunA17_Chr5g0442561 25.000 508 306 18 7 475 2 473 3.56e-37 142
Msa1406130 MtrunA17_Chr1g0153461 36.715 207 114 4 281 470 2 208 1.79e-36 134
Msa1406130 MtrunA17_Chr8g0339441 38.021 192 99 4 282 453 217 408 2.12e-36 139
Msa1406130 MtrunA17_Chr5g0403641 31.104 299 163 8 209 476 218 504 3.61e-36 140
Msa1406130 MtrunA17_Chr4g0044521 30.159 315 174 11 192 472 162 464 4.41e-36 139
Msa1406130 MtrunA17_Chr8g0374971 25.304 494 309 12 13 474 15 480 6.56e-36 139
Msa1406130 MtrunA17_Chr5g0448521 24.900 502 309 16 7 475 2 468 7.60e-36 138
Msa1406130 MtrunA17_Chr8g0334861 28.205 312 185 8 186 473 166 462 8.26e-36 138
Msa1406130 MtrunA17_Chr4g0042931 26.667 495 293 18 10 473 7 462 8.74e-36 138
Msa1406130 MtrunA17_Chr5g0442581 25.049 515 301 15 7 475 2 477 1.49e-35 139
Msa1406130 MtrunA17_Chr8g0374901 24.850 499 303 17 13 474 15 478 2.08e-35 137
Msa1406130 MtrunA17_Chr2g0307961 26.489 487 317 15 6 476 9 470 2.63e-35 137
Msa1406130 MtrunA17_Chr4g0044481 27.423 423 242 16 10 417 27 399 4.79e-35 135
Msa1406130 MtrunA17_Chr4g0042891 31.698 265 152 7 226 473 212 464 4.98e-35 136
Msa1406130 MtrunA17_Chr5g0442541 24.950 505 303 17 7 475 2 466 7.23e-35 135
Msa1406130 MtrunA17_Chr8g0334831 25.873 487 286 17 5 450 1 453 7.96e-35 135
Msa1406130 MtrunA17_Chr3g0106251 29.703 303 184 7 183 475 11 294 1.73e-34 131
Msa1406130 MtrunA17_Chr5g0442521 23.611 504 313 18 7 471 2 472 2.17e-34 134
Msa1406130 MtrunA17_Chr7g0243711 33.740 246 143 7 247 474 73 316 2.37e-34 131
Msa1406130 MtrunA17_Chr4g0066171 27.856 499 299 18 2 474 13 476 7.15e-34 133
Msa1406130 MtrunA17_Chr7g0243611 34.483 232 139 8 197 421 52 277 2.07e-33 128
Msa1406130 MtrunA17_Chr8g0350881 24.641 487 323 10 12 474 14 480 2.35e-33 132
Msa1406130 MtrunA17_Chr5g0429681 29.223 373 214 12 122 471 151 496 4.57e-33 131
Msa1406130 MtrunA17_Chr5g0442491 23.518 506 318 15 7 475 2 475 5.20e-33 130
Msa1406130 MtrunA17_Chr8g0374941 25.651 499 301 15 13 474 952 1417 5.93e-33 133
Msa1406130 MtrunA17_Chr8g0374941 25.052 479 291 14 13 455 14 460 9.21e-32 129
Msa1406130 MtrunA17_Chr8g0374941 24.948 481 289 18 13 455 479 925 1.50e-31 129
Msa1406130 MtrunA17_Chr8g0336321 26.653 484 298 17 10 471 7 455 9.06e-33 130
Msa1406130 MtrunA17_Chr2g0302991 27.778 378 223 11 122 474 110 462 3.33e-32 128
Msa1406130 MtrunA17_Chr7g0243911 35.979 189 104 3 278 449 17 205 9.06e-32 121
Msa1406130 MtrunA17_Chr8g0336251 26.446 484 299 17 10 471 7 455 1.23e-31 126
Msa1406130 MtrunA17_Chr7g0243811 24.638 414 265 12 22 421 1 381 5.59e-31 123
Msa1406130 MtrunA17_Chr2g0302961 26.632 383 217 13 122 474 117 465 4.71e-30 122
Msa1406130 MtrunA17_Chr5g0442511 23.413 504 288 20 7 471 46 490 5.45e-30 122
Msa1406130 MtrunA17_Chr1g0207881 40.310 129 71 1 352 474 256 384 2.40e-29 119
Msa1406130 MtrunA17_Chr2g0278721 27.253 466 297 18 6 452 513 955 8.05e-29 120
Msa1406130 MtrunA17_Chr2g0278721 32.948 173 107 4 285 451 274 443 6.35e-21 96.7
Msa1406130 MtrunA17_Chr8g0361411 26.955 486 298 20 8 474 6 453 1.34e-28 117
Msa1406130 MtrunA17_Chr7g0231631 31.746 252 164 5 228 474 11 259 6.21e-28 112
Msa1406130 MtrunA17_Chr5g0409591 31.439 264 141 9 219 454 205 456 8.24e-28 115
Msa1406130 MtrunA17_Chr6g0466831 26.850 473 292 18 1 451 1 441 2.29e-27 114
Msa1406130 MtrunA17_Chr6g0482061 25.000 500 307 19 10 473 11 478 2.47e-27 114
Msa1406130 MtrunA17_Chr7g0232351 32.075 212 117 6 196 392 179 378 3.93e-27 112
Msa1406130 MtrunA17_Chr7g0241801 35.838 173 100 5 283 451 241 406 4.35e-27 113
Msa1406130 MtrunA17_Chr7g0241781 36.416 173 99 5 283 451 241 406 4.43e-27 113
Msa1406130 MtrunA17_Chr5g0427571 32.432 259 153 8 224 471 42 289 7.11e-27 110
Msa1406130 MtrunA17_Chr3g0079711 33.514 185 101 5 309 472 3 186 1.31e-26 106
Msa1406130 MtrunA17_Chr6g0466841 25.895 475 294 19 1 451 1 441 2.64e-26 111
Msa1406130 MtrunA17_Chr7g0250021 27.439 328 213 9 4 329 6 310 5.01e-26 108
Msa1406130 MtrunA17_Chr6g0454391 67.692 65 21 0 367 431 11 75 6.32e-26 102
Msa1406130 MtrunA17_Chr4g0069611 24.946 461 299 16 6 451 10 438 1.01e-25 109
Msa1406130 MtrunA17_Chr6g0464091 25.431 464 304 15 4 451 11 448 1.30e-25 109
Msa1406130 MtrunA17_Chr3g0092031 33.333 177 109 4 281 451 2 175 1.41e-25 103
Msa1406130 MtrunA17_Chr8g0367221 26.190 462 297 15 7 450 1285 1720 3.39e-25 109
Msa1406130 MtrunA17_Chr8g0367221 26.767 467 287 19 7 450 9 443 7.17e-25 108
Msa1406130 MtrunA17_Chr8g0367221 34.831 178 101 5 284 450 1057 1230 3.10e-20 94.7
Msa1406130 MtrunA17_Chr8g0357361 34.146 205 118 7 220 417 57 251 7.58e-23 97.8
Msa1406130 MtrunA17_Chr4g0040691 27.239 268 174 8 220 478 206 461 4.92e-21 95.5
Msa1406130 MtrunA17_Chr8g0337381 41.085 129 66 3 353 477 2 124 7.59e-21 88.6
Msa1406130 MtrunA17_Chr3g0118741 57.627 59 25 0 5 63 1 59 2.61e-20 85.1
Msa1406130 MtrunA17_Chr4g0029131 21.895 475 300 16 4 451 6 436 2.69e-20 94.4
Msa1406130 MtrunA17_Chr2g0302851 31.111 180 111 4 280 451 265 439 2.86e-20 93.2
Msa1406130 MtrunA17_Chr4g0039881 27.347 245 163 7 214 451 179 415 3.35e-20 92.8
Msa1406130 MtrunA17_Chr1g0196851 27.200 250 155 8 216 451 240 476 9.06e-20 92.0
Msa1406130 MtrunA17_Chr2g0278741 32.000 175 106 4 285 451 356 525 9.74e-20 92.0
Msa1406130 MtrunA17_Chr4g0066141 35.811 148 78 4 344 474 204 351 1.23e-19 90.5
Msa1406130 MtrunA17_Chr4g0040711 27.869 244 150 8 220 451 206 435 4.52e-18 86.7
Msa1406130 MtrunA17_Chr4g0029151 22.458 472 301 18 4 451 14 444 8.62e-18 85.9
Msa1406130 MtrunA17_Chr2g0319761 25.055 455 301 14 10 451 8 435 1.01e-15 79.3
Msa1406130 MtrunA17_Chr2g0283041 25.620 242 145 7 220 445 205 427 2.99e-15 77.8
Msa1406130 MtrunA17_Chr8g0334841 29.240 171 104 4 186 352 1 158 5.78e-15 72.8
Msa1406130 MtrunA17_Chr1g0207911 25.758 264 161 11 12 263 10 250 9.36e-15 74.3
Msa1406130 MtrunA17_Chr2g0319791 22.128 470 318 12 10 462 8 446 7.05e-14 73.6
Msa1406130 MtrunA17_Chr6g0454241 73.171 41 11 0 434 474 1 41 7.58e-14 67.0
Msa1406130 MtrunA17_Chr7g0243731 38.889 72 44 0 346 417 2 73 9.63e-14 66.6
Msa1406130 MtrunA17_Chr2g0319751 24.301 465 290 16 10 450 485 911 3.67e-13 72.0
Msa1406130 MtrunA17_Chr7g0267931 72.973 37 9 1 15 50 25 61 3.72e-13 64.3
Msa1406130 MtrunA17_Chr3g0118731 32.743 113 71 2 62 174 28 135 3.44e-12 64.7
Msa1406130 MtrunA17_Chr7g0243721 33.333 111 73 1 219 328 25 135 6.41e-12 63.2
Msa1406130 MtrunA17_Chr6g0469961 29.932 147 86 4 186 325 28 164 3.90e-11 61.6
Msa1406130 MtrunA17_Chr6g0454311 65.000 40 14 0 178 217 13 52 8.17e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406130 AT1G22380.1 51.667 480 219 5 7 478 10 484 0.0 520
Msa1406130 AT1G22340.1 51.540 487 220 7 2 477 3 484 0.0 516
Msa1406130 AT1G22400.1 50.830 482 223 5 6 478 9 485 2.32e-180 514
Msa1406130 AT1G22370.2 53.066 473 214 4 7 476 10 477 9.49e-177 504
Msa1406130 AT1G22360.1 51.240 484 223 5 1 476 1 479 1.28e-176 504
Msa1406130 AT1G22360.2 49.587 484 219 6 1 476 1 467 2.01e-167 481
Msa1406130 AT1G78270.1 46.862 478 241 6 6 475 9 481 1.67e-163 471
Msa1406130 AT1G22370.1 52.303 304 142 2 176 476 4 307 1.69e-107 322
Msa1406130 AT5G59590.1 37.474 475 252 14 7 471 7 446 4.73e-93 290
Msa1406130 AT5G59580.1 37.137 482 257 13 8 479 7 452 6.12e-91 284
Msa1406130 AT3G11340.1 34.395 471 274 9 8 475 7 445 1.11e-87 276
Msa1406130 AT3G46660.1 37.288 472 249 13 12 471 16 452 3.63e-87 275
Msa1406130 AT3G46670.1 35.470 468 265 11 10 471 9 445 4.42e-86 272
Msa1406130 AT3G46700.1 34.874 476 265 12 7 474 6 444 8.53e-86 271
Msa1406130 AT5G05860.1 34.746 472 272 12 10 476 9 449 2.26e-82 262
Msa1406130 AT5G05900.1 34.115 469 270 12 10 471 8 444 1.05e-81 260
Msa1406130 AT5G05880.1 34.335 466 274 11 10 471 8 445 3.36e-81 259
Msa1406130 AT3G46680.1 34.100 478 269 13 5 471 4 446 8.06e-81 258
Msa1406130 AT3G46690.1 35.032 471 272 11 7 472 6 447 1.97e-80 257
Msa1406130 AT3G46650.1 33.544 474 263 12 1 469 1 427 3.36e-80 256
Msa1406130 AT5G38040.1 35.054 465 255 13 19 472 19 447 2.25e-79 254
Msa1406130 AT5G05890.1 34.672 473 267 12 10 471 8 449 3.42e-79 254
Msa1406130 AT3G55700.1 33.612 479 278 15 6 475 4 451 1.71e-78 252
Msa1406130 AT5G05870.1 34.681 470 279 11 10 474 8 454 9.59e-78 250
Msa1406130 AT5G38010.1 34.100 478 272 10 6 472 6 451 1.07e-77 250
Msa1406130 AT3G46720.1 34.672 473 260 13 7 471 6 437 2.44e-75 244
Msa1406130 AT4G15480.1 30.722 485 291 11 10 474 19 478 1.02e-74 243
Msa1406130 AT2G36970.1 30.754 491 302 13 1 474 1 470 1.30e-74 243
Msa1406130 AT4G15490.1 30.488 492 296 14 6 477 4 469 4.82e-74 241
Msa1406130 AT3G02100.1 32.135 473 285 11 8 471 11 456 2.01e-73 239
Msa1406130 AT2G26480.1 30.417 480 289 11 7 477 5 448 3.95e-73 238
Msa1406130 AT3G21560.1 30.675 489 295 11 9 477 11 475 1.77e-72 238
Msa1406130 AT4G15500.1 29.876 482 297 10 9 475 8 463 1.35e-71 235
Msa1406130 AT2G28080.1 32.347 473 291 13 14 477 22 474 1.33e-68 227
Msa1406130 AT3G55710.1 32.577 485 279 18 6 475 4 455 1.16e-67 224
Msa1406130 AT1G05680.1 32.059 471 284 12 10 473 6 447 2.51e-67 223
Msa1406130 AT2G31790.1 31.224 474 292 11 7 471 5 453 1.96e-66 221
Msa1406130 AT2G31750.1 30.290 482 290 15 8 475 6 455 8.00e-65 216
Msa1406130 AT2G31750.2 30.290 482 290 15 8 475 6 455 1.57e-64 216
Msa1406130 AT1G05675.1 31.078 473 286 13 10 471 6 449 5.86e-64 214
Msa1406130 AT2G43820.1 31.020 490 277 18 6 477 3 449 6.43e-64 214
Msa1406130 AT2G43840.2 30.769 481 286 15 8 477 5 449 5.93e-63 211
Msa1406130 AT2G43840.1 30.561 481 287 15 8 477 5 449 9.82e-62 208
Msa1406130 AT4G01070.1 32.389 494 270 15 6 467 4 465 1.02e-59 204
Msa1406130 AT2G23250.1 30.064 469 287 14 13 474 1 435 1.56e-59 202
Msa1406130 AT5G17050.1 28.157 483 301 11 6 475 8 457 1.98e-59 202
Msa1406130 AT2G36770.1 27.961 515 299 15 2 475 6 489 7.92e-59 202
Msa1406130 AT4G34131.1 29.423 503 300 16 1 473 1 478 2.59e-57 197
Msa1406130 AT2G36750.1 29.783 507 283 16 10 475 10 484 1.18e-56 196
Msa1406130 AT2G15480.1 28.715 498 321 11 1 478 1 484 1.45e-56 195
Msa1406130 AT3G53160.1 29.234 496 301 15 10 475 8 483 2.13e-56 195
Msa1406130 AT2G36800.1 30.040 506 285 17 10 475 12 488 2.66e-56 195
Msa1406130 AT5G17040.1 26.625 477 298 9 10 475 5 440 2.81e-56 193
Msa1406130 AT2G23260.1 29.645 479 298 14 7 476 7 455 2.83e-56 194
Msa1406130 AT2G36780.1 28.656 506 291 15 10 475 14 489 6.35e-56 194
Msa1406130 AT2G15480.2 28.543 508 319 13 1 478 1 494 3.31e-55 192
Msa1406130 AT2G36760.1 28.767 511 284 17 10 475 14 489 3.94e-55 192
Msa1406130 AT5G66690.1 27.968 497 292 14 8 473 5 466 7.42e-55 191
Msa1406130 AT2G30140.1 28.958 480 293 13 6 474 9 451 9.74e-55 190
Msa1406130 AT4G15550.1 29.303 488 295 14 9 473 12 472 1.10e-54 190
Msa1406130 AT2G30140.2 28.750 480 293 13 6 474 9 450 1.89e-54 189
Msa1406130 AT5G17030.1 26.427 473 321 8 6 475 8 456 1.92e-54 189
Msa1406130 AT2G36790.1 31.746 504 299 16 1 475 1 488 1.19e-53 188
Msa1406130 AT5G26310.1 27.400 500 291 14 8 473 5 466 1.92e-53 187
Msa1406130 AT5G17040.2 30.368 326 198 5 159 475 33 338 2.12e-53 183
Msa1406130 AT2G15490.3 29.243 489 312 12 10 478 7 481 3.81e-53 186
Msa1406130 AT2G15490.1 29.065 492 312 12 10 478 7 484 1.11e-52 185
Msa1406130 AT3G53150.1 27.898 509 310 15 7 475 19 510 1.42e-52 185
Msa1406130 AT1G05560.1 28.049 492 284 19 9 474 4 451 1.93e-52 184
Msa1406130 AT1G05560.2 28.049 492 284 19 9 474 54 501 2.27e-52 185
Msa1406130 AT1G30530.1 28.632 475 292 14 11 475 14 451 3.85e-52 183
Msa1406130 AT1G05530.1 27.767 497 286 15 8 475 3 455 1.75e-51 181
Msa1406130 AT2G30150.2 28.189 486 282 12 10 474 13 452 3.68e-51 180
Msa1406130 AT4G34138.1 27.875 513 289 16 8 478 9 482 8.64e-50 177
Msa1406130 AT2G30150.1 28.008 482 280 12 14 474 1 436 1.18e-49 176
Msa1406130 AT1G01420.1 29.472 492 281 14 9 470 7 462 1.58e-49 176
Msa1406130 AT1G01420.2 29.472 492 281 14 9 470 10 465 1.69e-49 176
Msa1406130 AT4G14090.1 28.454 485 291 18 6 473 9 454 6.02e-49 174
Msa1406130 AT1G24100.1 28.367 490 288 14 8 474 9 458 1.65e-48 173
Msa1406130 AT5G14860.1 29.779 497 298 18 5 474 3 475 1.21e-47 172
Msa1406130 AT4G34135.1 28.261 460 278 16 6 436 7 443 1.83e-46 168
Msa1406130 AT3G22250.1 28.294 463 288 13 5 447 3 441 3.93e-46 167
Msa1406130 AT3G50740.1 27.381 504 292 18 8 473 5 472 6.34e-46 167
Msa1406130 AT3G16520.3 30.220 364 222 13 122 472 113 457 6.32e-45 164
Msa1406130 AT1G10400.1 27.273 484 309 14 7 473 4 461 6.93e-45 164
Msa1406130 AT3G16520.1 30.532 357 212 13 122 463 113 448 8.32e-44 160
Msa1406130 AT3G16520.2 30.925 346 207 13 122 454 113 439 1.44e-43 159
Msa1406130 AT5G37950.1 30.214 374 224 11 25 392 1 343 3.92e-43 156
Msa1406130 AT1G01390.1 29.472 492 292 19 9 477 7 466 1.38e-42 157
Msa1406130 AT1G01390.2 29.472 492 292 19 9 477 24 483 1.85e-42 157
Msa1406130 AT2G16890.2 27.621 496 291 17 10 474 9 467 7.71e-42 155
Msa1406130 AT5G37950.2 29.491 373 222 10 25 392 1 337 9.49e-42 152
Msa1406130 AT5G03490.1 28.157 483 296 18 6 473 15 461 1.94e-41 154
Msa1406130 AT1G73880.1 28.112 498 293 19 6 475 7 467 3.09e-41 154
Msa1406130 AT4G36770.1 28.099 484 277 16 10 460 4 449 1.61e-40 151
Msa1406130 AT2G29710.1 26.061 495 307 17 7 475 2 463 5.65e-39 147
Msa1406130 AT2G18560.1 27.525 396 225 15 105 467 3 369 1.08e-37 142
Msa1406130 AT3G21790.1 27.364 497 303 15 12 474 6 478 1.12e-37 144
Msa1406130 AT3G21800.1 27.000 500 297 16 12 474 7 475 1.32e-37 144
Msa1406130 AT4G15280.1 26.761 497 303 15 12 475 6 474 5.01e-37 142
Msa1406130 AT4G15280.2 26.761 497 303 15 12 475 38 506 6.71e-37 142
Msa1406130 AT3G21750.1 26.400 500 304 14 8 475 2 469 1.04e-36 141
Msa1406130 AT4G15260.1 29.076 368 215 11 135 475 7 355 3.40e-36 137
Msa1406130 AT2G18570.1 25.852 499 289 21 8 467 3 459 3.59e-36 139
Msa1406130 AT2G29730.1 26.283 487 306 16 12 475 7 463 2.14e-35 137
Msa1406130 AT1G51210.1 27.851 456 274 18 8 449 18 432 4.08e-34 133
Msa1406130 AT3G21760.1 25.304 494 319 12 12 474 6 480 4.29e-34 134
Msa1406130 AT3G21780.1 27.600 500 296 18 8 474 2 468 5.55e-34 134
Msa1406130 AT2G29740.1 26.327 490 315 14 6 471 4 471 1.21e-33 132
Msa1406130 AT1G07250.1 30.576 278 168 7 212 475 207 473 5.37e-33 131
Msa1406130 AT5G65550.1 25.821 457 304 13 8 452 7 440 1.02e-32 130
Msa1406130 AT2G29750.1 26.069 491 310 16 12 475 10 474 3.47e-32 129
Msa1406130 AT1G07260.1 27.151 372 234 9 122 475 120 472 3.64e-32 128
Msa1406130 AT2G16890.3 26.559 433 258 15 10 419 9 404 5.31e-32 127
Msa1406130 AT5G12890.1 25.703 498 315 19 12 478 12 485 1.06e-30 124
Msa1406130 AT5G49690.1 25.821 457 288 17 10 450 10 431 5.51e-30 122
Msa1406130 AT1G07240.1 27.698 278 176 7 214 475 208 476 3.82e-29 120
Msa1406130 AT1G06000.1 25.200 500 285 14 1 476 1 435 1.49e-27 115
Msa1406130 AT4G01070.2 31.138 334 188 10 6 329 4 305 5.42e-27 112
Msa1406130 AT2G22590.1 25.482 467 291 15 8 450 13 446 8.75e-25 107
Msa1406130 AT4G34135.2 27.485 342 208 13 6 329 7 326 1.33e-22 99.0
Msa1406130 AT4G27570.1 29.070 172 112 4 279 446 244 409 1.06e-18 89.0
Msa1406130 AT2G22930.1 23.077 481 305 13 10 474 6 437 2.00e-18 87.8
Msa1406130 AT4G27560.1 31.469 143 92 3 279 417 244 384 4.76e-18 87.0
Msa1406130 AT5G54010.1 23.016 504 306 21 5 477 1 453 3.99e-17 84.0
Msa1406130 AT5G54060.1 26.957 460 273 21 12 445 15 437 5.33e-17 83.6
Msa1406130 AT1G64910.1 22.718 471 297 18 10 461 6 428 1.08e-16 82.8
Msa1406130 AT3G29630.2 34.247 146 86 4 285 426 220 359 5.93e-16 80.1
Msa1406130 AT3G29630.1 34.247 146 86 4 285 426 246 385 6.14e-16 80.5
Msa1406130 AT5G53990.1 30.822 146 91 4 285 426 244 383 8.45e-16 80.1
Msa1406130 AT4G09500.1 29.213 178 114 5 284 451 218 393 9.66e-16 79.7
Msa1406130 AT2G23210.1 24.585 301 188 10 1 294 1 269 1.14e-15 77.8
Msa1406130 AT4G09500.2 29.213 178 114 5 284 451 243 418 1.14e-15 79.3
Msa1406130 AT1G64920.1 27.322 183 118 6 284 458 243 418 1.06e-12 70.5
Msa1406130 AT1G50580.1 29.452 146 91 4 285 425 245 383 7.55e-12 67.8

Find 103 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAATTTCTTCATATTAA+AGG 0.103997 tig0023193:+39885 Msa1406130:CDS
CATATATATCTACAGTTTAT+TGG 0.144722 tig0023193:-41475 None:intergenic
CATCTTTAGGTTCAAATCTT+TGG 0.169174 tig0023193:+41080 Msa1406130:CDS
TTCAATGACAAATTCTAAAA+TGG 0.170437 tig0023193:-40900 None:intergenic
TGCTTTCTTCTTTAACTCTA+TGG 0.182357 tig0023193:-41611 None:intergenic
AGGATCTACCTGACGTAATA+AGG 0.252720 tig0023193:+40858 Msa1406130:CDS
GTAGATATATATGCAATATA+TGG 0.270450 tig0023193:+41485 Msa1406130:CDS
GAACTTGGACAAGGTTATTA+AGG 0.278762 tig0023193:+41669 Msa1406130:CDS
CATAGTAACTTGGCATCTTT+AGG 0.280176 tig0023193:+41067 Msa1406130:CDS
AGGCCTAATGATCCACAAAA+AGG 0.291358 tig0023193:-41242 None:intergenic
TCAGCAACTTGTATGGTAAA+TGG 0.305820 tig0023193:-40194 None:intergenic
ATATGCCCTTGAAGAGGATA+TGG 0.330531 tig0023193:-39843 None:intergenic
ACCGTTGAAAGCGTACTTGC+TGG 0.374267 tig0023193:+41415 Msa1406130:CDS
AATCGAAAGTTCTGCAATCC+TGG 0.387425 tig0023193:-40833 None:intergenic
GTTGGTGAAAAGAGAAGGAT+TGG 0.388786 tig0023193:-40230 None:intergenic
AGCAACTATTAGAGTTTGCT+TGG 0.402899 tig0023193:+41197 Msa1406130:CDS
ATTAGAGTTTGCTTGGGGTC+TGG 0.403368 tig0023193:+41204 Msa1406130:CDS
AAACTCAGATGACATAATAA+AGG 0.403710 tig0023193:-41284 None:intergenic
TCTGTTGTTTATGTGAGTTT+TGG 0.408759 tig0023193:+41151 Msa1406130:CDS
AGAGGTTCTAATTCTCTTGA+TGG 0.408792 tig0023193:+39963 Msa1406130:CDS
TTGATTCCATATCCTCTTCA+AGG 0.418412 tig0023193:+39837 Msa1406130:CDS
GCCAAAGTAGACTGTATTCC+AGG 0.422994 tig0023193:+40815 Msa1406130:CDS
GCAACTATTAGAGTTTGCTT+GGG 0.431882 tig0023193:+41198 Msa1406130:CDS
ATTGCAGAACTTTCGATTGA+AGG 0.433558 tig0023193:+40838 Msa1406130:CDS
TTCCCTTCATTATATACCAT+TGG 0.440869 tig0023193:+41013 Msa1406130:CDS
GTATGAACAACCACTGATAC+TGG 0.450131 tig0023193:-41644 None:intergenic
CCATTGGAGTTAGACCATCT+TGG 0.451949 tig0023193:-40013 None:intergenic
ATTCTCTTCAGCAACTTGTA+TGG 0.457568 tig0023193:-40201 None:intergenic
ATTAGGCCTGATCTTGTCAT+TGG 0.460027 tig0023193:+41256 Msa1406130:CDS
GGTCCAATGGTATATAATGA+AGG 0.464084 tig0023193:-41016 None:intergenic
GTATTGAACCACCCTTCAAT+TGG 0.464768 tig0023193:+41361 Msa1406130:CDS
GAGCCGCCAATGACAAGATC+AGG 0.465836 tig0023193:-41262 None:intergenic
TCAATGACAAATTCTAAAAT+GGG 0.466000 tig0023193:-40899 None:intergenic
AAGAACTTCATCAAACCCTT+TGG 0.468245 tig0023193:+40089 Msa1406130:CDS
GAATTGATGGTGGGAGGTAA+AGG 0.468970 tig0023193:+41568 Msa1406130:CDS
TGTCAAACATTGTACGAAAG+TGG 0.469912 tig0023193:-40280 None:intergenic
GCAAACTCTAATAGTTGCTC+TGG 0.475575 tig0023193:-41193 None:intergenic
TAGATATATATGCAATATAT+GGG 0.477765 tig0023193:+41486 Msa1406130:CDS
TCAGAAACTAAGCAAGTAAC+CGG 0.479562 tig0023193:-40161 None:intergenic
GAAACTGATCAATGAATTGA+TGG 0.481841 tig0023193:+41555 Msa1406130:CDS
TCTTGAATGGCTTGAATCAA+AGG 0.484419 tig0023193:+41120 Msa1406130:CDS
CGATGCTGGTCTTATTCCAC+CGG 0.493380 tig0023193:+40142 Msa1406130:CDS
GGATCTACCTGACGTAATAA+GGG 0.494934 tig0023193:+40859 Msa1406130:CDS
CTTCATGACTCTGCCGATGC+TGG 0.495057 tig0023193:+40128 Msa1406130:CDS
TTGAACCACCCTTCAATTGG+TGG 0.497309 tig0023193:+41364 Msa1406130:CDS
AGGCCTGATCTTGTCATTGG+CGG 0.501968 tig0023193:+41259 Msa1406130:CDS
TTAGAATTTGTCATTGAAGT+GGG 0.502488 tig0023193:+40905 Msa1406130:CDS
AACCTCTTGATTTAAGCAAA+CGG 0.503323 tig0023193:-39947 None:intergenic
TTCAAGCCATTCAAGACACT+TGG 0.503510 tig0023193:-41113 None:intergenic
ACATCACCATTACCTTCCAT+TGG 0.505333 tig0023193:-40029 None:intergenic
GTCTTTGAGACCATCCAAGA+TGG 0.507826 tig0023193:+39999 Msa1406130:CDS
TGATTTAGTAATGAAGGTAA+AGG 0.512922 tig0023193:-41037 None:intergenic
GTCAAGAATCCACCAATTGA+AGG 0.516692 tig0023193:-41373 None:intergenic
AAGATACCAAGTGTCTTGAA+TGG 0.518079 tig0023193:+41107 Msa1406130:CDS
AACCGTTTGCTTAAATCAAG+AGG 0.522168 tig0023193:+39945 Msa1406130:CDS
TCCTGGAATACAGTCTACTT+TGG 0.522749 tig0023193:-40816 None:intergenic
ATATGCAATATATGGGAGAC+TGG 0.528570 tig0023193:+41493 Msa1406130:CDS
AAGAAGTTACATGCACTAGT+TGG 0.534801 tig0023193:-40248 None:intergenic
TTTAGAATTTGTCATTGAAG+TGG 0.535263 tig0023193:+40904 Msa1406130:CDS
GAGAAAGAGATTTCAGATAG+AGG 0.538164 tig0023193:+41307 Msa1406130:CDS
CACTAGTTGGTGAAAAGAGA+AGG 0.540423 tig0023193:-40235 None:intergenic
TGGTTGTTCATACATGAACT+TGG 0.544475 tig0023193:+41654 Msa1406130:CDS
TCAAAATCCACATAGTAACT+TGG 0.546302 tig0023193:+41057 Msa1406130:CDS
TCCAGCAAGTACGCTTTCAA+CGG 0.552557 tig0023193:-41416 None:intergenic
CTGGAGTGCCGATGTTGTGT+TGG 0.554307 tig0023193:+41434 Msa1406130:CDS
CTAACTCCAATGGAAGGTAA+TGG 0.556057 tig0023193:+40023 Msa1406130:CDS
CTAGCAAGAAGTTCACCAAA+GGG 0.558966 tig0023193:-40104 None:intergenic
TCTGCAACCCTTATTACGTC+AGG 0.561278 tig0023193:-40866 None:intergenic
TGGTTCAATACTTGCTCTTG+AGG 0.562260 tig0023193:-41349 None:intergenic
CCAAGATGGTCTAACTCCAA+TGG 0.563528 tig0023193:+40013 Msa1406130:CDS
GTCCAATGGTATATAATGAA+GGG 0.565622 tig0023193:-41015 None:intergenic
CGGTGGAATAAGACCAGCAT+CGG 0.567219 tig0023193:-40141 None:intergenic
GATTCTTGACTCATTGTGGA+TGG 0.573721 tig0023193:+41386 Msa1406130:CDS
GAAGAGAACACCAGTATCAG+TGG 0.582545 tig0023193:+41634 Msa1406130:CDS
TAATGAAGGTAAAGGTCCAA+TGG 0.584631 tig0023193:-41029 None:intergenic
TGATTCCATATCCTCTTCAA+GGG 0.591237 tig0023193:+39838 Msa1406130:CDS
GGTGGATTCTTGACTCATTG+TGG 0.591311 tig0023193:+41382 Msa1406130:CDS
TTTCGTACAATGTTTGACAA+AGG 0.592549 tig0023193:+40284 Msa1406130:CDS
CTCACATAAACAACAGACTC+AGG 0.592864 tig0023193:-41145 None:intergenic
TTGGTGAAAAGAGAAGGATT+GGG 0.592979 tig0023193:-40229 None:intergenic
CGCAAATGATTACCTTTGAG+CGG 0.593158 tig0023193:-40314 None:intergenic
TCAAGAATCCACCAATTGAA+GGG 0.598039 tig0023193:-41372 None:intergenic
GATGGTCTAACTCCAATGGA+AGG 0.600300 tig0023193:+40017 Msa1406130:CDS
GGATTTATATGCCCTTGAAG+AGG 0.602809 tig0023193:-39849 None:intergenic
AAAGATGCCAAGTTACTATG+TGG 0.604877 tig0023193:-41064 None:intergenic
TGGAGTTAGACCATCTTGGA+TGG 0.607818 tig0023193:-40009 None:intergenic
CTTGGACAAGGTTATTAAGG+AGG 0.609792 tig0023193:+41672 Msa1406130:CDS
TATGGAATCAACACAGCATG+TGG 0.611821 tig0023193:-39825 None:intergenic
CAACTATTAGAGTTTGCTTG+GGG 0.615090 tig0023193:+41199 Msa1406130:CDS
ATAGAGGTCTAATTGCAAGC+TGG 0.620216 tig0023193:+41323 Msa1406130:CDS
AAAGGTCTAATACCGCTCAA+AGG 0.620948 tig0023193:+40302 Msa1406130:CDS
ATTGTATTCTGTATTGACAA+AGG 0.621699 tig0023193:-39919 None:intergenic
TTCATACATGAACTTGGACA+AGG 0.628136 tig0023193:+41660 Msa1406130:CDS
CTGATCAATGAATTGATGGT+GGG 0.629296 tig0023193:+41559 Msa1406130:CDS
TCTAGCAAGAAGTTCACCAA+AGG 0.630305 tig0023193:-40105 None:intergenic
GAGGTAAAGGAAAGAAGATG+AGG 0.631675 tig0023193:+41581 Msa1406130:CDS
ACTGATCAATGAATTGATGG+TGG 0.640089 tig0023193:+41558 Msa1406130:CDS
TAGTTGCTCTGGAGTCATGA+CGG 0.645295 tig0023193:-41182 None:intergenic
GAAACTAAGCAAGTAACCGG+TGG 0.654329 tig0023193:-40158 None:intergenic
ATCAATGAATTGATGGTGGG+AGG 0.672859 tig0023193:+41562 Msa1406130:CDS
AGAATCCACCAATTGAAGGG+TGG 0.687311 tig0023193:-41369 None:intergenic
AGTGTTAAAGATGATAGCAG+AGG 0.689062 tig0023193:-40945 None:intergenic
TACTAATGTGAAGAGAGATG+AGG 0.701583 tig0023193:+41528 Msa1406130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGATATATATGCAATATAT+GGG + tig0023193:41486-41505 Msa1406130:CDS 15.0%
!! TAGATATATATGCAATATAT+GGG + tig0023193:41486-41505 Msa1406130:CDS 15.0%
!! GCAAAATTTCTTCATATTAA+AGG + tig0023193:39885-39904 Msa1406130:CDS 20.0%
!!! AATGAGAACTTTTAATTTGA+CGG + tig0023193:40480-40499 Msa1406130:intron 20.0%
!!! TCAATGACAAATTCTAAAAT+GGG - tig0023193:40902-40921 None:intergenic 20.0%
!!! TTCAATGACAAATTCTAAAA+TGG - tig0023193:40903-40922 None:intergenic 20.0%
!! CATATATATCTACAGTTTAT+TGG - tig0023193:41478-41497 None:intergenic 20.0%
!! GTAGATATATATGCAATATA+TGG + tig0023193:41485-41504 Msa1406130:CDS 20.0%
!! GCAAAATTTCTTCATATTAA+AGG + tig0023193:39885-39904 Msa1406130:CDS 20.0%
!!! AATGAGAACTTTTAATTTGA+CGG + tig0023193:40480-40499 Msa1406130:intron 20.0%
!!! TCAATGACAAATTCTAAAAT+GGG - tig0023193:40902-40921 None:intergenic 20.0%
!!! TTCAATGACAAATTCTAAAA+TGG - tig0023193:40903-40922 None:intergenic 20.0%
!! CATATATATCTACAGTTTAT+TGG - tig0023193:41478-41497 None:intergenic 20.0%
!! GTAGATATATATGCAATATA+TGG + tig0023193:41485-41504 Msa1406130:CDS 20.0%
!! ATTGTATTCTGTATTGACAA+AGG - tig0023193:39922-39941 None:intergenic 25.0%
!!! ATTGATAATGACTCATTAAC+CGG + tig0023193:40523-40542 Msa1406130:intron 25.0%
!! TTTAGAATTTGTCATTGAAG+TGG + tig0023193:40904-40923 Msa1406130:CDS 25.0%
! TTAGAATTTGTCATTGAAGT+GGG + tig0023193:40905-40924 Msa1406130:CDS 25.0%
! TGATTTAGTAATGAAGGTAA+AGG - tig0023193:41040-41059 None:intergenic 25.0%
!!! GGATTTTGATTTAGTAATGA+AGG - tig0023193:41046-41065 None:intergenic 25.0%
! AAACTCAGATGACATAATAA+AGG - tig0023193:41287-41306 None:intergenic 25.0%
!! ATTGTATTCTGTATTGACAA+AGG - tig0023193:39922-39941 None:intergenic 25.0%
!!! ATTGATAATGACTCATTAAC+CGG + tig0023193:40523-40542 Msa1406130:intron 25.0%
!! TTTAGAATTTGTCATTGAAG+TGG + tig0023193:40904-40923 Msa1406130:CDS 25.0%
! TTAGAATTTGTCATTGAAGT+GGG + tig0023193:40905-40924 Msa1406130:CDS 25.0%
! TGATTTAGTAATGAAGGTAA+AGG - tig0023193:41040-41059 None:intergenic 25.0%
!!! GGATTTTGATTTAGTAATGA+AGG - tig0023193:41046-41065 None:intergenic 25.0%
! AAACTCAGATGACATAATAA+AGG - tig0023193:41287-41306 None:intergenic 25.0%
!!! AATTTTGCTAGTTTTAGCAG+TGG - tig0023193:39873-39892 None:intergenic 30.0%
AACCTCTTGATTTAAGCAAA+CGG - tig0023193:39950-39969 None:intergenic 30.0%
TTTCGTACAATGTTTGACAA+AGG + tig0023193:40284-40303 Msa1406130:CDS 30.0%
!!! AGAACTTTTAATTTGACGGT+TGG + tig0023193:40484-40503 Msa1406130:intron 30.0%
!! AAAGAAGTCAATAACTTGCT+AGG - tig0023193:40760-40779 None:intergenic 30.0%
TTCCCTTCATTATATACCAT+TGG + tig0023193:41013-41032 Msa1406130:CDS 30.0%
GTCCAATGGTATATAATGAA+GGG - tig0023193:41018-41037 None:intergenic 30.0%
TCAAAATCCACATAGTAACT+TGG + tig0023193:41057-41076 Msa1406130:CDS 30.0%
! CATCTTTAGGTTCAAATCTT+TGG + tig0023193:41080-41099 Msa1406130:CDS 30.0%
!! TCTGTTGTTTATGTGAGTTT+TGG + tig0023193:41151-41170 Msa1406130:CDS 30.0%
ATTGGTTGATCACCAAAAAA+TGG - tig0023193:41460-41479 None:intergenic 30.0%
GAAACTGATCAATGAATTGA+TGG + tig0023193:41555-41574 Msa1406130:CDS 30.0%
TGCTTTCTTCTTTAACTCTA+TGG - tig0023193:41614-41633 None:intergenic 30.0%
!!! AATTTTGCTAGTTTTAGCAG+TGG - tig0023193:39873-39892 None:intergenic 30.0%
AACCTCTTGATTTAAGCAAA+CGG - tig0023193:39950-39969 None:intergenic 30.0%
TTTCGTACAATGTTTGACAA+AGG + tig0023193:40284-40303 Msa1406130:CDS 30.0%
!!! AGAACTTTTAATTTGACGGT+TGG + tig0023193:40484-40503 Msa1406130:intron 30.0%
!! AAAGAAGTCAATAACTTGCT+AGG - tig0023193:40760-40779 None:intergenic 30.0%
TTCCCTTCATTATATACCAT+TGG + tig0023193:41013-41032 Msa1406130:CDS 30.0%
GTCCAATGGTATATAATGAA+GGG - tig0023193:41018-41037 None:intergenic 30.0%
TCAAAATCCACATAGTAACT+TGG + tig0023193:41057-41076 Msa1406130:CDS 30.0%
! CATCTTTAGGTTCAAATCTT+TGG + tig0023193:41080-41099 Msa1406130:CDS 30.0%
!! TCTGTTGTTTATGTGAGTTT+TGG + tig0023193:41151-41170 Msa1406130:CDS 30.0%
ATTGGTTGATCACCAAAAAA+TGG - tig0023193:41460-41479 None:intergenic 30.0%
GAAACTGATCAATGAATTGA+TGG + tig0023193:41555-41574 Msa1406130:CDS 30.0%
TGCTTTCTTCTTTAACTCTA+TGG - tig0023193:41614-41633 None:intergenic 30.0%
TTGATTCCATATCCTCTTCA+AGG + tig0023193:39837-39856 Msa1406130:CDS 35.0%
TGATTCCATATCCTCTTCAA+GGG + tig0023193:39838-39857 Msa1406130:CDS 35.0%
AACCGTTTGCTTAAATCAAG+AGG + tig0023193:39945-39964 Msa1406130:CDS 35.0%
! AGAGGTTCTAATTCTCTTGA+TGG + tig0023193:39963-39982 Msa1406130:CDS 35.0%
AAGAACTTCATCAAACCCTT+TGG + tig0023193:40089-40108 Msa1406130:CDS 35.0%
TCAGAAACTAAGCAAGTAAC+CGG - tig0023193:40164-40183 None:intergenic 35.0%
TCAGCAACTTGTATGGTAAA+TGG - tig0023193:40197-40216 None:intergenic 35.0%
ATTCTCTTCAGCAACTTGTA+TGG - tig0023193:40204-40223 None:intergenic 35.0%
TTGGTGAAAAGAGAAGGATT+GGG - tig0023193:40232-40251 None:intergenic 35.0%
AAGAAGTTACATGCACTAGT+TGG - tig0023193:40251-40270 None:intergenic 35.0%
TGTCAAACATTGTACGAAAG+TGG - tig0023193:40283-40302 None:intergenic 35.0%
CAACTCGTCAAATTGCTATA+AGG - tig0023193:40452-40471 None:intergenic 35.0%
GTAATATTGAGTAGAGTCAC+CGG - tig0023193:40545-40564 None:intergenic 35.0%
TGAGTCTCGTCAAATTATGT+GGG - tig0023193:40686-40705 None:intergenic 35.0%
ATGAGTCTCGTCAAATTATG+TGG - tig0023193:40687-40706 None:intergenic 35.0%
ATTGCAGAACTTTCGATTGA+AGG + tig0023193:40838-40857 Msa1406130:CDS 35.0%
AGTGTTAAAGATGATAGCAG+AGG - tig0023193:40948-40967 None:intergenic 35.0%
GGTCCAATGGTATATAATGA+AGG - tig0023193:41019-41038 None:intergenic 35.0%
TAATGAAGGTAAAGGTCCAA+TGG - tig0023193:41032-41051 None:intergenic 35.0%
AAAGATGCCAAGTTACTATG+TGG - tig0023193:41067-41086 None:intergenic 35.0%
CATAGTAACTTGGCATCTTT+AGG + tig0023193:41067-41086 Msa1406130:CDS 35.0%
AAGATACCAAGTGTCTTGAA+TGG + tig0023193:41107-41126 Msa1406130:CDS 35.0%
TCTTGAATGGCTTGAATCAA+AGG + tig0023193:41120-41139 Msa1406130:CDS 35.0%
! AGCAACTATTAGAGTTTGCT+TGG + tig0023193:41197-41216 Msa1406130:CDS 35.0%
! GCAACTATTAGAGTTTGCTT+GGG + tig0023193:41198-41217 Msa1406130:CDS 35.0%
! CAACTATTAGAGTTTGCTTG+GGG + tig0023193:41199-41218 Msa1406130:CDS 35.0%
! CAAAAAGGGTTTCTTGCTAT+TGG - tig0023193:41230-41249 None:intergenic 35.0%
! ATAGCAAGAAACCCTTTTTG+TGG + tig0023193:41230-41249 Msa1406130:CDS 35.0%
! AACCCTTTTTGTGGATCATT+AGG + tig0023193:41239-41258 Msa1406130:CDS 35.0%
GAGAAAGAGATTTCAGATAG+AGG + tig0023193:41307-41326 Msa1406130:CDS 35.0%
TCAAGAATCCACCAATTGAA+GGG - tig0023193:41375-41394 None:intergenic 35.0%
AAAAATGGCCAACACAACAT+CGG - tig0023193:41445-41464 None:intergenic 35.0%
!!! ATGTTGTGTTGGCCATTTTT+TGG + tig0023193:41445-41464 Msa1406130:CDS 35.0%
ATATGCAATATATGGGAGAC+TGG + tig0023193:41493-41512 Msa1406130:CDS 35.0%
TACTAATGTGAAGAGAGATG+AGG + tig0023193:41528-41547 Msa1406130:CDS 35.0%
ACTGATCAATGAATTGATGG+TGG + tig0023193:41558-41577 Msa1406130:CDS 35.0%
! CTGATCAATGAATTGATGGT+GGG + tig0023193:41559-41578 Msa1406130:CDS 35.0%
TGGTTGTTCATACATGAACT+TGG + tig0023193:41654-41673 Msa1406130:CDS 35.0%
TTCATACATGAACTTGGACA+AGG + tig0023193:41660-41679 Msa1406130:CDS 35.0%
GAACTTGGACAAGGTTATTA+AGG + tig0023193:41669-41688 Msa1406130:CDS 35.0%
TTGATTCCATATCCTCTTCA+AGG + tig0023193:39837-39856 Msa1406130:CDS 35.0%
TGATTCCATATCCTCTTCAA+GGG + tig0023193:39838-39857 Msa1406130:CDS 35.0%
AACCGTTTGCTTAAATCAAG+AGG + tig0023193:39945-39964 Msa1406130:CDS 35.0%
! AGAGGTTCTAATTCTCTTGA+TGG + tig0023193:39963-39982 Msa1406130:CDS 35.0%
AAGAACTTCATCAAACCCTT+TGG + tig0023193:40089-40108 Msa1406130:CDS 35.0%
TCAGAAACTAAGCAAGTAAC+CGG - tig0023193:40164-40183 None:intergenic 35.0%
TCAGCAACTTGTATGGTAAA+TGG - tig0023193:40197-40216 None:intergenic 35.0%
ATTCTCTTCAGCAACTTGTA+TGG - tig0023193:40204-40223 None:intergenic 35.0%
TTGGTGAAAAGAGAAGGATT+GGG - tig0023193:40232-40251 None:intergenic 35.0%
AAGAAGTTACATGCACTAGT+TGG - tig0023193:40251-40270 None:intergenic 35.0%
TGTCAAACATTGTACGAAAG+TGG - tig0023193:40283-40302 None:intergenic 35.0%
CAACTCGTCAAATTGCTATA+AGG - tig0023193:40452-40471 None:intergenic 35.0%
GTAATATTGAGTAGAGTCAC+CGG - tig0023193:40545-40564 None:intergenic 35.0%
TGAGTCTCGTCAAATTATGT+GGG - tig0023193:40686-40705 None:intergenic 35.0%
ATGAGTCTCGTCAAATTATG+TGG - tig0023193:40687-40706 None:intergenic 35.0%
ATTGCAGAACTTTCGATTGA+AGG + tig0023193:40838-40857 Msa1406130:CDS 35.0%
AGTGTTAAAGATGATAGCAG+AGG - tig0023193:40948-40967 None:intergenic 35.0%
GGTCCAATGGTATATAATGA+AGG - tig0023193:41019-41038 None:intergenic 35.0%
TAATGAAGGTAAAGGTCCAA+TGG - tig0023193:41032-41051 None:intergenic 35.0%
AAAGATGCCAAGTTACTATG+TGG - tig0023193:41067-41086 None:intergenic 35.0%
CATAGTAACTTGGCATCTTT+AGG + tig0023193:41067-41086 Msa1406130:CDS 35.0%
AAGATACCAAGTGTCTTGAA+TGG + tig0023193:41107-41126 Msa1406130:CDS 35.0%
TCTTGAATGGCTTGAATCAA+AGG + tig0023193:41120-41139 Msa1406130:CDS 35.0%
! AGCAACTATTAGAGTTTGCT+TGG + tig0023193:41197-41216 Msa1406130:CDS 35.0%
! GCAACTATTAGAGTTTGCTT+GGG + tig0023193:41198-41217 Msa1406130:CDS 35.0%
! CAACTATTAGAGTTTGCTTG+GGG + tig0023193:41199-41218 Msa1406130:CDS 35.0%
! CAAAAAGGGTTTCTTGCTAT+TGG - tig0023193:41230-41249 None:intergenic 35.0%
! ATAGCAAGAAACCCTTTTTG+TGG + tig0023193:41230-41249 Msa1406130:CDS 35.0%
! AACCCTTTTTGTGGATCATT+AGG + tig0023193:41239-41258 Msa1406130:CDS 35.0%
GAGAAAGAGATTTCAGATAG+AGG + tig0023193:41307-41326 Msa1406130:CDS 35.0%
TCAAGAATCCACCAATTGAA+GGG - tig0023193:41375-41394 None:intergenic 35.0%
AAAAATGGCCAACACAACAT+CGG - tig0023193:41445-41464 None:intergenic 35.0%
!!! ATGTTGTGTTGGCCATTTTT+TGG + tig0023193:41445-41464 Msa1406130:CDS 35.0%
ATATGCAATATATGGGAGAC+TGG + tig0023193:41493-41512 Msa1406130:CDS 35.0%
TACTAATGTGAAGAGAGATG+AGG + tig0023193:41528-41547 Msa1406130:CDS 35.0%
ACTGATCAATGAATTGATGG+TGG + tig0023193:41558-41577 Msa1406130:CDS 35.0%
! CTGATCAATGAATTGATGGT+GGG + tig0023193:41559-41578 Msa1406130:CDS 35.0%
TGGTTGTTCATACATGAACT+TGG + tig0023193:41654-41673 Msa1406130:CDS 35.0%
TTCATACATGAACTTGGACA+AGG + tig0023193:41660-41679 Msa1406130:CDS 35.0%
GAACTTGGACAAGGTTATTA+AGG + tig0023193:41669-41688 Msa1406130:CDS 35.0%
TATGGAATCAACACAGCATG+TGG - tig0023193:39828-39847 None:intergenic 40.0%
ATATGCCCTTGAAGAGGATA+TGG - tig0023193:39846-39865 None:intergenic 40.0%
GGATTTATATGCCCTTGAAG+AGG - tig0023193:39852-39871 None:intergenic 40.0%
CTAACTCCAATGGAAGGTAA+TGG + tig0023193:40023-40042 Msa1406130:CDS 40.0%
ACATCACCATTACCTTCCAT+TGG - tig0023193:40032-40051 None:intergenic 40.0%
CTAGCAAGAAGTTCACCAAA+GGG - tig0023193:40107-40126 None:intergenic 40.0%
TCTAGCAAGAAGTTCACCAA+AGG - tig0023193:40108-40127 None:intergenic 40.0%
! GTTGGTGAAAAGAGAAGGAT+TGG - tig0023193:40233-40252 None:intergenic 40.0%
!! CACTAGTTGGTGAAAAGAGA+AGG - tig0023193:40238-40257 None:intergenic 40.0%
AAAGGTCTAATACCGCTCAA+AGG + tig0023193:40302-40321 Msa1406130:CDS 40.0%
CGCAAATGATTACCTTTGAG+CGG - tig0023193:40317-40336 None:intergenic 40.0%
TCCTGGAATACAGTCTACTT+TGG - tig0023193:40819-40838 None:intergenic 40.0%
AATCGAAAGTTCTGCAATCC+TGG - tig0023193:40836-40855 None:intergenic 40.0%
AGGATCTACCTGACGTAATA+AGG + tig0023193:40858-40877 Msa1406130:CDS 40.0%
GGATCTACCTGACGTAATAA+GGG + tig0023193:40859-40878 Msa1406130:CDS 40.0%
TTCAAGCCATTCAAGACACT+TGG - tig0023193:41116-41135 None:intergenic 40.0%
CTCACATAAACAACAGACTC+AGG - tig0023193:41148-41167 None:intergenic 40.0%
GCAAACTCTAATAGTTGCTC+TGG - tig0023193:41196-41215 None:intergenic 40.0%
GGCCTAATGATCCACAAAAA+GGG - tig0023193:41244-41263 None:intergenic 40.0%
AGGCCTAATGATCCACAAAA+AGG - tig0023193:41245-41264 None:intergenic 40.0%
ATTAGGCCTGATCTTGTCAT+TGG + tig0023193:41256-41275 Msa1406130:CDS 40.0%
ATAGAGGTCTAATTGCAAGC+TGG + tig0023193:41323-41342 Msa1406130:CDS 40.0%
TGGTTCAATACTTGCTCTTG+AGG - tig0023193:41352-41371 None:intergenic 40.0%
GTATTGAACCACCCTTCAAT+TGG + tig0023193:41361-41380 Msa1406130:CDS 40.0%
GTCAAGAATCCACCAATTGA+AGG - tig0023193:41376-41395 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG + tig0023193:41386-41405 Msa1406130:CDS 40.0%
!! ATCAATGAATTGATGGTGGG+AGG + tig0023193:41562-41581 Msa1406130:CDS 40.0%
GAGGTAAAGGAAAGAAGATG+AGG + tig0023193:41581-41600 Msa1406130:CDS 40.0%
GTATGAACAACCACTGATAC+TGG - tig0023193:41647-41666 None:intergenic 40.0%
CTTGGACAAGGTTATTAAGG+AGG + tig0023193:41672-41691 Msa1406130:CDS 40.0%
TATGGAATCAACACAGCATG+TGG - tig0023193:39828-39847 None:intergenic 40.0%
ATATGCCCTTGAAGAGGATA+TGG - tig0023193:39846-39865 None:intergenic 40.0%
GGATTTATATGCCCTTGAAG+AGG - tig0023193:39852-39871 None:intergenic 40.0%
CTAACTCCAATGGAAGGTAA+TGG + tig0023193:40023-40042 Msa1406130:CDS 40.0%
ACATCACCATTACCTTCCAT+TGG - tig0023193:40032-40051 None:intergenic 40.0%
CTAGCAAGAAGTTCACCAAA+GGG - tig0023193:40107-40126 None:intergenic 40.0%
TCTAGCAAGAAGTTCACCAA+AGG - tig0023193:40108-40127 None:intergenic 40.0%
! GTTGGTGAAAAGAGAAGGAT+TGG - tig0023193:40233-40252 None:intergenic 40.0%
!! CACTAGTTGGTGAAAAGAGA+AGG - tig0023193:40238-40257 None:intergenic 40.0%
AAAGGTCTAATACCGCTCAA+AGG + tig0023193:40302-40321 Msa1406130:CDS 40.0%
CGCAAATGATTACCTTTGAG+CGG - tig0023193:40317-40336 None:intergenic 40.0%
TCCTGGAATACAGTCTACTT+TGG - tig0023193:40819-40838 None:intergenic 40.0%
AATCGAAAGTTCTGCAATCC+TGG - tig0023193:40836-40855 None:intergenic 40.0%
AGGATCTACCTGACGTAATA+AGG + tig0023193:40858-40877 Msa1406130:CDS 40.0%
GGATCTACCTGACGTAATAA+GGG + tig0023193:40859-40878 Msa1406130:CDS 40.0%
TTCAAGCCATTCAAGACACT+TGG - tig0023193:41116-41135 None:intergenic 40.0%
CTCACATAAACAACAGACTC+AGG - tig0023193:41148-41167 None:intergenic 40.0%
GCAAACTCTAATAGTTGCTC+TGG - tig0023193:41196-41215 None:intergenic 40.0%
GGCCTAATGATCCACAAAAA+GGG - tig0023193:41244-41263 None:intergenic 40.0%
AGGCCTAATGATCCACAAAA+AGG - tig0023193:41245-41264 None:intergenic 40.0%
ATTAGGCCTGATCTTGTCAT+TGG + tig0023193:41256-41275 Msa1406130:CDS 40.0%
ATAGAGGTCTAATTGCAAGC+TGG + tig0023193:41323-41342 Msa1406130:CDS 40.0%
TGGTTCAATACTTGCTCTTG+AGG - tig0023193:41352-41371 None:intergenic 40.0%
GTATTGAACCACCCTTCAAT+TGG + tig0023193:41361-41380 Msa1406130:CDS 40.0%
GTCAAGAATCCACCAATTGA+AGG - tig0023193:41376-41395 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG + tig0023193:41386-41405 Msa1406130:CDS 40.0%
!! ATCAATGAATTGATGGTGGG+AGG + tig0023193:41562-41581 Msa1406130:CDS 40.0%
GAGGTAAAGGAAAGAAGATG+AGG + tig0023193:41581-41600 Msa1406130:CDS 40.0%
GTATGAACAACCACTGATAC+TGG - tig0023193:41647-41666 None:intergenic 40.0%
CTTGGACAAGGTTATTAAGG+AGG + tig0023193:41672-41691 Msa1406130:CDS 40.0%
!! GTCTTTGAGACCATCCAAGA+TGG + tig0023193:39999-40018 Msa1406130:CDS 45.0%
TGGAGTTAGACCATCTTGGA+TGG - tig0023193:40012-40031 None:intergenic 45.0%
CCATTGGAGTTAGACCATCT+TGG - tig0023193:40016-40035 None:intergenic 45.0%
CCAAGATGGTCTAACTCCAA+TGG + tig0023193:40013-40032 Msa1406130:CDS 45.0%
GATGGTCTAACTCCAATGGA+AGG + tig0023193:40017-40036 Msa1406130:CDS 45.0%
GAAACTAAGCAAGTAACCGG+TGG - tig0023193:40161-40180 None:intergenic 45.0%
GCCAAAGTAGACTGTATTCC+AGG + tig0023193:40815-40834 Msa1406130:CDS 45.0%
TCTGCAACCCTTATTACGTC+AGG - tig0023193:40869-40888 None:intergenic 45.0%
!! TAGTTGCTCTGGAGTCATGA+CGG - tig0023193:41185-41204 None:intergenic 45.0%
! ATTAGAGTTTGCTTGGGGTC+TGG + tig0023193:41204-41223 Msa1406130:CDS 45.0%
TTGAACCACCCTTCAATTGG+TGG + tig0023193:41364-41383 Msa1406130:CDS 45.0%
AGAATCCACCAATTGAAGGG+TGG - tig0023193:41372-41391 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG + tig0023193:41382-41401 Msa1406130:CDS 45.0%
TCCAGCAAGTACGCTTTCAA+CGG - tig0023193:41419-41438 None:intergenic 45.0%
!! GAATTGATGGTGGGAGGTAA+AGG + tig0023193:41568-41587 Msa1406130:CDS 45.0%
GAAGAGAACACCAGTATCAG+TGG + tig0023193:41634-41653 Msa1406130:CDS 45.0%
!! GTCTTTGAGACCATCCAAGA+TGG + tig0023193:39999-40018 Msa1406130:CDS 45.0%
TGGAGTTAGACCATCTTGGA+TGG - tig0023193:40012-40031 None:intergenic 45.0%
CCATTGGAGTTAGACCATCT+TGG - tig0023193:40016-40035 None:intergenic 45.0%
CCAAGATGGTCTAACTCCAA+TGG + tig0023193:40013-40032 Msa1406130:CDS 45.0%
GATGGTCTAACTCCAATGGA+AGG + tig0023193:40017-40036 Msa1406130:CDS 45.0%
GAAACTAAGCAAGTAACCGG+TGG - tig0023193:40161-40180 None:intergenic 45.0%
GCCAAAGTAGACTGTATTCC+AGG + tig0023193:40815-40834 Msa1406130:CDS 45.0%
TCTGCAACCCTTATTACGTC+AGG - tig0023193:40869-40888 None:intergenic 45.0%
!! TAGTTGCTCTGGAGTCATGA+CGG - tig0023193:41185-41204 None:intergenic 45.0%
! ATTAGAGTTTGCTTGGGGTC+TGG + tig0023193:41204-41223 Msa1406130:CDS 45.0%
TTGAACCACCCTTCAATTGG+TGG + tig0023193:41364-41383 Msa1406130:CDS 45.0%
AGAATCCACCAATTGAAGGG+TGG - tig0023193:41372-41391 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG + tig0023193:41382-41401 Msa1406130:CDS 45.0%
TCCAGCAAGTACGCTTTCAA+CGG - tig0023193:41419-41438 None:intergenic 45.0%
!! GAATTGATGGTGGGAGGTAA+AGG + tig0023193:41568-41587 Msa1406130:CDS 45.0%
GAAGAGAACACCAGTATCAG+TGG + tig0023193:41634-41653 Msa1406130:CDS 45.0%
CGGTGGAATAAGACCAGCAT+CGG - tig0023193:40144-40163 None:intergenic 50.0%
!! CGATGCTGGTCTTATTCCAC+CGG + tig0023193:40142-40161 Msa1406130:CDS 50.0%
AGGCCTGATCTTGTCATTGG+CGG + tig0023193:41259-41278 Msa1406130:CDS 50.0%
! ACCGTTGAAAGCGTACTTGC+TGG + tig0023193:41415-41434 Msa1406130:CDS 50.0%
CGGTGGAATAAGACCAGCAT+CGG - tig0023193:40144-40163 None:intergenic 50.0%
!! CGATGCTGGTCTTATTCCAC+CGG + tig0023193:40142-40161 Msa1406130:CDS 50.0%
AGGCCTGATCTTGTCATTGG+CGG + tig0023193:41259-41278 Msa1406130:CDS 50.0%
! ACCGTTGAAAGCGTACTTGC+TGG + tig0023193:41415-41434 Msa1406130:CDS 50.0%
CTTCATGACTCTGCCGATGC+TGG + tig0023193:40128-40147 Msa1406130:CDS 55.0%
GAGCCGCCAATGACAAGATC+AGG - tig0023193:41265-41284 None:intergenic 55.0%
!! CTGGAGTGCCGATGTTGTGT+TGG + tig0023193:41434-41453 Msa1406130:CDS 55.0%
CTTCATGACTCTGCCGATGC+TGG + tig0023193:40128-40147 Msa1406130:CDS 55.0%
GAGCCGCCAATGACAAGATC+AGG - tig0023193:41265-41284 None:intergenic 55.0%
!! CTGGAGTGCCGATGTTGTGT+TGG + tig0023193:41434-41453 Msa1406130:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0023193 gene 39801 41714 39801 ID=Msa1406130;Name=Msa1406130
tig0023193 mRNA 39801 41714 39801 ID=Msa1406130-mRNA-1;Parent=Msa1406130;Name=Msa1406130-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|479
tig0023193 exon 39801 40323 39801 ID=Msa1406130-mRNA-1:exon:24421;Parent=Msa1406130-mRNA-1
tig0023193 exon 40798 41714 40798 ID=Msa1406130-mRNA-1:exon:24422;Parent=Msa1406130-mRNA-1
tig0023193 CDS 39801 40323 39801 ID=Msa1406130-mRNA-1:cds;Parent=Msa1406130-mRNA-1
tig0023193 CDS 40798 41714 40798 ID=Msa1406130-mRNA-1:cds;Parent=Msa1406130-mRNA-1
Gene Sequence

>Msa1406130

ATGAGTTACATTGTTAATAAAAAGCCACATGCTGTGTTGATTCCATATCCTCTTCAAGGGCATATAAATCCACTGCTAAAACTAGCAAAATTTCTTCATATTAAAGGCTTTCACATAACCTTTGTCAATACAGAATACAATCACAACCGTTTGCTTAAATCAAGAGGTTCTAATTCTCTTGATGGTTTCACTGATTTTGTCTTTGAGACCATCCAAGATGGTCTAACTCCAATGGAAGGTAATGGTGATGTTAGTCAAGACTTGACATCTCTTTCTCAATCAGTTAGTAAGAACTTCATCAAACCCTTTGGTGAACTTCTTGCTAGACTTCATGACTCTGCCGATGCTGGTCTTATTCCACCGGTTACTTGCTTAGTTTCTGATTGTTACATGCCATTTACCATACAAGTTGCTGAAGAGAATGCACTCCCAATCCTTCTCTTTTCACCAACTAGTGCATGTAACTTCTTAACTACTTTCCACTTTCGTACAATGTTTGACAAAGGTCTAATACCGCTCAAAGTTGAGAGTTACTTAGACGCCAAAGTAGACTGTATTCCAGGATTGCAGAACTTTCGATTGAAGGATCTACCTGACGTAATAAGGGTTGCAGATCGTAAAGATCCCATTTTAGAATTTGTCATTGAAGTGGGAGATAGCTTTCACAAAGCCTCTGCTATCATCTTTAACACTTATGATGAACTCGAGAGTGATGTAATGAATGCACTATATTATGTGTTCCCTTCATTATATACCATTGGACCTTTACCTTCATTACTAAATCAAAATCCACATAGTAACTTGGCATCTTTAGGTTCAAATCTTTGGAAAGAAGATACCAAGTGTCTTGAATGGCTTGAATCAAAGGAACCTGAGTCTGTTGTTTATGTGAGTTTTGGCAGCATTACCGTCATGACTCCAGAGCAACTATTAGAGTTTGCTTGGGGTCTGGCCAATAGCAAGAAACCCTTTTTGTGGATCATTAGGCCTGATCTTGTCATTGGCGGCTCCTTTATTATGTCATCTGAGTTTGAGAAAGAGATTTCAGATAGAGGTCTAATTGCAAGCTGGTGTCCTCAAGAGCAAGTATTGAACCACCCTTCAATTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCGTTGAAAGCGTACTTGCTGGAGTGCCGATGTTGTGTTGGCCATTTTTTGGTGATCAACCAATAAACTGTAGATATATATGCAATATATGGGAGACTGGAATCGAAATCGATACTAATGTGAAGAGAGATGAGGTCGAGAAACTGATCAATGAATTGATGGTGGGAGGTAAAGGAAAGAAGATGAGGCAAAATGCCATAGAGTTAAAGAAGAAAGCAGAAGAGAACACCAGTATCAGTGGTTGTTCATACATGAACTTGGACAAGGTTATTAAGGAGGTCTTGCTTAAAAAATATTAA

Protein sequence

>Msa1406130

MSYIVNKKPHAVLIPYPLQGHINPLLKLAKFLHIKGFHITFVNTEYNHNRLLKSRGSNSLDGFTDFVFETIQDGLTPMEGNGDVSQDLTSLSQSVSKNFIKPFGELLARLHDSADAGLIPPVTCLVSDCYMPFTIQVAEENALPILLFSPTSACNFLTTFHFRTMFDKGLIPLKVESYLDAKVDCIPGLQNFRLKDLPDVIRVADRKDPILEFVIEVGDSFHKASAIIFNTYDELESDVMNALYYVFPSLYTIGPLPSLLNQNPHSNLASLGSNLWKEDTKCLEWLESKEPESVVYVSFGSITVMTPEQLLEFAWGLANSKKPFLWIIRPDLVIGGSFIMSSEFEKEISDRGLIASWCPQEQVLNHPSIGGFLTHCGWNSTVESVLAGVPMLCWPFFGDQPINCRYICNIWETGIEIDTNVKRDEVEKLINELMVGGKGKKMRQNAIELKKKAEENTSISGCSYMNLDKVIKEVLLKKY*