AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1136620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1136620 MtrunA17_Chr5g0413811 59.574 282 61 3 160 393 392 668 8.86e-89 285
Msa1136620 MtrunA17_Chr5g0413811 32.090 402 178 9 1 362 92 438 1.41e-36 143
Msa1136620 MtrunA17_Chr5g0414301 48.518 371 89 8 88 361 31 396 3.59e-83 268
Msa1136620 MtrunA17_Chr5g0414301 38.710 217 114 7 173 389 368 565 1.21e-23 104
Msa1136620 MtrunA17_Chr5g0414201 39.208 505 138 15 1 361 316 795 3.75e-81 271
Msa1136620 MtrunA17_Chr5g0414181 40.365 493 138 17 1 344 315 800 3.66e-74 252
Msa1136620 MtrunA17_Chr5g0415481 37.534 373 139 12 88 367 41 412 2.43e-55 192
Msa1136620 MtrunA17_Chr5g0415511 34.038 473 155 13 1 400 316 704 1.43e-54 195
Msa1136620 MtrunA17_Chr5g0417251 46.388 263 79 6 157 362 383 640 6.97e-51 184
Msa1136620 MtrunA17_Chr5g0417251 73.626 91 24 0 1 91 81 171 6.56e-37 144
Msa1136620 MtrunA17_Chr5g0414161 68.794 141 40 3 157 295 105 243 2.67e-49 174
Msa1136620 MtrunA17_Chr3g0087301 34.646 381 184 8 1 362 316 650 5.02e-49 181
Msa1136620 MtrunA17_Chr3g0087301 54.922 193 76 6 156 339 600 790 2.00e-48 179
Msa1136620 MtrunA17_Chr3g0087301 56.757 111 45 1 284 394 973 1080 5.25e-26 112
Msa1136620 MtrunA17_Chr5g0414311 48.837 215 96 6 156 361 623 832 1.17e-45 171
Msa1136620 MtrunA17_Chr5g0414311 66.667 96 32 0 1 96 320 415 1.95e-34 138
Msa1136620 MtrunA17_Chr5g0414311 51.351 111 51 1 284 394 994 1101 1.23e-24 108
Msa1136620 MtrunA17_Chr5g0415471 49.772 219 76 7 157 366 622 815 2.73e-45 170
Msa1136620 MtrunA17_Chr5g0415471 71.591 88 25 0 1 88 318 405 8.06e-35 139
Msa1136620 MtrunA17_Chr5g0415471 51.818 110 50 1 284 393 991 1097 3.62e-25 109
Msa1136620 MtrunA17_Chr5g0414171 76.136 88 21 0 1 88 243 330 2.13e-37 142
Msa1136620 MtrunA17_Chr5g0414291 73.864 88 23 0 1 88 320 407 9.86e-37 140
Msa1136620 MtrunA17_Chr5g0430901 31.317 463 195 17 1 365 311 748 1.26e-35 141
Msa1136620 MtrunA17_Chr5g0414231 67.033 91 30 0 1 91 316 406 1.84e-32 129
Msa1136620 MtrunA17_Chr6g0468331 28.747 407 232 11 1 388 304 671 3.06e-30 125
Msa1136620 MtrunA17_Chr4g0020501 27.913 412 209 16 6 337 279 682 1.30e-27 117
Msa1136620 MtrunA17_Chr3g0123111 27.822 381 189 12 76 374 451 827 3.49e-26 113
Msa1136620 MtrunA17_Chr3g0123111 50.000 96 48 0 1 96 306 401 2.59e-22 101
Msa1136620 MtrunA17_Chr3g0123111 29.911 224 127 7 176 393 891 1090 6.24e-13 71.6
Msa1136620 MtrunA17_Chr7g0257541 24.640 556 228 17 1 393 335 862 5.19e-26 112
Msa1136620 MtrunA17_Chr5g0414211 54.167 120 51 2 275 394 277 392 9.24e-26 109
Msa1136620 MtrunA17_Chr5g0414211 51.240 121 46 5 229 336 7 127 6.54e-21 94.7
Msa1136620 MtrunA17_Chr6g0468101 30.278 360 202 13 76 391 451 805 1.02e-25 111
Msa1136620 MtrunA17_Chr6g0468101 50.000 96 48 0 1 96 306 401 1.16e-21 99.0
Msa1136620 MtrunA17_Chr6g0468101 28.992 238 126 5 157 393 858 1053 3.34e-14 75.5
Msa1136620 MtrunA17_Chr6g0470021 31.646 316 186 11 119 407 449 761 1.24e-25 111
Msa1136620 MtrunA17_Chr6g0470021 48.077 104 54 0 1 104 198 301 4.61e-23 103
Msa1136620 MtrunA17_Chr3g0092261 24.946 465 191 14 3 309 366 830 1.85e-25 110
Msa1136620 MtrunA17_Chr6g0470011 33.935 277 159 9 119 374 559 832 4.89e-25 109
Msa1136620 MtrunA17_Chr6g0470011 50.000 96 48 0 1 96 307 402 1.76e-22 101
Msa1136620 MtrunA17_Chr6g0470011 37.255 102 58 2 300 401 1004 1099 2.95e-12 69.3
Msa1136620 MtrunA17_Chr6g0467911 46.154 143 71 4 157 295 606 746 7.31e-25 108
Msa1136620 MtrunA17_Chr6g0467911 48.958 96 49 0 1 96 307 402 7.50e-22 99.4
Msa1136620 MtrunA17_Chr6g0470001 36.066 244 139 8 159 388 215 455 1.54e-24 107
Msa1136620 MtrunA17_Chr6g0470001 38.776 98 54 2 300 397 611 702 3.00e-11 65.9
Msa1136620 MtrunA17_Chr7g0257221 26.119 536 243 18 1 393 336 861 1.81e-24 107
Msa1136620 MtrunA17_Chr6g0470081 48.077 104 54 0 1 104 307 410 6.24e-23 103
Msa1136620 MtrunA17_Chr6g0470081 35.526 228 132 7 159 374 608 832 6.42e-22 99.8
Msa1136620 MtrunA17_Chr6g0470081 38.182 110 62 2 284 393 988 1091 3.06e-14 75.9
Msa1136620 MtrunA17_Chr3g0085931 32.090 268 154 10 130 374 568 830 7.55e-23 102
Msa1136620 MtrunA17_Chr3g0085931 51.136 88 43 0 1 88 307 394 1.56e-20 95.5
Msa1136620 MtrunA17_Chr6g0468271 31.159 276 167 8 119 374 552 824 9.46e-23 102
Msa1136620 MtrunA17_Chr6g0468271 38.835 103 63 0 1 103 303 405 1.55e-16 83.2
Msa1136620 MtrunA17_Chr4g0071021 49.515 103 52 0 1 103 294 396 9.78e-23 100
Msa1136620 MtrunA17_Chr7g0257201 25.830 542 237 22 1 393 336 861 1.10e-22 102
Msa1136620 MtrunA17_Chr6g0468361 33.191 235 142 7 154 376 208 439 1.82e-22 100
Msa1136620 MtrunA17_Chr8g0351821 51.042 96 47 0 1 96 307 402 3.25e-22 99.4
Msa1136620 MtrunA17_Chr5g0430291 50.000 96 48 0 1 96 311 406 3.54e-22 100
Msa1136620 MtrunA17_Chr5g0430291 34.562 217 109 7 157 368 609 797 4.56e-18 87.8
Msa1136620 MtrunA17_Chr5g0433771 23.698 557 240 19 1 392 316 852 4.29e-22 100
Msa1136620 MtrunA17_Chr6g0468021 34.667 225 135 6 159 374 602 823 4.59e-22 100
Msa1136620 MtrunA17_Chr6g0468021 44.444 90 50 0 7 96 310 399 6.93e-19 90.5
Msa1136620 MtrunA17_Chr6g0468021 45.652 92 47 1 300 391 984 1072 3.60e-14 75.5
Msa1136620 MtrunA17_Chr5g0430511 47.917 96 50 0 1 96 312 407 6.41e-22 99.8
Msa1136620 MtrunA17_Chr5g0430511 35.583 163 96 5 154 309 607 767 5.12e-15 78.2
Msa1136620 MtrunA17_Chr6g0467961 29.964 277 173 7 116 374 550 823 8.63e-22 99.4
Msa1136620 MtrunA17_Chr6g0467961 45.556 90 49 0 7 96 310 399 6.63e-19 90.5
Msa1136620 MtrunA17_Chr6g0468151 32.922 243 150 7 154 386 605 844 1.12e-21 99.0
Msa1136620 MtrunA17_Chr6g0468151 50.617 81 40 0 7 87 318 398 1.49e-18 89.4
Msa1136620 MtrunA17_Chr6g0468151 27.897 233 127 4 157 388 893 1085 2.21e-11 66.6
Msa1136620 MtrunA17_Chr5g0430141 48.889 90 46 0 7 96 318 407 4.22e-21 97.4
Msa1136620 MtrunA17_Chr5g0430141 34.043 235 135 7 157 377 611 839 1.36e-19 92.4
Msa1136620 MtrunA17_Chr6g0468201 31.452 248 155 8 154 391 204 446 4.96e-21 96.7
Msa1136620 MtrunA17_Chr6g0468201 43.434 99 53 1 300 398 589 684 2.33e-14 75.9
Msa1136620 MtrunA17_Chr3g0082101 25.935 401 185 13 3 292 327 726 5.36e-21 97.1
Msa1136620 MtrunA17_Chr5g0431051 48.889 90 46 0 7 96 318 407 1.02e-20 95.9
Msa1136620 MtrunA17_Chr5g0431051 33.585 265 113 9 157 365 611 868 1.28e-20 95.9
Msa1136620 MtrunA17_Chr5g0430341 32.830 265 115 9 157 365 153 410 3.19e-20 93.6
Msa1136620 MtrunA17_Chr5g0429951 46.875 96 51 0 1 96 311 406 1.07e-19 92.8
Msa1136620 MtrunA17_Chr5g0429951 41.406 128 69 3 157 279 610 736 1.13e-15 80.1
Msa1136620 MtrunA17_Chr5g0430641 32.245 245 152 6 157 391 609 849 1.70e-19 92.4
Msa1136620 MtrunA17_Chr5g0430641 46.875 96 51 0 1 96 311 406 4.59e-18 87.8
Msa1136620 MtrunA17_Chr5g0430621 45.833 96 52 0 1 96 311 406 1.73e-19 92.4
Msa1136620 MtrunA17_Chr5g0430621 31.559 263 115 10 161 365 612 867 6.54e-16 80.9
Msa1136620 MtrunA17_Chr1g0155991 47.917 96 50 0 1 96 308 403 2.48e-19 91.7
Msa1136620 MtrunA17_Chr1g0155991 34.314 204 101 8 163 361 612 787 2.03e-15 79.3
Msa1136620 MtrunA17_Chr6g0468121 30.736 231 146 7 154 374 600 826 3.90e-19 91.3
Msa1136620 MtrunA17_Chr6g0468121 45.556 90 49 0 7 96 311 400 2.02e-18 89.0
Msa1136620 MtrunA17_Chr6g0468121 28.452 239 119 7 162 393 885 1078 1.48e-13 73.6
Msa1136620 MtrunA17_Chr3g0082891 28.571 280 173 9 128 393 574 840 4.23e-19 90.9
Msa1136620 MtrunA17_Chr6g0468451 48.864 88 45 0 1 88 305 392 4.75e-19 90.9
Msa1136620 MtrunA17_Chr6g0468451 29.412 272 168 8 119 369 555 823 4.75e-19 90.9
Msa1136620 MtrunA17_Chr6g0468451 38.384 99 58 2 295 393 1005 1100 1.52e-12 70.5
Msa1136620 MtrunA17_Chr1g0155321 46.809 94 50 0 3 96 308 401 4.81e-19 90.9
Msa1136620 MtrunA17_Chr1g0155321 40.000 155 84 6 162 309 609 761 5.59e-17 84.3
Msa1136620 MtrunA17_Chr7g0244231 32.479 234 140 7 157 377 601 829 7.82e-19 90.1
Msa1136620 MtrunA17_Chr7g0244231 44.792 96 53 0 1 96 306 401 4.33e-17 84.7
Msa1136620 MtrunA17_Chr5g0429961 44.681 94 52 0 3 96 313 406 9.00e-19 90.1
Msa1136620 MtrunA17_Chr5g0429961 32.751 229 142 5 157 377 606 830 5.80e-18 87.4
Msa1136620 MtrunA17_Chr8g0351811 29.012 324 204 11 85 386 45 364 1.74e-18 88.6
Msa1136620 MtrunA17_Chr8g0351811 30.000 230 141 7 182 396 398 622 4.97e-15 77.8
Msa1136620 MtrunA17_Chr5g0430441 46.875 96 51 0 1 96 311 406 4.08e-18 87.8
Msa1136620 MtrunA17_Chr5g0430441 33.803 213 112 5 157 368 609 793 1.98e-16 82.8
Msa1136620 MtrunA17_Chr5g0430951 32.443 262 143 7 157 413 607 839 5.45e-18 87.4
Msa1136620 MtrunA17_Chr5g0430951 42.708 96 54 1 1 96 311 405 8.92e-16 80.5
Msa1136620 MtrunA17_Chr3g0085651 26.740 273 170 9 82 343 555 808 6.00e-18 87.4
Msa1136620 MtrunA17_Chr5g0430721 43.750 96 54 0 1 96 352 447 6.83e-18 87.4
Msa1136620 MtrunA17_Chr5g0430721 32.353 238 142 8 162 386 654 885 1.68e-17 85.9
Msa1136620 MtrunA17_Chr1g0189551 23.956 551 233 17 1 393 346 868 7.36e-18 87.0
Msa1136620 MtrunA17_Chr2g0282891 26.772 254 141 6 1 209 26 279 7.98e-18 85.1
Msa1136620 MtrunA17_Chr8g0355411 26.950 423 225 17 7 368 323 722 1.16e-17 86.3
Msa1136620 MtrunA17_Chr8g0355411 26.394 269 151 8 156 397 597 845 8.17e-14 74.3
Msa1136620 MtrunA17_Chr7g0248221 22.778 540 254 18 1 394 325 847 1.29e-17 86.3
Msa1136620 MtrunA17_Chr3g0087841 23.502 434 173 12 3 279 322 753 1.64e-17 86.3
Msa1136620 MtrunA17_Chr5g0430331 49.398 83 42 0 2 84 308 390 1.80e-17 84.7
Msa1136620 MtrunA17_Chr5g0410301 31.868 273 159 11 128 377 561 829 1.83e-17 85.9
Msa1136620 MtrunA17_Chr6g0468111 41.237 97 57 0 1 97 148 244 3.67e-17 84.3
Msa1136620 MtrunA17_Chr5g0410161 30.225 311 165 13 95 368 686 981 4.46e-17 84.7
Msa1136620 MtrunA17_Chr6g0468341 43.750 96 54 0 1 96 306 401 4.47e-17 84.7
Msa1136620 MtrunA17_Chr5g0430581 36.150 213 107 8 157 368 602 786 4.72e-17 84.7
Msa1136620 MtrunA17_Chr5g0430581 43.750 96 53 1 1 96 306 400 1.66e-16 82.8
Msa1136620 MtrunA17_Chr3g0089911 24.646 353 128 9 3 222 321 668 6.23e-17 84.0
Msa1136620 MtrunA17_Chr3g0082881 29.885 261 138 12 121 343 568 821 1.58e-16 82.8
Msa1136620 MtrunA17_Chr4g0027251 43.750 96 54 0 1 96 311 406 1.59e-16 82.8
Msa1136620 MtrunA17_Chr4g0027251 40.458 131 72 3 154 279 609 738 2.55e-16 82.4
Msa1136620 MtrunA17_Chr3g0087581 34.392 189 115 7 157 340 617 801 2.54e-16 82.4
Msa1136620 MtrunA17_Chr3g0087581 41.772 79 45 1 8 85 313 391 3.52e-11 65.9
Msa1136620 MtrunA17_Chr3g0086091 33.178 214 114 7 154 364 424 611 2.75e-16 82.0
Msa1136620 MtrunA17_Chr3g0086091 45.570 79 42 1 8 85 121 199 6.09e-14 74.7
Msa1136620 MtrunA17_Chr5g0415491 68.085 47 15 0 1 47 175 221 9.10e-16 76.6
Msa1136620 MtrunA17_Chr7g0257191 26.776 366 196 11 97 395 504 864 1.34e-15 80.1
Msa1136620 MtrunA17_Chr6g0468381 31.092 238 121 6 157 393 314 509 1.83e-15 79.0
Msa1136620 MtrunA17_Chr3g0085551 27.778 270 172 11 90 348 445 702 2.15e-15 79.3
Msa1136620 MtrunA17_Chr6g0468141 50.000 70 35 0 7 76 194 263 2.60e-15 75.9
Msa1136620 MtrunA17_Chr1g0169901 39.535 86 48 1 1 82 310 395 4.23e-15 78.6
Msa1136620 MtrunA17_Chr5g0410261 31.884 276 152 14 128 375 592 859 4.26e-15 78.6
Msa1136620 MtrunA17_Chr3g0086151 26.736 288 169 11 87 367 549 801 4.30e-15 78.2
Msa1136620 MtrunA17_Chr3g0086151 44.304 79 43 1 8 85 310 388 7.92e-14 74.3
Msa1136620 MtrunA17_Chr3g0086221 31.776 214 117 7 154 364 612 799 7.54e-15 77.8
Msa1136620 MtrunA17_Chr3g0086181 35.912 181 103 8 157 329 616 791 8.82e-15 77.4
Msa1136620 MtrunA17_Chr3g0086181 44.304 79 43 1 8 85 310 388 6.31e-14 74.7
Msa1136620 MtrunA17_Chr7g0221481 25.850 294 176 9 83 368 556 815 9.52e-15 77.4
Msa1136620 MtrunA17_Chr3g0086741 29.730 222 121 7 154 368 642 835 1.42e-14 76.6
Msa1136620 MtrunA17_Chr3g0082811 26.437 261 146 9 121 365 568 798 1.59e-14 76.6
Msa1136620 MtrunA17_Chr4g0071011 37.333 150 86 5 166 309 109 256 1.73e-14 75.9
Msa1136620 MtrunA17_Chr3g0085091 25.939 293 164 9 90 368 561 814 1.84e-14 76.6
Msa1136620 MtrunA17_Chr3g0086621 25.092 271 178 10 84 343 545 801 3.26e-14 75.9
Msa1136620 MtrunA17_Chr5g0414221 34.815 135 64 6 94 205 14 147 3.60e-14 70.1
Msa1136620 MtrunA17_Chr6g0468251 24.629 337 203 10 67 399 155 444 3.79e-14 74.7
Msa1136620 MtrunA17_Chr5g0410351 29.042 334 181 16 95 389 539 855 4.19e-14 75.5
Msa1136620 MtrunA17_Chr3g0084051 26.449 276 190 8 91 362 570 836 4.72e-14 75.1
Msa1136620 MtrunA17_Chr3g0084051 35.870 92 58 1 1 91 321 412 9.81e-12 67.8
Msa1136620 MtrunA17_Chr3g0086071 25.347 288 172 10 87 367 170 421 5.72e-14 74.7
Msa1136620 MtrunA17_Chr6g0467921 30.085 236 121 8 161 395 116 308 8.75e-14 72.8
Msa1136620 MtrunA17_Chr4g0025391 38.372 86 50 1 2 84 320 405 1.26e-13 73.9
Msa1136620 MtrunA17_Chr3g0086161 25.773 291 170 12 87 368 550 803 1.34e-13 73.6
Msa1136620 MtrunA17_Chr5g0446611 24.460 278 129 7 1 197 321 598 1.57e-13 73.6
Msa1136620 MtrunA17_Chr1g0164581 43.210 81 45 1 4 83 299 379 2.39e-13 72.8
Msa1136620 MtrunA17_Chr5g0410481 30.820 305 176 12 94 375 531 823 2.57e-13 72.8
Msa1136620 MtrunA17_Chr3g0089441 30.270 185 119 8 134 309 109 292 3.80e-13 72.0
Msa1136620 MtrunA17_Chr6g0468261 26.744 258 144 7 136 392 129 342 5.42e-13 70.5
Msa1136620 MtrunA17_Chr1g0164631 40.506 79 46 1 4 81 332 410 5.97e-13 71.6
Msa1136620 MtrunA17_Chr3g0082131 41.975 81 46 1 4 83 323 403 5.99e-13 71.6
Msa1136620 MtrunA17_Chr3g0082131 30.952 210 112 8 157 361 638 819 8.46e-11 64.7
Msa1136620 MtrunA17_Chr3g0085431 28.713 303 153 13 94 340 121 416 6.51e-13 70.9
Msa1136620 MtrunA17_Chr1g0164611 23.208 293 135 7 3 205 327 619 6.51e-13 71.6
Msa1136620 MtrunA17_Chr3g0092241 31.351 185 117 8 134 309 603 786 6.64e-13 71.6
Msa1136620 MtrunA17_Chr3g0092241 34.884 86 53 1 3 85 322 407 4.73e-12 68.9
Msa1136620 MtrunA17_Chr3g0089431 35.227 88 54 1 3 87 326 413 7.31e-13 70.5
Msa1136620 MtrunA17_Chr3g0090371 39.773 88 50 2 3 87 322 409 8.26e-13 71.2
Msa1136620 MtrunA17_Chr3g0089471 30.114 176 114 6 157 324 678 852 8.54e-13 71.2
Msa1136620 MtrunA17_Chr3g0090431 40.698 86 48 2 3 85 194 279 9.27e-13 70.9
Msa1136620 MtrunA17_Chr3g0078361 39.506 81 48 1 4 83 140 220 9.30e-13 70.1
Msa1136620 MtrunA17_Chr3g0082791 39.535 86 51 1 1 85 323 408 9.69e-13 70.9
Msa1136620 MtrunA17_Chr2g0309151 24.146 410 244 13 1 368 104 488 1.09e-12 70.1
Msa1136620 MtrunA17_Chr3g0089501 30.000 160 106 5 154 308 625 783 1.19e-12 70.5
Msa1136620 MtrunA17_Chr3g0089501 38.372 86 50 1 3 85 320 405 3.01e-12 69.3
Msa1136620 MtrunA17_Chr3g0089541 28.934 197 109 6 159 324 611 807 1.20e-12 70.9
Msa1136620 MtrunA17_Chr3g0089541 33.708 89 56 1 2 87 325 413 1.43e-12 70.5
Msa1136620 MtrunA17_Chr3g0089651 29.557 203 130 9 134 324 607 808 1.32e-12 70.5
Msa1136620 MtrunA17_Chr3g0089651 35.227 88 54 1 3 87 326 413 1.99e-12 70.1
Msa1136620 MtrunA17_Chr3g0090141 39.773 88 50 2 3 87 322 409 1.37e-12 70.5
Msa1136620 MtrunA17_Chr3g0091011 26.948 308 149 11 154 401 597 888 1.38e-12 70.5
Msa1136620 MtrunA17_Chr2g0282991 23.529 289 134 9 1 205 318 603 1.48e-12 70.5
Msa1136620 MtrunA17_Chr3g0089761 30.542 203 127 10 134 324 603 803 1.72e-12 70.1
Msa1136620 MtrunA17_Chr3g0089761 36.364 88 53 1 3 87 322 409 7.32e-12 68.2
Msa1136620 MtrunA17_Chr7g0257251 44.578 83 45 1 1 82 2 84 1.78e-12 65.9
Msa1136620 MtrunA17_Chr3g0090401 40.698 86 48 2 3 85 533 618 1.94e-12 70.1
Msa1136620 MtrunA17_Chr2g0308491 39.080 87 51 2 1 85 140 226 2.45e-12 67.0
Msa1136620 MtrunA17_Chr3g0089601 30.000 160 106 5 154 308 625 783 2.72e-12 69.3
Msa1136620 MtrunA17_Chr3g0089601 38.372 86 50 1 3 85 320 405 1.30e-11 67.4
Msa1136620 MtrunA17_Chr3g0089781 37.079 89 52 2 3 88 322 409 2.87e-12 69.3
Msa1136620 MtrunA17_Chr6g0469991 52.459 61 29 0 1 61 307 367 3.36e-12 68.2
Msa1136620 MtrunA17_Chr3g0080871 30.275 218 118 8 157 368 616 805 3.37e-12 69.3
Msa1136620 MtrunA17_Chr3g0091081 35.227 88 54 1 3 87 322 409 3.68e-12 69.3
Msa1136620 MtrunA17_Chr3g0089871 37.647 85 50 1 3 84 321 405 3.70e-12 69.3
Msa1136620 MtrunA17_Chr1g0169951 44.706 85 46 1 1 84 334 418 4.06e-12 68.9
Msa1136620 MtrunA17_Chr3g0089211 28.877 187 127 6 154 337 674 857 4.28e-12 68.9
Msa1136620 MtrunA17_Chr3g0089211 35.227 88 54 1 3 87 369 456 9.57e-12 67.8
Msa1136620 MtrunA17_Chr3g0089251 28.877 187 127 6 154 337 656 839 4.45e-12 68.9
Msa1136620 MtrunA17_Chr3g0089251 35.227 88 54 1 3 87 351 438 1.09e-11 67.8
Msa1136620 MtrunA17_Chr3g0085751 25.501 349 181 13 90 373 553 887 4.94e-12 68.9
Msa1136620 MtrunA17_Chr1g0147141 42.254 71 41 0 3 73 327 397 5.86e-12 68.6
Msa1136620 MtrunA17_Chr3g0085561 33.333 117 69 3 1 116 291 399 6.12e-12 68.6
Msa1136620 MtrunA17_Chr3g0091061 36.471 85 51 1 3 84 322 406 6.12e-12 68.6
Msa1136620 MtrunA17_Chr3g0090691 36.047 86 52 1 3 85 322 407 6.23e-12 68.6
Msa1136620 MtrunA17_Chr3g0089991 27.055 292 164 12 79 329 529 812 6.27e-12 68.6
Msa1136620 MtrunA17_Chr3g0089991 35.227 88 54 1 3 87 326 413 2.85e-11 66.2
Msa1136620 MtrunA17_Chr3g0089811 36.364 88 53 1 3 87 322 409 7.07e-12 68.2
Msa1136620 MtrunA17_Chr3g0089811 29.936 157 104 5 157 308 630 785 1.46e-11 67.4
Msa1136620 MtrunA17_Chr2g0309161 37.778 90 53 1 306 395 41 127 8.81e-12 62.8
Msa1136620 MtrunA17_Chr1g0169941 42.169 83 47 1 1 82 96 178 1.03e-11 66.2
Msa1136620 MtrunA17_Chr7g0257551 43.373 83 46 1 1 82 259 341 1.06e-11 66.6
Msa1136620 MtrunA17_Chr3g0113791 50.000 72 34 2 12 81 315 386 1.29e-11 67.4
Msa1136620 MtrunA17_Chr3g0085521 27.402 281 138 11 149 368 604 879 1.35e-11 67.4
Msa1136620 MtrunA17_Chr5g0415551 41.250 80 46 1 7 85 192 271 1.43e-11 67.0
Msa1136620 MtrunA17_Chr5g0415551 29.524 210 113 8 157 361 488 667 1.88e-11 66.6
Msa1136620 MtrunA17_Chr3g0113481 50.000 72 34 2 12 81 315 386 1.51e-11 67.0
Msa1136620 MtrunA17_Chr8g0348931 37.647 85 50 1 3 84 329 413 1.53e-11 67.4
Msa1136620 MtrunA17_Chr3g0085451 22.143 420 239 17 8 389 301 670 1.58e-11 67.0
Msa1136620 MtrunA17_Chr3g0090651 38.372 86 48 2 3 84 322 406 1.66e-11 67.0
Msa1136620 MtrunA17_Chr3g0113781 50.000 72 34 2 12 81 110 181 1.73e-11 66.6
Msa1136620 MtrunA17_Chr3g0085171 25.253 297 168 9 87 368 542 799 1.89e-11 67.0
Msa1136620 MtrunA17_Chr3g0084031 26.804 291 171 9 87 368 568 825 1.97e-11 67.0
Msa1136620 MtrunA17_Chr3g0084031 36.905 84 52 1 1 83 323 406 3.52e-11 65.9
Msa1136620 MtrunA17_Chr6g0468131 24.398 332 199 8 67 394 69 352 2.02e-11 65.5
Msa1136620 MtrunA17_Chr3g0089421 27.807 187 129 6 154 337 629 812 2.28e-11 66.6
Msa1136620 MtrunA17_Chr3g0085131 28.505 214 114 7 157 365 618 797 2.79e-11 66.2
Msa1136620 MtrunA17_Chr4g0010261 47.297 74 37 2 12 84 318 390 3.00e-11 66.2
Msa1136620 MtrunA17_Chr3g0089931 35.632 87 53 1 2 85 306 392 3.63e-11 65.5
Msa1136620 MtrunA17_Chr3g0085331 31.624 117 71 2 1 116 322 430 4.58e-11 65.9
Msa1136620 MtrunA17_Chr3g0085711 30.097 206 133 7 157 355 188 389 4.71e-11 65.5
Msa1136620 MtrunA17_Chr8g0352831 40.000 85 50 1 1 84 331 415 4.98e-11 65.5
Msa1136620 MtrunA17_Chr4g0051651 35.165 91 56 2 1 88 348 438 5.28e-11 65.1
Msa1136620 MtrunA17_Chr4g0008461 36.170 141 78 6 159 292 614 749 5.34e-11 65.5
Msa1136620 MtrunA17_Chr3g0087701 41.026 78 45 1 9 85 313 390 5.79e-11 65.5
Msa1136620 MtrunA17_Chr3g0087701 29.167 216 126 5 154 368 617 806 9.74e-11 64.7
Msa1136620 MtrunA17_Chr2g0316291 29.771 131 80 2 270 391 958 1085 7.10e-11 65.1
Msa1136620 MtrunA17_Chr3g0083621 38.298 94 55 3 1 92 332 424 7.93e-11 65.1
Msa1136620 MtrunA17_Chr3g0085111 28.000 225 121 7 154 368 616 809 8.19e-11 64.7
Msa1136620 MtrunA17_Chr1g0168901 31.280 211 111 9 157 361 599 781 9.15e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 98 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTCAATCATTGACATTT+AGG 0.123566 7_4:+5263837 Msa1136620:CDS
ACATTCACGATATTGAAATT+AGG 0.181419 7_4:+5264077 Msa1136620:CDS
CCTTCAATCATTGACATTTA+GGG 0.209415 7_4:+5263838 Msa1136620:CDS
TCTTGAAGTTGTTGGGTAAA+AGG 0.218295 7_4:-5263367 None:intergenic
TCAAGTTTACCTCCTCAAAT+AGG 0.240358 7_4:+5263094 Msa1136620:CDS
TTCAAGCGTATCAAATTATT+AGG 0.275241 7_4:-5263031 None:intergenic
TTATTTAAAGAAAGAGCTTT+TGG 0.286903 7_4:+5262164 Msa1136620:CDS
GATATTGAGACAGATGTATT+TGG 0.287975 7_4:+5262580 Msa1136620:CDS
CATTCACGATATTGAAATTA+GGG 0.299370 7_4:+5264078 Msa1136620:CDS
ACATCCTTACCAAACTCTTT+AGG 0.310688 7_4:+5263875 Msa1136620:CDS
ATAAGGTTTCCTAAAGAGTT+TGG 0.313161 7_4:-5263884 None:intergenic
AAACGATGTGAAATGGAAAT+AGG 0.331322 7_4:+5264022 Msa1136620:CDS
CCTAGTGTTATTGTTGTAAG+AGG 0.344484 7_4:-5262257 None:intergenic
AGGCTTGTCTTCCCTCAAAA+AGG 0.352326 7_4:-5264410 None:intergenic
CACATAATTCTTGAAGTTGT+TGG 0.361498 7_4:-5263375 None:intergenic
TCTTTACGTTCTACCTCATT+TGG 0.366858 7_4:-5262188 None:intergenic
CAAAGGAAGAGGGTTCCTTT+TGG 0.382746 7_4:+5263159 Msa1136620:CDS
CTCTTTAGGAAACCTTATCT+TGG 0.390837 7_4:+5263889 Msa1136620:CDS
GGATGAAGAGTCCCAGTTGC+AGG 0.391860 7_4:+5263312 Msa1136620:CDS
CAAGTTTACCTCCTCAAATA+GGG 0.394202 7_4:+5263095 Msa1136620:CDS
ACATAATTCTTGAAGTTGTT+GGG 0.395821 7_4:-5263374 None:intergenic
CTGTCAAGGAAAGCAAACTA+TGG 0.407358 7_4:+5262321 Msa1136620:CDS
AGCTATCTAACAAATATTGT+TGG 0.411949 7_4:+5262138 Msa1136620:CDS
AAGAGTTTGGTAAGGATGTC+AGG 0.418562 7_4:-5263871 None:intergenic
CTTTAGTATCTCCTTTCCTA+TGG 0.420886 7_4:-5262219 None:intergenic
AATTCCATGTTCACTTTCCA+TGG 0.439729 7_4:-5265487 None:intergenic
TGGGGATGCTCAGAAGTAGA+AGG 0.442470 7_4:+5263785 Msa1136620:intron
TTTGGTAAGGATGTCAGGTT+TGG 0.443117 7_4:-5263866 None:intergenic
GCTATCTAACAAATATTGTT+GGG 0.457601 7_4:+5262139 Msa1136620:CDS
TAGACTCACGCAGTTATTCA+AGG 0.463922 7_4:-5263071 None:intergenic
GTTGGAGAAACGATGTGAAA+TGG 0.470292 7_4:+5264015 Msa1136620:CDS
ATTTCTTTGTTCATCCCTAT+CGG 0.470564 7_4:+5264286 Msa1136620:CDS
GATTTATCAATGTCATGAGT+TGG 0.472267 7_4:+5263997 Msa1136620:CDS
GCGCTTTAAAAGAGAGGAAA+AGG 0.476179 7_4:+5262289 Msa1136620:CDS
TGAACAATTTGCGGTTGTCA+TGG 0.484735 7_4:+5263290 Msa1136620:CDS
TTGTTTGTATCTCAATCCCT+TGG 0.487133 7_4:-5264440 None:intergenic
CATGTGATAGCAAGCTCTGA+TGG 0.487267 7_4:+5265451 Msa1136620:CDS
AGGAGATACTAAAGAAGTGC+AGG 0.489275 7_4:+5262228 Msa1136620:CDS
TGGACTCTTTCTAATGTACT+AGG 0.491261 7_4:-5262697 None:intergenic
ACTTTGAGCATGTATGTAGT+TGG 0.492682 7_4:+5263136 Msa1136620:CDS
GAAGTCAACTTCCCTATTTG+AGG 0.496701 7_4:-5263106 None:intergenic
GTAAGCACGTGAACAATTTG+CGG 0.501094 7_4:+5263281 Msa1136620:CDS
TTTGTATCTCAATCCCTTGG+TGG 0.501557 7_4:-5264437 None:intergenic
TTATGTGTGGTAGGATATGT+AGG 0.502170 7_4:+5263391 Msa1136620:CDS
TATGTAGTTGGCAAAGGAAG+AGG 0.504205 7_4:+5263148 Msa1136620:CDS
ATACATGCTCAAAGTCCTCA+TGG 0.505478 7_4:-5263128 None:intergenic
TGCTCAATCAATTTCAGAAG+AGG 0.509904 7_4:+5262645 Msa1136620:CDS
ACTGTCCTAATTCTGCCAAA+AGG 0.510976 7_4:-5263174 None:intergenic
CCCTAAATGTCAATGATTGA+AGG 0.519001 7_4:-5263838 None:intergenic
CTCAATCCCTTGGTGGTCGA+AGG 0.519964 7_4:-5264430 None:intergenic
GAAATGGAAATAGGAGAGCC+TGG 0.523223 7_4:+5264031 Msa1136620:CDS
TGAAAAGACAATTTCACCTA+AGG 0.532236 7_4:+5262732 Msa1136620:CDS
CGTAAAGAGCTTGTGGCCAT+AGG 0.533303 7_4:+5262203 Msa1136620:CDS
CTTCAAGAATTATGTGTGGT+AGG 0.534743 7_4:+5263382 Msa1136620:CDS
AAGAAATGACAAATGCAAGA+AGG 0.535671 7_4:-5264270 None:intergenic
TTTGAAGTGACATCTTCAAT+CGG 0.536067 7_4:+5262880 Msa1136620:CDS
AGAAATGACAAATGCAAGAA+GGG 0.540977 7_4:-5264269 None:intergenic
GTTTCCTAAAGAGTTTGGTA+AGG 0.545487 7_4:-5263879 None:intergenic
GCTATCACATGAGTTATAGC+TGG 0.546681 7_4:-5265439 None:intergenic
AAAGGAGTGGCCCTCTGTCA+AGG 0.546918 7_4:+5262307 Msa1136620:CDS
GTGAGGCTTTGAATGCTCGT+TGG 0.547232 7_4:-5263956 None:intergenic
AGCATGTATGTAGTTGGCAA+AGG 0.553359 7_4:+5263142 Msa1136620:CDS
CCTAAATGTCAATGATTGAA+GGG 0.562048 7_4:-5263837 None:intergenic
TAGTTTGCTTTCCTTGACAG+AGG 0.571448 7_4:-5262318 None:intergenic
GATAGCAAGCTCTGATGGAA+AGG 0.571710 7_4:+5265456 Msa1136620:CDS
TTAAAGATTTCAAACTAGTG+AGG 0.572972 7_4:-5263973 None:intergenic
CATATGAATTGTTGTTCCAG+TGG 0.576436 7_4:-5265416 None:intergenic
GAACAATTTGCGGTTGTCAT+GGG 0.576680 7_4:+5263291 Msa1136620:CDS
AGTTTGCTTTCCTTGACAGA+GGG 0.577397 7_4:-5262317 None:intergenic
GATGCTCAGAAGTAGAAGGT+TGG 0.577833 7_4:+5263789 Msa1136620:intron
CACGTGCTTACTCGACATGT+TGG 0.578479 7_4:-5263269 None:intergenic
CCTCTTACAACAATAACACT+AGG 0.586148 7_4:+5262257 Msa1136620:CDS
CAAACACATTACCTCCGATA+GGG 0.588922 7_4:-5264300 None:intergenic
AGAGCTTGTGGCCATAGGAA+AGG 0.589507 7_4:+5262208 Msa1136620:CDS
CCGTGTCAGCTACAGAAGCT+TGG 0.593851 7_4:-5265535 None:intergenic
ATATTGAAATTAGGGAACGC+AGG 0.594400 7_4:+5264086 Msa1136620:CDS
TATTGAAATTAGGGAACGCA+GGG 0.598987 7_4:+5264087 Msa1136620:CDS
ATGGAAAGGAAGATCAGCCA+TGG 0.600773 7_4:+5265470 Msa1136620:CDS
GGAGATACTAAAGAAGTGCA+GGG 0.601492 7_4:+5262229 Msa1136620:CDS
GACAAGCCTTCGACCACCAA+GGG 0.602271 7_4:+5264424 Msa1136620:CDS
GTCAACTTCCCTATTTGAGG+AGG 0.602783 7_4:-5263103 None:intergenic
TCTCATGCGCTTTAAAAGAG+AGG 0.603764 7_4:+5262283 Msa1136620:CDS
TCAGCCATGGAAAGTGAACA+TGG 0.604825 7_4:+5265483 Msa1136620:CDS
AGAAGTAGAAGGTTGGAATG+AGG 0.610545 7_4:+5263796 Msa1136620:intron
AGCTTTGATATATCATGCGA+AGG 0.615898 7_4:-5262119 None:intergenic
GGAAATCAAATCCAAATCTG+TGG 0.617800 7_4:-5264248 None:intergenic
TCTTTGTTCATCCCTATCGG+AGG 0.623769 7_4:+5264289 Msa1136620:CDS
TAGGAGAGCCTGGAGAGCAA+TGG 0.627262 7_4:+5264041 Msa1136620:CDS
ACAAACACATTACCTCCGAT+AGG 0.631375 7_4:-5264301 None:intergenic
ATGTAGTTGGCAAAGGAAGA+GGG 0.632964 7_4:+5263149 Msa1136620:CDS
GGTAGAACGTAAAGAGCTTG+TGG 0.642029 7_4:+5262196 Msa1136620:CDS
AGACAAGCCTTCGACCACCA+AGG 0.649441 7_4:+5264423 Msa1136620:CDS
GTTGGAAGAGAAATCAACTT+CGG 0.652226 7_4:-5263938 None:intergenic
TGAACATGGAATTTGCAGCA+AGG 0.663342 7_4:+5265497 Msa1136620:CDS
GAGATACTAAAGAAGTGCAG+GGG 0.677114 7_4:+5262230 Msa1136620:CDS
ACAACTTCAAGAATTATGTG+TGG 0.699684 7_4:+5263378 Msa1136620:CDS
TTAAAAGAGAGGAAAAGGAG+TGG 0.710110 7_4:+5262294 Msa1136620:CDS
TAGGGAAGTTGACTTCCATG+AGG 0.734753 7_4:+5263113 Msa1136620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTTTTCATTTTTAAATTA+CGG + chr7_4:5263578-5263597 Msa1136620:intron 10.0%
!! TTTATTGTATAATATTTGAT+TGG + chr7_4:5264685-5264704 Msa1136620:intron 10.0%
!! TTATACAATAAATCTAAACT+AGG - chr7_4:5264677-5264696 None:intergenic 15.0%
!!! TTTTATGTTTTTTGTTAGAA+AGG + chr7_4:5265176-5265195 Msa1136620:intron 15.0%
!!! TTATTTAAAGAAAGAGCTTT+TGG + chr7_4:5262164-5262183 Msa1136620:CDS 20.0%
!! TATTTCATCCAATAAAATGT+TGG + chr7_4:5262498-5262517 Msa1136620:intron 20.0%
!! AGAAAGAAAATTGAATACAT+TGG - chr7_4:5262836-5262855 None:intergenic 20.0%
!!! TCAAATTATTAGGCAATTTT+TGG - chr7_4:5263024-5263043 None:intergenic 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr7_4:5265010-5265029 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr7_4:5265009-5265028 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr7_4:5264762-5264781 Msa1136620:intron 20.0%
!! ATTGTAACGTAATAACTTAT+GGG - chr7_4:5264820-5264839 None:intergenic 20.0%
!! AATTGTAACGTAATAACTTA+TGG - chr7_4:5264821-5264840 None:intergenic 20.0%
!! TAAGTTATTACGTTACAATT+TGG + chr7_4:5264821-5264840 Msa1136620:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr7_4:5264981-5265000 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr7_4:5264981-5265000 Msa1136620:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr7_4:5264762-5264781 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr7_4:5265009-5265028 Msa1136620:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr7_4:5265010-5265029 Msa1136620:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr7_4:5264762-5264781 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr7_4:5265009-5265028 Msa1136620:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr7_4:5265010-5265029 Msa1136620:intron 20.0%
!! AATAGGCTTAATTAATGATT+TGG - chr7_4:5265128-5265147 None:intergenic 20.0%
! AGCTATCTAACAAATATTGT+TGG + chr7_4:5262138-5262157 Msa1136620:CDS 25.0%
! GCTATCTAACAAATATTGTT+GGG + chr7_4:5262139-5262158 Msa1136620:CDS 25.0%
!!! AAACATTGTCTCATTTTAAC+TGG - chr7_4:5262404-5262423 None:intergenic 25.0%
! CTGCTTGTTTATTATTCTTT+GGG - chr7_4:5262446-5262465 None:intergenic 25.0%
! ACTGCTTGTTTATTATTCTT+TGG - chr7_4:5262447-5262466 None:intergenic 25.0%
!!! ATATTGGAGATCATTTTTTC+AGG + chr7_4:5262558-5262577 Msa1136620:intron 25.0%
!! TTGTCTTTTCATATGAGATA+TGG - chr7_4:5262723-5262742 None:intergenic 25.0%
! AGAAAATTGAATACATTGGA+TGG - chr7_4:5262832-5262851 None:intergenic 25.0%
!!! TGAAGTGTTTTTAAGGTAAT+TGG + chr7_4:5262908-5262927 Msa1136620:intron 25.0%
! TAAATTCCACAACTTACATA+TGG - chr7_4:5262969-5262988 None:intergenic 25.0%
! TTCAAGCGTATCAAATTATT+AGG - chr7_4:5263034-5263053 None:intergenic 25.0%
! ACATAATTCTTGAAGTTGTT+GGG - chr7_4:5263377-5263396 None:intergenic 25.0%
! TTGCAATTTATGAGACTTAA+TGG - chr7_4:5263466-5263485 None:intergenic 25.0%
! TGAACTAACAACATGATAAA+TGG + chr7_4:5263627-5263646 Msa1136620:intron 25.0%
! TTAAAGATTTCAAACTAGTG+AGG - chr7_4:5263976-5263995 None:intergenic 25.0%
! ACATTCACGATATTGAAATT+AGG + chr7_4:5264077-5264096 Msa1136620:CDS 25.0%
! CATTCACGATATTGAAATTA+GGG + chr7_4:5264078-5264097 Msa1136620:CDS 25.0%
! CAACAAATATTATTGAGAGT+GGG - chr7_4:5264139-5264158 None:intergenic 25.0%
! ACAACAAATATTATTGAGAG+TGG - chr7_4:5264140-5264159 None:intergenic 25.0%
! GAAACTAGAGATTAAACATT+CGG - chr7_4:5264595-5264614 None:intergenic 25.0%
!!! GATTGGCTTAATTAATGATT+TGG + chr7_4:5264702-5264721 Msa1136620:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr7_4:5265041-5265060 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr7_4:5265040-5265059 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr7_4:5264733-5264752 Msa1136620:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr7_4:5265041-5265060 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr7_4:5265040-5265059 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr7_4:5264733-5264752 Msa1136620:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr7_4:5264980-5264999 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr7_4:5264852-5264871 Msa1136620:intron 25.0%
! GAAACCAACAAATAAGTTAA+GGG - chr7_4:5264950-5264969 None:intergenic 25.0%
! CCATAAGTTATTAGAGTTAA+GGG - chr7_4:5264921-5264940 None:intergenic 25.0%
! CCTTAACTCTAATAACTTAT+GGG + chr7_4:5264919-5264938 Msa1136620:intron 25.0%
! GAAACCAACAAATAAGTTAA+GGG + chr7_4:5264950-5264969 Msa1136620:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr7_4:5264852-5264871 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr7_4:5264980-5264999 Msa1136620:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr7_4:5264733-5264752 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr7_4:5265040-5265059 Msa1136620:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr7_4:5265041-5265060 Msa1136620:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr7_4:5264733-5264752 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr7_4:5265040-5265059 Msa1136620:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr7_4:5265041-5265060 Msa1136620:intron 25.0%
! TAGCACAACATAAATCAAAT+AGG - chr7_4:5265145-5265164 None:intergenic 25.0%
! ATTAATGAGTCCAATTCTAA+GGG + chr7_4:5265337-5265356 Msa1136620:intron 25.0%
!! ATTTTTCTGACCTTAAACAA+AGG - chr7_4:5265396-5265415 None:intergenic 25.0%
GATATTGAGACAGATGTATT+TGG + chr7_4:5262580-5262599 Msa1136620:CDS 30.0%
! TCTTTTCATATGAGATATGG+TGG - chr7_4:5262720-5262739 None:intergenic 30.0%
TGAAAAGACAATTTCACCTA+AGG + chr7_4:5262732-5262751 Msa1136620:CDS 30.0%
TACACAAGATCATATCGTAT+CGG + chr7_4:5262796-5262815 Msa1136620:intron 30.0%
! TTTGAAGTGACATCTTCAAT+CGG + chr7_4:5262880-5262899 Msa1136620:CDS 30.0%
!! GGTCATTTGAAGTGTTTTTA+AGG + chr7_4:5262901-5262920 Msa1136620:intron 30.0%
CACATAATTCTTGAAGTTGT+TGG - chr7_4:5263378-5263397 None:intergenic 30.0%
ACAACTTCAAGAATTATGTG+TGG + chr7_4:5263378-5263397 Msa1136620:CDS 30.0%
GGCTGTAAATGTATTAAAGT+AGG - chr7_4:5263445-5263464 None:intergenic 30.0%
CCTAAATGTCAATGATTGAA+GGG - chr7_4:5263840-5263859 None:intergenic 30.0%
CCTTCAATCATTGACATTTA+GGG + chr7_4:5263838-5263857 Msa1136620:CDS 30.0%
ATAAGGTTTCCTAAAGAGTT+TGG - chr7_4:5263887-5263906 None:intergenic 30.0%
!! CTAGTTTTTGAACCAAGATA+AGG - chr7_4:5263904-5263923 None:intergenic 30.0%
GATTTATCAATGTCATGAGT+TGG + chr7_4:5263997-5264016 Msa1136620:CDS 30.0%
AAACGATGTGAAATGGAAAT+AGG + chr7_4:5264022-5264041 Msa1136620:CDS 30.0%
CTTTCTATTGTTATGACTCT+TGG + chr7_4:5264169-5264188 Msa1136620:intron 30.0%
AGAAATGACAAATGCAAGAA+GGG - chr7_4:5264272-5264291 None:intergenic 30.0%
AAGAAATGACAAATGCAAGA+AGG - chr7_4:5264273-5264292 None:intergenic 30.0%
ATTTCTTTGTTCATCCCTAT+CGG + chr7_4:5264286-5264305 Msa1136620:CDS 30.0%
!!! TGTTTTCCTTTTGTTTTCCA+GGG + chr7_4:5264372-5264391 Msa1136620:intron 30.0%
!! AATAACAGTCAGAGTTTTGA+TGG - chr7_4:5264488-5264507 None:intergenic 30.0%
!!! CTTGTTTCTATTTTCCAACT+TGG + chr7_4:5264518-5264537 Msa1136620:intron 30.0%
AAGTACAGATTCTAGCATTT+AGG + chr7_4:5264566-5264585 Msa1136620:intron 30.0%
TTCTGCCTTTGTGTTTATTT+AGG + chr7_4:5264651-5264670 Msa1136620:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr7_4:5264841-5264860 Msa1136620:intron 30.0%
CGAAACCAACAAATAAGTTA+AGG - chr7_4:5264949-5264968 None:intergenic 30.0%
!!! CTTATTTGTTGGTTTCGTTT+TGG + chr7_4:5264883-5264902 Msa1136620:intron 30.0%
CCCTTAACTCTAATAACTTA+TGG + chr7_4:5264918-5264937 Msa1136620:intron 30.0%
CCCATAAGTTATTAGAGTTA+AGG - chr7_4:5264922-5264941 None:intergenic 30.0%
!!! CTTATTTGTTGGTTTCGTTT+TGG - chr7_4:5264883-5264902 None:intergenic 30.0%
CGAAACCAACAAATAAGTTA+AGG + chr7_4:5264949-5264968 Msa1136620:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr7_4:5264841-5264860 None:intergenic 30.0%
!!! GTTTTTTGTTAGAAAGGAGA+AGG + chr7_4:5265182-5265201 Msa1136620:intron 30.0%
GATTTCACTTGCAAATCAAA+AGG - chr7_4:5265252-5265271 None:intergenic 30.0%
ACATTGTGATAGATAAACCA+AGG + chr7_4:5265314-5265333 Msa1136620:intron 30.0%
GATTAATGAGTCCAATTCTA+AGG + chr7_4:5265336-5265355 Msa1136620:intron 30.0%
! ATTAATTCCGCCTTTGTTTA+AGG + chr7_4:5265383-5265402 Msa1136620:intron 30.0%
! AGCTTTGATATATCATGCGA+AGG - chr7_4:5262122-5262141 None:intergenic 35.0%
TCTTTACGTTCTACCTCATT+TGG - chr7_4:5262191-5262210 None:intergenic 35.0%
CTTTAGTATCTCCTTTCCTA+TGG - chr7_4:5262222-5262241 None:intergenic 35.0%
! CCTAGTGTTATTGTTGTAAG+AGG - chr7_4:5262260-5262279 None:intergenic 35.0%
CCTCTTACAACAATAACACT+AGG + chr7_4:5262257-5262276 Msa1136620:CDS 35.0%
TTAAAAGAGAGGAAAAGGAG+TGG + chr7_4:5262294-5262313 Msa1136620:CDS 35.0%
AGCAGTTTCTAATTGAGCTT+TGG + chr7_4:5262461-5262480 Msa1136620:intron 35.0%
!! GTTTCTAATTGAGCTTTGGA+TGG + chr7_4:5262465-5262484 Msa1136620:intron 35.0%
ATCCAATAAAATGTTGGACG+AGG + chr7_4:5262504-5262523 Msa1136620:intron 35.0%
! TTCCTCGTCCAACATTTTAT+TGG - chr7_4:5262509-5262528 None:intergenic 35.0%
AGACGTGGAACGAATTATAT+TGG + chr7_4:5262542-5262561 Msa1136620:intron 35.0%
TGCTCAATCAATTTCAGAAG+AGG + chr7_4:5262645-5262664 Msa1136620:CDS 35.0%
TGGACTCTTTCTAATGTACT+AGG - chr7_4:5262700-5262719 None:intergenic 35.0%
TCACCTAAGGTAGATTCAAT+CGG + chr7_4:5262745-5262764 Msa1136620:intron 35.0%
TCTTTCTTTACATGTGCTTC+AGG + chr7_4:5262849-5262868 Msa1136620:intron 35.0%
AGGTAATTGGATCTTTCTCA+CGG + chr7_4:5262921-5262940 Msa1136620:intron 35.0%
CACAACTTACATATGGATTC+TGG - chr7_4:5262962-5262981 None:intergenic 35.0%
CAGAATCCATATGTAAGTTG+TGG + chr7_4:5262960-5262979 Msa1136620:intron 35.0%
TCAAGTTTACCTCCTCAAAT+AGG + chr7_4:5263094-5263113 Msa1136620:CDS 35.0%
CAAGTTTACCTCCTCAAATA+GGG + chr7_4:5263095-5263114 Msa1136620:CDS 35.0%
ACTTTGAGCATGTATGTAGT+TGG + chr7_4:5263136-5263155 Msa1136620:CDS 35.0%
TCTTGAAGTTGTTGGGTAAA+AGG - chr7_4:5263370-5263389 None:intergenic 35.0%
CTTCAAGAATTATGTGTGGT+AGG + chr7_4:5263382-5263401 Msa1136620:CDS 35.0%
TTATGTGTGGTAGGATATGT+AGG + chr7_4:5263391-5263410 Msa1136620:CDS 35.0%
! AGACATCCATTCTAGGAAAT+GGG - chr7_4:5263419-5263438 None:intergenic 35.0%
! TAGACATCCATTCTAGGAAA+TGG - chr7_4:5263420-5263439 None:intergenic 35.0%
TTTACAACACCTCCCAAAAT+TGG + chr7_4:5263492-5263511 Msa1136620:intron 35.0%
TTACAACACCTCCCAAAATT+GGG + chr7_4:5263493-5263512 Msa1136620:intron 35.0%
! AAGGTAGTTTCCCCAATTTT+GGG - chr7_4:5263507-5263526 None:intergenic 35.0%
TTTGGATTGAAGGTTTAGGA+GGG - chr7_4:5263746-5263765 None:intergenic 35.0%
TGTGTTTGGATTGAAGGTTT+AGG - chr7_4:5263750-5263769 None:intergenic 35.0%
ATGTTCAATTTGGGTGTGTT+TGG - chr7_4:5263764-5263783 None:intergenic 35.0%
ACACACCCAAATTGAACATT+TGG + chr7_4:5263765-5263784 Msa1136620:intron 35.0%
CACACCCAAATTGAACATTT+GGG + chr7_4:5263766-5263785 Msa1136620:intron 35.0%
ACACCCAAATTGAACATTTG+GGG + chr7_4:5263767-5263786 Msa1136620:intron 35.0%
CATCCCCAAATGTTCAATTT+GGG - chr7_4:5263773-5263792 None:intergenic 35.0%
CCCTTCAATCATTGACATTT+AGG + chr7_4:5263837-5263856 Msa1136620:CDS 35.0%
CCCTAAATGTCAATGATTGA+AGG - chr7_4:5263841-5263860 None:intergenic 35.0%
ACATCCTTACCAAACTCTTT+AGG + chr7_4:5263875-5263894 Msa1136620:CDS 35.0%
GTTTCCTAAAGAGTTTGGTA+AGG - chr7_4:5263882-5263901 None:intergenic 35.0%
! CTCTTTAGGAAACCTTATCT+TGG + chr7_4:5263889-5263908 Msa1136620:CDS 35.0%
GTTGGAAGAGAAATCAACTT+CGG - chr7_4:5263941-5263960 None:intergenic 35.0%
ATATTGAAATTAGGGAACGC+AGG + chr7_4:5264086-5264105 Msa1136620:CDS 35.0%
TATTGAAATTAGGGAACGCA+GGG + chr7_4:5264087-5264106 Msa1136620:CDS 35.0%
!!! TCTTTTTTTTTCTTCGCAGG+AGG + chr7_4:5264209-5264228 Msa1136620:intron 35.0%
!!! GCAGGAGGTTTTTATTTTGA+AGG + chr7_4:5264224-5264243 Msa1136620:intron 35.0%
!! ATTTTGAAGGACCACAGATT+TGG + chr7_4:5264237-5264256 Msa1136620:CDS 35.0%
GGAAATCAAATCCAAATCTG+TGG - chr7_4:5264251-5264270 None:intergenic 35.0%
!!! GTGTTTTCCTTTTGTTTTCC+AGG + chr7_4:5264371-5264390 Msa1136620:intron 35.0%
! TGAAGCATGATTCCTTTTTG+AGG + chr7_4:5264398-5264417 Msa1136620:CDS 35.0%
! GAAGCATGATTCCTTTTTGA+GGG + chr7_4:5264399-5264418 Msa1136620:CDS 35.0%
TTGTTTGTATCTCAATCCCT+TGG - chr7_4:5264443-5264462 None:intergenic 35.0%
AAGATGATGAAGAACCAAGT+TGG - chr7_4:5264535-5264554 None:intergenic 35.0%
TACAGATTCTAGCATTTAGG+TGG + chr7_4:5264569-5264588 Msa1136620:intron 35.0%
CTAGGCCTAAATAAACACAA+AGG - chr7_4:5264659-5264678 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr7_4:5264722-5264741 Msa1136620:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr7_4:5264722-5264741 Msa1136620:intron 35.0%
TGGTCCCTTAACTTATTTGT+TGG + chr7_4:5264872-5264891 Msa1136620:intron 35.0%
TAGAGTTAAGGGAGTAGTTT+GGG - chr7_4:5264910-5264929 None:intergenic 35.0%
TTAGAGTTAAGGGAGTAGTT+TGG - chr7_4:5264911-5264930 None:intergenic 35.0%
TGGTCCCTTAACTTATTTGT+TGG - chr7_4:5264872-5264891 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr7_4:5264722-5264741 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr7_4:5264722-5264741 None:intergenic 35.0%
TTCACTTGCAAATCAAAAGG+TGG - chr7_4:5265249-5265268 None:intergenic 35.0%
GAATTGGACTCATTAATCCT+TGG - chr7_4:5265334-5265353 None:intergenic 35.0%
TCTGAATGAACCCTTAGAAT+TGG - chr7_4:5265350-5265369 None:intergenic 35.0%
GCGGAATTAATTGATGTAAC+AGG - chr7_4:5265374-5265393 None:intergenic 35.0%
TTTCTGACCTTAAACAAAGG+CGG - chr7_4:5265393-5265412 None:intergenic 35.0%
TTAAGGTCAGAAAAATCCAC+TGG + chr7_4:5265400-5265419 Msa1136620:intron 35.0%
! CATATGAATTGTTGTTCCAG+TGG - chr7_4:5265419-5265438 None:intergenic 35.0%
AATTCCATGTTCACTTTCCA+TGG - chr7_4:5265490-5265509 None:intergenic 35.0%
! AAGAGCTTTTGGACCAAATG+AGG + chr7_4:5262175-5262194 Msa1136620:CDS 40.0%
! AGGAGATACTAAAGAAGTGC+AGG + chr7_4:5262228-5262247 Msa1136620:CDS 40.0%
! GGAGATACTAAAGAAGTGCA+GGG + chr7_4:5262229-5262248 Msa1136620:CDS 40.0%
! GAGATACTAAAGAAGTGCAG+GGG + chr7_4:5262230-5262249 Msa1136620:CDS 40.0%
!! TCTCATGCGCTTTAAAAGAG+AGG + chr7_4:5262283-5262302 Msa1136620:CDS 40.0%
!! GCGCTTTAAAAGAGAGGAAA+AGG + chr7_4:5262289-5262308 Msa1136620:CDS 40.0%
! AGTTTGCTTTCCTTGACAGA+GGG - chr7_4:5262320-5262339 None:intergenic 40.0%
!! TAGTTTGCTTTCCTTGACAG+AGG - chr7_4:5262321-5262340 None:intergenic 40.0%
CTGTCAAGGAAAGCAAACTA+TGG + chr7_4:5262321-5262340 Msa1136620:CDS 40.0%
TTTGGGAAATAGCGCACATA+AGG - chr7_4:5262429-5262448 None:intergenic 40.0%
!! ATTGAGCTTTGGATGGCTAA+TGG + chr7_4:5262472-5262491 Msa1136620:intron 40.0%
ATGTTGGACGAGGAAGATAT+TGG + chr7_4:5262514-5262533 Msa1136620:intron 40.0%
CACCTAAGGTAGATTCAATC+GGG + chr7_4:5262746-5262765 Msa1136620:intron 40.0%
ATCCCGATTGAATCTACCTT+AGG - chr7_4:5262751-5262770 None:intergenic 40.0%
TGTGTAGCATCAAATCACTG+AGG + chr7_4:5262770-5262789 Msa1136620:intron 40.0%
TAGACTCACGCAGTTATTCA+AGG - chr7_4:5263074-5263093 None:intergenic 40.0%
GAAGTCAACTTCCCTATTTG+AGG - chr7_4:5263109-5263128 None:intergenic 40.0%
ATACATGCTCAAAGTCCTCA+TGG - chr7_4:5263131-5263150 None:intergenic 40.0%
AGCATGTATGTAGTTGGCAA+AGG + chr7_4:5263142-5263161 Msa1136620:CDS 40.0%
TATGTAGTTGGCAAAGGAAG+AGG + chr7_4:5263148-5263167 Msa1136620:CDS 40.0%
ATGTAGTTGGCAAAGGAAGA+GGG + chr7_4:5263149-5263168 Msa1136620:CDS 40.0%
ACTGTCCTAATTCTGCCAAA+AGG - chr7_4:5263177-5263196 None:intergenic 40.0%
! CTACACTTTTCACTCTCTCA+AGG - chr7_4:5263234-5263253 None:intergenic 40.0%
GTAAGCACGTGAACAATTTG+CGG + chr7_4:5263281-5263300 Msa1136620:CDS 40.0%
TGAACAATTTGCGGTTGTCA+TGG + chr7_4:5263290-5263309 Msa1136620:CDS 40.0%
GAACAATTTGCGGTTGTCAT+GGG + chr7_4:5263291-5263310 Msa1136620:CDS 40.0%
! CTCAACATTTTCCTGCAACT+GGG - chr7_4:5263326-5263345 None:intergenic 40.0%
TAGGTTCCCATTTCCTAGAA+TGG + chr7_4:5263410-5263429 Msa1136620:intron 40.0%
TAGGACTAGACATCCATTCT+AGG - chr7_4:5263426-5263445 None:intergenic 40.0%
TACAACACCTCCCAAAATTG+GGG + chr7_4:5263494-5263513 Msa1136620:intron 40.0%
! GAAGGTAGTTTCCCCAATTT+TGG - chr7_4:5263508-5263527 None:intergenic 40.0%
GTCTGTTTGGATAGGGTTTA+GGG + chr7_4:5263535-5263554 Msa1136620:intron 40.0%
TCTGTTTGGATAGGGTTTAG+GGG + chr7_4:5263536-5263555 Msa1136620:intron 40.0%
TTGGATTGAAGGTTTAGGAG+GGG - chr7_4:5263745-5263764 None:intergenic 40.0%
GTTTGGATTGAAGGTTTAGG+AGG - chr7_4:5263747-5263766 None:intergenic 40.0%
TTTGGGTGTGTTTGGATTGA+AGG - chr7_4:5263756-5263775 None:intergenic 40.0%
GCATCCCCAAATGTTCAATT+TGG - chr7_4:5263774-5263793 None:intergenic 40.0%
AGAAGTAGAAGGTTGGAATG+AGG + chr7_4:5263796-5263815 Msa1136620:intron 40.0%
TTTGGTAAGGATGTCAGGTT+TGG - chr7_4:5263869-5263888 None:intergenic 40.0%
AAGAGTTTGGTAAGGATGTC+AGG - chr7_4:5263874-5263893 None:intergenic 40.0%
GTTGGAGAAACGATGTGAAA+TGG + chr7_4:5264015-5264034 Msa1136620:CDS 40.0%
! ATTTTTGACCATTGCTCTCC+AGG - chr7_4:5264052-5264071 None:intergenic 40.0%
!!! CGCTCTTTTTTTTTCTTCGC+AGG + chr7_4:5264206-5264225 Msa1136620:intron 40.0%
CAAACACATTACCTCCGATA+GGG - chr7_4:5264303-5264322 None:intergenic 40.0%
ACAAACACATTACCTCCGAT+AGG - chr7_4:5264304-5264323 None:intergenic 40.0%
ATCGGAGGTAATGTGTTTGT+TGG + chr7_4:5264304-5264323 Msa1136620:intron 40.0%
TCAGAACCCTGGAAAACAAA+AGG - chr7_4:5264381-5264400 None:intergenic 40.0%
TTTGTATCTCAATCCCTTGG+TGG - chr7_4:5264440-5264459 None:intergenic 40.0%
!! AACAGTCAGAGTTTTGATGG+TGG - chr7_4:5264485-5264504 None:intergenic 40.0%
GCAAATCAAAAGGTGGTTGA+AGG - chr7_4:5265242-5265261 None:intergenic 40.0%
TCGCGAATTCAATCTATGTG+AGG + chr7_4:5265270-5265289 Msa1136620:intron 40.0%
GCTATCACATGAGTTATAGC+TGG - chr7_4:5265442-5265461 None:intergenic 40.0%
TGAACATGGAATTTGCAGCA+AGG + chr7_4:5265497-5265516 Msa1136620:CDS 40.0%
GGTAGAACGTAAAGAGCTTG+TGG + chr7_4:5262196-5262215 Msa1136620:CDS 45.0%
AAGATATTGGCAACGAGACG+TGG + chr7_4:5262527-5262546 Msa1136620:intron 45.0%
GTCAACTTCCCTATTTGAGG+AGG - chr7_4:5263106-5263125 None:intergenic 45.0%
! TAGGGAAGTTGACTTCCATG+AGG + chr7_4:5263113-5263132 Msa1136620:CDS 45.0%
! CAAAGGAAGAGGGTTCCTTT+TGG + chr7_4:5263159-5263178 Msa1136620:CDS 45.0%
! GGGTTCCTTTTGGCAGAATT+AGG + chr7_4:5263169-5263188 Msa1136620:CDS 45.0%
! GCTCAACATTTTCCTGCAAC+TGG - chr7_4:5263327-5263346 None:intergenic 45.0%
! GTAGTTTCCCCAATTTTGGG+AGG - chr7_4:5263504-5263523 None:intergenic 45.0%
TCTGAGGGTCTGTTTGGATA+GGG + chr7_4:5263528-5263547 Msa1136620:intron 45.0%
GGTCTGTTTGGATAGGGTTT+AGG + chr7_4:5263534-5263553 Msa1136620:intron 45.0%
CTGTTTGGATAGGGTTTAGG+GGG + chr7_4:5263537-5263556 Msa1136620:intron 45.0%
TGTTTGGATAGGGTTTAGGG+GGG + chr7_4:5263538-5263557 Msa1136620:intron 45.0%
GATGCTCAGAAGTAGAAGGT+TGG + chr7_4:5263789-5263808 Msa1136620:intron 45.0%
GAAATGGAAATAGGAGAGCC+TGG + chr7_4:5264031-5264050 Msa1136620:CDS 45.0%
ATTAGGGAACGCAGGGTTAT+AGG + chr7_4:5264094-5264113 Msa1136620:intron 45.0%
TCTTTGTTCATCCCTATCGG+AGG + chr7_4:5264289-5264308 Msa1136620:CDS 45.0%
AGGCTTGTCTTCCCTCAAAA+AGG - chr7_4:5264413-5264432 None:intergenic 45.0%
!! GAAAGACAGAAGGAGTGTCT+CGG - chr7_4:5264634-5264653 None:intergenic 45.0%
CACAAAGGCAGAAAGACAGA+AGG - chr7_4:5264644-5264663 None:intergenic 45.0%
AAGGTGGTTGAAGGAGTGAT+GGG - chr7_4:5265233-5265252 None:intergenic 45.0%
AAAGGTGGTTGAAGGAGTGA+TGG - chr7_4:5265234-5265253 None:intergenic 45.0%
! CATGTGATAGCAAGCTCTGA+TGG + chr7_4:5265451-5265470 Msa1136620:CDS 45.0%
! GATAGCAAGCTCTGATGGAA+AGG + chr7_4:5265456-5265475 Msa1136620:CDS 45.0%
ATGGAAAGGAAGATCAGCCA+TGG + chr7_4:5265470-5265489 Msa1136620:CDS 45.0%
TCAGCCATGGAAAGTGAACA+TGG + chr7_4:5265483-5265502 Msa1136620:CDS 45.0%
CGTAAAGAGCTTGTGGCCAT+AGG + chr7_4:5262203-5262222 Msa1136620:CDS 50.0%
AGAGCTTGTGGCCATAGGAA+AGG + chr7_4:5262208-5262227 Msa1136620:CDS 50.0%
CACGTGCTTACTCGACATGT+TGG - chr7_4:5263272-5263291 None:intergenic 50.0%
TGGGGAAACTACCTTCTCTG+AGG + chr7_4:5263512-5263531 Msa1136620:intron 50.0%
GGGGAAACTACCTTCTCTGA+GGG + chr7_4:5263513-5263532 Msa1136620:intron 50.0%
! ACCTTCTCTGAGGGTCTGTT+TGG + chr7_4:5263522-5263541 Msa1136620:intron 50.0%
TCCAAACAGACCCTCAGAGA+AGG - chr7_4:5263526-5263545 None:intergenic 50.0%
! CTCTGAGGGTCTGTTTGGAT+AGG + chr7_4:5263527-5263546 Msa1136620:intron 50.0%
GTTTGGATAGGGTTTAGGGG+GGG + chr7_4:5263539-5263558 Msa1136620:intron 50.0%
AGGTTTAGGAGGGGAAGAGA+GGG - chr7_4:5263736-5263755 None:intergenic 50.0%
AAGGTTTAGGAGGGGAAGAG+AGG - chr7_4:5263737-5263756 None:intergenic 50.0%
TGGGGATGCTCAGAAGTAGA+AGG + chr7_4:5263785-5263804 Msa1136620:intron 50.0%
!! GTGAGGCTTTGAATGCTCGT+TGG - chr7_4:5263959-5263978 None:intergenic 50.0%
GGAATCATGCTTCAGAACCC+TGG - chr7_4:5264392-5264411 None:intergenic 50.0%
TCTCGGTCTTGGACAACGAA+GGG - chr7_4:5264617-5264636 None:intergenic 50.0%
!! GGCATTAGAAGTGCTTGCAG+AGG - chr7_4:5265212-5265231 None:intergenic 50.0%
AAAGGAGTGGCCCTCTGTCA+AGG + chr7_4:5262307-5262326 Msa1136620:CDS 55.0%
GGATGAAGAGTCCCAGTTGC+AGG + chr7_4:5263312-5263331 Msa1136620:CDS 55.0%
GATAGGGTTTAGGGGGGGAA+GGG + chr7_4:5263544-5263563 Msa1136620:intron 55.0%
GGTTTAGGAGGGGAAGAGAG+GGG - chr7_4:5263735-5263754 None:intergenic 55.0%
TAGGAGAGCCTGGAGAGCAA+TGG + chr7_4:5264041-5264060 Msa1136620:CDS 55.0%
AGACAAGCCTTCGACCACCA+AGG + chr7_4:5264423-5264442 Msa1136620:CDS 55.0%
GACAAGCCTTCGACCACCAA+GGG + chr7_4:5264424-5264443 Msa1136620:CDS 55.0%
! CTCAATCCCTTGGTGGTCGA+AGG - chr7_4:5264433-5264452 None:intergenic 55.0%
GTCTCGGTCTTGGACAACGA+AGG - chr7_4:5264618-5264637 None:intergenic 55.0%
!! CAGAAGGAGTGTCTCGGTCT+TGG - chr7_4:5264628-5264647 None:intergenic 55.0%
GGATAGGGTTTAGGGGGGGA+AGG + chr7_4:5263543-5263562 Msa1136620:intron 60.0%
TAGGAGGGGAAGAGAGGGGA+GGG - chr7_4:5263731-5263750 None:intergenic 60.0%
TTAGGAGGGGAAGAGAGGGG+AGG - chr7_4:5263732-5263751 None:intergenic 60.0%
AGGGTTTAGGGGGGGAAGGG+AGG + chr7_4:5263547-5263566 Msa1136620:intron 65.0%
GGGTTTAGGGGGGGAAGGGA+GGG + chr7_4:5263548-5263567 Msa1136620:intron 65.0%
GGTTTAGGGGGGGAAGGGAG+GGG + chr7_4:5263549-5263568 Msa1136620:intron 65.0%
TTAGGGGGGGAAGGGAGGGG+TGG + chr7_4:5263552-5263571 Msa1136620:intron 70.0%
TAGGGGGGGAAGGGAGGGGT+GGG + chr7_4:5263553-5263572 Msa1136620:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 5262107 5265552 5262107 ID=Msa1136620;Name=Msa1136620
chr7_4 mRNA 5262107 5265552 5262107 ID=Msa1136620-mRNA-1;Parent=Msa1136620;Name=Msa1136620-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.5|1|1|8|0|498
chr7_4 exon 5262107 5262373 5262107 ID=Msa1136620-mRNA-1:exon:1372;Parent=Msa1136620-mRNA-1
chr7_4 exon 5262580 5262753 5262580 ID=Msa1136620-mRNA-1:exon:1373;Parent=Msa1136620-mRNA-1
chr7_4 exon 5262871 5262901 5262871 ID=Msa1136620-mRNA-1:exon:1374;Parent=Msa1136620-mRNA-1
chr7_4 exon 5263005 5263412 5263005 ID=Msa1136620-mRNA-1:exon:1375;Parent=Msa1136620-mRNA-1
chr7_4 exon 5263798 5264108 5263798 ID=Msa1136620-mRNA-1:exon:1376;Parent=Msa1136620-mRNA-1
chr7_4 exon 5264228 5264310 5264228 ID=Msa1136620-mRNA-1:exon:1377;Parent=Msa1136620-mRNA-1
chr7_4 exon 5264393 5264467 5264393 ID=Msa1136620-mRNA-1:exon:1378;Parent=Msa1136620-mRNA-1
chr7_4 exon 5265405 5265552 5265405 ID=Msa1136620-mRNA-1:exon:1379;Parent=Msa1136620-mRNA-1
chr7_4 CDS 5262107 5262373 5262107 ID=Msa1136620-mRNA-1:cds;Parent=Msa1136620-mRNA-1
chr7_4 CDS 5262580 5262753 5262580 ID=Msa1136620-mRNA-1:cds;Parent=Msa1136620-mRNA-1
chr7_4 CDS 5262871 5262901 5262871 ID=Msa1136620-mRNA-1:cds;Parent=Msa1136620-mRNA-1
chr7_4 CDS 5263005 5263412 5263005 ID=Msa1136620-mRNA-1:cds;Parent=Msa1136620-mRNA-1
chr7_4 CDS 5263798 5264108 5263798 ID=Msa1136620-mRNA-1:cds;Parent=Msa1136620-mRNA-1
chr7_4 CDS 5264228 5264310 5264228 ID=Msa1136620-mRNA-1:cds;Parent=Msa1136620-mRNA-1
chr7_4 CDS 5264393 5264467 5264393 ID=Msa1136620-mRNA-1:cds;Parent=Msa1136620-mRNA-1
chr7_4 CDS 5265405 5265552 5265405 ID=Msa1136620-mRNA-1:cds;Parent=Msa1136620-mRNA-1
Gene Sequence

>Msa1136620

ATGCGAACAATACCTTCGCATGATATATCAAAGCTATCTAACAAATATTGTTGGGAATTATTTAAAGAAAGAGCTTTTGGACCAAATGAGGTAGAACGTAAAGAGCTTGTGGCCATAGGAAAGGAGATACTAAAGAAGTGCAGGGGAGTGCCTCTTACAACAATAACACTAGGAAGTCTCATGCGCTTTAAAAGAGAGGAAAAGGAGTGGCCCTCTGTCAAGGAAAGCAAACTATGGAGTTTACAAGATGAAGATTATGTCATGCATGATATTGAGACAGATGTATTTGGCAAAATTACAAGTTTCAAGATGCACGATCTTGTTCACGATCTTGCTCAATCAATTTCAGAAGAGGTGCGTTGCATTTCATCAGACGATGACATGCCTAGTACATTAGAAAGAGTCCACCATATCTCATATGAAAAGACAATTTCACCTAAGGTCACTTTATTTGAAGTGACATCTTCAATCGACAGTTGTAGAAAGCTCCAAAAATTGCCTAATAATTTGATACGCTTGAAAGCTCTACAACATCTATCCTTGAATAACTGCGTGAGTCTATCAAGTTTACCTCCTCAAATAGGGAAGTTGACTTCCATGAGGACTTTGAGCATGTATGTAGTTGGCAAAGGAAGAGGGTTCCTTTTGGCAGAATTAGGACAGTTAAATTTCAAAATAGATAAGTTTCACATCAAGCACCTTGAGAGAGTGAAAAGTGTAGAAGATGCTAAAGAAGCCAACATGTCGAGTAAGCACGTGAACAATTTGCGGTTGTCATGGGATGAAGAGTCCCAGTTGCAGGAAAATGTTGAGCAGCTTCTTGAAGTACTTCAACCTTTTACCCAACAACTTCAAGAATTATGTGTGGTAGGATATGTAGAAGTAGAAGGTTGGAATGAGGCTCTAAATCACATGACTTCCCTTCAATCATTGACATTTAGGGTTCTTCCAAACCTGACATCCTTACCAAACTCTTTAGGAAACCTTATCTTGGTTCAAAAACTAGATATTATACATTGTCCGAAGTTGATTTCTCTTCCAACGAGCATTCAAAGCCTCACTAGTTTGAAATCTTTAATGATTTATCAATGTCATGAGTTGGAGAAACGATGTGAAATGGAAATAGGAGAGCCTGGAGAGCAATGGTCAAAAATATCTCACATTCACGATATTGAAATTAGGGAACGCAGGGAGGTTTTTATTTTGAAGGACCACAGATTTGGATTTGATTTCCCTTCTTGCATTTGTCATTTCTTTGTTCATCCCTATCGGAGGGTTCTGAAGCATGATTCCTTTTTGAGGGAAGACAAGCCTTCGACCACCAAGGGATTGAGATACAAACAATGTGAGTCAGAAAAATCCACTGGAACAACAATTCATATGCCAGCTATAACTCATGTGATAGCAAGCTCTGATGGAAAGGAAGATCAGCCATGGAAAGTGAACATGGAATTTGCAGCAAGGAAAGACTATTTCTCACCAAGCTTCTGTAGCTGA
Protein sequence

>Msa1136620

MRTIPSHDISKLSNKYCWELFKERAFGPNEVERKELVAIGKEILKKCRGVPLTTITLGSLMRFKREEKEWPSVKESKLWSLQDEDYVMHDIETDVFGKITSFKMHDLVHDLAQSISEEVRCISSDDDMPSTLERVHHISYEKTISPKVTLFEVTSSIDSCRKLQKLPNNLIRLKALQHLSLNNCVSLSSLPPQIGKLTSMRTLSMYVVGKGRGFLLAELGQLNFKIDKFHIKHLERVKSVEDAKEANMSSKHVNNLRLSWDEESQLQENVEQLLEVLQPFTQQLQELCVVGYVEVEGWNEALNHMTSLQSLTFRVLPNLTSLPNSLGNLILVQKLDIIHCPKLISLPTSIQSLTSLKSLMIYQCHELEKRCEMEIGEPGEQWSKISHIHDIEIRERREVFILKDHRFGFDFPSCICHFFVHPYRRVLKHDSFLREDKPSTTKGLRYKQCESEKSTGTTIHMPAITHVIASSDGKEDQPWKVNMEFAARKDYFSPSFCS*