AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1007870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007870 MtrunA17_Chr5g0413811 56.775 583 126 7 1 463 92 668 0.0 573
Msa1007870 MtrunA17_Chr5g0414201 52.673 505 140 9 1 431 316 795 2.74e-155 467
Msa1007870 MtrunA17_Chr5g0417251 47.965 565 156 11 1 432 81 640 1.52e-153 453
Msa1007870 MtrunA17_Chr5g0414181 53.347 493 144 12 1 414 315 800 6.82e-144 438
Msa1007870 MtrunA17_Chr5g0415471 48.842 518 173 11 1 431 318 830 6.84e-140 432
Msa1007870 MtrunA17_Chr5g0415471 46.970 132 62 2 354 480 991 1119 3.75e-27 116
Msa1007870 MtrunA17_Chr5g0414311 46.332 518 186 11 1 431 320 832 1.44e-133 415
Msa1007870 MtrunA17_Chr5g0414311 50.000 116 55 1 354 469 994 1106 5.26e-26 112
Msa1007870 MtrunA17_Chr5g0415511 48.085 470 157 8 1 467 316 701 5.15e-126 385
Msa1007870 MtrunA17_Chr5g0414301 51.372 401 93 8 128 431 1 396 8.07e-106 328
Msa1007870 MtrunA17_Chr5g0414301 37.349 249 116 8 246 459 322 565 1.23e-24 107
Msa1007870 MtrunA17_Chr5g0414171 79.213 178 37 0 1 178 243 420 8.46e-97 300
Msa1007870 MtrunA17_Chr5g0414231 73.913 184 48 0 1 184 316 499 4.16e-92 290
Msa1007870 MtrunA17_Chr6g0470021 38.828 546 241 16 1 458 198 738 4.83e-91 297
Msa1007870 MtrunA17_Chr6g0470011 39.360 531 230 15 1 444 307 832 2.95e-90 299
Msa1007870 MtrunA17_Chr6g0470011 35.088 114 68 2 354 467 988 1095 2.93e-12 69.7
Msa1007870 MtrunA17_Chr6g0470081 38.230 531 236 13 1 444 307 832 5.89e-89 296
Msa1007870 MtrunA17_Chr6g0470081 38.182 110 62 2 354 463 988 1091 3.56e-14 75.9
Msa1007870 MtrunA17_Chr3g0085931 37.429 529 241 14 1 444 307 830 9.41e-89 295
Msa1007870 MtrunA17_Chr6g0468101 38.812 505 260 13 1 461 306 805 8.01e-88 292
Msa1007870 MtrunA17_Chr6g0468101 29.412 238 125 5 227 463 858 1053 6.46e-15 78.2
Msa1007870 MtrunA17_Chr6g0467911 41.628 430 169 10 1 351 307 733 8.87e-87 283
Msa1007870 MtrunA17_Chr5g0415481 41.889 413 146 12 118 437 1 412 2.84e-84 269
Msa1007870 MtrunA17_Chr6g0467961 36.609 519 243 13 7 444 310 823 3.23e-84 278
Msa1007870 MtrunA17_Chr3g0123111 37.002 527 244 14 1 444 306 827 5.16e-84 282
Msa1007870 MtrunA17_Chr3g0123111 29.911 224 127 7 246 463 891 1090 1.47e-13 73.9
Msa1007870 MtrunA17_Chr6g0468021 37.187 519 240 14 7 444 310 823 1.69e-80 272
Msa1007870 MtrunA17_Chr6g0468021 30.962 239 120 7 226 461 876 1072 6.98e-15 78.2
Msa1007870 MtrunA17_Chr5g0430141 35.572 551 256 11 7 470 318 856 2.28e-80 271
Msa1007870 MtrunA17_Chr6g0468151 35.460 533 255 14 7 456 318 844 5.03e-80 271
Msa1007870 MtrunA17_Chr6g0468151 27.897 233 127 4 227 458 893 1085 2.12e-11 67.0
Msa1007870 MtrunA17_Chr6g0468451 35.878 524 246 13 1 439 305 823 1.23e-79 270
Msa1007870 MtrunA17_Chr6g0468451 39.394 99 57 2 365 463 1005 1100 3.92e-13 72.4
Msa1007870 MtrunA17_Chr5g0431051 36.935 509 213 11 7 438 318 795 1.80e-79 268
Msa1007870 MtrunA17_Chr6g0468271 35.484 527 252 14 1 444 303 824 3.72e-79 269
Msa1007870 MtrunA17_Chr1g0155321 38.950 457 196 12 3 379 308 761 8.86e-79 266
Msa1007870 MtrunA17_Chr6g0468121 35.057 522 249 14 7 444 311 826 2.95e-78 266
Msa1007870 MtrunA17_Chr6g0468121 28.870 239 118 7 232 463 885 1078 6.08e-14 75.1
Msa1007870 MtrunA17_Chr5g0430641 33.932 557 278 12 1 473 311 861 1.05e-76 261
Msa1007870 MtrunA17_Chr5g0430951 36.187 514 223 10 1 438 311 795 1.58e-76 258
Msa1007870 MtrunA17_Chr5g0429951 38.876 427 182 7 1 349 311 736 5.81e-76 258
Msa1007870 MtrunA17_Chr5g0429961 34.866 522 259 8 3 447 313 830 1.36e-75 257
Msa1007870 MtrunA17_Chr5g0430291 35.340 515 228 11 1 438 311 797 1.64e-75 257
Msa1007870 MtrunA17_Chr7g0244231 35.283 530 254 13 1 447 306 829 3.41e-75 256
Msa1007870 MtrunA17_Chr5g0430581 36.667 510 222 13 1 438 306 786 7.66e-73 249
Msa1007870 MtrunA17_Chr5g0430511 37.324 426 189 7 1 349 312 736 1.21e-72 249
Msa1007870 MtrunA17_Chr5g0430441 37.972 424 185 9 1 349 311 731 8.01e-72 247
Msa1007870 MtrunA17_Chr5g0430721 35.055 542 258 17 1 456 352 885 2.11e-71 246
Msa1007870 MtrunA17_Chr1g0155991 36.204 511 215 15 1 431 308 787 8.96e-71 244
Msa1007870 MtrunA17_Chr4g0027251 37.442 430 186 10 1 349 311 738 6.21e-70 242
Msa1007870 MtrunA17_Chr5g0430621 33.039 566 239 14 1 435 311 867 5.98e-69 239
Msa1007870 MtrunA17_Chr6g0468111 39.011 364 148 7 1 292 148 509 1.38e-68 229
Msa1007870 MtrunA17_Chr6g0470001 36.087 460 200 16 88 458 1 455 8.14e-59 207
Msa1007870 MtrunA17_Chr6g0470001 38.776 98 54 2 370 467 611 702 1.53e-11 67.0
Msa1007870 MtrunA17_Chr6g0468331 32.026 459 220 12 1 458 304 671 2.32e-55 198
Msa1007870 MtrunA17_Chr8g0355411 28.885 547 281 13 7 468 323 846 4.67e-54 196
Msa1007870 MtrunA17_Chr6g0468361 34.009 444 203 14 88 446 1 439 3.69e-53 186
Msa1007870 MtrunA17_Chr6g0468201 32.892 453 218 16 88 461 1 446 4.22e-52 189
Msa1007870 MtrunA17_Chr6g0468201 49.438 89 42 1 370 458 589 674 7.59e-15 77.8
Msa1007870 MtrunA17_Chr5g0417301 52.273 176 81 1 35 210 299 471 1.96e-51 184
Msa1007870 MtrunA17_Chr4g0020501 33.173 416 252 16 6 407 279 682 4.92e-51 187
Msa1007870 MtrunA17_Chr7g0257221 29.554 538 292 15 1 463 336 861 7.97e-51 186
Msa1007870 MtrunA17_Chr3g0089501 30.213 470 228 14 3 378 320 783 3.72e-50 184
Msa1007870 MtrunA17_Chr3g0089781 29.779 497 249 15 3 407 322 810 8.65e-50 184
Msa1007870 MtrunA17_Chr3g0087301 32.719 434 191 12 1 432 316 650 1.02e-49 184
Msa1007870 MtrunA17_Chr3g0087301 54.922 193 76 6 226 409 600 790 2.96e-48 180
Msa1007870 MtrunA17_Chr3g0087301 57.658 111 44 1 354 464 973 1080 5.08e-27 115
Msa1007870 MtrunA17_Chr5g0414161 54.502 211 69 6 227 432 105 293 2.12e-49 175
Msa1007870 MtrunA17_Chr3g0089601 30.213 470 228 14 3 378 320 783 3.29e-49 182
Msa1007870 MtrunA17_Chr3g0092241 29.915 468 234 14 3 379 322 786 4.57e-49 182
Msa1007870 MtrunA17_Chr7g0257191 30.206 533 299 14 1 465 337 864 5.14e-49 181
Msa1007870 MtrunA17_Chr7g0257541 29.032 558 271 17 1 463 335 862 6.11e-49 181
Msa1007870 MtrunA17_Chr3g0092261 29.915 468 234 14 3 379 366 830 6.28e-49 182
Msa1007870 MtrunA17_Chr6g0468341 30.833 480 287 11 1 437 306 783 1.85e-48 180
Msa1007870 MtrunA17_Chr3g0089541 28.893 488 245 15 2 393 325 806 4.00e-48 179
Msa1007870 MtrunA17_Chr3g0082101 32.020 406 226 12 3 363 327 727 6.26e-48 178
Msa1007870 MtrunA17_Chr3g0082891 29.277 567 263 20 3 463 306 840 1.24e-47 177
Msa1007870 MtrunA17_Chr3g0089991 29.960 494 242 16 3 399 326 812 1.47e-47 178
Msa1007870 MtrunA17_Chr1g0169901 28.938 546 274 17 1 441 310 846 2.28e-47 177
Msa1007870 MtrunA17_Chr3g0089651 28.893 488 244 15 3 393 326 807 2.51e-47 177
Msa1007870 MtrunA17_Chr3g0089811 29.691 485 244 17 3 393 322 803 2.90e-47 177
Msa1007870 MtrunA17_Chr3g0089761 29.508 488 240 15 3 393 322 802 3.12e-47 177
Msa1007870 MtrunA17_Chr5g0430901 32.406 503 207 16 1 435 311 748 4.63e-47 176
Msa1007870 MtrunA17_Chr3g0089211 28.370 497 256 13 3 407 369 857 1.07e-46 175
Msa1007870 MtrunA17_Chr3g0085521 28.325 579 263 17 8 438 305 879 3.57e-46 174
Msa1007870 MtrunA17_Chr3g0086741 29.333 525 249 14 9 438 338 835 3.86e-46 173
Msa1007870 MtrunA17_Chr3g0089251 28.773 497 254 15 3 407 351 839 1.30e-45 172
Msa1007870 MtrunA17_Chr3g0090371 30.505 436 209 13 3 349 322 752 1.81e-45 171
Msa1007870 MtrunA17_Chr3g0085131 31.081 444 208 12 1 349 304 744 7.71e-45 169
Msa1007870 MtrunA17_Chr3g0084051 29.637 523 270 16 1 432 321 836 1.24e-44 169
Msa1007870 MtrunA17_Chr3g0086621 29.032 496 256 14 9 413 311 801 1.67e-44 169
Msa1007870 MtrunA17_Chr1g0189551 29.422 554 269 17 1 463 346 868 2.64e-44 167
Msa1007870 MtrunA17_Chr3g0089421 28.427 496 252 16 7 407 325 812 4.10e-44 167
Msa1007870 MtrunA17_Chr4g0071021 56.338 142 62 0 1 142 294 435 7.92e-44 161
Msa1007870 MtrunA17_Chr5g0433771 27.518 556 286 18 3 462 318 852 9.23e-44 166
Msa1007870 MtrunA17_Chr3g0090141 30.068 439 208 13 3 349 322 753 9.87e-44 166
Msa1007870 MtrunA17_Chr3g0086221 30.101 495 248 14 9 410 310 799 1.15e-43 166
Msa1007870 MtrunA17_Chr3g0091081 28.516 519 250 15 3 431 322 809 2.57e-43 165
Msa1007870 MtrunA17_Chr3g0082131 28.868 530 242 18 4 431 323 819 2.88e-43 165
Msa1007870 MtrunA17_Chr2g0309721 28.169 497 254 14 3 407 322 807 3.14e-43 165
Msa1007870 MtrunA17_Chr4g0009781 30.303 429 194 14 12 339 318 742 1.17e-42 163
Msa1007870 MtrunA17_Chr3g0091011 29.081 533 256 16 1 438 285 790 1.73e-42 162
Msa1007870 MtrunA17_Chr3g0090691 28.107 523 248 16 3 431 322 810 1.82e-42 162
Msa1007870 MtrunA17_Chr8g0338671 38.079 302 157 12 3 284 202 493 1.92e-42 160
Msa1007870 MtrunA17_Chr3g0089911 32.123 358 165 10 3 292 321 668 2.05e-42 160
Msa1007870 MtrunA17_Chr7g0248221 28.102 548 285 17 1 464 325 847 2.47e-42 162
Msa1007870 MtrunA17_Chr8g0348931 30.000 440 206 14 3 349 329 759 2.83e-42 162
Msa1007870 MtrunA17_Chr3g0087841 30.068 439 208 14 3 349 322 753 3.43e-42 162
Msa1007870 MtrunA17_Chr4g0025391 27.860 542 249 18 2 447 320 815 3.54e-42 162
Msa1007870 MtrunA17_Chr3g0086151 37.413 286 159 7 8 275 310 593 5.93e-42 160
Msa1007870 MtrunA17_Chr3g0086151 26.923 286 167 11 159 437 551 801 7.44e-15 77.8
Msa1007870 MtrunA17_Chr2g0316291 31.072 457 207 16 9 365 328 776 8.28e-42 160
Msa1007870 MtrunA17_Chr2g0316291 29.771 131 80 2 340 461 958 1085 1.03e-11 67.8
Msa1007870 MtrunA17_Chr8g0352861 25.503 596 324 16 1 497 327 901 8.34e-42 160
Msa1007870 MtrunA17_Chr3g0083751 30.330 455 209 14 7 365 333 775 8.34e-42 160
Msa1007870 MtrunA17_Chr3g0085091 28.571 525 254 15 9 438 316 814 8.56e-42 160
Msa1007870 MtrunA17_Chr3g0087541 28.402 507 260 16 1 410 322 822 1.27e-41 160
Msa1007870 MtrunA17_Chr3g0090651 28.736 522 247 18 3 431 322 811 1.34e-41 160
Msa1007870 MtrunA17_Chr3g0085431 32.311 424 218 16 47 410 2 416 1.50e-41 155
Msa1007870 MtrunA17_Chr6g0484551 29.630 513 233 16 13 431 306 784 1.96e-41 159
Msa1007870 MtrunA17_Chr3g0091061 28.407 521 250 17 3 431 322 811 2.57e-41 159
Msa1007870 MtrunA17_Chr3g0082881 28.489 523 255 19 3 413 306 821 3.35e-41 158
Msa1007870 MtrunA17_Chr8g0351821 53.957 139 64 0 1 139 307 445 3.68e-41 154
Msa1007870 MtrunA17_Chr3g0085751 27.993 593 272 19 1 443 300 887 6.25e-41 158
Msa1007870 MtrunA17_Chr3g0089961 27.721 487 246 16 7 393 326 806 6.84e-41 157
Msa1007870 MtrunA17_Chr4g0010261 33.125 320 161 9 12 282 318 633 1.20e-40 157
Msa1007870 MtrunA17_Chr3g0085551 28.070 513 267 16 1 418 197 702 1.59e-40 156
Msa1007870 MtrunA17_Chr5g0414291 72.727 99 27 0 1 99 320 418 1.61e-40 151
Msa1007870 MtrunA17_Chr3g0086181 36.713 286 161 7 8 275 310 593 2.13e-40 156
Msa1007870 MtrunA17_Chr3g0086181 33.690 187 115 7 227 410 616 796 3.08e-15 79.0
Msa1007870 MtrunA17_Chr3g0087701 28.846 520 254 12 9 438 313 806 2.22e-40 156
Msa1007870 MtrunA17_Chr8g0338861 34.524 336 191 12 18 334 39 364 2.48e-40 155
Msa1007870 MtrunA17_Chr3g0086091 36.014 286 163 6 8 275 121 404 3.16e-40 155
Msa1007870 MtrunA17_Chr3g0086091 33.175 211 112 7 227 434 427 611 2.18e-16 82.8
Msa1007870 MtrunA17_Chr3g0085451 28.687 495 261 14 8 413 301 792 3.62e-40 155
Msa1007870 MtrunA17_Chr3g0078361 33.000 300 174 8 4 282 140 433 4.82e-40 150
Msa1007870 MtrunA17_Chr8g0338261 36.458 288 169 6 1 276 316 601 6.02e-40 155
Msa1007870 MtrunA17_Chr3g0082811 28.200 500 241 17 19 429 322 792 6.24e-40 154
Msa1007870 MtrunA17_Chr1g0164581 28.947 456 204 15 4 352 299 741 6.68e-40 155
Msa1007870 MtrunA17_Chr8g0337891 34.076 314 167 9 9 285 323 633 1.20e-39 153
Msa1007870 MtrunA17_Chr3g0090431 29.412 442 207 15 3 349 194 625 1.70e-39 154
Msa1007870 MtrunA17_Chr3g0085471 28.041 485 260 16 9 410 330 808 2.23e-39 153
Msa1007870 MtrunA17_Chr8g0356251 28.161 522 252 18 1 431 347 836 2.64e-39 153
Msa1007870 MtrunA17_Chr1g0164611 31.313 297 176 5 3 275 327 619 3.92e-39 152
Msa1007870 MtrunA17_Chr6g0471941 33.010 309 171 6 1 275 315 621 5.57e-39 152
Msa1007870 MtrunA17_Chr3g0082391 29.032 527 241 22 1 429 321 812 6.27e-39 151
Msa1007870 MtrunA17_Chr7g0218941 37.024 289 156 8 1 275 317 593 1.01e-38 151
Msa1007870 MtrunA17_Chr3g0084081 29.941 511 236 19 17 438 337 814 1.14e-38 151
Msa1007870 MtrunA17_Chr3g0085111 27.392 533 266 15 1 438 303 809 1.38e-38 151
Msa1007870 MtrunA17_Chr1g0164631 27.974 454 228 16 4 363 332 780 1.61e-38 150
Msa1007870 MtrunA17_Chr8g0338361 34.437 302 162 8 9 275 189 489 1.67e-38 147
Msa1007870 MtrunA17_Chr3g0091971 28.404 426 216 15 7 363 291 696 1.86e-38 150
Msa1007870 MtrunA17_Chr3g0086161 36.713 286 159 7 9 275 311 593 1.92e-38 150
Msa1007870 MtrunA17_Chr3g0086161 30.660 212 117 8 230 438 619 803 1.09e-13 74.3
Msa1007870 MtrunA17_Chr7g0248531 28.603 451 230 12 1 363 307 753 2.00e-38 150
Msa1007870 MtrunA17_Chr1g0164391 33.779 299 172 7 4 282 325 617 2.13e-38 150
Msa1007870 MtrunA17_Chr6g0475491 43.523 193 104 4 3 191 321 512 3.27e-38 149
Msa1007870 MtrunA17_Chr3g0089591 28.508 449 256 12 3 432 327 729 4.14e-38 149
Msa1007870 MtrunA17_Chr8g0338251 38.710 217 128 4 1 213 302 517 8.90e-38 148
Msa1007870 MtrunA17_Chr3g0090401 28.571 511 255 20 3 438 533 1008 1.23e-37 148
Msa1007870 MtrunA17_Chr3g0089471 28.982 452 253 14 2 432 322 726 1.77e-37 147
Msa1007870 MtrunA17_Chr3g0083621 32.082 293 173 8 1 275 332 616 2.22e-37 147
Msa1007870 MtrunA17_Chr8g0352211 33.007 306 156 7 9 273 1321 1618 2.43e-37 147
Msa1007870 MtrunA17_Chr3g0087731 35.274 292 165 8 1 275 115 399 2.47e-37 147
Msa1007870 MtrunA17_Chr7g0257201 27.726 541 298 17 1 463 336 861 2.65e-37 147
Msa1007870 MtrunA17_Chr2g0309151 35.192 287 166 8 1 273 104 384 3.59e-37 143
Msa1007870 MtrunA17_Chr3g0085161 28.008 532 257 17 1 435 167 669 3.91e-37 146
Msa1007870 MtrunA17_Chr3g0089871 32.095 296 172 7 3 275 321 610 4.26e-37 146
Msa1007870 MtrunA17_Chr3g0082791 34.797 296 164 9 1 275 323 610 6.44e-37 145
Msa1007870 MtrunA17_Chr3g0113781 28.205 507 259 18 1 413 99 594 6.85e-37 145
Msa1007870 MtrunA17_Chr4g0010221 32.492 317 165 10 12 282 318 631 6.91e-37 145
Msa1007870 MtrunA17_Chr4g0010251 32.698 315 170 9 9 282 315 628 7.03e-37 145
Msa1007870 MtrunA17_Chr4g0010251 27.234 235 147 8 197 413 581 809 8.69e-11 64.7
Msa1007870 MtrunA17_Chr8g0352831 32.776 299 172 7 1 275 331 624 1.05e-36 145
Msa1007870 MtrunA17_Chr3g0113791 28.427 496 250 18 12 413 315 799 1.17e-36 145
Msa1007870 MtrunA17_Chr8g0338391 39.614 207 118 4 7 208 320 524 1.26e-36 145
Msa1007870 MtrunA17_Chr3g0082311 28.458 506 239 20 4 416 325 800 1.37e-36 145
Msa1007870 MtrunA17_Chr4g0010201 30.769 312 168 7 8 273 314 623 1.41e-36 145
Msa1007870 MtrunA17_Chr3g0084031 29.709 515 273 19 1 438 323 825 2.38e-36 144
Msa1007870 MtrunA17_Chr3g0084971 33.779 299 172 8 1 279 310 602 2.82e-36 144
Msa1007870 MtrunA17_Chr3g0085561 34.098 305 164 9 1 275 291 588 3.32e-36 144
Msa1007870 MtrunA17_Chr3g0082321 28.889 450 217 17 7 363 274 713 3.60e-36 143
Msa1007870 MtrunA17_Chr5g0446611 32.753 287 170 7 1 270 321 601 3.83e-36 143
Msa1007870 MtrunA17_Chr3g0113481 28.605 430 207 13 12 349 315 736 4.18e-36 143
Msa1007870 MtrunA17_Chr8g0346831 34.138 290 158 7 18 275 334 622 5.23e-36 143
Msa1007870 MtrunA17_Chr3g0082871 31.833 311 172 9 3 275 306 614 1.30e-35 141
Msa1007870 MtrunA17_Chr7g0221481 34.432 273 169 7 9 276 315 582 1.34e-35 142
Msa1007870 MtrunA17_Chr7g0221481 27.376 263 166 10 159 410 563 811 3.13e-15 79.0
Msa1007870 MtrunA17_Chr3g0087581 35.192 287 162 7 8 275 313 594 1.43e-35 142
Msa1007870 MtrunA17_Chr3g0087581 34.392 189 115 7 227 410 617 801 9.22e-17 84.0
Msa1007870 MtrunA17_Chr2g0282991 32.542 295 170 9 1 275 318 603 1.60e-35 142
Msa1007870 MtrunA17_Chr1g0169951 40.086 232 133 5 1 229 334 562 1.87e-35 141
Msa1007870 MtrunA17_Chr1g0169941 38.589 241 138 6 1 236 96 331 2.78e-35 135
Msa1007870 MtrunA17_Chr3g0085501 26.062 518 291 17 1 513 322 752 7.43e-35 140
Msa1007870 MtrunA17_Chr3g0085331 33.443 305 166 9 1 275 322 619 9.84e-35 139
Msa1007870 MtrunA17_Chr3g0085331 31.443 194 111 8 227 410 642 823 2.15e-11 67.0
Msa1007870 MtrunA17_Chr3g0082351 27.434 452 223 15 7 363 326 767 1.69e-34 139
Msa1007870 MtrunA17_Chr5g0415551 27.362 508 254 16 7 431 192 667 2.03e-34 137
Msa1007870 MtrunA17_Chr3g0085651 39.806 206 116 5 8 208 319 521 2.43e-34 138
Msa1007870 MtrunA17_Chr3g0085651 27.481 262 160 9 160 410 563 805 1.31e-17 86.7
Msa1007870 MtrunA17_Chr8g0338621 38.298 282 154 11 6 275 322 595 2.82e-34 137
Msa1007870 MtrunA17_Chr3g0083721 32.082 293 173 9 1 275 264 548 4.70e-34 137
Msa1007870 MtrunA17_Chr1g0147141 27.841 528 237 17 3 431 327 809 5.71e-34 137
Msa1007870 MtrunA17_Chr3g0089931 38.624 189 109 4 2 186 306 491 6.39e-34 134
Msa1007870 MtrunA17_Chr3g0085171 27.756 508 267 14 1 410 290 795 9.35e-34 136
Msa1007870 MtrunA17_Chr4g0051651 31.692 325 167 10 1 273 348 669 1.81e-33 134
Msa1007870 MtrunA17_Chr3g0084811 27.174 460 228 16 1 365 472 919 3.01e-33 135
Msa1007870 MtrunA17_Chr3g0084061 27.466 517 251 16 18 438 329 817 2.14e-31 129
Msa1007870 MtrunA17_Chr3g0085801 26.866 469 275 16 1 410 324 783 4.27e-31 128
Msa1007870 MtrunA17_Chr6g0456131 30.323 310 171 10 9 275 314 621 4.35e-31 128
Msa1007870 MtrunA17_Chr3g0083681 25.721 451 230 15 7 365 308 745 6.87e-31 127
Msa1007870 MtrunA17_Chr3g0080871 31.769 277 165 8 7 265 313 583 7.49e-31 127
Msa1007870 MtrunA17_Chr3g0080871 35.664 143 86 5 227 365 616 756 1.88e-12 70.5
Msa1007870 MtrunA17_Chr2g0299091 26.337 505 259 17 7 407 294 789 1.35e-30 127
Msa1007870 MtrunA17_Chr3g0091961 29.021 286 178 8 7 275 8 285 1.37e-30 123
Msa1007870 MtrunA17_Chr2g0299121 25.743 505 262 18 7 407 320 815 6.24e-30 124
Msa1007870 MtrunA17_Chr5g0430331 48.800 125 62 1 2 126 308 430 1.08e-29 121
Msa1007870 MtrunA17_Chr2g0299101 25.195 512 270 18 7 414 320 822 1.17e-29 124
Msa1007870 MtrunA17_Chr4g0008461 29.861 288 176 9 7 275 309 589 2.06e-29 123
Msa1007870 MtrunA17_Chr4g0008461 35.417 144 81 6 229 365 614 752 2.12e-11 67.0
Msa1007870 MtrunA17_Chr3g0083591 28.623 276 170 9 7 264 293 559 2.19e-29 123
Msa1007870 MtrunA17_Chr3g0091041 39.474 190 100 8 39 223 346 525 2.29e-29 121
Msa1007870 MtrunA17_Chr7g0248431 39.583 192 109 5 1 188 325 513 9.41e-29 120
Msa1007870 MtrunA17_Chr3g0089431 36.667 150 84 3 3 149 326 467 3.82e-28 117
Msa1007870 MtrunA17_Chr7g0257251 40.719 167 94 3 1 162 2 168 4.29e-28 110
Msa1007870 MtrunA17_Chr8g0338681 42.857 147 80 3 3 146 96 241 8.89e-28 111
Msa1007870 MtrunA17_Chr3g0104421 52.000 100 48 0 61 160 1 100 9.05e-28 107
Msa1007870 MtrunA17_Chr5g0414211 52.756 127 56 2 345 471 277 399 4.01e-27 113
Msa1007870 MtrunA17_Chr5g0414211 51.240 121 46 5 299 406 7 127 5.45e-21 95.5
Msa1007870 MtrunA17_Chr1g0168901 28.231 294 185 9 7 282 300 585 1.16e-26 114
Msa1007870 MtrunA17_Chr2g0299141 29.667 300 175 12 7 275 35 329 1.62e-26 112
Msa1007870 MtrunA17_Chr6g0456121 26.360 478 260 15 1 393 304 774 2.42e-26 114
Msa1007870 MtrunA17_Chr8g0355071 40.625 160 91 3 12 167 142 301 3.71e-26 108
Msa1007870 MtrunA17_Chr5g0430341 31.548 336 149 11 148 408 2 331 4.21e-26 112
Msa1007870 MtrunA17_Chr2g0299151 32.990 194 117 3 1 185 301 490 6.12e-26 112
Msa1007870 MtrunA17_Chr3g0083641 26.923 286 184 6 7 275 304 581 9.74e-26 112
Msa1007870 MtrunA17_Chr3g0082371 31.532 222 142 6 55 275 1 213 1.14e-25 110
Msa1007870 MtrunA17_Chr3g0091121 26.579 380 187 11 72 365 6 379 3.67e-25 109
Msa1007870 MtrunA17_Chr6g0468381 27.635 427 219 15 88 436 1 415 1.27e-24 107
Msa1007870 MtrunA17_Chr6g0468381 30.901 233 118 5 232 463 319 509 3.06e-16 81.6
Msa1007870 MtrunA17_Chr3g0101251 26.316 304 188 9 7 275 299 601 2.83e-24 107
Msa1007870 MtrunA17_Chr3g0101321 25.050 499 305 15 4 458 324 797 4.89e-24 106
Msa1007870 MtrunA17_Chr1g0189511 31.250 256 163 7 32 275 3 257 8.86e-24 100
Msa1007870 MtrunA17_Chr2g0308491 42.373 118 65 3 1 115 140 257 1.16e-22 97.4
Msa1007870 MtrunA17_Chr3g0100801 25.914 301 181 7 8 273 300 593 3.38e-22 100
Msa1007870 MtrunA17_Chr5g0404741 27.645 293 187 6 7 275 322 613 3.62e-22 100
Msa1007870 MtrunA17_Chr3g0086071 36.538 208 112 5 85 275 9 213 5.93e-22 99.8
Msa1007870 MtrunA17_Chr3g0086071 25.524 286 170 10 159 437 172 421 7.35e-14 74.3
Msa1007870 MtrunA17_Chr3g0101221 26.490 302 199 10 7 292 338 632 6.54e-22 100
Msa1007870 MtrunA17_Chr2g0282891 27.703 296 155 7 1 279 26 279 2.18e-21 95.9
Msa1007870 MtrunA17_Chr4g0037421 30.631 222 143 6 5 219 381 598 3.03e-21 98.2
Msa1007870 MtrunA17_Chr7g0257551 40.146 137 80 2 1 135 259 395 3.48e-21 96.3
Msa1007870 MtrunA17_Chr3g0100731 26.549 452 251 15 12 405 94 522 5.08e-21 97.1
Msa1007870 MtrunA17_Chr3g0101201 24.396 414 271 14 7 383 336 744 5.39e-21 97.1
Msa1007870 MtrunA17_Chr3g0100831 24.183 459 270 14 34 430 358 800 2.03e-20 95.5
Msa1007870 MtrunA17_Chr3g0101181 23.419 427 264 15 7 384 343 755 2.64e-20 95.1
Msa1007870 MtrunA17_Chr4g0010491 40.171 117 66 3 8 121 314 429 2.84e-20 93.6
Msa1007870 MtrunA17_Chr2g0299001 24.092 606 312 21 3 464 323 924 3.56e-20 94.7
Msa1007870 MtrunA17_Chr3g0080791 26.557 305 187 8 7 275 336 639 3.66e-20 94.7
Msa1007870 MtrunA17_Chr3g0112511 26.059 307 185 8 8 275 326 629 4.20e-20 94.4
Msa1007870 MtrunA17_Chr3g0100851 24.895 478 268 20 19 427 222 677 4.73e-20 94.0
Msa1007870 MtrunA17_Chr3g0080601 25.962 312 181 10 7 275 335 639 5.29e-20 94.0
Msa1007870 MtrunA17_Chr7g0219851 31.980 197 110 4 7 184 317 508 6.08e-20 94.0
Msa1007870 MtrunA17_Chr3g0080771 26.230 305 188 8 7 275 336 639 7.16e-20 93.6
Msa1007870 MtrunA17_Chr3g0081211 24.837 306 192 7 7 275 334 638 8.54e-20 93.6
Msa1007870 MtrunA17_Chr3g0081391 25.163 306 191 8 7 275 335 639 1.51e-19 92.8
Msa1007870 MtrunA17_Chr5g0410001 25.325 308 187 9 7 275 322 625 2.44e-19 92.0
Msa1007870 MtrunA17_Chr3g0081361 24.765 319 180 9 3 275 340 644 3.38e-19 91.7
Msa1007870 MtrunA17_Chr3g0094301 25.163 306 191 9 7 275 336 640 4.61e-19 91.3
Msa1007870 MtrunA17_Chr7g0229761 25.163 306 191 9 7 275 336 640 4.61e-19 91.3
Msa1007870 MtrunA17_Chr3g0100681 26.299 308 183 9 8 275 148 451 5.04e-19 90.5
Msa1007870 MtrunA17_Chr3g0101391 27.885 208 142 4 4 203 13 220 5.17e-19 90.5
Msa1007870 MtrunA17_Chr3g0100961 24.837 306 187 9 8 275 335 635 5.25e-19 90.9
Msa1007870 MtrunA17_Chr5g0410031 24.430 307 192 8 7 275 323 627 5.45e-19 90.9
Msa1007870 MtrunA17_Chr3g0085701 42.446 139 78 2 1 137 304 442 6.33e-19 90.9
Msa1007870 MtrunA17_Chr3g0080651 27.609 297 173 10 17 275 264 556 8.12e-19 90.5
Msa1007870 MtrunA17_Chr1g0189351 28.986 207 138 5 4 202 328 533 2.18e-18 89.0
Msa1007870 MtrunA17_Chr8g0351811 28.615 325 205 11 153 456 46 364 2.46e-18 88.6
Msa1007870 MtrunA17_Chr8g0351811 30.435 230 140 7 252 466 398 622 2.46e-15 79.0
Msa1007870 MtrunA17_Chr5g0410301 32.234 273 158 11 198 447 561 829 2.83e-18 88.6
Msa1007870 MtrunA17_Chr3g0081341 25.163 306 191 9 7 275 399 703 3.68e-18 88.2
Msa1007870 MtrunA17_Chr3g0080731 24.430 307 192 9 7 275 336 640 7.21e-18 87.4
Msa1007870 MtrunA17_Chr4g0020411 39.252 107 62 3 7 111 44 149 8.50e-18 80.5
Msa1007870 MtrunA17_Chr5g0410161 30.351 313 162 14 165 438 686 981 9.09e-18 87.4
Msa1007870 MtrunA17_Chr3g0100971 24.159 327 192 10 4 285 328 643 1.15e-17 86.7
Msa1007870 MtrunA17_Chr3g0080751 24.104 307 194 9 7 275 336 641 1.39e-17 86.7
Msa1007870 MtrunA17_Chr3g0084351 27.419 186 119 4 7 181 261 441 2.90e-17 84.7
Msa1007870 MtrunA17_Chr3g0101231 25.733 307 185 11 7 275 342 643 3.51e-17 85.1
Msa1007870 MtrunA17_Chr3g0101211 28.652 178 124 3 7 181 125 302 4.38e-17 83.6
Msa1007870 MtrunA17_Chr3g0080741 25.723 311 183 10 7 275 338 642 5.09e-17 84.7
Msa1007870 MtrunA17_Chr3g0081371 30.588 170 110 4 17 181 354 520 5.61e-17 84.7
Msa1007870 MtrunA17_Chr3g0101241 26.768 198 140 3 4 196 309 506 7.49e-17 84.0
Msa1007870 MtrunA17_Chr3g0101271 26.768 198 140 3 4 196 309 506 8.11e-17 84.0
Msa1007870 MtrunA17_Chr5g0410021 26.471 306 180 10 12 275 322 624 1.02e-16 83.6
Msa1007870 MtrunA17_Chr5g0409991 24.422 303 188 9 12 275 322 622 1.85e-16 82.8
Msa1007870 MtrunA17_Chr3g0100761 23.547 327 194 10 4 285 288 603 2.46e-16 82.4
Msa1007870 MtrunA17_Chr3g0080721 25.163 306 189 10 7 275 74 376 6.43e-16 80.9
Msa1007870 MtrunA17_Chr1g0151481 24.601 313 195 8 3 275 333 644 7.56e-16 80.9
Msa1007870 MtrunA17_Chr5g0415491 68.085 47 15 0 1 47 175 221 8.53e-16 76.6
Msa1007870 MtrunA17_Chr6g0468141 51.429 70 34 0 7 76 194 263 9.27e-16 77.4
Msa1007870 MtrunA17_Chr5g0410261 33.333 276 148 14 198 445 592 859 1.05e-15 80.5
Msa1007870 MtrunA17_Chr3g0081181 28.272 191 116 6 3 181 318 499 1.07e-15 80.5
Msa1007870 MtrunA17_Chr1g0159111 27.124 306 192 9 1 275 299 604 2.03e-15 79.7
Msa1007870 MtrunA17_Chr5g0410351 29.341 334 180 16 165 459 539 855 4.45e-15 78.6
Msa1007870 MtrunA17_Chr5g0410351 28.859 149 97 4 42 188 328 469 5.32e-13 72.0
Msa1007870 MtrunA17_Chr3g0101331 25.373 268 175 6 4 247 333 599 5.62e-15 78.2
Msa1007870 MtrunA17_Chr6g0468251 27.692 260 146 7 206 464 221 439 1.21e-14 76.3
Msa1007870 MtrunA17_Chr6g0467921 30.085 236 121 8 231 465 116 308 1.76e-14 75.1
Msa1007870 MtrunA17_Chr4g0071011 35.227 176 102 7 236 405 109 278 1.79e-14 75.9
Msa1007870 MtrunA17_Chr5g0410401 23.188 414 215 13 81 394 239 649 1.99e-14 76.3
Msa1007870 MtrunA17_Chr3g0081191 23.301 309 189 8 7 275 335 635 2.34e-14 76.3
Msa1007870 MtrunA17_Chr5g0414221 34.815 135 64 6 164 275 14 147 2.92e-14 70.1
Msa1007870 MtrunA17_Chr3g0101011 25.949 316 181 11 7 275 346 655 4.61e-14 75.5
Msa1007870 MtrunA17_Chr6g0468261 27.132 258 143 7 206 462 129 342 5.98e-14 73.6
Msa1007870 MtrunA17_Chr5g0410481 31.148 305 175 12 164 445 531 823 6.71e-14 74.7
Msa1007870 MtrunA17_Chr5g0410481 30.380 158 94 5 42 190 309 459 5.33e-13 72.0
Msa1007870 MtrunA17_Chr1g0189271 30.612 147 92 5 4 141 168 313 1.71e-13 71.6
Msa1007870 MtrunA17_Chr6g0469991 54.098 61 28 0 1 61 307 367 1.09e-12 69.7
Msa1007870 MtrunA17_Chr8g0338431 24.818 411 212 15 126 497 1 353 1.52e-12 70.1
Msa1007870 MtrunA17_Chr6g0478721 24.384 406 246 14 1 360 216 606 3.10e-12 69.3
Msa1007870 MtrunA17_Chr2g0309161 37.778 90 53 1 376 465 41 127 3.16e-12 63.9
Msa1007870 MtrunA17_Chr5g0409971 26.638 229 156 7 12 233 327 550 6.96e-12 68.6
Msa1007870 MtrunA17_Chr3g0089441 29.609 179 98 5 229 379 114 292 7.13e-12 68.2
Msa1007870 MtrunA17_Chr1g0149071 23.596 267 170 6 34 292 81 321 8.93e-12 67.4
Msa1007870 MtrunA17_Chr6g0468131 27.350 234 129 4 232 464 159 352 1.16e-11 66.2
Msa1007870 MtrunA17_Chr3g0085711 28.938 273 127 11 227 438 188 454 1.57e-11 67.0
Msa1007870 MtrunA17_Chr2g0282981 37.037 81 49 1 1 79 318 398 5.24e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007870 AT3G14470.1 28.637 433 204 10 1 339 323 744 8.93e-42 160
Msa1007870 AT3G14470.2 28.637 433 204 10 1 339 323 744 8.93e-42 160
Msa1007870 AT3G14460.1 27.655 452 215 13 12 362 329 769 6.12e-37 146
Msa1007870 AT3G07040.1 28.197 305 180 8 7 274 331 633 2.19e-30 126
Msa1007870 AT3G46710.1 28.522 291 184 8 2 275 312 595 7.12e-23 103
Msa1007870 AT3G50950.2 29.260 311 172 10 2 273 308 609 8.66e-21 97.1
Msa1007870 AT3G50950.1 29.260 311 172 10 2 273 308 609 8.66e-21 97.1
Msa1007870 AT3G46730.1 28.322 286 190 6 3 275 318 601 1.98e-20 95.9
Msa1007870 AT3G46530.1 31.633 196 126 5 6 197 320 511 3.91e-20 94.7
Msa1007870 AT5G35450.2 24.242 528 320 19 12 484 319 821 9.27e-20 93.6
Msa1007870 AT5G35450.1 24.242 528 320 19 12 484 319 821 9.27e-20 93.6
Msa1007870 AT4G26090.1 25.164 457 277 15 12 438 310 731 9.74e-20 93.6
Msa1007870 AT1G12220.3 26.207 290 188 7 8 275 188 473 1.44e-18 89.7
Msa1007870 AT1G12220.1 26.207 290 188 7 8 275 309 594 1.54e-18 89.7
Msa1007870 AT1G12220.2 26.207 290 188 7 8 275 309 594 1.54e-18 89.7
Msa1007870 AT5G63020.1 26.298 289 185 7 8 275 307 588 8.66e-17 84.3
Msa1007870 AT1G12290.1 27.027 296 175 11 18 282 318 603 8.94e-17 84.3
Msa1007870 AT1G12290.4 27.027 296 175 11 18 282 276 561 9.32e-17 84.3
Msa1007870 AT1G12290.3 27.027 296 175 11 18 282 276 561 9.32e-17 84.3
Msa1007870 AT1G12290.2 27.027 296 175 11 18 282 276 561 9.32e-17 84.3
Msa1007870 AT4G10780.1 26.645 304 170 10 8 275 306 592 2.46e-16 82.8
Msa1007870 AT4G10780.2 26.645 304 170 10 8 275 306 592 2.54e-16 82.8
Msa1007870 AT1G53350.1 26.087 299 183 9 12 279 319 610 4.91e-16 82.0
Msa1007870 AT4G27190.1 34.682 173 95 6 18 182 308 470 3.42e-15 79.3
Msa1007870 AT1G12210.3 26.460 291 186 10 8 275 267 552 3.74e-15 79.3
Msa1007870 AT1G12210.2 26.460 291 186 10 8 275 267 552 3.74e-15 79.3
Msa1007870 AT1G12210.1 26.460 291 186 10 8 275 309 594 4.15e-15 79.0
Msa1007870 AT1G12280.1 25.904 332 213 12 1 308 302 624 1.61e-14 77.0
Msa1007870 AT1G61190.1 25.087 287 176 10 18 275 316 592 3.13e-14 76.3
Msa1007870 AT1G61190.2 25.087 287 176 10 18 275 316 592 3.41e-14 76.3
Msa1007870 AT1G61190.3 25.087 287 176 10 18 275 316 592 3.41e-14 76.3
Msa1007870 AT1G15890.1 30.114 176 110 7 18 186 316 485 3.50e-14 76.3
Msa1007870 AT1G15890.2 30.114 176 110 7 18 186 156 325 3.87e-14 75.9
Msa1007870 AT1G33560.1 23.830 470 283 18 41 481 324 747 1.73e-13 73.9
Msa1007870 AT1G61300.1 26.056 284 174 12 18 275 204 477 1.83e-13 73.6
Msa1007870 AT1G58400.1 25.773 291 182 8 34 296 338 622 3.09e-13 73.2
Msa1007870 AT1G58400.3 25.773 291 182 8 34 296 348 632 3.38e-13 73.2
Msa1007870 AT1G58400.2 25.773 291 182 8 34 296 348 632 3.38e-13 73.2
Msa1007870 AT1G61180.1 24.828 290 170 12 18 275 315 588 3.41e-13 72.8
Msa1007870 AT1G61180.2 24.828 290 170 12 18 275 315 588 4.07e-13 72.8
Msa1007870 AT5G47250.1 29.798 198 118 6 1 190 302 486 1.14e-12 71.2
Msa1007870 AT1G61300.2 27.528 178 115 6 18 188 204 374 1.18e-12 71.2
Msa1007870 AT1G59780.2 23.390 295 196 7 12 276 307 601 1.60e-12 70.9
Msa1007870 AT1G51480.1 26.910 301 178 13 9 279 306 594 1.62e-12 70.9
Msa1007870 AT1G59780.1 23.390 295 196 7 12 276 312 606 1.64e-12 70.9
Msa1007870 AT1G59620.2 25.987 304 190 12 1 276 169 465 1.96e-12 70.5
Msa1007870 AT5G43740.1 26.351 296 186 13 9 279 304 592 2.06e-12 70.5
Msa1007870 AT5G43740.2 26.351 296 186 13 9 279 304 592 2.06e-12 70.5
Msa1007870 AT4G27220.2 30.159 189 115 6 1 182 269 447 2.28e-12 70.5
Msa1007870 AT4G27220.1 30.159 189 115 6 1 182 261 439 2.33e-12 70.5
Msa1007870 AT1G61190.4 27.528 178 118 6 18 188 316 489 2.60e-12 70.1
Msa1007870 AT5G47260.1 24.845 322 215 10 8 310 297 610 9.78e-12 68.2
Msa1007870 AT5G43730.4 26.667 300 173 13 12 279 308 592 1.11e-11 68.2
Msa1007870 AT5G43730.1 26.667 300 173 13 12 279 308 592 1.11e-11 68.2
Msa1007870 AT5G43730.3 26.667 300 173 13 12 279 308 592 1.11e-11 68.2
Msa1007870 AT5G43730.2 26.667 300 173 13 12 279 308 592 1.11e-11 68.2
Msa1007870 AT5G43730.5 26.667 300 173 13 12 279 308 592 1.11e-11 68.2
Msa1007870 AT1G62630.1 23.499 383 252 13 8 354 305 682 5.73e-11 65.9

Find 97 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTCAATCATTGACATTT+AGG 0.123566 7_1:+7593893 Msa1007870:CDS
CTTGTTTATTATTTCATCTT+TGG 0.176839 7_1:-7592496 None:intergenic
ACATTCACGATATTGAAATT+AGG 0.181419 7_1:+7594133 Msa1007870:CDS
CCTTCAATCATTGACATTTA+GGG 0.209415 7_1:+7593894 Msa1007870:CDS
TCTTGAAGTTGTTGGGTAAA+AGG 0.218295 7_1:-7593423 None:intergenic
TCAAGTTTACCTCCTCAAAT+AGG 0.240358 7_1:+7593150 Msa1007870:CDS
TTCAAGCGTATCAAATTATT+AGG 0.275241 7_1:-7593087 None:intergenic
GATATTGAGACAGATGTATT+TGG 0.287975 7_1:+7592636 Msa1007870:CDS
CATTCACGATATTGAAATTA+GGG 0.299370 7_1:+7594134 Msa1007870:CDS
ATTAGGGAACGCAGGGTTAT+AGG 0.306474 7_1:+7594150 Msa1007870:CDS
TTGTTTAAAGAAAGAGCTTT+TGG 0.312054 7_1:+7592216 Msa1007870:CDS
ACATCCTTACCAGACTCTTT+AGG 0.323527 7_1:+7593931 Msa1007870:CDS
AAACGATGTGAAATGGAAAT+AGG 0.331322 7_1:+7594078 Msa1007870:CDS
TTGTTTATTATTTCATCTTT+GGG 0.335594 7_1:-7592495 None:intergenic
CACATAATTCTTGAAGTTGT+TGG 0.361498 7_1:-7593431 None:intergenic
TCTTTACGTTCTACCTCATT+TGG 0.366858 7_1:-7592240 None:intergenic
ATTGAGCTTTGGATGGCTAA+TGG 0.374753 7_1:+7592528 Msa1007870:CDS
CAAAGGAAGAGGGTTCCTTT+TGG 0.382746 7_1:+7593215 Msa1007870:CDS
AGACGTGGAACGAATTATAT+TGG 0.388643 7_1:+7592598 Msa1007870:CDS
AGCAGTTTCTAATTGAGCTT+TGG 0.389815 7_1:+7592517 Msa1007870:CDS
GGATGAAGAGTCCCAGTTGC+AGG 0.391860 7_1:+7593368 Msa1007870:CDS
CAAGTTTACCTCCTCAAATA+GGG 0.394202 7_1:+7593151 Msa1007870:CDS
ACATAATTCTTGAAGTTGTT+GGG 0.395821 7_1:-7593430 None:intergenic
CCTAGTGTTATTGCTGTAAG+AGG 0.400872 7_1:-7592309 None:intergenic
CTCTTTAGGAAACCTTATCT+TGG 0.403715 7_1:+7593945 Msa1007870:CDS
CTGTCAAGGAAAGCAAACTA+TGG 0.407358 7_1:+7592373 Msa1007870:CDS
AGCTATCTAACAAATATTGT+TGG 0.411949 7_1:+7592190 Msa1007870:CDS
CTTTAGTATCTCCTTTCCTA+TGG 0.420886 7_1:-7592271 None:intergenic
AATTCCATGTTCACTTTCCA+TGG 0.439729 7_1:-7594696 None:intergenic
TGGGGATGCTCAGAAGTAGA+AGG 0.442470 7_1:+7593841 Msa1007870:intron
ATAAGGTTTCCTAAAGAGTC+TGG 0.446734 7_1:-7593940 None:intergenic
GCTATCTAACAAATATTGTT+GGG 0.457601 7_1:+7592191 Msa1007870:CDS
TAGACTCACGCAGTTATTCA+AGG 0.463922 7_1:-7593127 None:intergenic
AAGAGTCTGGTAAGGATGTC+AGG 0.467233 7_1:-7593927 None:intergenic
GTTGGAGAAACGATGTGAAA+TGG 0.470292 7_1:+7594071 Msa1007870:CDS
GATTTATCAATGTCATGAGT+TGG 0.472267 7_1:+7594053 Msa1007870:CDS
GGAGATACTAAAGAAGTGTA+GGG 0.473377 7_1:+7592281 Msa1007870:CDS
TTTGGGAAATAGCGCACATA+AGG 0.473684 7_1:-7592478 None:intergenic
GCGCTTTAAAAGAGAGGAAA+AGG 0.476179 7_1:+7592341 Msa1007870:CDS
TCTGGTAAGGATGTCAGGTT+TGG 0.477957 7_1:-7593922 None:intergenic
TGAACAATTTGCGGTTGTCA+TGG 0.484735 7_1:+7593346 Msa1007870:CDS
AGGAGATACTAAAGAAGTGT+AGG 0.485813 7_1:+7592280 Msa1007870:CDS
CATGTGATAGCAAGCTCTGA+TGG 0.487267 7_1:+7594660 Msa1007870:CDS
TGGACTCTTTCTAATGTACT+AGG 0.491261 7_1:-7592753 None:intergenic
ACTTTGAGCATGTATGTAGT+TGG 0.492682 7_1:+7593192 Msa1007870:CDS
GAAGTCAACTTCCCTATTTG+AGG 0.496701 7_1:-7593162 None:intergenic
GTAAGCACGTGAACAATTTG+CGG 0.501094 7_1:+7593337 Msa1007870:CDS
TTATGTGTGGTAGGATATGC+AGG 0.503045 7_1:+7593447 Msa1007870:CDS
TATGTAGTTGGCAAAGGAAG+AGG 0.504205 7_1:+7593204 Msa1007870:CDS
ATACATGCTCAAAGTCCTCA+TGG 0.505478 7_1:-7593184 None:intergenic
TGCTCAATCAATTTCAGAAG+AGG 0.509904 7_1:+7592701 Msa1007870:CDS
ACTGTCCTAATTCTGCCAAA+AGG 0.510976 7_1:-7593230 None:intergenic
TATTTCATCCAATAAAATGT+TGG 0.517317 7_1:+7592554 Msa1007870:CDS
CCCTAAATGTCAATGATTGA+AGG 0.519001 7_1:-7593894 None:intergenic
GAAATGGAAATAGGAGAGCC+TGG 0.523223 7_1:+7594087 Msa1007870:CDS
ATGTTGGACGAGGAAGATAT+TGG 0.523409 7_1:+7592570 Msa1007870:CDS
CGTAAAGAGCTTGTGGCCAT+AGG 0.533303 7_1:+7592255 Msa1007870:CDS
TGAAAAGACGATTTCACCTA+AGG 0.533950 7_1:+7592788 Msa1007870:CDS
CTTCAAGAATTATGTGTGGT+AGG 0.534743 7_1:+7593438 Msa1007870:CDS
TTTGAAGTGACATCTTCAAT+CGG 0.536067 7_1:+7592936 Msa1007870:CDS
GCTATCACATGAGTTATAGC+TGG 0.546681 7_1:-7594648 None:intergenic
AAAGGAGTGGCCCTCTGTCA+AGG 0.546918 7_1:+7592359 Msa1007870:CDS
GTGAGGCTTTGAATGCTCGT+TGG 0.547232 7_1:-7594012 None:intergenic
AAGATATTGGCAACGAGACG+TGG 0.550229 7_1:+7592583 Msa1007870:CDS
AGCATGTATGTAGTTGGCAA+AGG 0.553359 7_1:+7593198 Msa1007870:CDS
CCTCTTACAGCAATAACACT+AGG 0.557344 7_1:+7592309 Msa1007870:CDS
GTTTCTAATTGAGCTTTGGA+TGG 0.559012 7_1:+7592521 Msa1007870:CDS
CCTAAATGTCAATGATTGAA+GGG 0.562048 7_1:-7593893 None:intergenic
ATCCAATAAAATGTTGGACG+AGG 0.567220 7_1:+7592560 Msa1007870:CDS
TAGTTTGCTTTCCTTGACAG+AGG 0.571448 7_1:-7592370 None:intergenic
GATAGCAAGCTCTGATGGAA+AGG 0.571710 7_1:+7594665 Msa1007870:CDS
TTAAAGATTTCAAACTAGTG+AGG 0.572972 7_1:-7594029 None:intergenic
CATATGAATTGTTGTTCCAG+TGG 0.576436 7_1:-7594625 None:intergenic
GAACAATTTGCGGTTGTCAT+GGG 0.576680 7_1:+7593347 Msa1007870:CDS
AGTTTGCTTTCCTTGACAGA+GGG 0.577397 7_1:-7592369 None:intergenic
GATGCTCAGAAGTAGAAGGT+TGG 0.577833 7_1:+7593845 Msa1007870:intron
CACGTGCTTACTCGACATGT+TGG 0.578479 7_1:-7593325 None:intergenic
GTTTCCTAAAGAGTCTGGTA+AGG 0.579491 7_1:-7593935 None:intergenic
AGAGCTTGTGGCCATAGGAA+AGG 0.589507 7_1:+7592260 Msa1007870:CDS
CCGTGTCAGCTACAGAAGCT+TGG 0.593851 7_1:-7594744 None:intergenic
ATATTGAAATTAGGGAACGC+AGG 0.594400 7_1:+7594142 Msa1007870:CDS
TATTGAAATTAGGGAACGCA+GGG 0.598987 7_1:+7594143 Msa1007870:CDS
ATGGAAAGGAAGATCAGCCA+TGG 0.600773 7_1:+7594679 Msa1007870:CDS
GTCAACTTCCCTATTTGAGG+AGG 0.602783 7_1:-7593159 None:intergenic
TCTCATGCGCTTTAAAAGAG+AGG 0.603764 7_1:+7592335 Msa1007870:CDS
TCAGCCATGGAAAGTGAACA+TGG 0.604825 7_1:+7594692 Msa1007870:CDS
AGAAGTAGAAGGTTGGAATG+AGG 0.610545 7_1:+7593852 Msa1007870:intron
AGCTTTGATATATCATGCGA+AGG 0.615898 7_1:-7592171 None:intergenic
GAGATACTAAAGAAGTGTAG+GGG 0.623679 7_1:+7592282 Msa1007870:CDS
TAGGAGAGCCTGGAGAGCAA+TGG 0.627262 7_1:+7594097 Msa1007870:CDS
ATGTAGTTGGCAAAGGAAGA+GGG 0.632964 7_1:+7593205 Msa1007870:CDS
GGTAGAACGTAAAGAGCTTG+TGG 0.642029 7_1:+7592248 Msa1007870:CDS
GTTGGAAGAGAAATCAACTT+CGG 0.652226 7_1:-7593994 None:intergenic
TGAACATGGAATTTGCAGCA+AGG 0.663342 7_1:+7594706 Msa1007870:CDS
ACAACTTCAAGAATTATGTG+TGG 0.699684 7_1:+7593434 Msa1007870:CDS
TTAAAAGAGAGGAAAAGGAG+TGG 0.710110 7_1:+7592346 Msa1007870:CDS
TAGGGAAGTTGACTTCCATG+AGG 0.734753 7_1:+7593169 Msa1007870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTTTTCATTTTTAAATTA+CGG + chr7_1:7593634-7593653 Msa1007870:intron 10.0%
!! TTGTTTATTATTTCATCTTT+GGG - chr7_1:7592498-7592517 None:intergenic 15.0%
!! TTATACAATAAATCTAAACT+AGG - chr7_1:7594333-7594352 None:intergenic 15.0%
!!! TTTTATGTTTTTTGTTAGAA+AGG + chr7_1:7594385-7594404 Msa1007870:intron 15.0%
!! CTTGTTTATTATTTCATCTT+TGG - chr7_1:7592499-7592518 None:intergenic 20.0%
!! TATTTCATCCAATAAAATGT+TGG + chr7_1:7592554-7592573 Msa1007870:CDS 20.0%
!! AGAAAGAAAATTGAATACAT+TGG - chr7_1:7592892-7592911 None:intergenic 20.0%
!!! TCAAATTATTAGGCAATTTT+TGG - chr7_1:7593080-7593099 None:intergenic 20.0%
! AGCTATCTAACAAATATTGT+TGG + chr7_1:7592190-7592209 Msa1007870:CDS 25.0%
! GCTATCTAACAAATATTGTT+GGG + chr7_1:7592191-7592210 Msa1007870:CDS 25.0%
!! TTGTTTAAAGAAAGAGCTTT+TGG + chr7_1:7592216-7592235 Msa1007870:CDS 25.0%
!!! AAACATTGTCTCATTTTAAC+TGG - chr7_1:7592456-7592475 None:intergenic 25.0%
!!! ATATTGGAGATCATTTTTTC+AGG + chr7_1:7592614-7592633 Msa1007870:CDS 25.0%
! AGAAAATTGAATACATTGGA+TGG - chr7_1:7592888-7592907 None:intergenic 25.0%
!!! TGAAGTGTTTTTAAGGTAAT+TGG + chr7_1:7592964-7592983 Msa1007870:intron 25.0%
! TAAATTCCACAACTTACATA+TGG - chr7_1:7593025-7593044 None:intergenic 25.0%
! TTCAAGCGTATCAAATTATT+AGG - chr7_1:7593090-7593109 None:intergenic 25.0%
! ACATAATTCTTGAAGTTGTT+GGG - chr7_1:7593433-7593452 None:intergenic 25.0%
! TTGCAATTTATGAGACTTAA+TGG - chr7_1:7593522-7593541 None:intergenic 25.0%
! TTAAAGATTTCAAACTAGTG+AGG - chr7_1:7594032-7594051 None:intergenic 25.0%
! ACATTCACGATATTGAAATT+AGG + chr7_1:7594133-7594152 Msa1007870:CDS 25.0%
! CATTCACGATATTGAAATTA+GGG + chr7_1:7594134-7594153 Msa1007870:CDS 25.0%
!!! CTATTGTTATTTATGACTCT+TGG + chr7_1:7594229-7594248 Msa1007870:intron 25.0%
! ATTAATGAGTCCAATTCTAA+GGG + chr7_1:7594546-7594565 Msa1007870:intron 25.0%
!! ATTTTTCTGACCTTAAACAA+AGG - chr7_1:7594605-7594624 None:intergenic 25.0%
GATATTGAGACAGATGTATT+TGG + chr7_1:7592636-7592655 Msa1007870:CDS 30.0%
! TCTTTTCATATGAGATATGG+TGG - chr7_1:7592776-7592795 None:intergenic 30.0%
! TCGTCTTTTCATATGAGATA+TGG - chr7_1:7592779-7592798 None:intergenic 30.0%
TACACAAGATCATATCGTAT+CGG + chr7_1:7592852-7592871 Msa1007870:intron 30.0%
! TTTGAAGTGACATCTTCAAT+CGG + chr7_1:7592936-7592955 Msa1007870:CDS 30.0%
!! GGTCATTTGAAGTGTTTTTA+AGG + chr7_1:7592957-7592976 Msa1007870:intron 30.0%
CACATAATTCTTGAAGTTGT+TGG - chr7_1:7593434-7593453 None:intergenic 30.0%
ACAACTTCAAGAATTATGTG+TGG + chr7_1:7593434-7593453 Msa1007870:CDS 30.0%
GGCTGTAATTGTATTAAAGT+AGG - chr7_1:7593501-7593520 None:intergenic 30.0%
CCTAAATGTCAATGATTGAA+GGG - chr7_1:7593896-7593915 None:intergenic 30.0%
CCTTCAATCATTGACATTTA+GGG + chr7_1:7593894-7593913 Msa1007870:CDS 30.0%
!! CTAGTTTTTGAACCAAGATA+AGG - chr7_1:7593960-7593979 None:intergenic 30.0%
GATTTATCAATGTCATGAGT+TGG + chr7_1:7594053-7594072 Msa1007870:CDS 30.0%
AAACGATGTGAAATGGAAAT+AGG + chr7_1:7594078-7594097 Msa1007870:CDS 30.0%
TTCTGCCTTTGTGTTTATTT+AGG + chr7_1:7594307-7594326 Msa1007870:intron 30.0%
!!! GTTTTTTGTTAGAAAGGAGA+AGG + chr7_1:7594391-7594410 Msa1007870:intron 30.0%
GATTTCACTTGCAAATCAAA+AGG - chr7_1:7594461-7594480 None:intergenic 30.0%
ACATTGTGATAGATAAACCA+AGG + chr7_1:7594523-7594542 Msa1007870:intron 30.0%
GATTAATGAGTCCAATTCTA+AGG + chr7_1:7594545-7594564 Msa1007870:intron 30.0%
! ATTAATTCCGCCTTTGTTTA+AGG + chr7_1:7594592-7594611 Msa1007870:intron 30.0%
! AGCTTTGATATATCATGCGA+AGG - chr7_1:7592174-7592193 None:intergenic 35.0%
TCTTTACGTTCTACCTCATT+TGG - chr7_1:7592243-7592262 None:intergenic 35.0%
CTTTAGTATCTCCTTTCCTA+TGG - chr7_1:7592274-7592293 None:intergenic 35.0%
! AGGAGATACTAAAGAAGTGT+AGG + chr7_1:7592280-7592299 Msa1007870:CDS 35.0%
! GGAGATACTAAAGAAGTGTA+GGG + chr7_1:7592281-7592300 Msa1007870:CDS 35.0%
! GAGATACTAAAGAAGTGTAG+GGG + chr7_1:7592282-7592301 Msa1007870:CDS 35.0%
TTAAAAGAGAGGAAAAGGAG+TGG + chr7_1:7592346-7592365 Msa1007870:CDS 35.0%
AGCAGTTTCTAATTGAGCTT+TGG + chr7_1:7592517-7592536 Msa1007870:CDS 35.0%
!! GTTTCTAATTGAGCTTTGGA+TGG + chr7_1:7592521-7592540 Msa1007870:CDS 35.0%
ATCCAATAAAATGTTGGACG+AGG + chr7_1:7592560-7592579 Msa1007870:CDS 35.0%
! TTCCTCGTCCAACATTTTAT+TGG - chr7_1:7592565-7592584 None:intergenic 35.0%
AGACGTGGAACGAATTATAT+TGG + chr7_1:7592598-7592617 Msa1007870:CDS 35.0%
TGCTCAATCAATTTCAGAAG+AGG + chr7_1:7592701-7592720 Msa1007870:CDS 35.0%
TGGACTCTTTCTAATGTACT+AGG - chr7_1:7592756-7592775 None:intergenic 35.0%
TGAAAAGACGATTTCACCTA+AGG + chr7_1:7592788-7592807 Msa1007870:CDS 35.0%
TCACCTAAGGTAGATTCAAT+CGG + chr7_1:7592801-7592820 Msa1007870:intron 35.0%
TCTTTCTTTACATGTGCTTC+AGG + chr7_1:7592905-7592924 Msa1007870:intron 35.0%
AGGTAATTGGATCTTTCTCA+CGG + chr7_1:7592977-7592996 Msa1007870:intron 35.0%
CACAACTTACATATGGATTC+TGG - chr7_1:7593018-7593037 None:intergenic 35.0%
CAGAATCCATATGTAAGTTG+TGG + chr7_1:7593016-7593035 Msa1007870:intron 35.0%
TCAAGTTTACCTCCTCAAAT+AGG + chr7_1:7593150-7593169 Msa1007870:CDS 35.0%
CAAGTTTACCTCCTCAAATA+GGG + chr7_1:7593151-7593170 Msa1007870:CDS 35.0%
ACTTTGAGCATGTATGTAGT+TGG + chr7_1:7593192-7593211 Msa1007870:CDS 35.0%
TCTTGAAGTTGTTGGGTAAA+AGG - chr7_1:7593426-7593445 None:intergenic 35.0%
CTTCAAGAATTATGTGTGGT+AGG + chr7_1:7593438-7593457 Msa1007870:CDS 35.0%
! AGACATCCATTCTAGGAAAT+GGG - chr7_1:7593475-7593494 None:intergenic 35.0%
! TAGACATCCATTCTAGGAAA+TGG - chr7_1:7593476-7593495 None:intergenic 35.0%
TTTACAACACCTCCCAAAAT+TGG + chr7_1:7593548-7593567 Msa1007870:intron 35.0%
TTACAACACCTCCCAAAATT+GGG + chr7_1:7593549-7593568 Msa1007870:intron 35.0%
! AAGGTAGTTTCCCCAATTTT+GGG - chr7_1:7593563-7593582 None:intergenic 35.0%
TTTGGATTGAAGGTTTAGGA+GGG - chr7_1:7593802-7593821 None:intergenic 35.0%
TGTGTTTGGATTGAAGGTTT+AGG - chr7_1:7593806-7593825 None:intergenic 35.0%
ATGTTCAATTTGGGTGTGTT+TGG - chr7_1:7593820-7593839 None:intergenic 35.0%
ACACACCCAAATTGAACATT+TGG + chr7_1:7593821-7593840 Msa1007870:intron 35.0%
CACACCCAAATTGAACATTT+GGG + chr7_1:7593822-7593841 Msa1007870:intron 35.0%
ACACCCAAATTGAACATTTG+GGG + chr7_1:7593823-7593842 Msa1007870:intron 35.0%
CATCCCCAAATGTTCAATTT+GGG - chr7_1:7593829-7593848 None:intergenic 35.0%
CCCTTCAATCATTGACATTT+AGG + chr7_1:7593893-7593912 Msa1007870:CDS 35.0%
CCCTAAATGTCAATGATTGA+AGG - chr7_1:7593897-7593916 None:intergenic 35.0%
ATAAGGTTTCCTAAAGAGTC+TGG - chr7_1:7593943-7593962 None:intergenic 35.0%
! CTCTTTAGGAAACCTTATCT+TGG + chr7_1:7593945-7593964 Msa1007870:CDS 35.0%
GTTGGAAGAGAAATCAACTT+CGG - chr7_1:7593997-7594016 None:intergenic 35.0%
ATATTGAAATTAGGGAACGC+AGG + chr7_1:7594142-7594161 Msa1007870:CDS 35.0%
TATTGAAATTAGGGAACGCA+GGG + chr7_1:7594143-7594162 Msa1007870:CDS 35.0%
! CAACAAATAGCATTGAGAGT+GGG - chr7_1:7594195-7594214 None:intergenic 35.0%
! ACAACAAATAGCATTGAGAG+TGG - chr7_1:7594196-7594215 None:intergenic 35.0%
!!! TCTTTTTTTTTCTTCGCAGG+AGG + chr7_1:7594269-7594288 Msa1007870:intron 35.0%
CTAGGCCTAAATAAACACAA+AGG - chr7_1:7594315-7594334 None:intergenic 35.0%
TTCACTTGCAAATCAAAAGG+TGG - chr7_1:7594458-7594477 None:intergenic 35.0%
GAATTGGACTCATTAATCCT+TGG - chr7_1:7594543-7594562 None:intergenic 35.0%
TCTGAATGAACCCTTAGAAT+TGG - chr7_1:7594559-7594578 None:intergenic 35.0%
GCGGAATTAATTGATGTAAC+AGG - chr7_1:7594583-7594602 None:intergenic 35.0%
TTTCTGACCTTAAACAAAGG+CGG - chr7_1:7594602-7594621 None:intergenic 35.0%
TTAAGGTCAGAAAAATCCAC+TGG + chr7_1:7594609-7594628 Msa1007870:intron 35.0%
! CATATGAATTGTTGTTCCAG+TGG - chr7_1:7594628-7594647 None:intergenic 35.0%
AATTCCATGTTCACTTTCCA+TGG - chr7_1:7594699-7594718 None:intergenic 35.0%
! AAGAGCTTTTGGACCAAATG+AGG + chr7_1:7592227-7592246 Msa1007870:CDS 40.0%
! CCTAGTGTTATTGCTGTAAG+AGG - chr7_1:7592312-7592331 None:intergenic 40.0%
CCTCTTACAGCAATAACACT+AGG + chr7_1:7592309-7592328 Msa1007870:CDS 40.0%
!! TCTCATGCGCTTTAAAAGAG+AGG + chr7_1:7592335-7592354 Msa1007870:CDS 40.0%
!! GCGCTTTAAAAGAGAGGAAA+AGG + chr7_1:7592341-7592360 Msa1007870:CDS 40.0%
! AGTTTGCTTTCCTTGACAGA+GGG - chr7_1:7592372-7592391 None:intergenic 40.0%
!! TAGTTTGCTTTCCTTGACAG+AGG - chr7_1:7592373-7592392 None:intergenic 40.0%
CTGTCAAGGAAAGCAAACTA+TGG + chr7_1:7592373-7592392 Msa1007870:CDS 40.0%
TTTGGGAAATAGCGCACATA+AGG - chr7_1:7592481-7592500 None:intergenic 40.0%
!! ATTGAGCTTTGGATGGCTAA+TGG + chr7_1:7592528-7592547 Msa1007870:CDS 40.0%
ATGTTGGACGAGGAAGATAT+TGG + chr7_1:7592570-7592589 Msa1007870:CDS 40.0%
CACCTAAGGTAGATTCAATC+GGG + chr7_1:7592802-7592821 Msa1007870:intron 40.0%
ATCCCGATTGAATCTACCTT+AGG - chr7_1:7592807-7592826 None:intergenic 40.0%
TGTGTAGCATCAAATCACTG+AGG + chr7_1:7592826-7592845 Msa1007870:intron 40.0%
TAGACTCACGCAGTTATTCA+AGG - chr7_1:7593130-7593149 None:intergenic 40.0%
GAAGTCAACTTCCCTATTTG+AGG - chr7_1:7593165-7593184 None:intergenic 40.0%
ATACATGCTCAAAGTCCTCA+TGG - chr7_1:7593187-7593206 None:intergenic 40.0%
AGCATGTATGTAGTTGGCAA+AGG + chr7_1:7593198-7593217 Msa1007870:CDS 40.0%
TATGTAGTTGGCAAAGGAAG+AGG + chr7_1:7593204-7593223 Msa1007870:CDS 40.0%
ATGTAGTTGGCAAAGGAAGA+GGG + chr7_1:7593205-7593224 Msa1007870:CDS 40.0%
ACTGTCCTAATTCTGCCAAA+AGG - chr7_1:7593233-7593252 None:intergenic 40.0%
! CTACACTTTTCACTCTCTCA+AGG - chr7_1:7593290-7593309 None:intergenic 40.0%
GTAAGCACGTGAACAATTTG+CGG + chr7_1:7593337-7593356 Msa1007870:CDS 40.0%
TGAACAATTTGCGGTTGTCA+TGG + chr7_1:7593346-7593365 Msa1007870:CDS 40.0%
GAACAATTTGCGGTTGTCAT+GGG + chr7_1:7593347-7593366 Msa1007870:CDS 40.0%
! CTCAACATTTTCCTGCAACT+GGG - chr7_1:7593382-7593401 None:intergenic 40.0%
TTATGTGTGGTAGGATATGC+AGG + chr7_1:7593447-7593466 Msa1007870:CDS 40.0%
TAGGACTAGACATCCATTCT+AGG - chr7_1:7593482-7593501 None:intergenic 40.0%
TACAACACCTCCCAAAATTG+GGG + chr7_1:7593550-7593569 Msa1007870:intron 40.0%
! GAAGGTAGTTTCCCCAATTT+TGG - chr7_1:7593564-7593583 None:intergenic 40.0%
GTCTGTTTGGATAGGGTTTA+GGG + chr7_1:7593591-7593610 Msa1007870:intron 40.0%
TCTGTTTGGATAGGGTTTAG+GGG + chr7_1:7593592-7593611 Msa1007870:intron 40.0%
TTGGATTGAAGGTTTAGGAG+GGG - chr7_1:7593801-7593820 None:intergenic 40.0%
GTTTGGATTGAAGGTTTAGG+AGG - chr7_1:7593803-7593822 None:intergenic 40.0%
TTTGGGTGTGTTTGGATTGA+AGG - chr7_1:7593812-7593831 None:intergenic 40.0%
GCATCCCCAAATGTTCAATT+TGG - chr7_1:7593830-7593849 None:intergenic 40.0%
AGAAGTAGAAGGTTGGAATG+AGG + chr7_1:7593852-7593871 Msa1007870:intron 40.0%
ACATCCTTACCAGACTCTTT+AGG + chr7_1:7593931-7593950 Msa1007870:CDS 40.0%
GTTTCCTAAAGAGTCTGGTA+AGG - chr7_1:7593938-7593957 None:intergenic 40.0%
GTTGGAGAAACGATGTGAAA+TGG + chr7_1:7594071-7594090 Msa1007870:CDS 40.0%
! ATTTTTGACCATTGCTCTCC+AGG - chr7_1:7594108-7594127 None:intergenic 40.0%
!!! CGCTCTTTTTTTTTCTTCGC+AGG + chr7_1:7594266-7594285 Msa1007870:intron 40.0%
GCAAATCAAAAGGTGGTTGA+AGG - chr7_1:7594451-7594470 None:intergenic 40.0%
TCGCGAATTCAATCTATGTG+AGG + chr7_1:7594479-7594498 Msa1007870:intron 40.0%
GCTATCACATGAGTTATAGC+TGG - chr7_1:7594651-7594670 None:intergenic 40.0%
TGAACATGGAATTTGCAGCA+AGG + chr7_1:7594706-7594725 Msa1007870:CDS 40.0%
GGTAGAACGTAAAGAGCTTG+TGG + chr7_1:7592248-7592267 Msa1007870:CDS 45.0%
AAGATATTGGCAACGAGACG+TGG + chr7_1:7592583-7592602 Msa1007870:CDS 45.0%
GTCAACTTCCCTATTTGAGG+AGG - chr7_1:7593162-7593181 None:intergenic 45.0%
! TAGGGAAGTTGACTTCCATG+AGG + chr7_1:7593169-7593188 Msa1007870:CDS 45.0%
! CAAAGGAAGAGGGTTCCTTT+TGG + chr7_1:7593215-7593234 Msa1007870:CDS 45.0%
! GGGTTCCTTTTGGCAGAATT+AGG + chr7_1:7593225-7593244 Msa1007870:CDS 45.0%
! GCTCAACATTTTCCTGCAAC+TGG - chr7_1:7593383-7593402 None:intergenic 45.0%
CAGGTTCCCATTTCCTAGAA+TGG + chr7_1:7593466-7593485 Msa1007870:intron 45.0%
! GTAGTTTCCCCAATTTTGGG+AGG - chr7_1:7593560-7593579 None:intergenic 45.0%
TCTGAGGGTCTGTTTGGATA+GGG + chr7_1:7593584-7593603 Msa1007870:intron 45.0%
GGTCTGTTTGGATAGGGTTT+AGG + chr7_1:7593590-7593609 Msa1007870:intron 45.0%
CTGTTTGGATAGGGTTTAGG+GGG + chr7_1:7593593-7593612 Msa1007870:intron 45.0%
TGTTTGGATAGGGTTTAGGG+GGG + chr7_1:7593594-7593613 Msa1007870:intron 45.0%
GATGCTCAGAAGTAGAAGGT+TGG + chr7_1:7593845-7593864 Msa1007870:intron 45.0%
TCTGGTAAGGATGTCAGGTT+TGG - chr7_1:7593925-7593944 None:intergenic 45.0%
AAGAGTCTGGTAAGGATGTC+AGG - chr7_1:7593930-7593949 None:intergenic 45.0%
GAAATGGAAATAGGAGAGCC+TGG + chr7_1:7594087-7594106 Msa1007870:CDS 45.0%
ATTAGGGAACGCAGGGTTAT+AGG + chr7_1:7594150-7594169 Msa1007870:CDS 45.0%
AAGGTGGTTGAAGGAGTGAT+GGG - chr7_1:7594442-7594461 None:intergenic 45.0%
AAAGGTGGTTGAAGGAGTGA+TGG - chr7_1:7594443-7594462 None:intergenic 45.0%
! CATGTGATAGCAAGCTCTGA+TGG + chr7_1:7594660-7594679 Msa1007870:CDS 45.0%
! GATAGCAAGCTCTGATGGAA+AGG + chr7_1:7594665-7594684 Msa1007870:CDS 45.0%
ATGGAAAGGAAGATCAGCCA+TGG + chr7_1:7594679-7594698 Msa1007870:CDS 45.0%
TCAGCCATGGAAAGTGAACA+TGG + chr7_1:7594692-7594711 Msa1007870:CDS 45.0%
CGTAAAGAGCTTGTGGCCAT+AGG + chr7_1:7592255-7592274 Msa1007870:CDS 50.0%
AGAGCTTGTGGCCATAGGAA+AGG + chr7_1:7592260-7592279 Msa1007870:CDS 50.0%
CACGTGCTTACTCGACATGT+TGG - chr7_1:7593328-7593347 None:intergenic 50.0%
TGGGGAAACTACCTTCTCTG+AGG + chr7_1:7593568-7593587 Msa1007870:intron 50.0%
GGGGAAACTACCTTCTCTGA+GGG + chr7_1:7593569-7593588 Msa1007870:intron 50.0%
! ACCTTCTCTGAGGGTCTGTT+TGG + chr7_1:7593578-7593597 Msa1007870:intron 50.0%
TCCAAACAGACCCTCAGAGA+AGG - chr7_1:7593582-7593601 None:intergenic 50.0%
! CTCTGAGGGTCTGTTTGGAT+AGG + chr7_1:7593583-7593602 Msa1007870:intron 50.0%
GTTTGGATAGGGTTTAGGGG+GGG + chr7_1:7593595-7593614 Msa1007870:intron 50.0%
AGGTTTAGGAGGGGAAGAGA+GGG - chr7_1:7593792-7593811 None:intergenic 50.0%
AAGGTTTAGGAGGGGAAGAG+AGG - chr7_1:7593793-7593812 None:intergenic 50.0%
TGGGGATGCTCAGAAGTAGA+AGG + chr7_1:7593841-7593860 Msa1007870:intron 50.0%
!! GTGAGGCTTTGAATGCTCGT+TGG - chr7_1:7594015-7594034 None:intergenic 50.0%
!! GGCATTAGAAGTGCTTGCAG+AGG - chr7_1:7594421-7594440 None:intergenic 50.0%
AAAGGAGTGGCCCTCTGTCA+AGG + chr7_1:7592359-7592378 Msa1007870:CDS 55.0%
GGATGAAGAGTCCCAGTTGC+AGG + chr7_1:7593368-7593387 Msa1007870:CDS 55.0%
GATAGGGTTTAGGGGGGGAA+GGG + chr7_1:7593600-7593619 Msa1007870:intron 55.0%
GGTTTAGGAGGGGAAGAGAG+GGG - chr7_1:7593791-7593810 None:intergenic 55.0%
TAGGAGAGCCTGGAGAGCAA+TGG + chr7_1:7594097-7594116 Msa1007870:CDS 55.0%
GGATAGGGTTTAGGGGGGGA+AGG + chr7_1:7593599-7593618 Msa1007870:intron 60.0%
TAGGAGGGGAAGAGAGGGGA+GGG - chr7_1:7593787-7593806 None:intergenic 60.0%
TTAGGAGGGGAAGAGAGGGG+AGG - chr7_1:7593788-7593807 None:intergenic 60.0%
AGGGTTTAGGGGGGGAAGGG+AGG + chr7_1:7593603-7593622 Msa1007870:intron 65.0%
GGGTTTAGGGGGGGAAGGGA+GGG + chr7_1:7593604-7593623 Msa1007870:intron 65.0%
GGTTTAGGGGGGGAAGGGAG+GGG + chr7_1:7593605-7593624 Msa1007870:intron 65.0%
TTAGGGGGGGAAGGGAGGGG+TGG + chr7_1:7593608-7593627 Msa1007870:intron 70.0%
TAGGGGGGGAAGGGAGGGGT+GGG + chr7_1:7593609-7593628 Msa1007870:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 7592159 7594761 7592159 ID=Msa1007870;Name=Msa1007870
chr7_1 mRNA 7592159 7594761 7592159 ID=Msa1007870-mRNA-1;Parent=Msa1007870;Name=Msa1007870-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|0.5|1|1|6|0|528
chr7_1 exon 7592159 7592809 7592159 ID=Msa1007870-mRNA-1:exon:2301;Parent=Msa1007870-mRNA-1
chr7_1 exon 7592927 7592957 7592927 ID=Msa1007870-mRNA-1:exon:2302;Parent=Msa1007870-mRNA-1
chr7_1 exon 7593061 7593468 7593061 ID=Msa1007870-mRNA-1:exon:2303;Parent=Msa1007870-mRNA-1
chr7_1 exon 7593854 7594171 7593854 ID=Msa1007870-mRNA-1:exon:2304;Parent=Msa1007870-mRNA-1
chr7_1 exon 7594288 7594318 7594288 ID=Msa1007870-mRNA-1:exon:2305;Parent=Msa1007870-mRNA-1
chr7_1 exon 7594614 7594761 7594614 ID=Msa1007870-mRNA-1:exon:2306;Parent=Msa1007870-mRNA-1
chr7_1 CDS 7592159 7592809 7592159 ID=Msa1007870-mRNA-1:cds;Parent=Msa1007870-mRNA-1
chr7_1 CDS 7592927 7592957 7592927 ID=Msa1007870-mRNA-1:cds;Parent=Msa1007870-mRNA-1
chr7_1 CDS 7593061 7593468 7593061 ID=Msa1007870-mRNA-1:cds;Parent=Msa1007870-mRNA-1
chr7_1 CDS 7593854 7594171 7593854 ID=Msa1007870-mRNA-1:cds;Parent=Msa1007870-mRNA-1
chr7_1 CDS 7594288 7594318 7594288 ID=Msa1007870-mRNA-1:cds;Parent=Msa1007870-mRNA-1
chr7_1 CDS 7594614 7594761 7594614 ID=Msa1007870-mRNA-1:cds;Parent=Msa1007870-mRNA-1
Gene Sequence

>Msa1007870

ATGCGAACAATACCTTCGCATGATATATCAAAGCTATCTAACAAATATTGTTGGGAATTGTTTAAAGAAAGAGCTTTTGGACCAAATGAGGTAGAACGTAAAGAGCTTGTGGCCATAGGAAAGGAGATACTAAAGAAGTGTAGGGGAGTGCCTCTTACAGCAATAACACTAGGAAGTCTCATGCGCTTTAAAAGAGAGGAAAAGGAGTGGCCCTCTGTCAAGGAAAGCAAACTATGGAGTTTACAAGATGAAGATTATGTCATGCATGTGTTGAGATTAAGTTACTTGAATTTTCCAGTTAAAATGAGACAATGTTTTGCCTTATGTGCGCTATTTCCCAAAGATGAAATAATAAACAAGCAGTTTCTAATTGAGCTTTGGATGGCTAATGGCTTTATTTCATCCAATAAAATGTTGGACGAGGAAGATATTGGCAACGAGACGTGGAACGAATTATATTGGAGATCATTTTTTCAGGATATTGAGACAGATGTATTTGGCAAAATTACAAGTTTCAAGATGCACGATCTTGTTCACGATCTTGCTCAATCAATTTCAGAAGAGGTGCGTTGCATTTCATCAGACGATGACATGCCTAGTACATTAGAAAGAGTCCACCATATCTCATATGAAAAGACGATTTCACCTAAGGTCACTTTATTTGAAGTGACATCTTCAATCGACAGTTGTAGAAAGCTCCAAAAATTGCCTAATAATTTGATACGCTTGAAAGCTCTACAACATCTATCCTTGAATAACTGCGTGAGTCTATCAAGTTTACCTCCTCAAATAGGGAAGTTGACTTCCATGAGGACTTTGAGCATGTATGTAGTTGGCAAAGGAAGAGGGTTCCTTTTGGCAGAATTAGGACAGTTAAATTTCAAAATAGATAAGTTTCACATCAAGCACCTTGAGAGAGTGAAAAGTGTAGAAGATGCTAAAGAAGCCAACATGTCGAGTAAGCACGTGAACAATTTGCGGTTGTCATGGGATGAAGAGTCCCAGTTGCAGGAAAATGTTGAGCAGCTTCTTGAAGTACTTCAACCTTTTACCCAACAACTTCAAGAATTATGTGTGGTAGGATATGCAGAAGTAGAAGGTTGGAATGAGGCTCTAAATCACATGACTTCCCTTCAATCATTGACATTTAGGGTTCTTCCAAACCTGACATCCTTACCAGACTCTTTAGGAAACCTTATCTTGGTTCAAAAACTAGATATTATACATTGTCCGAAGTTGATTTCTCTTCCAACGAGCATTCAAAGCCTCACTAGTTTGAAATCTTTAATGATTTATCAATGTCATGAGTTGGAGAAACGATGTGAAATGGAAATAGGAGAGCCTGGAGAGCAATGGTCAAAAATATCTCACATTCACGATATTGAAATTAGGGAACGCAGGGTTATAGGAGGTGTTTTTTCTGCGCTTTCTGCCTTTGTGTCAGAAAAATCCACTGGAACAACAATTCATATGCCAGCTATAACTCATGTGATAGCAAGCTCTGATGGAAAGGAAGATCAGCCATGGAAAGTGAACATGGAATTTGCAGCAAGGAAAGACTATTTCTCACCAAGCTTCTGTAGCTGA
Protein sequence

>Msa1007870

MRTIPSHDISKLSNKYCWELFKERAFGPNEVERKELVAIGKEILKKCRGVPLTAITLGSLMRFKREEKEWPSVKESKLWSLQDEDYVMHVLRLSYLNFPVKMRQCFALCALFPKDEIINKQFLIELWMANGFISSNKMLDEEDIGNETWNELYWRSFFQDIETDVFGKITSFKMHDLVHDLAQSISEEVRCISSDDDMPSTLERVHHISYEKTISPKVTLFEVTSSIDSCRKLQKLPNNLIRLKALQHLSLNNCVSLSSLPPQIGKLTSMRTLSMYVVGKGRGFLLAELGQLNFKIDKFHIKHLERVKSVEDAKEANMSSKHVNNLRLSWDEESQLQENVEQLLEVLQPFTQQLQELCVVGYAEVEGWNEALNHMTSLQSLTFRVLPNLTSLPDSLGNLILVQKLDIIHCPKLISLPTSIQSLTSLKSLMIYQCHELEKRCEMEIGEPGEQWSKISHIHDIEIRERRVIGGVFSALSAFVSEKSTGTTIHMPAITHVIASSDGKEDQPWKVNMEFAARKDYFSPSFCS*