Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138560 | KEH21690.1 | 88.640 | 713 | 81 | 0 | 1 | 713 | 1 | 713 | 0.0 | 1200 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138560 | sp|Q9S823|LNG2_ARATH | 30.280 | 535 | 262 | 21 | 194 | 696 | 205 | 660 | 2.31e-33 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138560 | A0A072U760 | 88.640 | 713 | 81 | 0 | 1 | 713 | 1 | 713 | 0.0 | 1200 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0205840 | Msa1138560 | 0.805015 | 1.637174e-49 | -8.615850e-47 |
| Msa0248970 | Msa1138560 | 0.802286 | 6.028423e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138560 | MtrunA17_Chr7g0219501 | 88.293 | 709 | 83 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1183 |
| Msa1138560 | MtrunA17_Chr6g0454791 | 43.989 | 757 | 272 | 22 | 1 | 705 | 1 | 657 | 4.46e-152 | 465 |
| Msa1138560 | MtrunA17_Chr3g0087021 | 30.545 | 825 | 419 | 30 | 1 | 693 | 1 | 803 | 3.12e-50 | 190 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138560 | AT1G74160.1 | 31.644 | 809 | 413 | 33 | 1 | 717 | 1 | 761 | 1.29e-60 | 221 |
| Msa1138560 | AT1G74160.3 | 30.896 | 670 | 342 | 29 | 124 | 717 | 5 | 629 | 1.11e-43 | 170 |
| Msa1138560 | AT1G74160.2 | 30.896 | 670 | 342 | 29 | 124 | 717 | 5 | 629 | 1.11e-43 | 170 |
| Msa1138560 | AT1G18620.4 | 29.457 | 774 | 397 | 35 | 1 | 699 | 1 | 700 | 1.28e-36 | 148 |
| Msa1138560 | AT1G18620.1 | 29.457 | 774 | 397 | 35 | 1 | 699 | 1 | 700 | 1.28e-36 | 148 |
| Msa1138560 | AT1G18620.3 | 29.457 | 774 | 397 | 35 | 1 | 699 | 1 | 700 | 1.28e-36 | 148 |
| Msa1138560 | AT3G02170.2 | 30.654 | 535 | 260 | 22 | 194 | 696 | 205 | 660 | 1.48e-34 | 140 |
| Msa1138560 | AT3G02170.1 | 30.280 | 535 | 262 | 21 | 194 | 696 | 205 | 660 | 2.35e-34 | 141 |
| Msa1138560 | AT1G18620.2 | 29.227 | 763 | 391 | 35 | 12 | 699 | 48 | 736 | 3.94e-33 | 137 |
| Msa1138560 | AT5G15580.1 | 31.579 | 570 | 274 | 27 | 194 | 729 | 204 | 691 | 1.40e-31 | 132 |
| Msa1138560 | AT3G02170.3 | 29.098 | 488 | 242 | 21 | 194 | 656 | 205 | 613 | 9.58e-25 | 110 |
| Msa1138560 | AT1G18620.5 | 28.976 | 635 | 322 | 32 | 121 | 699 | 1 | 562 | 4.72e-23 | 105 |
Find 118 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTCTTTGTTGCCATTAT+TGG | 0.132998 | 7_4:-8103134 | None:intergenic |
| CAAATAGATACAACAAATTT+AGG | 0.178482 | 7_4:-8105358 | None:intergenic |
| CTTTCCCTTCAAACAATCTT+TGG | 0.187462 | 7_4:-8101012 | None:intergenic |
| AATCTTGTAACAAAGAATTT+TGG | 0.218385 | 7_4:-8104093 | None:intergenic |
| CAGGATAGAGATGAATATTT+TGG | 0.218585 | 7_4:+8104853 | Msa1138560:CDS |
| AAGTGCTCTTAGATCCTTTC+CGG | 0.221905 | 7_4:-8104215 | None:intergenic |
| TTCTGTAGAAGGAGGATTAT+TGG | 0.233519 | 7_4:-8104452 | None:intergenic |
| AAGCCTTCTCTTTCTGTATA+TGG | 0.253219 | 7_4:+8104151 | Msa1138560:CDS |
| CAAATCAAACTTCCATTTGT+TGG | 0.276978 | 7_4:-8104514 | None:intergenic |
| CTCGGACTTTGAACTTTAGA+AGG | 0.290816 | 7_4:-8104316 | None:intergenic |
| CAAGAATTGCAGAAGCAAAT+TGG | 0.303246 | 7_4:+8101078 | Msa1138560:CDS |
| AATGTCATTTCTTCAGATTT+TGG | 0.303330 | 7_4:+8104916 | Msa1138560:CDS |
| TCTCTCAAATTAATCTCTTC+AGG | 0.306758 | 7_4:+8100491 | Msa1138560:five_prime_UTR |
| CGAAGACTAGAGAAGAAGTT+TGG | 0.311614 | 7_4:+8104700 | Msa1138560:CDS |
| TCTTGATGCTGCATTCTATA+AGG | 0.327767 | 7_4:+8105178 | Msa1138560:CDS |
| TAATTATTCTGTTAAATTCA+TGG | 0.328523 | 7_4:-8103358 | None:intergenic |
| GGTTCCTTCGAAACTATAAT+AGG | 0.329871 | 7_4:-8103572 | None:intergenic |
| AACAAATTTAGGATTCATAT+TGG | 0.330493 | 7_4:-8105347 | None:intergenic |
| CTCTCAGGTGTAACCAATAA+TGG | 0.335900 | 7_4:+8103121 | Msa1138560:intron |
| TTGGTTTCTCTGTCTGTGTT+TGG | 0.343073 | 7_4:-8100451 | None:intergenic |
| ATGTGAATCGTATCTCAATT+TGG | 0.358844 | 7_4:+8105307 | Msa1138560:CDS |
| TCTTGAAATTTGAATTTGTT+TGG | 0.368975 | 7_4:-8103399 | None:intergenic |
| GTTGAGGATGGAACACTCTA+AGG | 0.383373 | 7_4:+8105112 | Msa1138560:CDS |
| TGGTGTCCCTGAGGAATAGA+AGG | 0.386215 | 7_4:+8103987 | Msa1138560:CDS |
| GAAATCCACTACAAGGTCTA+AGG | 0.386251 | 7_4:+8103661 | Msa1138560:CDS |
| TTTGCATCAGGTTGCCTCCT+AGG | 0.386829 | 7_4:-8104070 | None:intergenic |
| AAGCAAATTGGTTGCATCAC+TGG | 0.387194 | 7_4:+8101090 | Msa1138560:CDS |
| ATACAAGAAACAACAAAGTT+TGG | 0.394649 | 7_4:+8103967 | Msa1138560:CDS |
| GGTTGCCTCCTAGGAGTTGT+TGG | 0.394725 | 7_4:-8104061 | None:intergenic |
| TATCATCCCTTCTATTCCTC+AGG | 0.397229 | 7_4:-8103994 | None:intergenic |
| CTCCAGGACTCAACGCAAAC+TGG | 0.402528 | 7_4:+8103881 | Msa1138560:CDS |
| TTCGAAACTATAATAGGCCT+TGG | 0.402849 | 7_4:-8103566 | None:intergenic |
| TCTAGCGTAAATCGTGTAGA+TGG | 0.413155 | 7_4:-8104037 | None:intergenic |
| AGAAAATGTTCTCCAACAAA+TGG | 0.426374 | 7_4:+8104502 | Msa1138560:CDS |
| AATTACTTCTATGTCACCTT+GGG | 0.433189 | 7_4:-8104959 | None:intergenic |
| AATTATTCTGTTAAATTCAT+GGG | 0.433971 | 7_4:-8103357 | None:intergenic |
| CAATCGGTAATTTACTACCT+TGG | 0.435147 | 7_4:-8104396 | None:intergenic |
| GGAGCTTCCTAGGCTTTCCT+TGG | 0.438625 | 7_4:+8103682 | Msa1138560:CDS |
| AAGGCTCGCAACGTGTCTAA+TGG | 0.438841 | 7_4:+8103746 | Msa1138560:CDS |
| TGAATTGACAGTTCTGTAGA+AGG | 0.442642 | 7_4:-8104463 | None:intergenic |
| ATTCAGAATGCATCTTCTTC+AGG | 0.444082 | 7_4:+8101171 | Msa1138560:CDS |
| CAGTGTTGTAGCTAAGTTGA+TGG | 0.450049 | 7_4:+8103847 | Msa1138560:CDS |
| CAAGGTCTAAGGAGCTTCCT+AGG | 0.455011 | 7_4:+8103672 | Msa1138560:CDS |
| TTGGTGAGATGAATTCTCAT+TGG | 0.470866 | 7_4:+8104872 | Msa1138560:CDS |
| AGTAATTCAGCTCGATCAAT+CGG | 0.482866 | 7_4:+8104975 | Msa1138560:CDS |
| AAATCTCCTCAAGAAATGAA+TGG | 0.491733 | 7_4:+8104658 | Msa1138560:CDS |
| AAAGTTACCACAGAACCGTT+TGG | 0.492963 | 7_4:+8104571 | Msa1138560:CDS |
| TGAATCCAAAGATTGTTTGA+AGG | 0.495015 | 7_4:+8101007 | Msa1138560:five_prime_UTR |
| GACTTTGAAAGAGTATGTAA+TGG | 0.495408 | 7_4:-8103593 | None:intergenic |
| CTCTAGTCTTCGACTAGCTA+TGG | 0.495800 | 7_4:-8104689 | None:intergenic |
| GATCGCCACCGTTTCATCAC+AGG | 0.501681 | 7_4:+8101129 | Msa1138560:CDS |
| CATGAATCTCTTCTTGAATG+TGG | 0.507184 | 7_4:+8105384 | Msa1138560:three_prime_UTR |
| GAATTACTTCTATGTCACCT+TGG | 0.511835 | 7_4:-8104960 | None:intergenic |
| GTGAGATGAATTCTCATTGG+AGG | 0.513302 | 7_4:+8104875 | Msa1138560:CDS |
| AAAAGGTTTGAAATCTATGA+AGG | 0.514019 | 7_4:+8101047 | Msa1138560:CDS |
| TACTTCTATGTCACCTTGGG+TGG | 0.518392 | 7_4:-8104956 | None:intergenic |
| GCAGCATCAAGAACAGATAC+AGG | 0.519318 | 7_4:-8105167 | None:intergenic |
| GTATCCATTCGAGGGATTGA+CGG | 0.519979 | 7_4:+8103716 | Msa1138560:CDS |
| GAAAGAACTTGTTGACCAAA+CGG | 0.520018 | 7_4:-8104586 | None:intergenic |
| CAATGCATAGAGAAGCTAAA+GGG | 0.523631 | 7_4:+8103471 | Msa1138560:CDS |
| CAGATTCATCATCTGACACT+AGG | 0.524133 | 7_4:+8104269 | Msa1138560:CDS |
| CGCTAGAACCAACAACTCCT+AGG | 0.525041 | 7_4:+8104053 | Msa1138560:CDS |
| TACATTTGAAGAGTTGAGGA+TGG | 0.526661 | 7_4:+8105100 | Msa1138560:CDS |
| ACAAAGTTTCTCTATTTCGC+AGG | 0.527414 | 7_4:+8104834 | Msa1138560:CDS |
| AGATGCATTCTGAATGTACT+TGG | 0.527695 | 7_4:-8101163 | None:intergenic |
| GAATCCAAAGATTGTTTGAA+GGG | 0.530380 | 7_4:+8101008 | Msa1138560:five_prime_UTR |
| TATATGGCGAAATTGAGAAA+AGG | 0.530544 | 7_4:+8104167 | Msa1138560:CDS |
| AGAAGAAGTTTGGATTTGAG+AGG | 0.531043 | 7_4:+8104710 | Msa1138560:CDS |
| GATGGGACTAGAAGCTCTCC+AGG | 0.532515 | 7_4:+8103865 | Msa1138560:CDS |
| TGCGTTGTCCTGTGATGAAA+CGG | 0.534782 | 7_4:-8101137 | None:intergenic |
| AGAATACATTTGAAGAGTTG+AGG | 0.535315 | 7_4:+8105096 | Msa1138560:intron |
| TTTGTTACAAGATTCTTCAA+AGG | 0.540816 | 7_4:+8104102 | Msa1138560:CDS |
| GGATACTTGCTTGCTGTCCA+AGG | 0.547001 | 7_4:-8103699 | None:intergenic |
| TTAATCGTGGAATCCGATGA+TGG | 0.549934 | 7_4:-8104751 | None:intergenic |
| GAACTCGAGTTCAAGAAGTC+CGG | 0.551027 | 7_4:+8104196 | Msa1138560:CDS |
| AATTGAATTGTGAACTGTCA+TGG | 0.560787 | 7_4:+8105264 | Msa1138560:CDS |
| AAAACATAATAGCCAACTTG+TGG | 0.561343 | 7_4:+8104780 | Msa1138560:CDS |
| CTACCTTGGATAGTATTCGA+CGG | 0.562236 | 7_4:-8104382 | None:intergenic |
| AAGGCCTATTATAGTTTCGA+AGG | 0.565486 | 7_4:+8103568 | Msa1138560:CDS |
| AGCAAGCAAGTATCCATTCG+AGG | 0.566880 | 7_4:+8103707 | Msa1138560:CDS |
| TTGTTGACCAAACGGTTCTG+TGG | 0.573849 | 7_4:-8104578 | None:intergenic |
| ATCATCCCTTCTATTCCTCA+GGG | 0.574169 | 7_4:-8103993 | None:intergenic |
| TCCTCCGTCAATCCCTCGAA+TGG | 0.576252 | 7_4:-8103720 | None:intergenic |
| AAGCTCCTTAGACCTTGTAG+TGG | 0.584866 | 7_4:-8103666 | None:intergenic |
| AACAGAAACTTGGCCACCCA+AGG | 0.586913 | 7_4:+8104943 | Msa1138560:CDS |
| TGCACCAACTAGTCCATCAT+CGG | 0.588433 | 7_4:+8104738 | Msa1138560:CDS |
| TCGCCATATACAGAAAGAGA+AGG | 0.593211 | 7_4:-8104154 | None:intergenic |
| GAATCCGATGATGGACTAGT+TGG | 0.594180 | 7_4:-8104742 | None:intergenic |
| AGGGATTGACGGAGGAAACA+AGG | 0.594531 | 7_4:+8103727 | Msa1138560:CDS |
| CGAAATTGAGAAAAGGTTGG+CGG | 0.595113 | 7_4:+8104174 | Msa1138560:CDS |
| CATCAACTTAGCTACAACAC+TGG | 0.595182 | 7_4:-8103846 | None:intergenic |
| AGTGTTGTAGCTAAGTTGAT+GGG | 0.596949 | 7_4:+8103848 | Msa1138560:CDS |
| GCCTTGGAGAATCTACGCGT+TGG | 0.602148 | 7_4:-8103550 | None:intergenic |
| TCAATGCATAGAGAAGCTAA+AGG | 0.608861 | 7_4:+8103470 | Msa1138560:CDS |
| ATGCATTGAAATCCACTACA+AGG | 0.611699 | 7_4:+8103654 | Msa1138560:CDS |
| CTCAACCATGACAAAAGCCG+AGG | 0.612544 | 7_4:-8104359 | None:intergenic |
| AGAAGTTACTGATGATTCTG+TGG | 0.613843 | 7_4:-8103300 | None:intergenic |
| TGGCGAAATTGAGAAAAGGT+TGG | 0.614918 | 7_4:+8104171 | Msa1138560:CDS |
| TCAAGAACAGATACAGGACT+TGG | 0.615930 | 7_4:-8105161 | None:intergenic |
| GTGTCTAATGGCTTGCAAAG+AGG | 0.622380 | 7_4:+8103758 | Msa1138560:CDS |
| AAGTAGACAACTCCACAAGT+TGG | 0.630781 | 7_4:-8104792 | None:intergenic |
| ATTGACAGTTCTGTAGAAGG+AGG | 0.634786 | 7_4:-8104460 | None:intergenic |
| TGTAAGCACAAAACCAACAA+AGG | 0.635277 | 7_4:+8104417 | Msa1138560:CDS |
| GCAAGCAAGTATCCATTCGA+GGG | 0.638775 | 7_4:+8103708 | Msa1138560:CDS |
| CGAGTTCAAGAAGTCCGGAA+AGG | 0.641472 | 7_4:+8104201 | Msa1138560:CDS |
| AGGACTCAACGCAAACTGGT+CGG | 0.652441 | 7_4:+8103885 | Msa1138560:CDS |
| GGTGTCCCTGAGGAATAGAA+GGG | 0.658565 | 7_4:+8103988 | Msa1138560:CDS |
| TCAACCATGACAAAAGCCGA+GGG | 0.659967 | 7_4:-8104358 | None:intergenic |
| AACAAAGTTTGGTGTCCCTG+AGG | 0.666437 | 7_4:+8103978 | Msa1138560:CDS |
| TTGCTGTCCAAGGAAAGCCT+AGG | 0.670792 | 7_4:-8103689 | None:intergenic |
| TAGAACCAACAACTCCTAGG+AGG | 0.674743 | 7_4:+8104056 | Msa1138560:CDS |
| TCCATTCGAGGGATTGACGG+AGG | 0.685118 | 7_4:+8103719 | Msa1138560:CDS |
| GCTTGCAAAGAGGATATGAG+AGG | 0.687570 | 7_4:+8103768 | Msa1138560:CDS |
| ACCAACGCGTAGATTCTCCA+AGG | 0.688284 | 7_4:+8103549 | Msa1138560:CDS |
| TAATACAATACAGAAACCAA+AGG | 0.689382 | 7_4:+8103159 | Msa1138560:CDS |
| TGAGAGGAACTCGAGCACAA+TGG | 0.691640 | 7_4:+8103784 | Msa1138560:CDS |
| AATGCATCATAAGAGAGTCG+CGG | 0.702250 | 7_4:-8103638 | None:intergenic |
| GTTGTCCTGTGATGAAACGG+TGG | 0.730923 | 7_4:-8101134 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATAATTTTTTTTAGTG+TGG | + | chr7_4:8100859-8100878 | Msa1138560:intron | 10.0% |
| !!! | CTTTGTATTTTTTATTTTTT+TGG | + | chr7_4:8101211-8101230 | Msa1138560:intron | 10.0% |
| !! | TTTAATAAAAGGTAATTATT+GGG | - | chr7_4:8102165-8102184 | None:intergenic | 10.0% |
| !!! | TTTTAATAAAAGGTAATTAT+TGG | - | chr7_4:8102166-8102185 | None:intergenic | 10.0% |
| !! | AAAATATATTATGATCAATT+TGG | + | chr7_4:8102565-8102584 | Msa1138560:intron | 10.0% |
| !!! | CTTTTATATTATTGTAAATG+TGG | + | chr7_4:8100616-8100635 | Msa1138560:intron | 15.0% |
| !!! | ATTTTTTTTATATGTGTATC+CGG | - | chr7_4:8100703-8100722 | None:intergenic | 15.0% |
| !! | AATTATATTTAAGGAAAATG+TGG | - | chr7_4:8100849-8100868 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTTACATTCATTA+AGG | + | chr7_4:8100965-8100984 | Msa1138560:intron | 15.0% |
| !!! | TTTTCTTTTACATTCATTAA+GGG | + | chr7_4:8100966-8100985 | Msa1138560:intron | 15.0% |
| !!! | TTTTCTTTTGATATTTTTTG+AGG | + | chr7_4:8101670-8101689 | Msa1138560:intron | 15.0% |
| !! | TTAATAAAAGGTAATTATTG+GGG | - | chr7_4:8102164-8102183 | None:intergenic | 15.0% |
| !! | AATTATTCTGTTAAATTCAT+GGG | - | chr7_4:8103360-8103379 | None:intergenic | 15.0% |
| !! | TAATTATTCTGTTAAATTCA+TGG | - | chr7_4:8103361-8103380 | None:intergenic | 15.0% |
| !!! | ACATTCTTTTTTTTTTTTGT+TGG | + | chr7_4:8105071-8105090 | Msa1138560:intron | 15.0% |
| !! | TTATAGTCAATTTACTACTA+TGG | + | chr7_4:8100759-8100778 | Msa1138560:intron | 20.0% |
| !! | GAAAGAAAAATGTCAAAAAA+AGG | + | chr7_4:8101030-8101049 | Msa1138560:exon | 20.0% |
| !!! | GAAAGTATAAAAATTCACAA+TGG | - | chr7_4:8101907-8101926 | None:intergenic | 20.0% |
| !! | TATGTTAAAATCTACATAGA+AGG | - | chr7_4:8101943-8101962 | None:intergenic | 20.0% |
| !!! | ATTATGAAATTTGTTTGACA+AGG | + | chr7_4:8101973-8101992 | Msa1138560:intron | 20.0% |
| !!! | TTATGAAATTTGTTTGACAA+GGG | + | chr7_4:8101974-8101993 | Msa1138560:intron | 20.0% |
| !! | AAATATACGACAAATATCTA+AGG | - | chr7_4:8102039-8102058 | None:intergenic | 20.0% |
| !!! | AGATATTTGTCGTATATTTT+TGG | + | chr7_4:8102040-8102059 | Msa1138560:intron | 20.0% |
| !! | TAATAAAAGGTAATTATTGG+GGG | - | chr7_4:8102163-8102182 | None:intergenic | 20.0% |
| !! | AGTCTATAGGAAAAAAATTA+TGG | - | chr7_4:8102370-8102389 | None:intergenic | 20.0% |
| !! | TATACTAAAAAGTTAGATGA+GGG | - | chr7_4:8102977-8102996 | None:intergenic | 20.0% |
| !! | TTATACTAAAAAGTTAGATG+AGG | - | chr7_4:8102978-8102997 | None:intergenic | 20.0% |
| !! | TATAAATTCTCCTTATAACA+AGG | + | chr7_4:8102993-8103012 | Msa1138560:intron | 20.0% |
| !!! | TATTTTATTGCCTTGTTATA+AGG | - | chr7_4:8103006-8103025 | None:intergenic | 20.0% |
| !! | TAGTTTATTTATCTTACCTT+TGG | - | chr7_4:8103178-8103197 | None:intergenic | 20.0% |
| !!! | TCTTGAAATTTGAATTTGTT+TGG | - | chr7_4:8103402-8103421 | None:intergenic | 20.0% |
| !! | ATTAACCAAACAAGAAAAAA+AGG | + | chr7_4:8103508-8103527 | Msa1138560:CDS | 20.0% |
| !! | TTAACCAAACAAGAAAAAAA+GGG | + | chr7_4:8103509-8103528 | Msa1138560:CDS | 20.0% |
| !!! | AATCTTGTAACAAAGAATTT+TGG | - | chr7_4:8104096-8104115 | None:intergenic | 20.0% |
| !! | AAAAAAGAATGTTTAACAGT+TGG | - | chr7_4:8105063-8105082 | None:intergenic | 20.0% |
| !!! | AACAAATTTAGGATTCATAT+TGG | - | chr7_4:8105350-8105369 | None:intergenic | 20.0% |
| !! | CAAATAGATACAACAAATTT+AGG | - | chr7_4:8105361-8105380 | None:intergenic | 20.0% |
| !!! | CTCTTCATAGTTTTAAATAG+CGG | + | chr7_4:8100581-8100600 | Msa1138560:intron | 25.0% |
| !! | TATAATTTGCATATGAATGC+TGG | - | chr7_4:8100744-8100763 | None:intergenic | 25.0% |
| !! | AAAAGGTTTGAAATCTATGA+AGG | + | chr7_4:8101047-8101066 | Msa1138560:CDS | 25.0% |
| ! | CTAAAAATTTGCCTTAAACA+TGG | - | chr7_4:8101358-8101377 | None:intergenic | 25.0% |
| !!! | GTCTAAAACGATTGTTTTAA+TGG | + | chr7_4:8101692-8101711 | Msa1138560:intron | 25.0% |
| ! | ATGACTCATGTTACTAATTA+TGG | - | chr7_4:8101817-8101836 | None:intergenic | 25.0% |
| ! | TAAAATCTACATAGAAGGAA+AGG | - | chr7_4:8101938-8101957 | None:intergenic | 25.0% |
| !!! | TTTTGGCTGGTTTAATAAAA+AGG | + | chr7_4:8102057-8102076 | Msa1138560:intron | 25.0% |
| ! | ATAAAAAGGTTCTCATATGA+TGG | + | chr7_4:8102071-8102090 | Msa1138560:intron | 25.0% |
| !! | ATATGATGGAGAAATTTCTT+AGG | + | chr7_4:8102085-8102104 | Msa1138560:intron | 25.0% |
| !!! | TTCCTATAGACTTTTGTTTT+TGG | + | chr7_4:8102378-8102397 | Msa1138560:intron | 25.0% |
| ! | AACCAAAAACAAAAGTCTAT+AGG | - | chr7_4:8102383-8102402 | None:intergenic | 25.0% |
| ! | TATATGGTTCAAATTCCATT+TGG | + | chr7_4:8102476-8102495 | Msa1138560:intron | 25.0% |
| !!! | TTGGCTTACAAAAGTTTTAT+AGG | + | chr7_4:8102584-8102603 | Msa1138560:intron | 25.0% |
| ! | ATAGATTATAGAATCTACTC+AGG | - | chr7_4:8102616-8102635 | None:intergenic | 25.0% |
| ! | AATAAGTCAACTTTGTATCT+TGG | - | chr7_4:8102649-8102668 | None:intergenic | 25.0% |
| !! | AGATACAAAGTTGACTTATT+TGG | + | chr7_4:8102649-8102668 | Msa1138560:intron | 25.0% |
| ! | TAGATATGAATCATATCTTG+AGG | - | chr7_4:8102698-8102717 | None:intergenic | 25.0% |
| !! | ATAATTCGACGTTTTTATAG+AGG | + | chr7_4:8102790-8102809 | Msa1138560:intron | 25.0% |
| !! | TAATTCGACGTTTTTATAGA+GGG | + | chr7_4:8102791-8102810 | Msa1138560:intron | 25.0% |
| ! | GATATTTGAACAACACAAAA+AGG | + | chr7_4:8102816-8102835 | Msa1138560:intron | 25.0% |
| ! | TGTATTCTCTAACTCAAAAT+TGG | + | chr7_4:8103033-8103052 | Msa1138560:intron | 25.0% |
| ! | TAATACAATACAGAAACCAA+AGG | + | chr7_4:8103159-8103178 | Msa1138560:CDS | 25.0% |
| ! | ATACAAGAAACAACAAAGTT+TGG | + | chr7_4:8103967-8103986 | Msa1138560:CDS | 25.0% |
| ! | TTTGTTACAAGATTCTTCAA+AGG | + | chr7_4:8104102-8104121 | Msa1138560:CDS | 25.0% |
| !!! | AATGTCATTTCTTCAGATTT+TGG | + | chr7_4:8104916-8104935 | Msa1138560:CDS | 25.0% |
| ! | TCGAACGTTTCAAAAAATTT+AGG | + | chr7_4:8105230-8105249 | Msa1138560:CDS | 25.0% |
| AAACCAAAAACATCTCTTCT+TGG | + | chr7_4:8100467-8100486 | Msa1138560:five_prime_UTR | 30.0% | |
| TCTCTCAAATTAATCTCTTC+AGG | + | chr7_4:8100491-8100510 | Msa1138560:five_prime_UTR | 30.0% | |
| AAAGAGAATGGATAAAAGTG+AGG | - | chr7_4:8100523-8100542 | None:intergenic | 30.0% | |
| TCATTCTATTCTTCCATCAA+AGG | + | chr7_4:8100553-8100572 | Msa1138560:intron | 30.0% | |
| ! | CATACCGCAATTTAAAACTA+TGG | + | chr7_4:8100663-8100682 | Msa1138560:intron | 30.0% |
| !!! | CGAACCATAGTTTTAAATTG+CGG | - | chr7_4:8100670-8100689 | None:intergenic | 30.0% |
| ATGGTATTAAATTGTAGTCG+CGG | - | chr7_4:8100891-8100910 | None:intergenic | 30.0% | |
| GAAATATAGCAACAATGTCA+TGG | - | chr7_4:8100910-8100929 | None:intergenic | 30.0% | |
| TGAATCCAAAGATTGTTTGA+AGG | + | chr7_4:8101007-8101026 | Msa1138560:five_prime_UTR | 30.0% | |
| GAATCCAAAGATTGTTTGAA+GGG | + | chr7_4:8101008-8101027 | Msa1138560:five_prime_UTR | 30.0% | |
| AACTCGATTGAAAATGCAAT+TGG | + | chr7_4:8101260-8101279 | Msa1138560:intron | 30.0% | |
| ! | CGATATTTGGTAACAAAGTT+CGG | + | chr7_4:8101292-8101311 | Msa1138560:intron | 30.0% |
| TCAATTATATCGAGGGTTTA+TGG | + | chr7_4:8101755-8101774 | Msa1138560:intron | 30.0% | |
| !! | TGTTTGACAAGGGTATTAAA+AGG | + | chr7_4:8101984-8102003 | Msa1138560:intron | 30.0% |
| !! | CAAGGGTATTAAAAGGAAAA+AGG | + | chr7_4:8101991-8102010 | Msa1138560:intron | 30.0% |
| !!! | ATTTGTCGTATATTTTTGGC+TGG | + | chr7_4:8102044-8102063 | Msa1138560:intron | 30.0% |
| !!! | TTTTGTTTTTGGTTCTGAAG+AGG | + | chr7_4:8102389-8102408 | Msa1138560:intron | 30.0% |
| TCAGTGATAAGAGTTTAACT+TGG | + | chr7_4:8102442-8102461 | Msa1138560:intron | 30.0% | |
| !! | GATAAGAGTTTAACTTGGTA+AGG | + | chr7_4:8102447-8102466 | Msa1138560:intron | 30.0% |
| CTTGGTAAGGTCAAATTATA+TGG | + | chr7_4:8102460-8102479 | Msa1138560:intron | 30.0% | |
| CTATCACTTAAGAGTTATGA+AGG | + | chr7_4:8102760-8102779 | Msa1138560:intron | 30.0% | |
| ! | TCAAGTGATACTTTTGAATG+TGG | - | chr7_4:8103428-8103447 | None:intergenic | 30.0% |
| !!! | ATGACCCTTTTTTTCTTGTT+TGG | - | chr7_4:8103516-8103535 | None:intergenic | 30.0% |
| AAACAAGAAAAAAAGGGTCA+TGG | + | chr7_4:8103515-8103534 | Msa1138560:CDS | 30.0% | |
| ! | GACTTTGAAAGAGTATGTAA+TGG | - | chr7_4:8103596-8103615 | None:intergenic | 30.0% |
| ! | AAAGTCGAAAAAAGCACATT+GGG | + | chr7_4:8103610-8103629 | Msa1138560:CDS | 30.0% |
| !! | TATGATCTCGTTTTTATCTG+TGG | - | chr7_4:8103924-8103943 | None:intergenic | 30.0% |
| !!! | AAAGAATTTTGGTTTGCATC+AGG | - | chr7_4:8104085-8104104 | None:intergenic | 30.0% |
| TATATGGCGAAATTGAGAAA+AGG | + | chr7_4:8104167-8104186 | Msa1138560:CDS | 30.0% | |
| !! | AAGTCTTTTTGTTGTCTTCT+CGG | - | chr7_4:8104337-8104356 | None:intergenic | 30.0% |
| AGAAAATGTTCTCCAACAAA+TGG | + | chr7_4:8104502-8104521 | Msa1138560:CDS | 30.0% | |
| CAAATCAAACTTCCATTTGT+TGG | - | chr7_4:8104517-8104536 | None:intergenic | 30.0% | |
| ATTTGCAAGCAAAAAGCTAA+AGG | + | chr7_4:8104532-8104551 | Msa1138560:CDS | 30.0% | |
| ! | AAGCAAAAAGCTAAAGGTAT+TGG | + | chr7_4:8104538-8104557 | Msa1138560:CDS | 30.0% |
| AAATCTCCTCAAGAAATGAA+TGG | + | chr7_4:8104658-8104677 | Msa1138560:CDS | 30.0% | |
| ! | TTTTGTCCATTCATTTCTTG+AGG | - | chr7_4:8104667-8104686 | None:intergenic | 30.0% |
| ! | ATGTTTTCTTCTGTTAATCG+TGG | - | chr7_4:8104767-8104786 | None:intergenic | 30.0% |
| AAAACATAATAGCCAACTTG+TGG | + | chr7_4:8104780-8104799 | Msa1138560:CDS | 30.0% | |
| AATTACTTCTATGTCACCTT+GGG | - | chr7_4:8104962-8104981 | None:intergenic | 30.0% | |
| GAAATCTAACTAACAATGCA+AGG | - | chr7_4:8105031-8105050 | None:intergenic | 30.0% | |
| AGAATACATTTGAAGAGTTG+AGG | + | chr7_4:8105096-8105115 | Msa1138560:intron | 30.0% | |
| AATTGAATTGTGAACTGTCA+TGG | + | chr7_4:8105264-8105283 | Msa1138560:CDS | 30.0% | |
| ATGTGAATCGTATCTCAATT+TGG | + | chr7_4:8105307-8105326 | Msa1138560:CDS | 30.0% | |
| ! | GAACCAAGAAGAGATGTTTT+TGG | - | chr7_4:8100473-8100492 | None:intergenic | 35.0% |
| GAAAGAGAGAAGAAAGAGAA+TGG | - | chr7_4:8100535-8100554 | None:intergenic | 35.0% | |
| ATGAAGAGAATGTCCTTTGA+TGG | - | chr7_4:8100569-8100588 | None:intergenic | 35.0% | |
| TTATATGTGTATCCGGTGAA+TGG | - | chr7_4:8100696-8100715 | None:intergenic | 35.0% | |
| TTAAATTGTAGTCGCGGTTA+AGG | - | chr7_4:8100885-8100904 | None:intergenic | 35.0% | |
| CTTTCCCTTCAAACAATCTT+TGG | - | chr7_4:8101015-8101034 | None:intergenic | 35.0% | |
| CAAGAATTGCAGAAGCAAAT+TGG | + | chr7_4:8101078-8101097 | Msa1138560:CDS | 35.0% | |
| AGATGCATTCTGAATGTACT+TGG | - | chr7_4:8101166-8101185 | None:intergenic | 35.0% | |
| ATTCAGAATGCATCTTCTTC+AGG | + | chr7_4:8101171-8101190 | Msa1138560:CDS | 35.0% | |
| TTGGCGAAATACACGATATT+TGG | + | chr7_4:8101279-8101298 | Msa1138560:intron | 35.0% | |
| CCTTAAACATGGATATGTGT+TGG | - | chr7_4:8101347-8101366 | None:intergenic | 35.0% | |
| CCAACACATATCCATGTTTA+AGG | + | chr7_4:8101344-8101363 | Msa1138560:intron | 35.0% | |
| ACCGTCTTTCAATTATATCG+AGG | + | chr7_4:8101747-8101766 | Msa1138560:intron | 35.0% | |
| CCCTCGATATAATTGAAAGA+CGG | - | chr7_4:8101751-8101770 | None:intergenic | 35.0% | |
| CCGTCTTTCAATTATATCGA+GGG | + | chr7_4:8101748-8101767 | Msa1138560:intron | 35.0% | |
| GGTATTAAAAGGAAAAAGGC+TGG | + | chr7_4:8101995-8102014 | Msa1138560:intron | 35.0% | |
| ! | AGAACGTACGCTAGAAATTT+TGG | + | chr7_4:8102130-8102149 | Msa1138560:intron | 35.0% |
| TAACAGACTAGTATGAAGAG+TGG | - | chr7_4:8102211-8102230 | None:intergenic | 35.0% | |
| CTAAGACTTGAATGACCAAA+TGG | - | chr7_4:8102494-8102513 | None:intergenic | 35.0% | |
| ! | CAAAATTTTGTTCCTCTCTC+AGG | + | chr7_4:8103106-8103125 | Msa1138560:intron | 35.0% |
| AAGCTCTTTGTTGCCATTAT+TGG | - | chr7_4:8103137-8103156 | None:intergenic | 35.0% | |
| TAACATGTGACTATGAATGC+AGG | + | chr7_4:8103238-8103257 | Msa1138560:intron | 35.0% | |
| AGAAGTTACTGATGATTCTG+TGG | - | chr7_4:8103303-8103322 | None:intergenic | 35.0% | |
| TCAATGCATAGAGAAGCTAA+AGG | + | chr7_4:8103470-8103489 | Msa1138560:CDS | 35.0% | |
| CAATGCATAGAGAAGCTAAA+GGG | + | chr7_4:8103471-8103490 | Msa1138560:CDS | 35.0% | |
| TTCGAAACTATAATAGGCCT+TGG | - | chr7_4:8103569-8103588 | None:intergenic | 35.0% | |
| AAGGCCTATTATAGTTTCGA+AGG | + | chr7_4:8103568-8103587 | Msa1138560:CDS | 35.0% | |
| GGTTCCTTCGAAACTATAAT+AGG | - | chr7_4:8103575-8103594 | None:intergenic | 35.0% | |
| ! | CAAAGTCGAAAAAAGCACAT+TGG | + | chr7_4:8103609-8103628 | Msa1138560:CDS | 35.0% |
| ATGCATTGAAATCCACTACA+AGG | + | chr7_4:8103654-8103673 | Msa1138560:CDS | 35.0% | |
| ! | GACGATCTTTTTGATGTTTC+TGG | - | chr7_4:8103827-8103846 | None:intergenic | 35.0% |
| !! | AGTGTTGTAGCTAAGTTGAT+GGG | + | chr7_4:8103848-8103867 | Msa1138560:CDS | 35.0% |
| AAGCCTTCTCTTTCTGTATA+TGG | + | chr7_4:8104151-8104170 | Msa1138560:CDS | 35.0% | |
| CAATCGGTAATTTACTACCT+TGG | - | chr7_4:8104399-8104418 | None:intergenic | 35.0% | |
| !!! | GTTGGTTTTGTGCTTACAAT+CGG | - | chr7_4:8104415-8104434 | None:intergenic | 35.0% |
| TGTAAGCACAAAACCAACAA+AGG | + | chr7_4:8104417-8104436 | Msa1138560:CDS | 35.0% | |
| !!! | GCTTTTCTAGTTACCTTTGT+TGG | - | chr7_4:8104433-8104452 | None:intergenic | 35.0% |
| TTCTGTAGAAGGAGGATTAT+TGG | - | chr7_4:8104455-8104474 | None:intergenic | 35.0% | |
| TGAATTGACAGTTCTGTAGA+AGG | - | chr7_4:8104466-8104485 | None:intergenic | 35.0% | |
| !! | GAAAGAACTTGTTGACCAAA+CGG | - | chr7_4:8104589-8104608 | None:intergenic | 35.0% |
| AGAAGAAGTTTGGATTTGAG+AGG | + | chr7_4:8104710-8104729 | Msa1138560:CDS | 35.0% | |
| ACAAAGTTTCTCTATTTCGC+AGG | + | chr7_4:8104834-8104853 | Msa1138560:CDS | 35.0% | |
| GAATTACTTCTATGTCACCT+TGG | - | chr7_4:8104963-8104982 | None:intergenic | 35.0% | |
| AGTAATTCAGCTCGATCAAT+CGG | + | chr7_4:8104975-8104994 | Msa1138560:CDS | 35.0% | |
| TACATTTGAAGAGTTGAGGA+TGG | + | chr7_4:8105100-8105119 | Msa1138560:CDS | 35.0% | |
| TCTTGATGCTGCATTCTATA+AGG | + | chr7_4:8105178-8105197 | Msa1138560:CDS | 35.0% | |
| CATGAATCTCTTCTTGAATG+TGG | + | chr7_4:8105384-8105403 | Msa1138560:three_prime_UTR | 35.0% | |
| TTGGTTTCTCTGTCTGTGTT+TGG | - | chr7_4:8100454-8100473 | None:intergenic | 40.0% | |
| GCGGTATGCAACTACAATTT+CGG | - | chr7_4:8100651-8100670 | None:intergenic | 40.0% | |
| ! | GGACGAAGCATTTGAAATTG+CGG | - | chr7_4:8100828-8100847 | None:intergenic | 40.0% |
| AAGCAAATTGGTTGCATCAC+TGG | + | chr7_4:8101090-8101109 | Msa1138560:CDS | 40.0% | |
| ACAATTGTGTTTACGTCTGC+AGG | + | chr7_4:8101315-8101334 | Msa1138560:intron | 40.0% | |
| CAATTGTGTTTACGTCTGCA+GGG | + | chr7_4:8101316-8101335 | Msa1138560:intron | 40.0% | |
| AACATGGATATGTGTTGGAC+CGG | - | chr7_4:8101342-8101361 | None:intergenic | 40.0% | |
| AGGAAAAAGGCTGGATGTAA+AGG | + | chr7_4:8102004-8102023 | Msa1138560:intron | 40.0% | |
| ! | TTATTGGTTACACCTGAGAG+AGG | - | chr7_4:8103121-8103140 | None:intergenic | 40.0% |
| CTCTCAGGTGTAACCAATAA+TGG | + | chr7_4:8103121-8103140 | Msa1138560:intron | 40.0% | |
| AATGCATCATAAGAGAGTCG+CGG | - | chr7_4:8103641-8103660 | None:intergenic | 40.0% | |
| GAAATCCACTACAAGGTCTA+AGG | + | chr7_4:8103661-8103680 | Msa1138560:CDS | 40.0% | |
| CATCAACTTAGCTACAACAC+TGG | - | chr7_4:8103849-8103868 | None:intergenic | 40.0% | |
| ! | CAGTGTTGTAGCTAAGTTGA+TGG | + | chr7_4:8103847-8103866 | Msa1138560:CDS | 40.0% |
| ATCATCCCTTCTATTCCTCA+GGG | - | chr7_4:8103996-8104015 | None:intergenic | 40.0% | |
| TATCATCCCTTCTATTCCTC+AGG | - | chr7_4:8103997-8104016 | None:intergenic | 40.0% | |
| TCTAGCGTAAATCGTGTAGA+TGG | - | chr7_4:8104040-8104059 | None:intergenic | 40.0% | |
| TCGCCATATACAGAAAGAGA+AGG | - | chr7_4:8104157-8104176 | None:intergenic | 40.0% | |
| TGGCGAAATTGAGAAAAGGT+TGG | + | chr7_4:8104171-8104190 | Msa1138560:CDS | 40.0% | |
| CGAAATTGAGAAAAGGTTGG+CGG | + | chr7_4:8104174-8104193 | Msa1138560:CDS | 40.0% | |
| AAGTGCTCTTAGATCCTTTC+CGG | - | chr7_4:8104218-8104237 | None:intergenic | 40.0% | |
| CAGATTCATCATCTGACACT+AGG | + | chr7_4:8104269-8104288 | Msa1138560:CDS | 40.0% | |
| CTCGGACTTTGAACTTTAGA+AGG | - | chr7_4:8104319-8104338 | None:intergenic | 40.0% | |
| ACAACAAAAAGACTTGCCCT+CGG | + | chr7_4:8104342-8104361 | Msa1138560:CDS | 40.0% | |
| CTACCTTGGATAGTATTCGA+CGG | - | chr7_4:8104385-8104404 | None:intergenic | 40.0% | |
| ATTGACAGTTCTGTAGAAGG+AGG | - | chr7_4:8104463-8104482 | None:intergenic | 40.0% | |
| AAAGTTACCACAGAACCGTT+TGG | + | chr7_4:8104571-8104590 | Msa1138560:CDS | 40.0% | |
| CGAAGACTAGAGAAGAAGTT+TGG | + | chr7_4:8104700-8104719 | Msa1138560:CDS | 40.0% | |
| TTAATCGTGGAATCCGATGA+TGG | - | chr7_4:8104754-8104773 | None:intergenic | 40.0% | |
| AAGTAGACAACTCCACAAGT+TGG | - | chr7_4:8104795-8104814 | None:intergenic | 40.0% | |
| ! | TTTTGGCAGCAACAGAAACT+TGG | + | chr7_4:8104933-8104952 | Msa1138560:CDS | 40.0% |
| TCAAGAACAGATACAGGACT+TGG | - | chr7_4:8105164-8105183 | None:intergenic | 40.0% | |
| ! | GATTTCGTTTTCACTGGAGA+TGG | - | chr7_4:8105212-8105231 | None:intergenic | 40.0% |
| ! | ACGTTCGATTTCGTTTTCAC+TGG | - | chr7_4:8105218-8105237 | None:intergenic | 40.0% |
| TATGTGTATCCGGTGAATGG+AGG | - | chr7_4:8100693-8100712 | None:intergenic | 45.0% | |
| ! | CATTTGAAATTGCGGTTGCG+AGG | - | chr7_4:8100820-8100839 | None:intergenic | 45.0% |
| TGCGTTGTCCTGTGATGAAA+CGG | - | chr7_4:8101140-8101159 | None:intergenic | 45.0% | |
| AAGCTCCTTAGACCTTGTAG+TGG | - | chr7_4:8103669-8103688 | None:intergenic | 45.0% | |
| AGCAAGCAAGTATCCATTCG+AGG | + | chr7_4:8103707-8103726 | Msa1138560:CDS | 45.0% | |
| GCAAGCAAGTATCCATTCGA+GGG | + | chr7_4:8103708-8103727 | Msa1138560:CDS | 45.0% | |
| GTATCCATTCGAGGGATTGA+CGG | + | chr7_4:8103716-8103735 | Msa1138560:CDS | 45.0% | |
| ! | GTGTCTAATGGCTTGCAAAG+AGG | + | chr7_4:8103758-8103777 | Msa1138560:CDS | 45.0% |
| GCTTGCAAAGAGGATATGAG+AGG | + | chr7_4:8103768-8103787 | Msa1138560:CDS | 45.0% | |
| !! | AACAAAGTTTGGTGTCCCTG+AGG | + | chr7_4:8103978-8103997 | Msa1138560:CDS | 45.0% |
| TAGAACCAACAACTCCTAGG+AGG | + | chr7_4:8104056-8104075 | Msa1138560:CDS | 45.0% | |
| GAACTCGAGTTCAAGAAGTC+CGG | + | chr7_4:8104196-8104215 | Msa1138560:CDS | 45.0% | |
| TCAACCATGACAAAAGCCGA+GGG | - | chr7_4:8104361-8104380 | None:intergenic | 45.0% | |
| TTGTTGACCAAACGGTTCTG+TGG | - | chr7_4:8104581-8104600 | None:intergenic | 45.0% | |
| ! | CTCTAGTCTTCGACTAGCTA+TGG | - | chr7_4:8104692-8104711 | None:intergenic | 45.0% |
| TGCACCAACTAGTCCATCAT+CGG | + | chr7_4:8104738-8104757 | Msa1138560:CDS | 45.0% | |
| !! | GAATCCGATGATGGACTAGT+TGG | - | chr7_4:8104745-8104764 | None:intergenic | 45.0% |
| TACTTCTATGTCACCTTGGG+TGG | - | chr7_4:8104959-8104978 | None:intergenic | 45.0% | |
| GTTGAGGATGGAACACTCTA+AGG | + | chr7_4:8105112-8105131 | Msa1138560:CDS | 45.0% | |
| GCAGCATCAAGAACAGATAC+AGG | - | chr7_4:8105170-8105189 | None:intergenic | 45.0% | |
| ! | TTCGTTTTCACTGGAGATGG+CGG | - | chr7_4:8105209-8105228 | None:intergenic | 45.0% |
| !! | ACTAAAAAAAATTATATTTA+AGG | - | chr7_4:8100858-8100877 | None:intergenic | 5.0% |
| !!! | TTTTTTTGTTTTTTAATAAA+AGG | - | chr7_4:8102176-8102195 | None:intergenic | 5.0% |
| TATGGTTCGCCTCCATTCAC+CGG | + | chr7_4:8100681-8100700 | Msa1138560:intron | 50.0% | |
| GTTGTCCTGTGATGAAACGG+TGG | - | chr7_4:8101137-8101156 | None:intergenic | 50.0% | |
| AAGACGGTCGAAGTTGCTCA+AGG | - | chr7_4:8101735-8101754 | None:intergenic | 50.0% | |
| ACCAACGCGTAGATTCTCCA+AGG | + | chr7_4:8103549-8103568 | Msa1138560:CDS | 50.0% | |
| CAAGGTCTAAGGAGCTTCCT+AGG | + | chr7_4:8103672-8103691 | Msa1138560:CDS | 50.0% | |
| TTGCTGTCCAAGGAAAGCCT+AGG | - | chr7_4:8103692-8103711 | None:intergenic | 50.0% | |
| !! | GGATACTTGCTTGCTGTCCA+AGG | - | chr7_4:8103702-8103721 | None:intergenic | 50.0% |
| AGGGATTGACGGAGGAAACA+AGG | + | chr7_4:8103727-8103746 | Msa1138560:CDS | 50.0% | |
| AAGGCTCGCAACGTGTCTAA+TGG | + | chr7_4:8103746-8103765 | Msa1138560:CDS | 50.0% | |
| TGAGAGGAACTCGAGCACAA+TGG | + | chr7_4:8103784-8103803 | Msa1138560:CDS | 50.0% | |
| AGGACTCAACGCAAACTGGT+CGG | + | chr7_4:8103885-8103904 | Msa1138560:CDS | 50.0% | |
| TGGTGTCCCTGAGGAATAGA+AGG | + | chr7_4:8103987-8104006 | Msa1138560:CDS | 50.0% | |
| GGTGTCCCTGAGGAATAGAA+GGG | + | chr7_4:8103988-8104007 | Msa1138560:CDS | 50.0% | |
| CGCTAGAACCAACAACTCCT+AGG | + | chr7_4:8104053-8104072 | Msa1138560:CDS | 50.0% | |
| ! | TTTGCATCAGGTTGCCTCCT+AGG | - | chr7_4:8104073-8104092 | None:intergenic | 50.0% |
| CGAGTTCAAGAAGTCCGGAA+AGG | + | chr7_4:8104201-8104220 | Msa1138560:CDS | 50.0% | |
| CTCAACCATGACAAAAGCCG+AGG | - | chr7_4:8104362-8104381 | None:intergenic | 50.0% | |
| GAGCCGTCGAATACTATCCA+AGG | + | chr7_4:8104379-8104398 | Msa1138560:CDS | 50.0% | |
| AACAGAAACTTGGCCACCCA+AGG | + | chr7_4:8104943-8104962 | Msa1138560:CDS | 50.0% | |
| GATCGCCACCGTTTCATCAC+AGG | + | chr7_4:8101129-8101148 | Msa1138560:CDS | 55.0% | |
| TGTGTTTACGTCTGCAGGGC+CGG | + | chr7_4:8101320-8101339 | Msa1138560:intron | 55.0% | |
| CGGTCGAAGTTGCTCAAGGT+CGG | - | chr7_4:8101731-8101750 | None:intergenic | 55.0% | |
| GCCTTGGAGAATCTACGCGT+TGG | - | chr7_4:8103553-8103572 | None:intergenic | 55.0% | |
| GGAGCTTCCTAGGCTTTCCT+TGG | + | chr7_4:8103682-8103701 | Msa1138560:CDS | 55.0% | |
| TCCATTCGAGGGATTGACGG+AGG | + | chr7_4:8103719-8103738 | Msa1138560:CDS | 55.0% | |
| TCCTCCGTCAATCCCTCGAA+TGG | - | chr7_4:8103723-8103742 | None:intergenic | 55.0% | |
| GATGGGACTAGAAGCTCTCC+AGG | + | chr7_4:8103865-8103884 | Msa1138560:CDS | 55.0% | |
| CTCCAGGACTCAACGCAAAC+TGG | + | chr7_4:8103881-8103900 | Msa1138560:CDS | 55.0% | |
| GACCAGTTTGCGTTGAGTCC+TGG | - | chr7_4:8103886-8103905 | None:intergenic | 55.0% | |
| GGTTGCCTCCTAGGAGTTGT+TGG | - | chr7_4:8104064-8104083 | None:intergenic | 55.0% | |
| ! | CTTGCCCTCGGCTTTTGTCA+TGG | + | chr7_4:8104354-8104373 | Msa1138560:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 8100376 | 8105424 | 8100376 | ID=Msa1138560;Name=Msa1138560 |
| chr7_4 | mRNA | 8100376 | 8105424 | 8100376 | ID=Msa1138560-mRNA-1;Parent=Msa1138560;Name=Msa1138560-mRNA-1;_AED=0.02;_eAED=0.02;_QI=189|1|0.6|1|0.75|0.6|5|84|734 |
| chr7_4 | exon | 8100376 | 8100512 | 8100376 | ID=Msa1138560-mRNA-1:exon:2219;Parent=Msa1138560-mRNA-1 |
| chr7_4 | exon | 8100987 | 8101192 | 8100987 | ID=Msa1138560-mRNA-1:exon:2220;Parent=Msa1138560-mRNA-1 |
| chr7_4 | exon | 8103128 | 8103180 | 8103128 | ID=Msa1138560-mRNA-1:exon:2221;Parent=Msa1138560-mRNA-1 |
| chr7_4 | exon | 8103260 | 8105014 | 8103260 | ID=Msa1138560-mRNA-1:exon:2222;Parent=Msa1138560-mRNA-1 |
| chr7_4 | exon | 8105098 | 8105424 | 8105098 | ID=Msa1138560-mRNA-1:exon:2223;Parent=Msa1138560-mRNA-1 |
| chr7_4 | five_prime_UTR | 8100376 | 8100512 | 8100376 | ID=Msa1138560-mRNA-1:five_prime_utr;Parent=Msa1138560-mRNA-1 |
| chr7_4 | five_prime_UTR | 8100987 | 8101038 | 8100987 | ID=Msa1138560-mRNA-1:five_prime_utr;Parent=Msa1138560-mRNA-1 |
| chr7_4 | CDS | 8101039 | 8101192 | 8101039 | ID=Msa1138560-mRNA-1:cds;Parent=Msa1138560-mRNA-1 |
| chr7_4 | CDS | 8103128 | 8103180 | 8103128 | ID=Msa1138560-mRNA-1:cds;Parent=Msa1138560-mRNA-1 |
| chr7_4 | CDS | 8103260 | 8105014 | 8103260 | ID=Msa1138560-mRNA-1:cds;Parent=Msa1138560-mRNA-1 |
| chr7_4 | CDS | 8105098 | 8105340 | 8105098 | ID=Msa1138560-mRNA-1:cds;Parent=Msa1138560-mRNA-1 |
| chr7_4 | three_prime_UTR | 8105341 | 8105424 | 8105341 | ID=Msa1138560-mRNA-1:three_prime_utr;Parent=Msa1138560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
