AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1144410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144410 MtrunA17_Chr4g0036021 97.885 520 11 0 1 520 1 520 0.0 1019
Msa1144410 MtrunA17_Chr4g0034681 76.054 522 118 3 1 515 1 522 0.0 797
Msa1144410 MtrunA17_Chr3g0144361 76.056 497 115 2 1 493 1 497 0.0 757
Msa1144410 MtrunA17_Chr8g0373531 60.600 467 181 2 24 487 16 482 0.0 564
Msa1144410 MtrunA17_Chr5g0432581 56.250 480 207 2 22 498 14 493 0.0 556
Msa1144410 MtrunA17_Chr6g0485661 53.319 467 210 1 13 479 44 502 9.97e-179 512
Msa1144410 MtrunA17_Chr2g0282031 51.016 492 228 4 19 510 45 523 6.42e-167 483
Msa1144410 MtrunA17_Chr4g0021771 46.667 510 251 5 10 519 42 530 7.08e-160 465
Msa1144410 MtrunA17_Chr5g0403831 48.401 469 238 2 24 488 28 496 9.42e-159 461
Msa1144410 MtrunA17_Chr8g0390521 50.216 464 224 2 24 487 15 471 1.51e-158 460
Msa1144410 MtrunA17_Chr1g0213611 32.857 490 297 9 14 493 63 530 1.89e-76 250
Msa1144410 MtrunA17_Chr7g0214451 33.750 480 288 8 14 484 18 476 2.09e-74 244
Msa1144410 MtrunA17_Chr1g0213631 34.157 445 268 8 46 484 4 429 1.41e-70 233
Msa1144410 MtrunA17_Chr4g0039651 31.463 499 299 11 10 484 18 497 5.91e-67 224
Msa1144410 MtrunA17_Chr7g0250881 32.371 485 286 12 10 484 47 499 9.09e-65 218
Msa1144410 MtrunA17_Chr6g0457781 33.188 458 271 10 33 484 111 539 4.86e-63 215
Msa1144410 MtrunA17_Chr3g0115781 30.658 486 291 11 31 491 29 493 9.40e-63 213
Msa1144410 MtrunA17_Chr4g0032021 31.753 485 287 12 23 484 88 551 9.10e-61 209
Msa1144410 MtrunA17_Chr2g0303731 35.244 349 211 6 23 368 22 358 2.07e-58 203
Msa1144410 MtrunA17_Chr2g0303731 35.870 92 59 0 394 485 460 551 8.30e-11 64.7
Msa1144410 MtrunA17_Chr5g0420841 30.492 528 312 14 16 513 9 511 4.16e-58 201
Msa1144410 MtrunA17_Chr3g0115721 29.424 486 297 10 31 491 27 491 4.53e-57 198
Msa1144410 MtrunA17_Chr5g0394341 29.079 478 294 8 31 483 26 483 7.20e-57 198
Msa1144410 MtrunA17_Chr3g0115741 29.508 488 294 11 31 493 30 492 8.87e-57 197
Msa1144410 MtrunA17_Chr8g0376601 35.328 351 210 5 22 368 21 358 3.88e-55 194
Msa1144410 MtrunA17_Chr8g0390141 30.346 491 294 12 26 491 26 493 7.98e-55 192
Msa1144410 MtrunA17_Chr3g0115711 30.185 487 291 11 31 491 27 490 9.12e-55 192
Msa1144410 MtrunA17_Chr1g0205681 28.016 489 308 9 31 493 27 497 1.29e-54 191
Msa1144410 MtrunA17_Chr2g0303701 33.616 354 211 6 23 370 22 357 1.40e-52 187
Msa1144410 MtrunA17_Chr8g0390261 28.310 491 302 12 26 491 28 493 2.99e-52 185
Msa1144410 MtrunA17_Chr3g0115751 28.512 484 304 10 31 491 32 496 3.94e-52 185
Msa1144410 MtrunA17_Chr8g0373181 27.332 461 307 6 30 487 50 485 5.61e-52 184
Msa1144410 MtrunA17_Chr4g0065311 28.247 485 304 10 29 493 24 484 6.32e-52 184
Msa1144410 MtrunA17_Chr8g0376631 33.333 336 205 5 23 353 22 343 1.07e-51 185
Msa1144410 MtrunA17_Chr8g0376631 36.000 100 64 0 386 485 451 550 1.22e-11 67.0
Msa1144410 MtrunA17_Chr1g0205671 27.368 475 305 8 31 483 27 483 1.63e-51 183
Msa1144410 MtrunA17_Chr1g0164871 29.243 489 294 11 31 491 27 491 3.20e-51 182
Msa1144410 MtrunA17_Chr1g0164851 29.448 489 293 11 31 491 27 491 3.64e-51 182
Msa1144410 MtrunA17_Chr6g0486681 27.902 491 304 13 26 491 28 493 8.23e-51 181
Msa1144410 MtrunA17_Chr6g0486671 27.902 491 304 13 26 491 28 493 8.23e-51 181
Msa1144410 MtrunA17_Chr2g0290181 30.691 391 257 5 1 387 1 381 8.70e-51 182
Msa1144410 MtrunA17_Chr2g0290181 40.659 91 54 0 394 484 463 553 2.94e-14 75.5
Msa1144410 MtrunA17_Chr3g0085971 30.569 422 261 8 79 493 94 490 1.47e-50 181
Msa1144410 MtrunA17_Chr4g0065324 28.512 477 297 11 29 483 32 486 1.33e-49 178
Msa1144410 MtrunA17_Chr1g0205691 28.571 476 295 8 33 483 28 483 2.35e-49 177
Msa1144410 MtrunA17_Chr7g0273281 28.166 458 302 6 32 489 67 497 3.05e-49 177
Msa1144410 MtrunA17_Chr5g0445601 26.706 513 333 9 1 493 1 490 3.73e-49 176
Msa1144410 MtrunA17_Chr1g0155221 27.197 478 318 8 15 487 36 488 4.32e-49 176
Msa1144410 MtrunA17_Chr3g0078971 26.186 485 314 10 31 493 27 489 4.47e-49 176
Msa1144410 MtrunA17_Chr3g0078991 28.056 499 315 13 18 491 13 492 1.16e-48 175
Msa1144410 MtrunA17_Chr4g0048051 28.571 490 294 12 26 484 22 486 2.86e-48 174
Msa1144410 MtrunA17_Chr2g0286721 28.352 455 284 8 38 484 60 480 4.22e-48 173
Msa1144410 MtrunA17_Chr4g0048411 27.254 488 303 10 26 484 22 486 8.11e-48 173
Msa1144410 MtrunA17_Chr4g0066581 28.509 456 292 8 38 489 63 488 9.33e-48 172
Msa1144410 MtrunA17_Chr5g0437021 29.423 503 305 13 16 491 12 491 1.07e-47 172
Msa1144410 MtrunA17_Chr7g0257631 27.290 513 330 10 1 493 35 524 3.65e-47 172
Msa1144410 MtrunA17_Chr5g0417611 27.112 509 307 13 17 493 16 492 5.34e-47 171
Msa1144410 MtrunA17_Chr3g0119401 28.970 466 294 11 32 489 98 534 2.30e-46 169
Msa1144410 MtrunA17_Chr8g0373191 27.312 465 282 10 30 487 42 457 7.51e-46 166
Msa1144410 MtrunA17_Chr3g0128171 29.323 399 254 8 92 483 61 438 4.52e-45 164
Msa1144410 MtrunA17_Chr6g0486021 29.839 496 301 13 1 484 23 483 5.08e-45 165
Msa1144410 MtrunA17_Chr7g0259471 28.222 450 284 10 43 484 52 470 1.60e-44 163
Msa1144410 MtrunA17_Chr3g0128081 25.657 495 313 10 31 493 26 497 8.51e-44 162
Msa1144410 MtrunA17_Chr8g0376611 32.500 280 177 3 79 358 14 281 1.48e-43 161
Msa1144410 MtrunA17_Chr8g0376611 37.363 91 57 0 394 484 390 480 2.61e-11 65.9
Msa1144410 MtrunA17_Chr4g0004821 29.412 459 288 8 32 484 41 469 2.56e-42 157
Msa1144410 MtrunA17_Chr3g0115731 27.699 491 278 11 31 491 27 470 6.76e-42 156
Msa1144410 MtrunA17_Chr3g0121674 32.686 309 184 6 188 493 1 288 8.01e-42 152
Msa1144410 MtrunA17_Chr3g0078791 27.563 439 261 8 75 502 39 431 1.05e-41 155
Msa1144410 MtrunA17_Chr7g0259221 28.935 432 280 9 55 486 70 474 1.19e-40 152
Msa1144410 MtrunA17_Chr3g0144261 36.019 211 133 2 25 234 2 211 1.48e-35 141
Msa1144410 MtrunA17_Chr3g0144261 29.804 255 161 7 257 501 484 730 5.87e-24 105
Msa1144410 MtrunA17_Chr2g0290161 31.511 311 170 7 85 394 21 289 3.98e-35 137
Msa1144410 MtrunA17_Chr4g0065351 29.143 350 224 8 145 493 1 327 4.86e-32 126
Msa1144410 MtrunA17_Chr3g0146061 38.647 207 113 6 38 236 15 215 2.20e-31 129
Msa1144410 MtrunA17_Chr3g0146061 30.973 226 136 5 269 483 507 723 3.01e-25 110
Msa1144410 MtrunA17_Chr5g0407441 35.784 204 123 5 31 229 8 208 7.75e-31 127
Msa1144410 MtrunA17_Chr5g0407441 30.165 242 144 5 256 483 475 705 4.19e-20 94.0
Msa1144410 MtrunA17_Chr8g0370141 35.294 204 124 5 31 229 8 208 2.64e-29 119
Msa1144410 MtrunA17_Chr5g0419321 32.609 184 120 4 49 229 54 236 8.34e-25 108
Msa1144410 MtrunA17_Chr5g0419321 31.120 241 149 4 258 488 503 736 2.26e-20 95.1
Msa1144410 MtrunA17_Chr5g0404191 29.688 192 127 2 30 221 53 236 1.95e-23 100
Msa1144410 MtrunA17_Chr5g0434231 33.333 156 78 1 79 234 17 146 3.53e-23 95.9
Msa1144410 MtrunA17_Chr8g0370151 29.075 227 145 3 266 483 125 344 4.51e-22 97.8
Msa1144410 MtrunA17_Chr7g0273261 30.151 199 131 3 288 486 46 236 1.10e-20 91.7
Msa1144410 MtrunA17_Chr7g0273271 26.705 176 122 1 38 213 38 206 2.30e-15 75.1
Msa1144410 MtrunA17_Chr1g0183921 23.355 471 257 17 80 486 84 514 4.37e-14 74.7
Msa1144410 MtrunA17_Chr1g0186831 24.670 454 253 19 80 480 83 500 2.74e-13 72.4
Msa1144410 MtrunA17_Chr4g0042131 24.010 404 266 16 83 482 43 409 9.38e-13 70.1
Msa1144410 MtrunA17_Chr5g0404181 36.275 102 64 1 386 487 31 131 1.37e-12 65.1
Msa1144410 MtrunA17_Chr5g0434251 37.363 91 57 0 394 484 46 136 2.05e-12 65.1
Msa1144410 MtrunA17_Chr4g0043571 22.078 462 272 15 77 484 78 505 2.63e-12 69.3
Msa1144410 MtrunA17_Chr4g0000061 23.721 430 280 13 79 482 81 488 1.20e-11 67.0
Msa1144410 MtrunA17_Chr3g0115771 25.225 333 186 12 137 469 7 276 1.20e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144410 AT3G18830.1 67.387 509 159 3 13 514 22 530 0.0 702
Msa1144410 AT2G16130.1 64.609 486 169 2 20 502 19 504 0.0 640
Msa1144410 AT2G16120.1 63.711 485 173 2 20 501 19 503 0.0 632
Msa1144410 AT4G36670.1 58.051 472 196 1 18 487 8 479 0.0 565
Msa1144410 AT2G18480.1 58.910 477 187 4 16 487 11 483 0.0 539
Msa1144410 AT2G20780.1 47.485 497 235 5 19 514 47 518 4.23e-158 461
Msa1144410 AT2G20780.2 47.609 460 215 5 56 514 26 460 4.34e-143 420
Msa1144410 AT2G43330.1 32.470 502 312 8 14 503 16 502 6.02e-70 233
Msa1144410 AT5G16150.2 32.675 456 276 8 33 484 111 539 2.87e-62 213
Msa1144410 AT5G16150.1 32.675 456 276 8 33 484 111 539 2.87e-62 213
Msa1144410 AT5G16150.3 32.675 456 276 8 33 484 111 539 2.87e-62 213
Msa1144410 AT5G59250.1 29.854 479 282 11 32 484 103 553 1.54e-59 206
Msa1144410 AT5G17010.1 30.754 504 296 15 10 484 20 499 6.78e-59 203
Msa1144410 AT5G17010.3 30.754 504 296 15 10 484 20 499 6.78e-59 203
Msa1144410 AT5G17010.4 30.754 504 296 15 10 484 20 499 6.78e-59 203
Msa1144410 AT1G50310.1 29.209 493 300 12 26 493 24 492 8.22e-59 203
Msa1144410 AT3G03090.1 31.197 468 287 9 32 484 52 499 7.98e-58 200
Msa1144410 AT5G26340.1 29.363 487 298 11 31 493 27 491 2.34e-57 199
Msa1144410 AT3G19940.1 29.615 493 297 12 26 493 24 491 5.19e-56 196
Msa1144410 AT5G26250.1 28.776 490 301 10 30 493 25 492 2.72e-54 191
Msa1144410 AT3G05960.1 28.687 495 304 9 17 486 11 481 4.50e-54 190
Msa1144410 AT3G05150.2 28.513 491 303 9 17 495 21 475 1.95e-53 188
Msa1144410 AT3G05150.1 28.542 480 297 8 17 484 21 466 2.76e-53 187
Msa1144410 AT3G05150.3 28.542 480 297 8 17 484 21 466 2.76e-53 187
Msa1144410 AT5G27360.1 27.733 494 318 11 10 495 11 473 1.06e-52 186
Msa1144410 AT5G27350.1 28.340 494 313 11 1 486 3 463 1.23e-52 186
Msa1144410 AT1G11260.1 27.621 496 311 11 22 492 18 490 1.37e-52 187
Msa1144410 AT1G54730.2 30.022 453 286 7 38 488 43 466 1.50e-52 185
Msa1144410 AT5G27360.3 27.586 493 318 11 10 494 59 520 3.00e-52 186
Msa1144410 AT1G30220.1 33.913 345 211 4 23 363 24 355 3.57e-52 187
Msa1144410 AT1G30220.1 38.462 91 56 0 394 484 463 553 8.06e-13 71.2
Msa1144410 AT1G75220.1 28.139 462 304 7 29 487 50 486 6.24e-52 184
Msa1144410 AT1G34580.1 28.893 488 300 11 31 491 28 495 6.80e-52 184
Msa1144410 AT5G23270.1 29.109 505 310 13 16 495 13 494 1.42e-51 184
Msa1144410 AT1G34580.2 30.238 420 267 8 79 491 45 445 1.54e-51 182
Msa1144410 AT3G19930.1 27.969 522 314 14 1 491 1 491 1.74e-51 183
Msa1144410 AT3G19930.2 27.969 522 314 14 1 491 1 491 1.74e-51 183
Msa1144410 AT5G18840.1 27.846 492 310 9 8 484 14 475 1.91e-51 182
Msa1144410 AT4G02050.2 27.778 504 323 10 18 499 18 502 1.86e-50 181
Msa1144410 AT4G02050.1 27.778 504 323 10 18 499 18 502 1.86e-50 181
Msa1144410 AT1G19450.1 28.448 464 300 7 29 487 51 487 9.23e-50 178
Msa1144410 AT1G05030.1 30.283 459 284 8 33 484 85 514 1.42e-48 176
Msa1144410 AT3G05165.3 27.536 483 316 12 10 486 8 462 5.16e-48 173
Msa1144410 AT3G05165.2 27.536 483 316 12 10 486 8 462 5.16e-48 173
Msa1144410 AT3G05165.1 27.536 483 316 12 10 486 8 462 5.16e-48 173
Msa1144410 AT4G04750.1 27.231 437 289 8 55 489 64 473 6.54e-48 173
Msa1144410 AT4G04750.2 27.231 437 289 8 55 489 64 473 6.54e-48 173
Msa1144410 AT4G04750.3 27.231 437 289 8 55 489 108 517 1.13e-47 173
Msa1144410 AT1G77210.2 27.495 491 306 13 26 493 28 491 2.01e-47 172
Msa1144410 AT1G77210.1 27.495 491 306 13 26 493 28 491 2.01e-47 172
Msa1144410 AT4G04760.1 27.957 465 297 9 32 489 36 469 2.76e-47 171
Msa1144410 AT3G05160.1 27.061 473 314 8 18 486 8 453 3.00e-47 171
Msa1144410 AT1G08930.1 26.667 480 314 11 19 489 43 493 1.20e-46 170
Msa1144410 AT1G08930.2 26.667 480 314 11 19 489 43 493 1.20e-46 170
Msa1144410 AT2G48020.2 27.564 468 308 8 19 484 20 458 2.72e-46 168
Msa1144410 AT2G48020.1 27.564 468 308 8 19 484 20 458 2.72e-46 168
Msa1144410 AT4G04760.3 28.182 440 278 9 57 489 2 410 3.16e-46 167
Msa1144410 AT1G50310.2 31.593 364 220 10 135 493 10 349 7.82e-46 165
Msa1144410 AT2G35740.1 31.487 343 217 6 31 367 30 360 1.45e-45 169
Msa1144410 AT2G35740.1 40.659 91 54 0 394 484 466 556 1.20e-13 73.9
Msa1144410 AT1G07340.1 28.926 484 286 12 30 483 26 481 5.48e-45 165
Msa1144410 AT1G08890.1 27.292 480 313 10 18 490 13 463 7.98e-45 164
Msa1144410 AT4G21480.1 27.539 512 312 15 16 495 11 495 9.61e-45 165
Msa1144410 AT1G54730.5 28.160 451 276 8 38 488 43 445 1.50e-44 163
Msa1144410 AT1G54730.3 29.064 406 258 6 38 441 43 420 7.33e-44 161
Msa1144410 AT4G16480.2 30.499 341 223 5 31 367 31 361 1.41e-43 163
Msa1144410 AT4G16480.2 40.659 91 54 0 394 484 467 557 1.43e-14 77.0
Msa1144410 AT4G16480.3 30.499 341 223 5 31 367 31 361 1.41e-43 163
Msa1144410 AT4G16480.3 40.659 91 54 0 394 484 467 557 1.43e-14 77.0
Msa1144410 AT4G16480.1 30.499 341 223 5 31 367 31 361 1.41e-43 163
Msa1144410 AT4G16480.1 40.659 91 54 0 394 484 467 557 1.43e-14 77.0
Msa1144410 AT1G05030.2 29.438 445 278 8 47 484 47 462 3.19e-43 160
Msa1144410 AT1G67300.2 29.221 462 288 11 32 484 56 487 3.54e-43 160
Msa1144410 AT3G05160.3 27.674 430 284 7 57 486 2 404 3.83e-43 158
Msa1144410 AT3G05160.2 27.674 430 284 7 57 486 2 404 3.83e-43 158
Msa1144410 AT1G79820.2 29.935 461 283 13 32 484 59 487 5.06e-43 160
Msa1144410 AT1G79820.1 29.935 461 283 13 32 484 59 487 5.06e-43 160
Msa1144410 AT3G05155.1 25.207 484 330 10 3 484 2 455 6.60e-43 159
Msa1144410 AT1G08900.3 28.054 442 289 9 50 490 40 453 5.82e-42 156
Msa1144410 AT5G61520.1 27.579 504 304 17 22 493 19 493 1.55e-41 156
Msa1144410 AT3G05400.1 27.473 455 299 9 38 490 37 462 1.62e-41 155
Msa1144410 AT1G08900.1 27.753 454 299 9 38 490 36 461 1.98e-41 155
Msa1144410 AT1G08900.2 27.753 454 299 9 38 490 36 461 1.98e-41 155
Msa1144410 AT1G08900.5 27.918 437 286 9 55 490 11 419 2.42e-41 154
Msa1144410 AT1G67300.1 28.942 463 287 12 32 484 56 486 7.55e-41 154
Msa1144410 AT1G67300.3 28.942 463 287 12 32 484 56 486 7.55e-41 154
Msa1144410 AT5G27360.2 27.387 398 257 9 99 495 3 369 5.26e-40 149
Msa1144410 AT5G27360.5 27.387 398 257 9 99 495 3 369 5.26e-40 149
Msa1144410 AT4G04760.2 26.882 465 299 10 32 489 36 466 6.93e-40 151
Msa1144410 AT5G61520.2 27.446 419 274 11 79 493 53 445 3.60e-39 149
Msa1144410 AT3G05165.4 27.700 426 272 12 10 429 8 403 3.42e-38 146
Msa1144410 AT3G05165.5 27.700 426 272 12 10 429 8 403 3.42e-38 146
Msa1144410 AT5G27360.4 25.952 420 276 9 10 421 11 403 3.95e-38 145
Msa1144410 AT3G05165.6 26.712 438 288 10 10 441 8 418 7.18e-38 146
Msa1144410 AT1G54730.9 28.042 378 242 6 38 413 43 392 1.29e-37 143
Msa1144410 AT1G54730.7 28.042 378 242 6 38 413 43 392 1.29e-37 143
Msa1144410 AT1G67300.6 29.126 412 250 12 32 433 56 435 2.59e-37 143
Msa1144410 AT1G67300.7 29.126 412 250 12 32 433 56 435 2.59e-37 143
Msa1144410 AT1G79820.4 29.730 407 252 11 32 433 59 436 3.74e-37 143
Msa1144410 AT3G05400.2 29.144 374 234 9 119 490 98 442 8.14e-37 142
Msa1144410 AT1G67300.4 29.032 403 244 12 32 424 56 426 1.13e-36 141
Msa1144410 AT1G67300.5 29.032 403 244 12 32 424 56 426 1.13e-36 141
Msa1144410 AT1G54730.4 26.980 404 248 7 38 441 43 399 4.06e-36 139
Msa1144410 AT1G20840.2 38.426 216 121 5 25 234 2 211 4.86e-36 143
Msa1144410 AT1G20840.2 29.502 261 158 6 257 503 486 734 4.72e-19 91.3
Msa1144410 AT1G20840.1 38.426 216 121 5 25 234 2 211 4.86e-36 143
Msa1144410 AT1G20840.1 29.502 261 158 6 257 503 486 734 4.72e-19 91.3
Msa1144410 AT5G17010.2 25.904 498 268 14 10 484 17 436 1.06e-35 139
Msa1144410 AT3G51490.1 36.404 228 134 6 31 252 8 230 1.25e-35 142
Msa1144410 AT3G51490.1 30.802 237 146 5 269 499 500 724 8.23e-21 96.7
Msa1144410 AT3G51490.2 36.404 228 134 6 31 252 8 230 1.31e-35 141
Msa1144410 AT3G51490.2 31.535 241 147 4 269 499 500 732 1.20e-24 108
Msa1144410 AT4G35300.9 35.743 249 135 8 38 266 15 258 7.28e-35 139
Msa1144410 AT4G35300.9 32.218 239 146 4 268 497 495 726 1.83e-23 105
Msa1144410 AT4G35300.2 35.743 249 135 8 38 266 15 258 7.28e-35 139
Msa1144410 AT4G35300.2 32.218 239 146 4 268 497 495 726 1.83e-23 105
Msa1144410 AT4G35300.3 35.743 249 135 8 38 266 15 258 7.28e-35 139
Msa1144410 AT4G35300.3 32.218 239 146 4 268 497 495 726 1.83e-23 105
Msa1144410 AT4G35300.4 35.743 249 135 8 38 266 15 258 8.41e-35 139
Msa1144410 AT4G35300.4 31.950 241 148 4 268 499 505 738 2.16e-23 104
Msa1144410 AT4G35300.8 35.743 249 135 8 38 266 15 258 8.41e-35 139
Msa1144410 AT4G35300.8 31.950 241 148 4 268 499 505 738 2.16e-23 104
Msa1144410 AT4G35300.6 35.743 249 135 8 38 266 15 258 8.41e-35 139
Msa1144410 AT4G35300.6 31.950 241 148 4 268 499 505 738 2.16e-23 104
Msa1144410 AT4G35300.11 35.743 249 135 8 38 266 15 258 8.41e-35 139
Msa1144410 AT4G35300.11 31.950 241 148 4 268 499 505 738 2.16e-23 104
Msa1144410 AT4G35300.1 35.743 249 135 8 38 266 15 258 8.41e-35 139
Msa1144410 AT4G35300.1 31.950 241 148 4 268 499 505 738 2.16e-23 104
Msa1144410 AT4G35300.10 35.743 249 135 8 38 266 15 258 8.41e-35 139
Msa1144410 AT4G35300.10 31.950 241 148 4 268 499 505 738 2.16e-23 104
Msa1144410 AT4G35300.7 35.743 249 135 8 38 266 15 258 8.41e-35 139
Msa1144410 AT4G35300.7 31.950 241 148 4 268 499 505 738 2.16e-23 104
Msa1144410 AT1G77210.3 26.331 357 238 8 139 493 9 342 5.01e-34 132
Msa1144410 AT3G20460.1 25.336 446 304 9 42 486 68 485 6.23e-31 125
Msa1144410 AT1G08920.1 25.383 457 298 11 38 486 43 464 1.07e-30 125
Msa1144410 AT1G08900.4 26.667 405 269 8 38 441 36 413 3.37e-30 123
Msa1144410 AT1G54730.11 27.215 316 205 4 38 353 43 333 3.97e-30 120
Msa1144410 AT1G54730.8 25.798 376 232 7 38 413 43 371 4.68e-30 122
Msa1144410 AT3G51490.3 38.235 170 102 3 84 252 13 180 5.22e-30 124
Msa1144410 AT3G51490.3 31.535 241 147 4 269 499 450 682 1.17e-24 108
Msa1144410 AT2G48020.4 26.496 351 233 5 20 370 21 346 7.26e-29 118
Msa1144410 AT1G08920.2 25.000 464 298 12 38 486 43 471 4.15e-28 117
Msa1144410 AT1G54730.10 26.871 294 193 4 38 330 43 315 1.42e-26 110
Msa1144410 AT1G54730.6 26.871 294 193 4 38 330 43 315 1.42e-26 110
Msa1144410 AT2G48020.3 25.595 336 225 5 20 355 21 331 7.30e-26 109
Msa1144410 AT3G05155.2 24.646 353 235 9 3 353 2 325 1.82e-24 104
Msa1144410 AT4G35300.5 31.950 241 148 4 268 499 308 541 1.69e-23 104
Msa1144410 AT1G08920.3 25.750 400 252 11 38 429 43 405 7.36e-23 101
Msa1144410 AT5G43340.1 24.236 458 260 16 79 486 84 504 4.63e-18 87.4
Msa1144410 AT1G79820.3 30.049 203 132 4 32 229 59 256 6.39e-18 86.7
Msa1144410 AT1G79820.3 34.667 150 88 3 338 484 297 439 2.92e-13 72.4
Msa1144410 AT1G79820.5 34.667 150 88 3 338 484 235 377 3.01e-13 72.0
Msa1144410 AT1G73220.1 28.455 369 195 17 77 425 147 466 5.41e-12 68.6
Msa1144410 AT3G13050.2 25.287 435 272 12 79 482 75 487 1.81e-11 67.0
Msa1144410 AT3G13050.4 25.287 435 272 12 79 482 75 487 1.81e-11 67.0
Msa1144410 AT3G13050.1 25.287 435 272 12 79 482 75 487 1.81e-11 67.0
Msa1144410 AT3G13050.3 25.287 435 272 12 79 482 75 487 1.81e-11 67.0
Msa1144410 AT2G38940.1 21.987 473 262 18 80 485 84 516 5.82e-11 65.5

Find 147 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAATCTCTTGAGGATTT+TGG 0.103175 7_4:+20400525 Msa1144410:CDS
GAACTATAAACCCACGTAAT+TGG 0.211453 7_4:-20402342 None:intergenic
CCCAGCCTTCTCAAAGATTC+TGG 0.218841 7_4:-20402052 None:intergenic
TCAGCTGTGGCACTGGCTTT+TGG 0.229121 7_4:-20402612 None:intergenic
ACAAGCAAACTTGTTCCTTT+TGG 0.235091 7_4:-20400562 None:intergenic
TCTTGTCATTGGTGCTTAAC+TGG 0.242911 7_4:-20402653 None:intergenic
CTTCGTTGGAGCTGTACTTA+TGG 0.250654 7_4:+20401172 Msa1144410:CDS
CCCATAGGTTCTTACATTGC+AGG 0.273558 7_4:+20401092 Msa1144410:CDS
ATGTTTGGTCGTTTCTTTGC+TGG 0.276505 7_4:+20401221 Msa1144410:CDS
TTTGTACGTCCGTTACTTTA+AGG 0.277132 7_4:-20401034 None:intergenic
CCCTGTTATCTCTTTAATAT+CGG 0.279960 7_4:-20401854 None:intergenic
TTCGTTGGAGCTGTACTTAT+GGG 0.286828 7_4:+20401173 Msa1144410:CDS
TGCTTGTGCTTGTGCTATCT+TGG 0.301856 7_4:+20400578 Msa1144410:CDS
GTAGGATACATTTCAAACTA+TGG 0.303555 7_4:+20401634 Msa1144410:CDS
GCCGATATTAAAGAGATAAC+AGG 0.332161 7_4:+20401853 Msa1144410:CDS
CTATTGGTGCGGTGGTGAAT+AGG 0.339102 7_4:+20402403 Msa1144410:CDS
CTCGTTGCCAAGGGTCGATT+AGG 0.345950 7_4:+20401769 Msa1144410:CDS
ACTTCCATCCTACTTGGATA+TGG 0.364246 7_4:+20400609 Msa1144410:CDS
CGAGCTCAAGGCGTGTCTAT+TGG 0.367306 7_4:+20402387 Msa1144410:CDS
AACATGAGAAATGCGTAGTT+TGG 0.369762 7_4:-20401203 None:intergenic
AAGGGTCCTTTGGTAATCTA+TGG 0.369891 7_4:+20402583 Msa1144410:CDS
CCCTGCAATGTAAGAACCTA+TGG 0.375747 7_4:-20401093 None:intergenic
CACTCCTTCAGCTGTGGCAC+TGG 0.380110 7_4:-20402619 None:intergenic
AACTACGCATTTCTCATGTT+TGG 0.380920 7_4:+20401206 Msa1144410:CDS
GAAAACAGTGTTCGTCTTAG+TGG 0.383926 7_4:+20402125 Msa1144410:CDS
TTCTTTGCTGGTGTTGGCAT+AGG 0.388164 7_4:+20401233 Msa1144410:CDS
AAAACATTGGAGGAAATAGA+AGG 0.397984 7_4:+20402564 Msa1144410:CDS
CACATCTTTATTGCCTCCCT+CGG 0.408711 7_4:+20401976 Msa1144410:CDS
TCGTTGCCAAGGGTCGATTA+GGG 0.411244 7_4:+20401770 Msa1144410:CDS
CCCAGAATCTTTGAGAAGGC+TGG 0.421941 7_4:+20402051 Msa1144410:CDS
TATGCAGCTACTTTCTCAAT+AGG 0.423162 7_4:+20402312 Msa1144410:CDS
GTTTCAGTCACAAAAGTTCA+AGG 0.424464 7_4:+20401904 Msa1144410:CDS
CACTTCTTTGCACAAGCCAC+TGG 0.424604 7_4:+20402003 Msa1144410:CDS
CCAGCCTTCTCAAAGATTCT+GGG 0.429982 7_4:-20402051 None:intergenic
TCCAAGGCCATCACCATTGG+TGG 0.430139 7_4:+20402465 Msa1144410:CDS
GGCTTCCCCTAATCGACCCT+TGG 0.433452 7_4:-20401776 None:intergenic
TGGTGAATAGGGTCACGAGC+GGG 0.434591 7_4:+20402415 Msa1144410:CDS
TCTATGACTTCCATCCTACT+TGG 0.436140 7_4:+20400603 Msa1144410:CDS
CGTTACACGATTGTTCTTGC+CGG 0.436927 7_4:+20401140 Msa1144410:CDS
GGTCGTTTCTTTGCTGGTGT+TGG 0.442322 7_4:+20401227 Msa1144410:CDS
CCCACCAATGGTGATGGCCT+TGG 0.443102 7_4:-20402466 None:intergenic
GAGGAAATAGAAGGGTCCTT+TGG 0.444344 7_4:+20402573 Msa1144410:CDS
CCATGCCCGAGTCACCTAGA+TGG 0.454068 7_4:+20401746 Msa1144410:CDS
GAGACTTCAGATGTATAAAC+AGG 0.455110 7_4:-20401275 None:intergenic
TATTGGTGCGGTGGTGAATA+GGG 0.470445 7_4:+20402404 Msa1144410:CDS
ACCTAGATGGCTCGTTGCCA+AGG 0.471470 7_4:+20401759 Msa1144410:CDS
TGACTCGGGCATGGCTAATA+CGG 0.476323 7_4:-20401737 None:intergenic
CAATGGTGATGGCCTTGGAC+AGG 0.480083 7_4:-20402461 None:intergenic
TTCAGGTATTTCTGAATGGA+GGG 0.481942 7_4:+20401605 Msa1144410:intron
TCTTTGCTGGTGTTGGCATA+GGG 0.483026 7_4:+20401234 Msa1144410:CDS
CCAAGGCCATCACCATTGGT+GGG 0.484140 7_4:+20402466 Msa1144410:CDS
GGAAGCCACGAGATGAAGTA+GGG 0.490590 7_4:-20401298 None:intergenic
GTCCTCAAAAGAAGCCCAAA+AGG 0.492436 7_4:+20400547 Msa1144410:CDS
AAGAACCTATGGGAGAATAT+AGG 0.496870 7_4:-20401082 None:intergenic
CCCTTGGCAACGAGCCATCT+AGG 0.497077 7_4:-20401760 None:intergenic
CTTCTCGCAACTGTAGCTGT+TGG 0.497312 7_4:+20402096 Msa1144410:CDS
GCTACTTTCTCAATAGGATC+AGG 0.500947 7_4:+20402318 Msa1144410:CDS
CTGTCCAAGGCCATCACCAT+TGG 0.502182 7_4:+20402462 Msa1144410:CDS
CCGTTGAGGCTTCGAGCTCA+AGG 0.502797 7_4:+20402375 Msa1144410:CDS
AAAGTCGTCGTCGCAGTCCA+AGG 0.504548 7_4:-20401881 None:intergenic
AATAATCTCACTTCTGACAT+TGG 0.504708 7_4:+20402209 Msa1144410:CDS
ACATCTTTATTGCCTCCCTC+GGG 0.507173 7_4:+20401977 Msa1144410:CDS
TGCGAGAAGCTTATTTGTGT+CGG 0.508276 7_4:-20402082 None:intergenic
AGTTGTAAAAGTCTTGTCAT+TGG 0.509427 7_4:-20402664 None:intergenic
GGGAGACTTTCTGACTGGAT+TGG 0.511368 7_4:+20401113 Msa1144410:CDS
CGGGCATTGCAATTGTCGCA+TGG 0.513240 7_4:+20402505 Msa1144410:CDS
AGGAAGCCACGAGATGAAGT+AGG 0.516243 7_4:-20401299 None:intergenic
AAGTTCAAGGCAAAGGCGTA+TGG 0.516614 7_4:+20401917 Msa1144410:CDS
CCATAGGTTCTTACATTGCA+GGG 0.517766 7_4:+20401093 Msa1144410:CDS
TATGGTTGGCGAGTGATGCT+TGG 0.521262 7_4:+20401679 Msa1144410:CDS
CCAGAATCTTTGAGAAGGCT+GGG 0.523498 7_4:+20402052 Msa1144410:CDS
AACGAGCCATCTAGGTGACT+CGG 0.523691 7_4:-20401752 None:intergenic
TCCGTTCACTCCTTCAGCTG+TGG 0.524294 7_4:-20402625 None:intergenic
TGGCGAGTGATGCTTGGAAT+CGG 0.525279 7_4:+20401685 Msa1144410:CDS
TTGCAGGGAGACTTTCTGAC+TGG 0.530675 7_4:+20401108 Msa1144410:CDS
TTTCAGGTATTTCTGAATGG+AGG 0.531761 7_4:+20401604 Msa1144410:intron
TGGCTAATACGGCCATAGCT+AGG 0.533351 7_4:-20401726 None:intergenic
AATATCTGATTCTAAAGAAG+AGG 0.533914 7_4:+20401816 Msa1144410:CDS
GTACAAATTGAAGTTCTCCT+AGG 0.535054 7_4:+20401050 Msa1144410:CDS
ATTCAAACGCCACACTGACA+TGG 0.536095 7_4:+20402256 Msa1144410:CDS
AACAGTTCTGAAATCTCTTG+AGG 0.536753 7_4:+20400518 Msa1144410:CDS
TATTGAGAAAGTAGCTGCAT+AGG 0.541536 7_4:-20402310 None:intergenic
CCCTTCTGTAATCCTAGCTA+TGG 0.542279 7_4:+20401714 Msa1144410:CDS
AAAGCCAGTGCCACAGCTGA+AGG 0.545456 7_4:+20402615 Msa1144410:CDS
TGTACTTACCATATCCAAGT+AGG 0.548055 7_4:-20400617 None:intergenic
TCCAACGAAGAAAATCAAAC+CGG 0.549115 7_4:-20401159 None:intergenic
GAAAGCCCCACCAATGGTGA+TGG 0.550600 7_4:-20402472 None:intergenic
CAAGGCCATCACCATTGGTG+GGG 0.554135 7_4:+20402467 Msa1144410:CDS
TTGTTGTTAACCAGTGTAGG+TGG 0.554692 7_4:+20402183 Msa1144410:CDS
CTTCCTCACTTCCTTGCCTG+AGG 0.555174 7_4:+20401316 Msa1144410:CDS
ATAAAGATGTGACGAACTGC+AGG 0.563031 7_4:-20401964 None:intergenic
AAGTCGTCGTCGCAGTCCAA+GGG 0.563990 7_4:-20401880 None:intergenic
TTCAAACGCCACACTGACAT+GGG 0.567033 7_4:+20402257 Msa1144410:CDS
AGCTAGGATTACAGAAGGGA+TGG 0.568290 7_4:-20401710 None:intergenic
AATATAGGTTTATGATACCT+AGG 0.569110 7_4:-20401067 None:intergenic
GGTGAATAGGGTCACGAGCG+GGG 0.569964 7_4:+20402416 Msa1144410:CDS
GATTATTAACCCACCTACAC+TGG 0.571276 7_4:-20402193 None:intergenic
GTCACAAAAGTTCAAGGCAA+AGG 0.572137 7_4:+20401910 Msa1144410:CDS
CCTTGAGCTCGAAGCCTCAA+CGG 0.572753 7_4:-20402375 None:intergenic
AGAGATAACAGGGATCCCCT+TGG 0.572972 7_4:+20401864 Msa1144410:CDS
ATAAACCTATATTCTCCCAT+AGG 0.576460 7_4:+20401077 Msa1144410:CDS
CCTAGATGGCTCGTTGCCAA+GGG 0.580224 7_4:+20401760 Msa1144410:CDS
GTTCTGAAATATTTCCGTTG+AGG 0.582076 7_4:+20402361 Msa1144410:CDS
CTTACCATATCCAAGTAGGA+TGG 0.584589 7_4:-20400613 None:intergenic
CCATCTAGGTGACTCGGGCA+TGG 0.586844 7_4:-20401746 None:intergenic
TAGAAAACTTGCCTCAGGCA+AGG 0.589054 7_4:-20401327 None:intergenic
GCCATAGCTAGGATTACAGA+AGG 0.590270 7_4:-20401715 None:intergenic
CCTGCAATGTAAGAACCTAT+GGG 0.590311 7_4:-20401092 None:intergenic
AACACAAGGCAAAACATTGG+AGG 0.590671 7_4:+20402554 Msa1144410:CDS
TTTCCTCCATAGATTACCAA+AGG 0.590920 7_4:-20402589 None:intergenic
CACTCGCCAACCATAACGGA+GGG 0.592278 7_4:-20401671 None:intergenic
CTCGCCAACCATAACGGAGG+GGG 0.592645 7_4:-20401669 None:intergenic
TTGCCTCAGGCAAGGAAGTG+AGG 0.594555 7_4:-20401319 None:intergenic
GCATCACTCGCCAACCATAA+CGG 0.596064 7_4:-20401675 None:intergenic
TGAAACACAAGGCAAAACAT+TGG 0.596171 7_4:+20402551 Msa1144410:CDS
AATGGTGATGGCCTTGGACA+GGG 0.596717 7_4:-20402460 None:intergenic
GGACAGGGACAGAAAAGTCA+TGG 0.607404 7_4:-20402445 None:intergenic
ACGAGCCATCTAGGTGACTC+GGG 0.608653 7_4:-20401751 None:intergenic
GTCTCCCCTACTTCATCTCG+TGG 0.611163 7_4:+20401293 Msa1144410:CDS
TAGGATCAGGTCCAATTACG+TGG 0.612410 7_4:+20402331 Msa1144410:CDS
TGTTGTTAACCAGTGTAGGT+GGG 0.615220 7_4:+20402184 Msa1144410:CDS
GGTCCTTTGGTAATCTATGG+AGG 0.620543 7_4:+20402586 Msa1144410:CDS
AAGAAAGAAAGCCCCACCAA+TGG 0.624358 7_4:-20402478 None:intergenic
TAGTCCCAGAATCTTTGAGA+AGG 0.627740 7_4:+20402047 Msa1144410:CDS
GTGGTGAATAGGGTCACGAG+CGG 0.630839 7_4:+20402414 Msa1144410:CDS
GAAGCCACGAGATGAAGTAG+GGG 0.631896 7_4:-20401297 None:intergenic
CCGATATTAAAGAGATAACA+GGG 0.632385 7_4:+20401854 Msa1144410:CDS
ACAGATATTGGTGTGATGAG+TGG 0.633157 7_4:+20400987 Msa1144410:intron
GCCACAGCTGAAGGAGTGAA+CGG 0.634020 7_4:+20402624 Msa1144410:CDS
CGTTGCCAAGGGTCGATTAG+GGG 0.634337 7_4:+20401771 Msa1144410:CDS
TCAAGGCGTGTCTATTGGTG+CGG 0.635436 7_4:+20402392 Msa1144410:CDS
AAACATTGGAGGAAATAGAA+GGG 0.640963 7_4:+20402565 Msa1144410:CDS
GTGTTGTTGTTAACCAGTGT+AGG 0.645416 7_4:+20402180 Msa1144410:CDS
ATGTGACGAACTGCAGGTGT+AGG 0.646953 7_4:-20401958 None:intergenic
AGGCGTGTCTATTGGTGCGG+TGG 0.647052 7_4:+20402395 Msa1144410:CDS
AACAACAGCGTCTATGCCAG+TGG 0.658909 7_4:-20402019 None:intergenic
TGCAAAGAAGTGAATCCCGA+GGG 0.660277 7_4:-20401992 None:intergenic
AGGATCAGGTCCAATTACGT+GGG 0.664159 7_4:+20402332 Msa1144410:CDS
ATAAACAGGAGCAATCAAGA+AGG 0.665096 7_4:-20401261 None:intergenic
CGAAATAGCCCATGTCAGTG+TGG 0.673841 7_4:-20402265 None:intergenic
AGTCGTCGTCGCAGTCCAAG+GGG 0.678623 7_4:-20401879 None:intergenic
GTGCAAAGAAGTGAATCCCG+AGG 0.683875 7_4:-20401993 None:intergenic
AAAGAAGTGAATCCCGAGGG+AGG 0.688647 7_4:-20401989 None:intergenic
CCATAGCTAGGATTACAGAA+GGG 0.691325 7_4:-20401714 None:intergenic
ACTCGCCAACCATAACGGAG+GGG 0.704620 7_4:-20401670 None:intergenic
ACAACACGCGCCTCCCAACG+CGG 0.715769 7_4:-20402164 None:intergenic
ACTATGCTCCCTGAAACACA+AGG 0.725699 7_4:+20402540 Msa1144410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGGATTAAATTATTTATTA+TGG - chr7_4:20401569-20401588 None:intergenic 10.0%
!!! TATTTTATAAAGAACTTTTT+TGG - chr7_4:20401800-20401819 None:intergenic 10.0%
!!! ATGGATTAAATTATTTATTA+TGG - chr7_4:20401569-20401588 None:intergenic 10.0%
!!! TATTTTATAAAGAACTTTTT+TGG - chr7_4:20401800-20401819 None:intergenic 10.0%
!! TATTGATAGAAATGAATTAA+TGG - chr7_4:20400655-20400674 None:intergenic 15.0%
!! TATTGATAGAAATGAATTAA+TGG - chr7_4:20400655-20400674 None:intergenic 15.0%
!! ATAGAAATGAATTAATGGTA+TGG - chr7_4:20400650-20400669 None:intergenic 20.0%
!! ATCAAAAAAGAAGATTTCTT+AGG + chr7_4:20400679-20400698 Msa1144410:intron 20.0%
!! GTTATTATTGTAACAGATAT+TGG + chr7_4:20400975-20400994 Msa1144410:intron 20.0%
!! ATAGAAATGAATTAATGGTA+TGG - chr7_4:20400650-20400669 None:intergenic 20.0%
!! ATCAAAAAAGAAGATTTCTT+AGG + chr7_4:20400679-20400698 Msa1144410:intron 20.0%
!! GTTATTATTGTAACAGATAT+TGG + chr7_4:20400975-20400994 Msa1144410:intron 20.0%
! TCTTTCTTGTACAAACAAAT+GGG - chr7_4:20400757-20400776 None:intergenic 25.0%
! TTCTTTCTTGTACAAACAAA+TGG - chr7_4:20400758-20400777 None:intergenic 25.0%
! CAAGAAAGAATAGAGATATA+AGG + chr7_4:20400768-20400787 Msa1144410:intron 25.0%
!! AAGGTCTCTTTTTATATAGA+TGG - chr7_4:20401018-20401037 None:intergenic 25.0%
! AAAAAGAGACCTTAAAGTAA+CGG + chr7_4:20401025-20401044 Msa1144410:CDS 25.0%
! AATATAGGTTTATGATACCT+AGG - chr7_4:20401070-20401089 None:intergenic 25.0%
! GAAAATAACATGTCATTCAA+TGG - chr7_4:20401588-20401607 None:intergenic 25.0%
!!! TTGAATGACATGTTATTTTC+AGG + chr7_4:20401588-20401607 Msa1144410:intron 25.0%
!!! TATTTTCAGGTATTTCTGAA+TGG + chr7_4:20401601-20401620 Msa1144410:intron 25.0%
!! AATATCTGATTCTAAAGAAG+AGG + chr7_4:20401816-20401835 Msa1144410:CDS 25.0%
! TCTTTCTTGTACAAACAAAT+GGG - chr7_4:20400757-20400776 None:intergenic 25.0%
! TTCTTTCTTGTACAAACAAA+TGG - chr7_4:20400758-20400777 None:intergenic 25.0%
! CAAGAAAGAATAGAGATATA+AGG + chr7_4:20400768-20400787 Msa1144410:intron 25.0%
!! AAGGTCTCTTTTTATATAGA+TGG - chr7_4:20401018-20401037 None:intergenic 25.0%
! AAAAAGAGACCTTAAAGTAA+CGG + chr7_4:20401025-20401044 Msa1144410:CDS 25.0%
! AATATAGGTTTATGATACCT+AGG - chr7_4:20401070-20401089 None:intergenic 25.0%
! GAAAATAACATGTCATTCAA+TGG - chr7_4:20401588-20401607 None:intergenic 25.0%
!!! TTGAATGACATGTTATTTTC+AGG + chr7_4:20401588-20401607 Msa1144410:intron 25.0%
!!! TATTTTCAGGTATTTCTGAA+TGG + chr7_4:20401601-20401620 Msa1144410:intron 25.0%
!! AATATCTGATTCTAAAGAAG+AGG + chr7_4:20401816-20401835 Msa1144410:CDS 25.0%
ATAAACCTATATTCTCCCAT+AGG + chr7_4:20401077-20401096 Msa1144410:CDS 30.0%
AAAATTAGAAAACTTGCCTC+AGG - chr7_4:20401335-20401354 None:intergenic 30.0%
! AAACATGGATTTAGTTTAGC+TGG - chr7_4:20401536-20401555 None:intergenic 30.0%
TATGGCAACATTGATAAACA+TGG - chr7_4:20401551-20401570 None:intergenic 30.0%
GTAGGATACATTTCAAACTA+TGG + chr7_4:20401634-20401653 Msa1144410:CDS 30.0%
CCCTGTTATCTCTTTAATAT+CGG - chr7_4:20401857-20401876 None:intergenic 30.0%
CCGATATTAAAGAGATAACA+GGG + chr7_4:20401854-20401873 Msa1144410:CDS 30.0%
AATAATCTCACTTCTGACAT+TGG + chr7_4:20402209-20402228 Msa1144410:CDS 30.0%
AAAACATTGGAGGAAATAGA+AGG + chr7_4:20402564-20402583 Msa1144410:CDS 30.0%
AAACATTGGAGGAAATAGAA+GGG + chr7_4:20402565-20402584 Msa1144410:CDS 30.0%
! AGTTGTAAAAGTCTTGTCAT+TGG - chr7_4:20402667-20402686 None:intergenic 30.0%
! TGACAAGACTTTTACAACTA+CGG + chr7_4:20402668-20402687 Msa1144410:CDS 30.0%
ATAAACCTATATTCTCCCAT+AGG + chr7_4:20401077-20401096 Msa1144410:CDS 30.0%
AAAATTAGAAAACTTGCCTC+AGG - chr7_4:20401335-20401354 None:intergenic 30.0%
! AAACATGGATTTAGTTTAGC+TGG - chr7_4:20401536-20401555 None:intergenic 30.0%
TATGGCAACATTGATAAACA+TGG - chr7_4:20401551-20401570 None:intergenic 30.0%
GTAGGATACATTTCAAACTA+TGG + chr7_4:20401634-20401653 Msa1144410:CDS 30.0%
CCCTGTTATCTCTTTAATAT+CGG - chr7_4:20401857-20401876 None:intergenic 30.0%
CCGATATTAAAGAGATAACA+GGG + chr7_4:20401854-20401873 Msa1144410:CDS 30.0%
AATAATCTCACTTCTGACAT+TGG + chr7_4:20402209-20402228 Msa1144410:CDS 30.0%
AAAACATTGGAGGAAATAGA+AGG + chr7_4:20402564-20402583 Msa1144410:CDS 30.0%
AAACATTGGAGGAAATAGAA+GGG + chr7_4:20402565-20402584 Msa1144410:CDS 30.0%
! AGTTGTAAAAGTCTTGTCAT+TGG - chr7_4:20402667-20402686 None:intergenic 30.0%
! TGACAAGACTTTTACAACTA+CGG + chr7_4:20402668-20402687 Msa1144410:CDS 30.0%
!! AACAGTTCTGAAATCTCTTG+AGG + chr7_4:20400518-20400537 Msa1144410:CDS 35.0%
! CTGAAATCTCTTGAGGATTT+TGG + chr7_4:20400525-20400544 Msa1144410:CDS 35.0%
!! CAAGCAAACTTGTTCCTTTT+GGG - chr7_4:20400564-20400583 None:intergenic 35.0%
!! ACAAGCAAACTTGTTCCTTT+TGG - chr7_4:20400565-20400584 None:intergenic 35.0%
TGTACTTACCATATCCAAGT+AGG - chr7_4:20400620-20400639 None:intergenic 35.0%
! TTTGTACGTCCGTTACTTTA+AGG - chr7_4:20401037-20401056 None:intergenic 35.0%
GTACAAATTGAAGTTCTCCT+AGG + chr7_4:20401050-20401069 Msa1144410:CDS 35.0%
AAGAACCTATGGGAGAATAT+AGG - chr7_4:20401085-20401104 None:intergenic 35.0%
TCCAACGAAGAAAATCAAAC+CGG - chr7_4:20401162-20401181 None:intergenic 35.0%
AACATGAGAAATGCGTAGTT+TGG - chr7_4:20401206-20401225 None:intergenic 35.0%
AACTACGCATTTCTCATGTT+TGG + chr7_4:20401206-20401225 Msa1144410:CDS 35.0%
ATAAACAGGAGCAATCAAGA+AGG - chr7_4:20401264-20401283 None:intergenic 35.0%
GAGACTTCAGATGTATAAAC+AGG - chr7_4:20401278-20401297 None:intergenic 35.0%
GAAAATCGTAATCTCAACGA+CGG - chr7_4:20401392-20401411 None:intergenic 35.0%
! GATTTAGTTTAGCTGGTTGA+TGG - chr7_4:20401529-20401548 None:intergenic 35.0%
! TTTCAGGTATTTCTGAATGG+AGG + chr7_4:20401604-20401623 Msa1144410:intron 35.0%
! TTCAGGTATTTCTGAATGGA+GGG + chr7_4:20401605-20401624 Msa1144410:intron 35.0%
GCCGATATTAAAGAGATAAC+AGG + chr7_4:20401853-20401872 Msa1144410:CDS 35.0%
GTTTCAGTCACAAAAGTTCA+AGG + chr7_4:20401904-20401923 Msa1144410:CDS 35.0%
AACGCGGTCTAATAAAAAAG+TGG - chr7_4:20402151-20402170 None:intergenic 35.0%
!!! ACTTTTTTATTAGACCGCGT+TGG + chr7_4:20402150-20402169 Msa1144410:CDS 35.0%
!!! CTTTTTTATTAGACCGCGTT+GGG + chr7_4:20402151-20402170 Msa1144410:CDS 35.0%
TATTGAGAAAGTAGCTGCAT+AGG - chr7_4:20402313-20402332 None:intergenic 35.0%
! TATGCAGCTACTTTCTCAAT+AGG + chr7_4:20402312-20402331 Msa1144410:CDS 35.0%
GAACTATAAACCCACGTAAT+TGG - chr7_4:20402345-20402364 None:intergenic 35.0%
!! GTTCTGAAATATTTCCGTTG+AGG + chr7_4:20402361-20402380 Msa1144410:CDS 35.0%
! ATGTTTTGCCTTGTGTTTCA+GGG - chr7_4:20402551-20402570 None:intergenic 35.0%
! AATGTTTTGCCTTGTGTTTC+AGG - chr7_4:20402552-20402571 None:intergenic 35.0%
TGAAACACAAGGCAAAACAT+TGG + chr7_4:20402551-20402570 Msa1144410:CDS 35.0%
TTTCCTCCATAGATTACCAA+AGG - chr7_4:20402592-20402611 None:intergenic 35.0%
!! AACAGTTCTGAAATCTCTTG+AGG + chr7_4:20400518-20400537 Msa1144410:CDS 35.0%
! CTGAAATCTCTTGAGGATTT+TGG + chr7_4:20400525-20400544 Msa1144410:CDS 35.0%
!! CAAGCAAACTTGTTCCTTTT+GGG - chr7_4:20400564-20400583 None:intergenic 35.0%
!! ACAAGCAAACTTGTTCCTTT+TGG - chr7_4:20400565-20400584 None:intergenic 35.0%
TGTACTTACCATATCCAAGT+AGG - chr7_4:20400620-20400639 None:intergenic 35.0%
! TTTGTACGTCCGTTACTTTA+AGG - chr7_4:20401037-20401056 None:intergenic 35.0%
GTACAAATTGAAGTTCTCCT+AGG + chr7_4:20401050-20401069 Msa1144410:CDS 35.0%
AAGAACCTATGGGAGAATAT+AGG - chr7_4:20401085-20401104 None:intergenic 35.0%
TCCAACGAAGAAAATCAAAC+CGG - chr7_4:20401162-20401181 None:intergenic 35.0%
AACATGAGAAATGCGTAGTT+TGG - chr7_4:20401206-20401225 None:intergenic 35.0%
AACTACGCATTTCTCATGTT+TGG + chr7_4:20401206-20401225 Msa1144410:CDS 35.0%
ATAAACAGGAGCAATCAAGA+AGG - chr7_4:20401264-20401283 None:intergenic 35.0%
GAGACTTCAGATGTATAAAC+AGG - chr7_4:20401278-20401297 None:intergenic 35.0%
GAAAATCGTAATCTCAACGA+CGG - chr7_4:20401392-20401411 None:intergenic 35.0%
! GATTTAGTTTAGCTGGTTGA+TGG - chr7_4:20401529-20401548 None:intergenic 35.0%
! TTTCAGGTATTTCTGAATGG+AGG + chr7_4:20401604-20401623 Msa1144410:intron 35.0%
! TTCAGGTATTTCTGAATGGA+GGG + chr7_4:20401605-20401624 Msa1144410:intron 35.0%
GCCGATATTAAAGAGATAAC+AGG + chr7_4:20401853-20401872 Msa1144410:CDS 35.0%
GTTTCAGTCACAAAAGTTCA+AGG + chr7_4:20401904-20401923 Msa1144410:CDS 35.0%
AACGCGGTCTAATAAAAAAG+TGG - chr7_4:20402151-20402170 None:intergenic 35.0%
!!! ACTTTTTTATTAGACCGCGT+TGG + chr7_4:20402150-20402169 Msa1144410:CDS 35.0%
!!! CTTTTTTATTAGACCGCGTT+GGG + chr7_4:20402151-20402170 Msa1144410:CDS 35.0%
TATTGAGAAAGTAGCTGCAT+AGG - chr7_4:20402313-20402332 None:intergenic 35.0%
! TATGCAGCTACTTTCTCAAT+AGG + chr7_4:20402312-20402331 Msa1144410:CDS 35.0%
GAACTATAAACCCACGTAAT+TGG - chr7_4:20402345-20402364 None:intergenic 35.0%
!! GTTCTGAAATATTTCCGTTG+AGG + chr7_4:20402361-20402380 Msa1144410:CDS 35.0%
! ATGTTTTGCCTTGTGTTTCA+GGG - chr7_4:20402551-20402570 None:intergenic 35.0%
! AATGTTTTGCCTTGTGTTTC+AGG - chr7_4:20402552-20402571 None:intergenic 35.0%
TGAAACACAAGGCAAAACAT+TGG + chr7_4:20402551-20402570 Msa1144410:CDS 35.0%
TTTCCTCCATAGATTACCAA+AGG - chr7_4:20402592-20402611 None:intergenic 35.0%
! TTCCTTTTGGGCTTCTTTTG+AGG - chr7_4:20400552-20400571 None:intergenic 40.0%
TCTATGACTTCCATCCTACT+TGG + chr7_4:20400603-20400622 Msa1144410:CDS 40.0%
ACTTCCATCCTACTTGGATA+TGG + chr7_4:20400609-20400628 Msa1144410:CDS 40.0%
CTTACCATATCCAAGTAGGA+TGG - chr7_4:20400616-20400635 None:intergenic 40.0%
ACAGATATTGGTGTGATGAG+TGG + chr7_4:20400987-20401006 Msa1144410:intron 40.0%
CCTGCAATGTAAGAACCTAT+GGG - chr7_4:20401095-20401114 None:intergenic 40.0%
CCATAGGTTCTTACATTGCA+GGG + chr7_4:20401093-20401112 Msa1144410:CDS 40.0%
TTCGTTGGAGCTGTACTTAT+GGG + chr7_4:20401173-20401192 Msa1144410:CDS 40.0%
ATGTTTGGTCGTTTCTTTGC+TGG + chr7_4:20401221-20401240 Msa1144410:CDS 40.0%
!! CTGAATGGAGGGATTTTAGT+AGG + chr7_4:20401616-20401635 Msa1144410:CDS 40.0%
CCATAGCTAGGATTACAGAA+GGG - chr7_4:20401717-20401736 None:intergenic 40.0%
GTCACAAAAGTTCAAGGCAA+AGG + chr7_4:20401910-20401929 Msa1144410:CDS 40.0%
ATAAAGATGTGACGAACTGC+AGG - chr7_4:20401967-20401986 None:intergenic 40.0%
! TAGTCCCAGAATCTTTGAGA+AGG + chr7_4:20402047-20402066 Msa1144410:CDS 40.0%
TGCGAGAAGCTTATTTGTGT+CGG - chr7_4:20402085-20402104 None:intergenic 40.0%
GAAAACAGTGTTCGTCTTAG+TGG + chr7_4:20402125-20402144 Msa1144410:CDS 40.0%
! GTGTTGTTGTTAACCAGTGT+AGG + chr7_4:20402180-20402199 Msa1144410:CDS 40.0%
! TTGTTGTTAACCAGTGTAGG+TGG + chr7_4:20402183-20402202 Msa1144410:CDS 40.0%
TGTTGTTAACCAGTGTAGGT+GGG + chr7_4:20402184-20402203 Msa1144410:CDS 40.0%
GATTATTAACCCACCTACAC+TGG - chr7_4:20402196-20402215 None:intergenic 40.0%
! GCTACTTTCTCAATAGGATC+AGG + chr7_4:20402318-20402337 Msa1144410:CDS 40.0%
! TGGGGCTTTCTTTCTTTTTG+CGG + chr7_4:20402485-20402504 Msa1144410:CDS 40.0%
AACACAAGGCAAAACATTGG+AGG + chr7_4:20402554-20402573 Msa1144410:CDS 40.0%
! AAGGGTCCTTTGGTAATCTA+TGG + chr7_4:20402583-20402602 Msa1144410:CDS 40.0%
! TCTTGTCATTGGTGCTTAAC+TGG - chr7_4:20402656-20402675 None:intergenic 40.0%
! TTCCTTTTGGGCTTCTTTTG+AGG - chr7_4:20400552-20400571 None:intergenic 40.0%
TCTATGACTTCCATCCTACT+TGG + chr7_4:20400603-20400622 Msa1144410:CDS 40.0%
ACTTCCATCCTACTTGGATA+TGG + chr7_4:20400609-20400628 Msa1144410:CDS 40.0%
CTTACCATATCCAAGTAGGA+TGG - chr7_4:20400616-20400635 None:intergenic 40.0%
ACAGATATTGGTGTGATGAG+TGG + chr7_4:20400987-20401006 Msa1144410:intron 40.0%
CCTGCAATGTAAGAACCTAT+GGG - chr7_4:20401095-20401114 None:intergenic 40.0%
CCATAGGTTCTTACATTGCA+GGG + chr7_4:20401093-20401112 Msa1144410:CDS 40.0%
TTCGTTGGAGCTGTACTTAT+GGG + chr7_4:20401173-20401192 Msa1144410:CDS 40.0%
ATGTTTGGTCGTTTCTTTGC+TGG + chr7_4:20401221-20401240 Msa1144410:CDS 40.0%
!! CTGAATGGAGGGATTTTAGT+AGG + chr7_4:20401616-20401635 Msa1144410:CDS 40.0%
CCATAGCTAGGATTACAGAA+GGG - chr7_4:20401717-20401736 None:intergenic 40.0%
GTCACAAAAGTTCAAGGCAA+AGG + chr7_4:20401910-20401929 Msa1144410:CDS 40.0%
ATAAAGATGTGACGAACTGC+AGG - chr7_4:20401967-20401986 None:intergenic 40.0%
! TAGTCCCAGAATCTTTGAGA+AGG + chr7_4:20402047-20402066 Msa1144410:CDS 40.0%
TGCGAGAAGCTTATTTGTGT+CGG - chr7_4:20402085-20402104 None:intergenic 40.0%
GAAAACAGTGTTCGTCTTAG+TGG + chr7_4:20402125-20402144 Msa1144410:CDS 40.0%
! GTGTTGTTGTTAACCAGTGT+AGG + chr7_4:20402180-20402199 Msa1144410:CDS 40.0%
! TTGTTGTTAACCAGTGTAGG+TGG + chr7_4:20402183-20402202 Msa1144410:CDS 40.0%
TGTTGTTAACCAGTGTAGGT+GGG + chr7_4:20402184-20402203 Msa1144410:CDS 40.0%
GATTATTAACCCACCTACAC+TGG - chr7_4:20402196-20402215 None:intergenic 40.0%
! GCTACTTTCTCAATAGGATC+AGG + chr7_4:20402318-20402337 Msa1144410:CDS 40.0%
! TGGGGCTTTCTTTCTTTTTG+CGG + chr7_4:20402485-20402504 Msa1144410:CDS 40.0%
AACACAAGGCAAAACATTGG+AGG + chr7_4:20402554-20402573 Msa1144410:CDS 40.0%
! AAGGGTCCTTTGGTAATCTA+TGG + chr7_4:20402583-20402602 Msa1144410:CDS 40.0%
! TCTTGTCATTGGTGCTTAAC+TGG - chr7_4:20402656-20402675 None:intergenic 40.0%
GTCCTCAAAAGAAGCCCAAA+AGG + chr7_4:20400547-20400566 Msa1144410:CDS 45.0%
TGCTTGTGCTTGTGCTATCT+TGG + chr7_4:20400578-20400597 Msa1144410:CDS 45.0%
CCCATAGGTTCTTACATTGC+AGG + chr7_4:20401092-20401111 Msa1144410:CDS 45.0%
CCCTGCAATGTAAGAACCTA+TGG - chr7_4:20401096-20401115 None:intergenic 45.0%
CGTTACACGATTGTTCTTGC+CGG + chr7_4:20401140-20401159 Msa1144410:CDS 45.0%
!!! GCCGGTTTGATTTTCTTCGT+TGG + chr7_4:20401158-20401177 Msa1144410:CDS 45.0%
CTTCGTTGGAGCTGTACTTA+TGG + chr7_4:20401172-20401191 Msa1144410:CDS 45.0%
!! TTCTTTGCTGGTGTTGGCAT+AGG + chr7_4:20401233-20401252 Msa1144410:CDS 45.0%
!! TCTTTGCTGGTGTTGGCATA+GGG + chr7_4:20401234-20401253 Msa1144410:CDS 45.0%
TAGAAAACTTGCCTCAGGCA+AGG - chr7_4:20401330-20401349 None:intergenic 45.0%
AGCTAGGATTACAGAAGGGA+TGG - chr7_4:20401713-20401732 None:intergenic 45.0%
CCCTTCTGTAATCCTAGCTA+TGG + chr7_4:20401714-20401733 Msa1144410:CDS 45.0%
GCCATAGCTAGGATTACAGA+AGG - chr7_4:20401718-20401737 None:intergenic 45.0%
! AAGTTCAAGGCAAAGGCGTA+TGG + chr7_4:20401917-20401936 Msa1144410:CDS 45.0%
CACATCTTTATTGCCTCCCT+CGG + chr7_4:20401976-20401995 Msa1144410:CDS 45.0%
ACATCTTTATTGCCTCCCTC+GGG + chr7_4:20401977-20401996 Msa1144410:CDS 45.0%
TGCAAAGAAGTGAATCCCGA+GGG - chr7_4:20401995-20402014 None:intergenic 45.0%
CCAGCCTTCTCAAAGATTCT+GGG - chr7_4:20402054-20402073 None:intergenic 45.0%
! CCAGAATCTTTGAGAAGGCT+GGG + chr7_4:20402052-20402071 Msa1144410:CDS 45.0%
! TTTTATTAGACCGCGTTGGG+AGG + chr7_4:20402154-20402173 Msa1144410:CDS 45.0%
ATTCAAACGCCACACTGACA+TGG + chr7_4:20402256-20402275 Msa1144410:CDS 45.0%
TTCAAACGCCACACTGACAT+GGG + chr7_4:20402257-20402276 Msa1144410:CDS 45.0%
TAGGATCAGGTCCAATTACG+TGG + chr7_4:20402331-20402350 Msa1144410:CDS 45.0%
AGGATCAGGTCCAATTACGT+GGG + chr7_4:20402332-20402351 Msa1144410:CDS 45.0%
TATTGGTGCGGTGGTGAATA+GGG + chr7_4:20402404-20402423 Msa1144410:CDS 45.0%
AAGAAAGAAAGCCCCACCAA+TGG - chr7_4:20402481-20402500 None:intergenic 45.0%
! GGGGCTTTCTTTCTTTTTGC+GGG + chr7_4:20402486-20402505 Msa1144410:CDS 45.0%
ACTATGCTCCCTGAAACACA+AGG + chr7_4:20402540-20402559 Msa1144410:CDS 45.0%
GAGGAAATAGAAGGGTCCTT+TGG + chr7_4:20402573-20402592 Msa1144410:CDS 45.0%
! GGTCCTTTGGTAATCTATGG+AGG + chr7_4:20402586-20402605 Msa1144410:CDS 45.0%
GTCCTCAAAAGAAGCCCAAA+AGG + chr7_4:20400547-20400566 Msa1144410:CDS 45.0%
TGCTTGTGCTTGTGCTATCT+TGG + chr7_4:20400578-20400597 Msa1144410:CDS 45.0%
CCCATAGGTTCTTACATTGC+AGG + chr7_4:20401092-20401111 Msa1144410:CDS 45.0%
CCCTGCAATGTAAGAACCTA+TGG - chr7_4:20401096-20401115 None:intergenic 45.0%
CGTTACACGATTGTTCTTGC+CGG + chr7_4:20401140-20401159 Msa1144410:CDS 45.0%
!!! GCCGGTTTGATTTTCTTCGT+TGG + chr7_4:20401158-20401177 Msa1144410:CDS 45.0%
CTTCGTTGGAGCTGTACTTA+TGG + chr7_4:20401172-20401191 Msa1144410:CDS 45.0%
!! TTCTTTGCTGGTGTTGGCAT+AGG + chr7_4:20401233-20401252 Msa1144410:CDS 45.0%
!! TCTTTGCTGGTGTTGGCATA+GGG + chr7_4:20401234-20401253 Msa1144410:CDS 45.0%
TAGAAAACTTGCCTCAGGCA+AGG - chr7_4:20401330-20401349 None:intergenic 45.0%
AGCTAGGATTACAGAAGGGA+TGG - chr7_4:20401713-20401732 None:intergenic 45.0%
CCCTTCTGTAATCCTAGCTA+TGG + chr7_4:20401714-20401733 Msa1144410:CDS 45.0%
GCCATAGCTAGGATTACAGA+AGG - chr7_4:20401718-20401737 None:intergenic 45.0%
! AAGTTCAAGGCAAAGGCGTA+TGG + chr7_4:20401917-20401936 Msa1144410:CDS 45.0%
CACATCTTTATTGCCTCCCT+CGG + chr7_4:20401976-20401995 Msa1144410:CDS 45.0%
ACATCTTTATTGCCTCCCTC+GGG + chr7_4:20401977-20401996 Msa1144410:CDS 45.0%
TGCAAAGAAGTGAATCCCGA+GGG - chr7_4:20401995-20402014 None:intergenic 45.0%
CCAGCCTTCTCAAAGATTCT+GGG - chr7_4:20402054-20402073 None:intergenic 45.0%
! CCAGAATCTTTGAGAAGGCT+GGG + chr7_4:20402052-20402071 Msa1144410:CDS 45.0%
! TTTTATTAGACCGCGTTGGG+AGG + chr7_4:20402154-20402173 Msa1144410:CDS 45.0%
ATTCAAACGCCACACTGACA+TGG + chr7_4:20402256-20402275 Msa1144410:CDS 45.0%
TTCAAACGCCACACTGACAT+GGG + chr7_4:20402257-20402276 Msa1144410:CDS 45.0%
TAGGATCAGGTCCAATTACG+TGG + chr7_4:20402331-20402350 Msa1144410:CDS 45.0%
AGGATCAGGTCCAATTACGT+GGG + chr7_4:20402332-20402351 Msa1144410:CDS 45.0%
TATTGGTGCGGTGGTGAATA+GGG + chr7_4:20402404-20402423 Msa1144410:CDS 45.0%
AAGAAAGAAAGCCCCACCAA+TGG - chr7_4:20402481-20402500 None:intergenic 45.0%
! GGGGCTTTCTTTCTTTTTGC+GGG + chr7_4:20402486-20402505 Msa1144410:CDS 45.0%
ACTATGCTCCCTGAAACACA+AGG + chr7_4:20402540-20402559 Msa1144410:CDS 45.0%
GAGGAAATAGAAGGGTCCTT+TGG + chr7_4:20402573-20402592 Msa1144410:CDS 45.0%
! GGTCCTTTGGTAATCTATGG+AGG + chr7_4:20402586-20402605 Msa1144410:CDS 45.0%
TTGCAGGGAGACTTTCTGAC+TGG + chr7_4:20401108-20401127 Msa1144410:CDS 50.0%
GGGAGACTTTCTGACTGGAT+TGG + chr7_4:20401113-20401132 Msa1144410:CDS 50.0%
GGTCGTTTCTTTGCTGGTGT+TGG + chr7_4:20401227-20401246 Msa1144410:CDS 50.0%
GAAGCCACGAGATGAAGTAG+GGG - chr7_4:20401300-20401319 None:intergenic 50.0%
GGAAGCCACGAGATGAAGTA+GGG - chr7_4:20401301-20401320 None:intergenic 50.0%
AGGAAGCCACGAGATGAAGT+AGG - chr7_4:20401302-20401321 None:intergenic 50.0%
!! GCTGGTTGATGGATGATGAC+TGG - chr7_4:20401518-20401537 None:intergenic 50.0%
GCATCACTCGCCAACCATAA+CGG - chr7_4:20401678-20401697 None:intergenic 50.0%
TATGGTTGGCGAGTGATGCT+TGG + chr7_4:20401679-20401698 Msa1144410:CDS 50.0%
TGGCGAGTGATGCTTGGAAT+CGG + chr7_4:20401685-20401704 Msa1144410:CDS 50.0%
TGGCTAATACGGCCATAGCT+AGG - chr7_4:20401729-20401748 None:intergenic 50.0%
! TGACTCGGGCATGGCTAATA+CGG - chr7_4:20401740-20401759 None:intergenic 50.0%
AACGAGCCATCTAGGTGACT+CGG - chr7_4:20401755-20401774 None:intergenic 50.0%
TCGTTGCCAAGGGTCGATTA+GGG + chr7_4:20401770-20401789 Msa1144410:CDS 50.0%
AGAGATAACAGGGATCCCCT+TGG + chr7_4:20401864-20401883 Msa1144410:CDS 50.0%
ATGTGACGAACTGCAGGTGT+AGG - chr7_4:20401961-20401980 None:intergenic 50.0%
AAAGAAGTGAATCCCGAGGG+AGG - chr7_4:20401992-20402011 None:intergenic 50.0%
GTGCAAAGAAGTGAATCCCG+AGG - chr7_4:20401996-20402015 None:intergenic 50.0%
CACTTCTTTGCACAAGCCAC+TGG + chr7_4:20402003-20402022 Msa1144410:CDS 50.0%
AACAACAGCGTCTATGCCAG+TGG - chr7_4:20402022-20402041 None:intergenic 50.0%
! CCCAGAATCTTTGAGAAGGC+TGG + chr7_4:20402051-20402070 Msa1144410:CDS 50.0%
CCCAGCCTTCTCAAAGATTC+TGG - chr7_4:20402055-20402074 None:intergenic 50.0%
CTTCTCGCAACTGTAGCTGT+TGG + chr7_4:20402096-20402115 Msa1144410:CDS 50.0%
CGAAATAGCCCATGTCAGTG+TGG - chr7_4:20402268-20402287 None:intergenic 50.0%
TCAAGGCGTGTCTATTGGTG+CGG + chr7_4:20402392-20402411 Msa1144410:CDS 50.0%
CTATTGGTGCGGTGGTGAAT+AGG + chr7_4:20402403-20402422 Msa1144410:CDS 50.0%
GGACAGGGACAGAAAAGTCA+TGG - chr7_4:20402448-20402467 None:intergenic 50.0%
! GACTTTTCTGTCCCTGTCCA+AGG + chr7_4:20402449-20402468 Msa1144410:CDS 50.0%
!! AATGGTGATGGCCTTGGACA+GGG - chr7_4:20402463-20402482 None:intergenic 50.0%
TTGCAGGGAGACTTTCTGAC+TGG + chr7_4:20401108-20401127 Msa1144410:CDS 50.0%
GGGAGACTTTCTGACTGGAT+TGG + chr7_4:20401113-20401132 Msa1144410:CDS 50.0%
GGTCGTTTCTTTGCTGGTGT+TGG + chr7_4:20401227-20401246 Msa1144410:CDS 50.0%
GAAGCCACGAGATGAAGTAG+GGG - chr7_4:20401300-20401319 None:intergenic 50.0%
GGAAGCCACGAGATGAAGTA+GGG - chr7_4:20401301-20401320 None:intergenic 50.0%
AGGAAGCCACGAGATGAAGT+AGG - chr7_4:20401302-20401321 None:intergenic 50.0%
!! GCTGGTTGATGGATGATGAC+TGG - chr7_4:20401518-20401537 None:intergenic 50.0%
GCATCACTCGCCAACCATAA+CGG - chr7_4:20401678-20401697 None:intergenic 50.0%
TATGGTTGGCGAGTGATGCT+TGG + chr7_4:20401679-20401698 Msa1144410:CDS 50.0%
TGGCGAGTGATGCTTGGAAT+CGG + chr7_4:20401685-20401704 Msa1144410:CDS 50.0%
TGGCTAATACGGCCATAGCT+AGG - chr7_4:20401729-20401748 None:intergenic 50.0%
! TGACTCGGGCATGGCTAATA+CGG - chr7_4:20401740-20401759 None:intergenic 50.0%
AACGAGCCATCTAGGTGACT+CGG - chr7_4:20401755-20401774 None:intergenic 50.0%
TCGTTGCCAAGGGTCGATTA+GGG + chr7_4:20401770-20401789 Msa1144410:CDS 50.0%
AGAGATAACAGGGATCCCCT+TGG + chr7_4:20401864-20401883 Msa1144410:CDS 50.0%
ATGTGACGAACTGCAGGTGT+AGG - chr7_4:20401961-20401980 None:intergenic 50.0%
AAAGAAGTGAATCCCGAGGG+AGG - chr7_4:20401992-20402011 None:intergenic 50.0%
GTGCAAAGAAGTGAATCCCG+AGG - chr7_4:20401996-20402015 None:intergenic 50.0%
CACTTCTTTGCACAAGCCAC+TGG + chr7_4:20402003-20402022 Msa1144410:CDS 50.0%
AACAACAGCGTCTATGCCAG+TGG - chr7_4:20402022-20402041 None:intergenic 50.0%
! CCCAGAATCTTTGAGAAGGC+TGG + chr7_4:20402051-20402070 Msa1144410:CDS 50.0%
CCCAGCCTTCTCAAAGATTC+TGG - chr7_4:20402055-20402074 None:intergenic 50.0%
CTTCTCGCAACTGTAGCTGT+TGG + chr7_4:20402096-20402115 Msa1144410:CDS 50.0%
CGAAATAGCCCATGTCAGTG+TGG - chr7_4:20402268-20402287 None:intergenic 50.0%
TCAAGGCGTGTCTATTGGTG+CGG + chr7_4:20402392-20402411 Msa1144410:CDS 50.0%
CTATTGGTGCGGTGGTGAAT+AGG + chr7_4:20402403-20402422 Msa1144410:CDS 50.0%
GGACAGGGACAGAAAAGTCA+TGG - chr7_4:20402448-20402467 None:intergenic 50.0%
! GACTTTTCTGTCCCTGTCCA+AGG + chr7_4:20402449-20402468 Msa1144410:CDS 50.0%
!! AATGGTGATGGCCTTGGACA+GGG - chr7_4:20402463-20402482 None:intergenic 50.0%
GTCTCCCCTACTTCATCTCG+TGG + chr7_4:20401293-20401312 Msa1144410:CDS 55.0%
CTTCCTCACTTCCTTGCCTG+AGG + chr7_4:20401316-20401335 Msa1144410:CDS 55.0%
TTGCCTCAGGCAAGGAAGTG+AGG - chr7_4:20401322-20401341 None:intergenic 55.0%
TCAAAGCTCCCCCTCCGTTA+TGG + chr7_4:20401661-20401680 Msa1144410:CDS 55.0%
! ACTCGCCAACCATAACGGAG+GGG - chr7_4:20401673-20401692 None:intergenic 55.0%
! CACTCGCCAACCATAACGGA+GGG - chr7_4:20401674-20401693 None:intergenic 55.0%
TCACTCGCCAACCATAACGG+AGG - chr7_4:20401675-20401694 None:intergenic 55.0%
ACGAGCCATCTAGGTGACTC+GGG - chr7_4:20401754-20401773 None:intergenic 55.0%
ACCTAGATGGCTCGTTGCCA+AGG + chr7_4:20401759-20401778 Msa1144410:CDS 55.0%
CCTAGATGGCTCGTTGCCAA+GGG + chr7_4:20401760-20401779 Msa1144410:CDS 55.0%
CTCGTTGCCAAGGGTCGATT+AGG + chr7_4:20401769-20401788 Msa1144410:CDS 55.0%
CGTTGCCAAGGGTCGATTAG+GGG + chr7_4:20401771-20401790 Msa1144410:CDS 55.0%
AAGTCGTCGTCGCAGTCCAA+GGG - chr7_4:20401883-20401902 None:intergenic 55.0%
AAAGTCGTCGTCGCAGTCCA+AGG - chr7_4:20401884-20401903 None:intergenic 55.0%
CCTTGAGCTCGAAGCCTCAA+CGG - chr7_4:20402378-20402397 None:intergenic 55.0%
CGAGCTCAAGGCGTGTCTAT+TGG + chr7_4:20402387-20402406 Msa1144410:CDS 55.0%
GTGGTGAATAGGGTCACGAG+CGG + chr7_4:20402414-20402433 Msa1144410:CDS 55.0%
TGGTGAATAGGGTCACGAGC+GGG + chr7_4:20402415-20402434 Msa1144410:CDS 55.0%
!! CAATGGTGATGGCCTTGGAC+AGG - chr7_4:20402464-20402483 None:intergenic 55.0%
CTGTCCAAGGCCATCACCAT+TGG + chr7_4:20402462-20402481 Msa1144410:CDS 55.0%
TCCAAGGCCATCACCATTGG+TGG + chr7_4:20402465-20402484 Msa1144410:CDS 55.0%
CCAAGGCCATCACCATTGGT+GGG + chr7_4:20402466-20402485 Msa1144410:CDS 55.0%
CAAGGCCATCACCATTGGTG+GGG + chr7_4:20402467-20402486 Msa1144410:CDS 55.0%
GAAAGCCCCACCAATGGTGA+TGG - chr7_4:20402475-20402494 None:intergenic 55.0%
! CGGGCATTGCAATTGTCGCA+TGG + chr7_4:20402505-20402524 Msa1144410:CDS 55.0%
!!! TCAGCTGTGGCACTGGCTTT+TGG - chr7_4:20402615-20402634 None:intergenic 55.0%
AAAGCCAGTGCCACAGCTGA+AGG + chr7_4:20402615-20402634 Msa1144410:CDS 55.0%
GCCACAGCTGAAGGAGTGAA+CGG + chr7_4:20402624-20402643 Msa1144410:CDS 55.0%
TCCGTTCACTCCTTCAGCTG+TGG - chr7_4:20402628-20402647 None:intergenic 55.0%
GTCTCCCCTACTTCATCTCG+TGG + chr7_4:20401293-20401312 Msa1144410:CDS 55.0%
CTTCCTCACTTCCTTGCCTG+AGG + chr7_4:20401316-20401335 Msa1144410:CDS 55.0%
TTGCCTCAGGCAAGGAAGTG+AGG - chr7_4:20401322-20401341 None:intergenic 55.0%
TCAAAGCTCCCCCTCCGTTA+TGG + chr7_4:20401661-20401680 Msa1144410:CDS 55.0%
! ACTCGCCAACCATAACGGAG+GGG - chr7_4:20401673-20401692 None:intergenic 55.0%
! CACTCGCCAACCATAACGGA+GGG - chr7_4:20401674-20401693 None:intergenic 55.0%
TCACTCGCCAACCATAACGG+AGG - chr7_4:20401675-20401694 None:intergenic 55.0%
ACGAGCCATCTAGGTGACTC+GGG - chr7_4:20401754-20401773 None:intergenic 55.0%
ACCTAGATGGCTCGTTGCCA+AGG + chr7_4:20401759-20401778 Msa1144410:CDS 55.0%
CCTAGATGGCTCGTTGCCAA+GGG + chr7_4:20401760-20401779 Msa1144410:CDS 55.0%
CTCGTTGCCAAGGGTCGATT+AGG + chr7_4:20401769-20401788 Msa1144410:CDS 55.0%
CGTTGCCAAGGGTCGATTAG+GGG + chr7_4:20401771-20401790 Msa1144410:CDS 55.0%
AAGTCGTCGTCGCAGTCCAA+GGG - chr7_4:20401883-20401902 None:intergenic 55.0%
AAAGTCGTCGTCGCAGTCCA+AGG - chr7_4:20401884-20401903 None:intergenic 55.0%
CCTTGAGCTCGAAGCCTCAA+CGG - chr7_4:20402378-20402397 None:intergenic 55.0%
CGAGCTCAAGGCGTGTCTAT+TGG + chr7_4:20402387-20402406 Msa1144410:CDS 55.0%
GTGGTGAATAGGGTCACGAG+CGG + chr7_4:20402414-20402433 Msa1144410:CDS 55.0%
TGGTGAATAGGGTCACGAGC+GGG + chr7_4:20402415-20402434 Msa1144410:CDS 55.0%
!! CAATGGTGATGGCCTTGGAC+AGG - chr7_4:20402464-20402483 None:intergenic 55.0%
CTGTCCAAGGCCATCACCAT+TGG + chr7_4:20402462-20402481 Msa1144410:CDS 55.0%
TCCAAGGCCATCACCATTGG+TGG + chr7_4:20402465-20402484 Msa1144410:CDS 55.0%
CCAAGGCCATCACCATTGGT+GGG + chr7_4:20402466-20402485 Msa1144410:CDS 55.0%
CAAGGCCATCACCATTGGTG+GGG + chr7_4:20402467-20402486 Msa1144410:CDS 55.0%
GAAAGCCCCACCAATGGTGA+TGG - chr7_4:20402475-20402494 None:intergenic 55.0%
! CGGGCATTGCAATTGTCGCA+TGG + chr7_4:20402505-20402524 Msa1144410:CDS 55.0%
!!! TCAGCTGTGGCACTGGCTTT+TGG - chr7_4:20402615-20402634 None:intergenic 55.0%
AAAGCCAGTGCCACAGCTGA+AGG + chr7_4:20402615-20402634 Msa1144410:CDS 55.0%
GCCACAGCTGAAGGAGTGAA+CGG + chr7_4:20402624-20402643 Msa1144410:CDS 55.0%
TCCGTTCACTCCTTCAGCTG+TGG - chr7_4:20402628-20402647 None:intergenic 55.0%
AGCTCCCCCTCCGTTATGGT+TGG + chr7_4:20401665-20401684 Msa1144410:CDS 60.0%
! CTCGCCAACCATAACGGAGG+GGG - chr7_4:20401672-20401691 None:intergenic 60.0%
! CCATCTAGGTGACTCGGGCA+TGG - chr7_4:20401749-20401768 None:intergenic 60.0%
CCATGCCCGAGTCACCTAGA+TGG + chr7_4:20401746-20401765 Msa1144410:CDS 60.0%
CCCTTGGCAACGAGCCATCT+AGG - chr7_4:20401763-20401782 None:intergenic 60.0%
GGCTTCCCCTAATCGACCCT+TGG - chr7_4:20401779-20401798 None:intergenic 60.0%
AGTCGTCGTCGCAGTCCAAG+GGG - chr7_4:20401882-20401901 None:intergenic 60.0%
CCGTTGAGGCTTCGAGCTCA+AGG + chr7_4:20402375-20402394 Msa1144410:CDS 60.0%
AGGCGTGTCTATTGGTGCGG+TGG + chr7_4:20402395-20402414 Msa1144410:CDS 60.0%
GGTGAATAGGGTCACGAGCG+GGG + chr7_4:20402416-20402435 Msa1144410:CDS 60.0%
!! CCCACCAATGGTGATGGCCT+TGG - chr7_4:20402469-20402488 None:intergenic 60.0%
CACTCCTTCAGCTGTGGCAC+TGG - chr7_4:20402622-20402641 None:intergenic 60.0%
AGCTCCCCCTCCGTTATGGT+TGG + chr7_4:20401665-20401684 Msa1144410:CDS 60.0%
! CTCGCCAACCATAACGGAGG+GGG - chr7_4:20401672-20401691 None:intergenic 60.0%
! CCATCTAGGTGACTCGGGCA+TGG - chr7_4:20401749-20401768 None:intergenic 60.0%
CCATGCCCGAGTCACCTAGA+TGG + chr7_4:20401746-20401765 Msa1144410:CDS 60.0%
CCCTTGGCAACGAGCCATCT+AGG - chr7_4:20401763-20401782 None:intergenic 60.0%
GGCTTCCCCTAATCGACCCT+TGG - chr7_4:20401779-20401798 None:intergenic 60.0%
AGTCGTCGTCGCAGTCCAAG+GGG - chr7_4:20401882-20401901 None:intergenic 60.0%
CCGTTGAGGCTTCGAGCTCA+AGG + chr7_4:20402375-20402394 Msa1144410:CDS 60.0%
AGGCGTGTCTATTGGTGCGG+TGG + chr7_4:20402395-20402414 Msa1144410:CDS 60.0%
GGTGAATAGGGTCACGAGCG+GGG + chr7_4:20402416-20402435 Msa1144410:CDS 60.0%
!! CCCACCAATGGTGATGGCCT+TGG - chr7_4:20402469-20402488 None:intergenic 60.0%
CACTCCTTCAGCTGTGGCAC+TGG - chr7_4:20402622-20402641 None:intergenic 60.0%
ACAACACGCGCCTCCCAACG+CGG - chr7_4:20402167-20402186 None:intergenic 65.0%
ACAACACGCGCCTCCCAACG+CGG - chr7_4:20402167-20402186 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 20400501 20402695 20400501 ID=Msa1144410;Name=Msa1144410
chr7_4 mRNA 20400501 20402695 20400501 ID=Msa1144410-mRNA-1;Parent=Msa1144410;Name=Msa1144410-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|520
chr7_4 exon 20400501 20400630 20400501 ID=Msa1144410-mRNA-1:exon:4894;Parent=Msa1144410-mRNA-1
chr7_4 exon 20400991 20401337 20400991 ID=Msa1144410-mRNA-1:exon:4895;Parent=Msa1144410-mRNA-1
chr7_4 exon 20401610 20402695 20401610 ID=Msa1144410-mRNA-1:exon:4896;Parent=Msa1144410-mRNA-1
chr7_4 CDS 20400501 20400630 20400501 ID=Msa1144410-mRNA-1:cds;Parent=Msa1144410-mRNA-1
chr7_4 CDS 20400991 20401337 20400991 ID=Msa1144410-mRNA-1:cds;Parent=Msa1144410-mRNA-1
chr7_4 CDS 20401610 20402695 20401610 ID=Msa1144410-mRNA-1:cds;Parent=Msa1144410-mRNA-1
Gene Sequence

>Msa1144410

ATGGCTGAGGGAGAAGCAACAGTTCTGAAATCTCTTGAGGATTTTGGTCCTCAAAAGAAGCCCAAAAGGAACAAGTTTGCTTGTGCTTGTGCTATCTTGGCTTCTATGACTTCCATCCTACTTGGATATGATATTGGTGTGATGAGTGGAGCAGCCATCTATATAAAAAGAGACCTTAAAGTAACGGACGTACAAATTGAAGTTCTCCTAGGTATCATAAACCTATATTCTCCCATAGGTTCTTACATTGCAGGGAGACTTTCTGACTGGATTGGTCGACGTTACACGATTGTTCTTGCCGGTTTGATTTTCTTCGTTGGAGCTGTACTTATGGGACTTTCTCCAAACTACGCATTTCTCATGTTTGGTCGTTTCTTTGCTGGTGTTGGCATAGGGTTTGCCTTCTTGATTGCTCCTGTTTATACATCTGAAGTCTCCCCTACTTCATCTCGTGGCTTCCTCACTTCCTTGCCTGAGGTATTTCTGAATGGAGGGATTTTAGTAGGATACATTTCAAACTATGGATTTTCAAAGCTCCCCCTCCGTTATGGTTGGCGAGTGATGCTTGGAATCGGTGCCATCCCTTCTGTAATCCTAGCTATGGCCGTATTAGCCATGCCCGAGTCACCTAGATGGCTCGTTGCCAAGGGTCGATTAGGGGAAGCCAAAAAAGTTCTTTATAAAATATCTGATTCTAAAGAAGAGGCTCAGCTAAGACTAGCCGATATTAAAGAGATAACAGGGATCCCCTTGGACTGCGACGACGACTTTGTTTCAGTCACAAAAGTTCAAGGCAAAGGCGTATGGAAAGAACTATTTCTTCATCCTACACCTGCAGTTCGTCACATCTTTATTGCCTCCCTCGGGATTCACTTCTTTGCACAAGCCACTGGCATAGACGCTGTTGTTTTGTATAGTCCCAGAATCTTTGAGAAGGCTGGGATCAAATCCGACACAAATAAGCTTCTCGCAACTGTAGCTGTTGGATTTGTGAAAACAGTGTTCGTCTTAGTGGCCACTTTTTTATTAGACCGCGTTGGGAGGCGCGTGTTGTTGTTAACCAGTGTAGGTGGGTTAATAATCTCACTTCTGACATTGGCGATTAGTCTCACTATTATTGATAATTCAAACGCCACACTGACATGGGCTATTTCGCTTAGTATAGCAGCAGTGTTATCCTATGCAGCTACTTTCTCAATAGGATCAGGTCCAATTACGTGGGTTTATAGTTCTGAAATATTTCCGTTGAGGCTTCGAGCTCAAGGCGTGTCTATTGGTGCGGTGGTGAATAGGGTCACGAGCGGGGTCATCTCCATGACTTTTCTGTCCCTGTCCAAGGCCATCACCATTGGTGGGGCTTTCTTTCTTTTTGCGGGCATTGCAATTGTCGCATGGATCTTTCACTACACTATGCTCCCTGAAACACAAGGCAAAACATTGGAGGAAATAGAAGGGTCCTTTGGTAATCTATGGAGGAAACCAAAAGCCAGTGCCACAGCTGAAGGAGTGAACGGAAAAATCCAGTTAAGCACCAATGACAAGACTTTTACAACTACGGAATAG
Protein sequence

>Msa1144410

MAEGEATVLKSLEDFGPQKKPKRNKFACACAILASMTSILLGYDIGVMSGAAIYIKRDLKVTDVQIEVLLGIINLYSPIGSYIAGRLSDWIGRRYTIVLAGLIFFVGAVLMGLSPNYAFLMFGRFFAGVGIGFAFLIAPVYTSEVSPTSSRGFLTSLPEVFLNGGILVGYISNYGFSKLPLRYGWRVMLGIGAIPSVILAMAVLAMPESPRWLVAKGRLGEAKKVLYKISDSKEEAQLRLADIKEITGIPLDCDDDFVSVTKVQGKGVWKELFLHPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDTNKLLATVAVGFVKTVFVLVATFLLDRVGRRVLLLTSVGGLIISLLTLAISLTIIDNSNATLTWAISLSIAAVLSYAATFSIGSGPITWVYSSEIFPLRLRAQGVSIGAVVNRVTSGVISMTFLSLSKAITIGGAFFLFAGIAIVAWIFHYTMLPETQGKTLEEIEGSFGNLWRKPKASATAEGVNGKIQLSTNDKTFTTTE*