Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145910 | XP_027188262.1 | 70.085 | 234 | 54 | 1 | 42 | 259 | 63 | 296 | 4.99e-104 | 314 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145910 | A0A3Q7Y8W2 | 70.085 | 234 | 54 | 1 | 42 | 259 | 63 | 296 | 2.38e-104 | 314 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0432320 | Msa1145910 | 0.800540 | 1.373595e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145910 | MtrunA17_Chr8g0334821 | 30.075 | 266 | 136 | 9 | 41 | 256 | 73 | 338 | 1.56e-28 | 113 |
| Msa1145910 | MtrunA17_Chr4g0069161 | 30.645 | 248 | 137 | 5 | 41 | 253 | 57 | 304 | 4.95e-28 | 108 |
| Msa1145910 | MtrunA17_Chr1g0166871 | 29.348 | 92 | 64 | 1 | 51 | 142 | 56 | 146 | 5.41e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145910 | AT3G17380.1 | 35.510 | 245 | 124 | 8 | 41 | 252 | 59 | 302 | 1.25e-33 | 124 |
| Msa1145910 | AT5G26280.1 | 28.514 | 249 | 142 | 5 | 41 | 255 | 98 | 344 | 6.62e-24 | 99.0 |
| Msa1145910 | AT5G26280.3 | 28.514 | 249 | 142 | 5 | 41 | 255 | 117 | 363 | 7.84e-24 | 99.0 |
| Msa1145910 | AT3G20370.2 | 29.435 | 248 | 138 | 7 | 41 | 253 | 104 | 349 | 8.46e-23 | 96.3 |
| Msa1145910 | AT3G20370.1 | 29.435 | 248 | 138 | 7 | 41 | 253 | 126 | 371 | 1.08e-22 | 96.3 |
| Msa1145910 | AT5G26260.1 | 26.423 | 246 | 149 | 4 | 42 | 255 | 100 | 345 | 2.53e-22 | 94.7 |
| Msa1145910 | AT3G28220.1 | 31.466 | 232 | 123 | 8 | 51 | 250 | 132 | 359 | 4.42e-22 | 94.4 |
| Msa1145910 | AT1G58270.1 | 29.915 | 234 | 127 | 7 | 50 | 251 | 146 | 374 | 7.27e-22 | 94.0 |
| Msa1145910 | AT5G26320.1 | 27.935 | 247 | 146 | 4 | 41 | 255 | 100 | 346 | 3.87e-21 | 91.3 |
| Msa1145910 | AT2G04170.4 | 26.778 | 239 | 139 | 4 | 51 | 255 | 56 | 292 | 1.01e-19 | 86.7 |
| Msa1145910 | AT2G04170.3 | 26.778 | 239 | 139 | 4 | 51 | 255 | 56 | 292 | 1.01e-19 | 86.7 |
| Msa1145910 | AT5G26290.1 | 28.629 | 248 | 136 | 7 | 41 | 255 | 91 | 330 | 1.91e-19 | 86.7 |
| Msa1145910 | AT5G26280.2 | 26.692 | 266 | 159 | 5 | 24 | 255 | 58 | 321 | 2.86e-19 | 85.9 |
| Msa1145910 | AT2G04170.6 | 26.778 | 239 | 139 | 4 | 51 | 255 | 138 | 374 | 3.27e-19 | 86.3 |
| Msa1145910 | AT2G04170.2 | 26.778 | 239 | 139 | 4 | 51 | 255 | 178 | 414 | 3.91e-19 | 86.3 |
| Msa1145910 | AT2G04170.1 | 26.778 | 239 | 139 | 4 | 51 | 255 | 178 | 414 | 3.91e-19 | 86.3 |
| Msa1145910 | AT2G04190.1 | 27.126 | 247 | 148 | 6 | 41 | 255 | 159 | 405 | 1.48e-18 | 84.7 |
| Msa1145910 | AT2G15710.1 | 29.302 | 215 | 128 | 6 | 42 | 232 | 136 | 350 | 2.98e-18 | 83.6 |
| Msa1145910 | AT5G26300.1 | 26.908 | 249 | 145 | 6 | 41 | 255 | 98 | 343 | 1.21e-17 | 81.6 |
| Msa1145910 | AT3G22080.1 | 26.939 | 245 | 143 | 8 | 42 | 253 | 63 | 304 | 2.78e-17 | 80.1 |
| Msa1145910 | AT3G20380.1 | 26.050 | 238 | 147 | 4 | 41 | 249 | 126 | 363 | 7.11e-17 | 79.7 |
| Msa1145910 | AT2G04170.5 | 31.847 | 157 | 89 | 3 | 51 | 191 | 178 | 332 | 1.35e-16 | 79.0 |
| Msa1145910 | AT3G20360.1 | 26.337 | 243 | 143 | 6 | 42 | 248 | 108 | 350 | 1.84e-16 | 78.6 |
| Msa1145910 | AT2G04170.7 | 33.582 | 134 | 86 | 2 | 51 | 183 | 178 | 309 | 3.79e-16 | 77.0 |
| Msa1145910 | AT1G65370.1 | 25.641 | 234 | 127 | 7 | 54 | 253 | 1 | 221 | 1.59e-14 | 71.2 |
| Msa1145910 | AT1G69660.1 | 31.126 | 151 | 88 | 4 | 69 | 203 | 8 | 158 | 9.86e-14 | 68.9 |
| Msa1145910 | AT4G09770.2 | 25.514 | 243 | 143 | 7 | 42 | 251 | 49 | 286 | 4.22e-13 | 68.2 |
| Msa1145910 | AT4G09770.1 | 25.514 | 243 | 143 | 7 | 42 | 251 | 49 | 286 | 4.22e-13 | 68.2 |
| Msa1145910 | AT4G09780.2 | 25.714 | 245 | 145 | 7 | 42 | 253 | 102 | 342 | 4.65e-13 | 68.9 |
| Msa1145910 | AT4G09770.4 | 25.514 | 243 | 143 | 7 | 42 | 251 | 75 | 312 | 5.52e-13 | 68.2 |
| Msa1145910 | AT4G09770.5 | 29.577 | 142 | 94 | 3 | 42 | 182 | 75 | 211 | 8.57e-13 | 67.0 |
| Msa1145910 | AT4G09770.3 | 29.577 | 142 | 94 | 3 | 42 | 182 | 49 | 185 | 9.25e-13 | 66.6 |
| Msa1145910 | AT1G65150.2 | 26.923 | 234 | 139 | 7 | 42 | 249 | 54 | 281 | 9.59e-13 | 67.0 |
| Msa1145910 | AT1G65150.1 | 26.923 | 234 | 139 | 7 | 42 | 249 | 54 | 281 | 9.59e-13 | 67.0 |
| Msa1145910 | AT4G09780.1 | 24.219 | 256 | 146 | 7 | 42 | 253 | 102 | 353 | 1.01e-11 | 64.7 |
| Msa1145910 | AT2G25330.1 | 26.316 | 190 | 99 | 3 | 105 | 254 | 309 | 497 | 5.66e-11 | 62.8 |
Find 53 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCAATAGGTAATGAAAT+TGG | 0.139287 | 7_4:-22856860 | None:intergenic |
| TGGCCACGTTTCTATTTATT+TGG | 0.172284 | 7_4:+22856826 | Msa1145910:CDS |
| AAACCTGAATAATGGAATTT+TGG | 0.176793 | 7_4:+22861802 | Msa1145910:CDS |
| TCACCAAAATTCCATTATTC+AGG | 0.230359 | 7_4:-22861805 | None:intergenic |
| GGATAAGCAATCGCCTTTAT+TGG | 0.263509 | 7_4:-22857442 | None:intergenic |
| GTCCTTCTCATTGCTTTCTA+AGG | 0.273294 | 7_4:+22856545 | Msa1145910:CDS |
| AATAGTGACAGGATTTATTA+TGG | 0.278861 | 7_4:-22857463 | None:intergenic |
| GTGTCAATGCTGATGAAATT+TGG | 0.280675 | 7_4:-22857342 | None:intergenic |
| CGACTCCATTGGGGTATAAA+AGG | 0.287642 | 7_4:-22857671 | None:intergenic |
| TTCTATTTATTTGGCAATCA+TGG | 0.321583 | 7_4:+22856835 | Msa1145910:CDS |
| CAATTTCATTACCTATTGAT+TGG | 0.338977 | 7_4:+22856861 | Msa1145910:CDS |
| ATATGCTGAAAAGTTTATAA+TGG | 0.340449 | 7_4:-22856894 | None:intergenic |
| TTTCCCTCAACGACTCCATT+GGG | 0.382967 | 7_4:-22857681 | None:intergenic |
| ATTTGCAAAATTTCCAGCTA+TGG | 0.388409 | 7_4:-22857488 | None:intergenic |
| CTTTCCCTCAACGACTCCAT+TGG | 0.417745 | 7_4:-22857682 | None:intergenic |
| AATTTCATTACCTATTGATT+GGG | 0.420880 | 7_4:+22856862 | Msa1145910:CDS |
| AGTCAATGTCACAAGTTGTC+TGG | 0.424431 | 7_4:-22861771 | None:intergenic |
| AATCAATAGGTAATGAAATT+GGG | 0.431396 | 7_4:-22856859 | None:intergenic |
| CTGTCACTATTTCCCATAGC+TGG | 0.438547 | 7_4:+22857475 | Msa1145910:CDS |
| TTTGCAAAATTTCCAGCTAT+GGG | 0.446728 | 7_4:-22857487 | None:intergenic |
| CCCTACAAAAGGATATTTGT+TGG | 0.450408 | 7_4:+22857374 | Msa1145910:CDS |
| GCATTGATCTCCCAATCAAT+AGG | 0.467061 | 7_4:-22856872 | None:intergenic |
| ACCTCCAGCTTCAAACTCTT+CGG | 0.467371 | 7_4:-22856589 | None:intergenic |
| TACCCCAATGGAGTCGTTGA+GGG | 0.484655 | 7_4:+22857678 | Msa1145910:CDS |
| CAATGGAGTCGTTGAGGGAA+AGG | 0.485272 | 7_4:+22857683 | Msa1145910:CDS |
| GTTGTGAAGACTGCCAATAA+AGG | 0.497899 | 7_4:+22857429 | Msa1145910:CDS |
| CTCCAGCTCAGATTTAGTGT+GGG | 0.503286 | 7_4:+22861745 | Msa1145910:CDS |
| CAGCTATGGGAAATAGTGAC+AGG | 0.505924 | 7_4:-22857474 | None:intergenic |
| TTGAAGCTGGAGGTTACAAA+TGG | 0.507558 | 7_4:+22856598 | Msa1145910:CDS |
| TCCAGCTCAGATTTAGTGTG+GGG | 0.530661 | 7_4:+22861746 | Msa1145910:CDS |
| AACATGCAGATGCATCTGTT+AGG | 0.533883 | 7_4:+22857286 | Msa1145910:intron |
| ATATTAAATATTGTAACGAC+GGG | 0.534511 | 7_4:+22861985 | Msa1145910:three_prime_UTR |
| GTCTCCGAAGAGTTTGAAGC+TGG | 0.538769 | 7_4:+22856585 | Msa1145910:CDS |
| ACATTTAAAGACCCTACAAA+AGG | 0.540200 | 7_4:+22857363 | Msa1145910:CDS |
| AATGGAGTCGTTGAGGGAAA+GGG | 0.546147 | 7_4:+22857684 | Msa1145910:CDS |
| TCATGTCCTGAAAACAGAGT+GGG | 0.562047 | 7_4:+22857314 | Msa1145910:CDS |
| AATATTAAATATTGTAACGA+CGG | 0.562920 | 7_4:+22861984 | Msa1145910:three_prime_UTR |
| TTGAATGTGTAATGACTTGG+CGG | 0.569734 | 7_4:-22856516 | None:intergenic |
| TCTCCAGCTCAGATTTAGTG+TGG | 0.572456 | 7_4:+22861744 | Msa1145910:CDS |
| GGCCTTAGAAAGCAATGAGA+AGG | 0.586914 | 7_4:-22856547 | None:intergenic |
| ATACCCCAATGGAGTCGTTG+AGG | 0.601714 | 7_4:+22857677 | Msa1145910:CDS |
| TCCGAAGAGTTTGAAGCTGG+AGG | 0.602578 | 7_4:+22856588 | Msa1145910:CDS |
| GATGAATACGTTACAACTCA+AGG | 0.603967 | 7_4:+22856929 | Msa1145910:CDS |
| TTCCCTCAACGACTCCATTG+GGG | 0.610483 | 7_4:-22857680 | None:intergenic |
| CCAGCTCAGATTTAGTGTGG+GGG | 0.626962 | 7_4:+22861747 | Msa1145910:CDS |
| TCAGGGAACACAGAGAGGCA+TGG | 0.628954 | 7_4:+22856800 | Msa1145910:intron |
| CACCCCGAAAATGATTGATG+TGG | 0.637274 | 7_4:+22861876 | Msa1145910:exon |
| TTCATGTCCTGAAAACAGAG+TGG | 0.637299 | 7_4:+22857313 | Msa1145910:CDS |
| AACACAGAGAGGCATGGACA+TGG | 0.640631 | 7_4:+22856806 | Msa1145910:CDS |
| GATGATACATGCATTAAATG+AGG | 0.645294 | 7_4:+22861898 | Msa1145910:three_prime_UTR |
| ACCCATCAGGGAACACAGAG+AGG | 0.659856 | 7_4:+22856795 | Msa1145910:intron |
| CATGTCCTGAAAACAGAGTG+GGG | 0.661266 | 7_4:+22857315 | Msa1145910:CDS |
| TTGCCAAATAAATAGAAACG+TGG | 0.730686 | 7_4:-22856829 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTATGATATAAATTTTA+AGG | + | chr7_4:22857004-22857023 | Msa1145910:intron | 10.0% |
| !!! | TAATTTTTTAATATCTTTTC+AGG | + | chr7_4:22857205-22857224 | Msa1145910:intron | 10.0% |
| !!! | GAATTTTTTATTTTTTTTTG+AGG | + | chr7_4:22858213-22858232 | Msa1145910:intron | 10.0% |
| !!! | TAACAAAAAAAATCATTTTA+TGG | - | chr7_4:22859450-22859469 | None:intergenic | 10.0% |
| !! | AGAATAATAACATAAAATTA+AGG | - | chr7_4:22859772-22859791 | None:intergenic | 10.0% |
| !! | AATGAATTTAGTTATTTATT+AGG | + | chr7_4:22862064-22862083 | Msa1145910:intron | 10.0% |
| !!! | TAACAAAAAAAATCATTTTA+TGG | - | chr7_4:22859450-22859469 | None:intergenic | 10.0% |
| !!! | TGATTTTTTTTTTCTTAAAA+AGG | + | chr7_4:22862639-22862658 | Msa1145910:intron | 10.0% |
| !! | AGAATAATAACATAAAATTA+AGG | - | chr7_4:22859772-22859791 | None:intergenic | 10.0% |
| !!! | GAAAATATAATTTTGATTTT+AGG | + | chr7_4:22863096-22863115 | Msa1145910:intron | 10.0% |
| !!! | ATTTATTATAAACCAATTTT+TGG | - | chr7_4:22863184-22863203 | None:intergenic | 10.0% |
| !!! | TTTATATTGATATCTTTTAC+AGG | + | chr7_4:22856483-22856502 | Msa1145910:intron | 15.0% |
| !!! | TATGATATAAATTTTAAGGT+TGG | + | chr7_4:22857008-22857027 | Msa1145910:intron | 15.0% |
| !! | TTATAATGTAGTATAAGATA+AGG | - | chr7_4:22857255-22857274 | None:intergenic | 15.0% |
| !! | AGCTAAAAATAATGAAATAT+GGG | - | chr7_4:22857712-22857731 | None:intergenic | 15.0% |
| !! | AAAAGATACATTTGATTATT+TGG | + | chr7_4:22858148-22858167 | Msa1145910:intron | 15.0% |
| !!! | AAGTTGAATTTTTAGTTATT+GGG | + | chr7_4:22859022-22859041 | Msa1145910:intron | 15.0% |
| !! | AAGTAATGTTAATATTTCAT+TGG | - | chr7_4:22859174-22859193 | None:intergenic | 15.0% |
| !! | TAAATAGTTAAGGATATAAT+AGG | - | chr7_4:22859199-22859218 | None:intergenic | 15.0% |
| !! | AAATGTAATTAATATTGTGT+GGG | - | chr7_4:22859310-22859329 | None:intergenic | 15.0% |
| !!! | ATGTATTTTCCAAAAAAAAA+AGG | + | chr7_4:22859686-22859705 | Msa1145910:intron | 15.0% |
| !!! | CAATAAAAACCTTTTTTTTT+TGG | - | chr7_4:22859698-22859717 | None:intergenic | 15.0% |
| !!! | AAAAAAAAGGTTTTTATTGA+TGG | + | chr7_4:22859699-22859718 | Msa1145910:intron | 15.0% |
| !!! | ATTTTTCATATATACATGTT+GGG | - | chr7_4:22859978-22859997 | None:intergenic | 15.0% |
| !! | ACATAAAAAACAACAAAATA+TGG | + | chr7_4:22860011-22860030 | Msa1145910:intron | 15.0% |
| !! | ATAACAAATTAAACAACAAT+GGG | + | chr7_4:22860305-22860324 | Msa1145910:intron | 15.0% |
| !! | ATACTTTAACTATAGATATT+TGG | + | chr7_4:22860354-22860373 | Msa1145910:intron | 15.0% |
| !! | ATATAAAAAATTGATACAAC+TGG | + | chr7_4:22860740-22860759 | Msa1145910:intron | 15.0% |
| !! | AACTTTAAATAATATGAAAC+TGG | + | chr7_4:22860876-22860895 | Msa1145910:intron | 15.0% |
| !! | ACTTTAAATAATATGAAACT+GGG | + | chr7_4:22860877-22860896 | Msa1145910:intron | 15.0% |
| !! | AATATTAAATATTGTAACGA+CGG | + | chr7_4:22861984-22862003 | Msa1145910:three_prime_UTR | 15.0% |
| !! | AAATTGTTTGTGATATTATT+TGG | + | chr7_4:22862112-22862131 | Msa1145910:intron | 15.0% |
| !! | AATTGTTTGTGATATTATTT+GGG | + | chr7_4:22862113-22862132 | Msa1145910:intron | 15.0% |
| !!! | CAAAAATAGATTTTTTAAAG+AGG | - | chr7_4:22862516-22862535 | None:intergenic | 15.0% |
| !! | CTTAAAAAGGTTATATTAAA+CGG | + | chr7_4:22859646-22859665 | Msa1145910:intron | 15.0% |
| !! | TTAAAAAGGTTATATTAAAC+GGG | + | chr7_4:22859647-22859666 | Msa1145910:intron | 15.0% |
| !!! | ATGTATTTTCCAAAAAAAAT+AGG | + | chr7_4:22862693-22862712 | Msa1145910:intron | 15.0% |
| !!! | CAATAAATTCCTATTTTTTT+TGG | - | chr7_4:22862705-22862724 | None:intergenic | 15.0% |
| !! | TTTATTGATGAATTAAAATG+AGG | + | chr7_4:22862718-22862737 | Msa1145910:intron | 15.0% |
| !! | TTATTGATGAATTAAAATGA+GGG | + | chr7_4:22862719-22862738 | Msa1145910:intron | 15.0% |
| !! | AATGGAAAAAAAAATAATCA+TGG | + | chr7_4:22863063-22863082 | Msa1145910:intron | 15.0% |
| !!! | TTTTAGGAATAAATTCAAAT+AGG | + | chr7_4:22863112-22863131 | Msa1145910:intron | 15.0% |
| !! | AGATTAGATACATTAAAAGA+AGG | + | chr7_4:22856420-22856439 | Msa1145910:intron | 20.0% |
| !! | AATGGTATGTAAATGTATTT+AGG | + | chr7_4:22856616-22856635 | Msa1145910:intron | 20.0% |
| !! | AATCAATAGGTAATGAAATT+GGG | - | chr7_4:22856862-22856881 | None:intergenic | 20.0% |
| !!! | AATTTCATTACCTATTGATT+GGG | + | chr7_4:22856862-22856881 | Msa1145910:CDS | 20.0% |
| !! | ATATGCTGAAAAGTTTATAA+TGG | - | chr7_4:22856897-22856916 | None:intergenic | 20.0% |
| !! | ATGATATTTAATCACTAACT+TGG | - | chr7_4:22857121-22857140 | None:intergenic | 20.0% |
| !! | GAGCTAAAAATAATGAAATA+TGG | - | chr7_4:22857713-22857732 | None:intergenic | 20.0% |
| !!! | TATTTCATTATTTTTAGCTC+TGG | + | chr7_4:22857713-22857732 | Msa1145910:CDS | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | - | chr7_4:22857916-22857935 | None:intergenic | 20.0% |
| !! | AAAAATTAAGAGATTATCAC+AGG | - | chr7_4:22858062-22858081 | None:intergenic | 20.0% |
| !! | TGATAGTAATTCAATATGAT+GGG | - | chr7_4:22858116-22858135 | None:intergenic | 20.0% |
| !! | ATGATAGTAATTCAATATGA+TGG | - | chr7_4:22858117-22858136 | None:intergenic | 20.0% |
| !! | ATTGAATTACTATCATACAT+TGG | + | chr7_4:22858121-22858140 | Msa1145910:intron | 20.0% |
| !! | GATACATTTGATTAAGAAAT+AGG | + | chr7_4:22858186-22858205 | Msa1145910:intron | 20.0% |
| !!! | ATTTTTTTTTGAGGGAAAAT+AGG | + | chr7_4:22858222-22858241 | Msa1145910:intron | 20.0% |
| !!! | TAGAAAACATAACAAGTTTT+AGG | - | chr7_4:22858796-22858815 | None:intergenic | 20.0% |
| !!! | GAGTTAAAATGACAAATTTT+AGG | - | chr7_4:22858869-22858888 | None:intergenic | 20.0% |
| !!! | GAAGTTGAATTTTTAGTTAT+TGG | + | chr7_4:22859021-22859040 | Msa1145910:intron | 20.0% |
| !! | TCTTTCACATATCATTTATT+AGG | + | chr7_4:22859250-22859269 | Msa1145910:intron | 20.0% |
| !! | CTTTCACATATCATTTATTA+GGG | + | chr7_4:22859251-22859270 | Msa1145910:intron | 20.0% |
| !! | GAAATGTAATTAATATTGTG+TGG | - | chr7_4:22859311-22859330 | None:intergenic | 20.0% |
| !!! | CTCAAAAATAGATTTTTTAG+AGG | - | chr7_4:22859515-22859534 | None:intergenic | 20.0% |
| !!! | GTGATTTTTTTTCCTTAAAA+AGG | + | chr7_4:22859633-22859652 | Msa1145910:intron | 20.0% |
| !!! | CGTTTAATATAACCTTTTTA+AGG | - | chr7_4:22859648-22859667 | None:intergenic | 20.0% |
| !!! | TTTATTGATGGATTAAAATG+AGG | + | chr7_4:22859711-22859730 | Msa1145910:intron | 20.0% |
| !!! | TTATTGATGGATTAAAATGA+GGG | + | chr7_4:22859712-22859731 | Msa1145910:intron | 20.0% |
| !!! | AAATTAAGGAAGTAGATTTT+CGG | - | chr7_4:22859758-22859777 | None:intergenic | 20.0% |
| !!! | CATTTTTCATATATACATGT+TGG | - | chr7_4:22859979-22859998 | None:intergenic | 20.0% |
| !! | ATGTATATATGAAAAATGCA+TGG | + | chr7_4:22859981-22860000 | Msa1145910:intron | 20.0% |
| !! | CATAACAAATTAAACAACAA+TGG | + | chr7_4:22860304-22860323 | Msa1145910:intron | 20.0% |
| !! | GGAATTTATAAAAAAAAGCT+AGG | + | chr7_4:22860422-22860441 | Msa1145910:intron | 20.0% |
| !! | ATTGCAACAGAAAAAATTTA+TGG | - | chr7_4:22860667-22860686 | None:intergenic | 20.0% |
| !!! | AAACTATACAATTTCTTTTG+TGG | + | chr7_4:22860836-22860855 | Msa1145910:intron | 20.0% |
| !!! | GTATTTATTTCTCTATCTTA+TGG | - | chr7_4:22861116-22861135 | None:intergenic | 20.0% |
| !!! | TAGAAAACATAACAAGTTTT+AGG | - | chr7_4:22858796-22858815 | None:intergenic | 20.0% |
| !!! | GAGTTAAAATGACAAATTTT+AGG | - | chr7_4:22858869-22858888 | None:intergenic | 20.0% |
| !! | ATATTAAATATTGTAACGAC+GGG | + | chr7_4:22861985-22862004 | Msa1145910:three_prime_UTR | 20.0% |
| !! | ATTGTTTGTGATATTATTTG+GGG | + | chr7_4:22862114-22862133 | Msa1145910:intron | 20.0% |
| !!! | AAATTAAGGAAGTAGATTTT+CGG | - | chr7_4:22859758-22859777 | None:intergenic | 20.0% |
| !! | AAACAATAGTTAAAAAACTG+AGG | + | chr7_4:22862800-22862819 | Msa1145910:intron | 20.0% |
| !! | GTTATTTGCAATAATGTAAA+TGG | + | chr7_4:22863045-22863064 | Msa1145910:intron | 20.0% |
| !! | TGGTTTATAATAAATTGTGA+TGG | + | chr7_4:22863189-22863208 | Msa1145910:intron | 20.0% |
| ! | TTATATGAATCACCTTTCAT+GGG | - | chr7_4:22856221-22856240 | None:intergenic | 25.0% |
| ! | TTTATATGAATCACCTTTCA+TGG | - | chr7_4:22856222-22856241 | None:intergenic | 25.0% |
| ! | TGATTCATATAAACAACAGT+TGG | + | chr7_4:22856229-22856248 | Msa1145910:intron | 25.0% |
| !! | CTTTTCCGATTTAGTATTTA+GGG | - | chr7_4:22856373-22856392 | None:intergenic | 25.0% |
| !! | ACTTTTCCGATTTAGTATTT+AGG | - | chr7_4:22856374-22856393 | None:intergenic | 25.0% |
| ! | TTAGATACATTAAAAGAAGG+TGG | + | chr7_4:22856423-22856442 | Msa1145910:intron | 25.0% |
| !! | TATTGATATCTTTTACAGGA+AGG | + | chr7_4:22856487-22856506 | Msa1145910:intron | 25.0% |
| !! | ATTTTGAATGTGTAATGACT+TGG | - | chr7_4:22856522-22856541 | None:intergenic | 25.0% |
| ! | TGTATTTAGGCCTTAAATAA+TGG | + | chr7_4:22856629-22856648 | Msa1145910:intron | 25.0% |
| ! | TTCTATTTATTTGGCAATCA+TGG | + | chr7_4:22856835-22856854 | Msa1145910:CDS | 25.0% |
| ! | CAATCAATAGGTAATGAAAT+TGG | - | chr7_4:22856863-22856882 | None:intergenic | 25.0% |
| ! | CAATTTCATTACCTATTGAT+TGG | + | chr7_4:22856861-22856880 | Msa1145910:CDS | 25.0% |
| ! | GTTATATATTCTGTTAGGTT+TGG | + | chr7_4:22857030-22857049 | Msa1145910:intron | 25.0% |
| !!! | TTGACATGAGCTATTTTATA+GGG | + | chr7_4:22857160-22857179 | Msa1145910:intron | 25.0% |
| !! | TTGGATGATAATTGTGTTTT+TGG | + | chr7_4:22857393-22857412 | Msa1145910:CDS | 25.0% |
| ! | AATAGTGACAGGATTTATTA+TGG | - | chr7_4:22857466-22857485 | None:intergenic | 25.0% |
| !! | GTAACAAATTTTATGTTCTC+TGG | + | chr7_4:22857626-22857645 | Msa1145910:intron | 25.0% |
| !! | GAATGCTTTGAATATACTAA+TGG | - | chr7_4:22858308-22858327 | None:intergenic | 25.0% |
| ! | AGAAGAACATAATGTCATAT+CGG | + | chr7_4:22858591-22858610 | Msa1145910:intron | 25.0% |
| !! | AATCAACAACTTCTTTTTAG+AGG | - | chr7_4:22858834-22858853 | None:intergenic | 25.0% |
| ! | AAACTCAAAAACCTGAATAA+TGG | + | chr7_4:22858970-22858989 | Msa1145910:intron | 25.0% |
| !!! | AAACCTGAATAATGGAATTT+TGG | + | chr7_4:22858978-22858997 | Msa1145910:intron | 25.0% |
| ! | GAGAGAGTAATAAATAGTTA+AGG | - | chr7_4:22859209-22859228 | None:intergenic | 25.0% |
| ! | AAACAACAGTTAAAAAACTG+AGG | + | chr7_4:22859793-22859812 | Msa1145910:intron | 25.0% |
| ! | CCAAAGTTACATTAAGAAAA+GGG | - | chr7_4:22860190-22860209 | None:intergenic | 25.0% |
| ! | TCCAAAGTTACATTAAGAAA+AGG | - | chr7_4:22860191-22860210 | None:intergenic | 25.0% |
| ! | ATGACCATTAATAAAAGTCA+GGG | - | chr7_4:22860287-22860306 | None:intergenic | 25.0% |
| ! | TATGACCATTAATAAAAGTC+AGG | - | chr7_4:22860288-22860307 | None:intergenic | 25.0% |
| ! | ATATTTGGCAATGATTATGA+GGG | + | chr7_4:22860369-22860388 | Msa1145910:intron | 25.0% |
| !! | CAATATAATAGTGTGCATTT+TGG | + | chr7_4:22860533-22860552 | Msa1145910:intron | 25.0% |
| ! | TTAAATAATATGAAACTGGG+AGG | + | chr7_4:22860880-22860899 | Msa1145910:intron | 25.0% |
| !! | TTATCTGCACTATTTTATGA+AGG | - | chr7_4:22861035-22861054 | None:intergenic | 25.0% |
| ! | AGTATTTCATCACTTCTATA+TGG | - | chr7_4:22861069-22861088 | None:intergenic | 25.0% |
| !! | AATCAACAACTTCTTTTTAG+AGG | - | chr7_4:22858834-22858853 | None:intergenic | 25.0% |
| ! | AAACTCAAAAACCTGAATAA+TGG | + | chr7_4:22858970-22858989 | Msa1145910:intron | 25.0% |
| !!! | AAACCTGAATAATGGAATTT+TGG | + | chr7_4:22858978-22858997 | Msa1145910:intron | 25.0% |
| ! | CTAATAATATGACTAAGAGA+TGG | + | chr7_4:22862338-22862357 | Msa1145910:intron | 25.0% |
| !!! | ATCATCATTTTATTTTGCTC+AGG | + | chr7_4:22862363-22862382 | Msa1145910:intron | 25.0% |
| !!! | CATCACAACTTTTTTTTTCA+GGG | - | chr7_4:22863221-22863240 | None:intergenic | 25.0% |
| !!! | ACGATCTTTAACTTTTTTGA+CGG | + | chr7_4:22863307-22863326 | Msa1145910:intron | 25.0% |
| TTCAGAAAACTATCTCTAGT+TGG | + | chr7_4:22856339-22856358 | Msa1145910:intron | 30.0% | |
| TTCTTGCTGACCATTATTTA+AGG | - | chr7_4:22856642-22856661 | None:intergenic | 30.0% | |
| TTGCCAAATAAATAGAAACG+TGG | - | chr7_4:22856832-22856851 | None:intergenic | 30.0% | |
| ! | GGTTGGTTATATATTCTGTT+AGG | + | chr7_4:22857025-22857044 | Msa1145910:intron | 30.0% |
| !! | CTTGACATGAGCTATTTTAT+AGG | + | chr7_4:22857159-22857178 | Msa1145910:intron | 30.0% |
| ACATTTAAAGACCCTACAAA+AGG | + | chr7_4:22857363-22857382 | Msa1145910:CDS | 30.0% | |
| ! | CCAACAAATATCCTTTTGTA+GGG | - | chr7_4:22857377-22857396 | None:intergenic | 30.0% |
| ! | TCCAACAAATATCCTTTTGT+AGG | - | chr7_4:22857378-22857397 | None:intergenic | 30.0% |
| TTTGCAAAATTTCCAGCTAT+GGG | - | chr7_4:22857490-22857509 | None:intergenic | 30.0% | |
| ATTTGCAAAATTTCCAGCTA+TGG | - | chr7_4:22857491-22857510 | None:intergenic | 30.0% | |
| AAATTTAGACAAGTACGAGT+CGG | + | chr7_4:22857521-22857540 | Msa1145910:intron | 30.0% | |
| !!! | CTCTGGCTATTTTTTTTAAC+AGG | + | chr7_4:22857643-22857662 | Msa1145910:intron | 30.0% |
| ! | GAAAGTGTAAGTCCATATAT+AGG | + | chr7_4:22857823-22857842 | Msa1145910:intron | 30.0% |
| ! | TTTTCTCAAATTATTAGCGG+TGG | - | chr7_4:22857913-22857932 | None:intergenic | 30.0% |
| ! | TGGGTACTAACACATATTTT+TGG | - | chr7_4:22858097-22858116 | None:intergenic | 30.0% |
| GAAGAACATAATGTCATATC+GGG | + | chr7_4:22858592-22858611 | Msa1145910:intron | 30.0% | |
| ! | ATAATGTCATATCGGGTTTT+CGG | + | chr7_4:22858599-22858618 | Msa1145910:intron | 30.0% |
| TCACCAAAATTCCATTATTC+AGG | - | chr7_4:22858984-22859003 | None:intergenic | 30.0% | |
| ! | TCATCGACATCAATCATTTT+CGG | - | chr7_4:22859059-22859078 | None:intergenic | 30.0% |
| GATGATACATGCATTAAATG+AGG | + | chr7_4:22859074-22859093 | Msa1145910:intron | 30.0% | |
| GATATGTGAAAGATAACTGA+AGG | - | chr7_4:22859243-22859262 | None:intergenic | 30.0% | |
| CTCAAAACGTCATACAATTT+GGG | + | chr7_4:22859348-22859367 | Msa1145910:intron | 30.0% | |
| TACGATCTAGTTACCTTATA+AGG | - | chr7_4:22859925-22859944 | None:intergenic | 30.0% | |
| TTCTTTGTACACTACATTTG+AGG | + | chr7_4:22860118-22860137 | Msa1145910:intron | 30.0% | |
| ! | CCCTTTTCTTAATGTAACTT+TGG | + | chr7_4:22860187-22860206 | Msa1145910:intron | 30.0% |
| ! | TTGTCCCTGACTTTTATTAA+TGG | + | chr7_4:22860280-22860299 | Msa1145910:intron | 30.0% |
| GATATTTGGCAATGATTATG+AGG | + | chr7_4:22860368-22860387 | Msa1145910:intron | 30.0% | |
| AAATTCATTATTAGCCGAGA+GGG | - | chr7_4:22860454-22860473 | None:intergenic | 30.0% | |
| TAAATTCATTATTAGCCGAG+AGG | - | chr7_4:22860455-22860474 | None:intergenic | 30.0% | |
| ! | ATAATAGTGTGCATTTTGGA+AGG | + | chr7_4:22860537-22860556 | Msa1145910:intron | 30.0% |
| !! | CATTCTAAAACAGCAATGTA+TGG | - | chr7_4:22860628-22860647 | None:intergenic | 30.0% |
| GATTAAAGCAAGTCTTGATA+TGG | + | chr7_4:22860762-22860781 | Msa1145910:intron | 30.0% | |
| TTGCAGTTGACATTAGTTAT+TGG | - | chr7_4:22860795-22860814 | None:intergenic | 30.0% | |
| ! | TTTTCCTTTACTTTGCGTTT+TGG | - | chr7_4:22861239-22861258 | None:intergenic | 30.0% |
| AGAAGAACATAATGTCATGT+CGG | + | chr7_4:22861432-22861451 | Msa1145910:intron | 30.0% | |
| ! | ATAATGTCATGTCGGATTTT+CGG | + | chr7_4:22861440-22861459 | Msa1145910:intron | 30.0% |
| !!! | TTAGGCAAACTTTTTTTGAG+AGG | - | chr7_4:22861602-22861621 | None:intergenic | 30.0% |
| TCACCAAAATTCCATTATTC+AGG | - | chr7_4:22858984-22859003 | None:intergenic | 30.0% | |
| ! | TCATCCACATCAATCATTTT+CGG | - | chr7_4:22861883-22861902 | None:intergenic | 30.0% |
| GATGATACATGCATTAAATG+AGG | + | chr7_4:22859074-22859093 | Msa1145910:intron | 30.0% | |
| ! | ATTTATTTGTTGCACATGTG+AGG | + | chr7_4:22862160-22862179 | Msa1145910:intron | 30.0% |
| ! | GTGTCTTTGTTTATATTGAC+CGG | + | chr7_4:22862185-22862204 | Msa1145910:intron | 30.0% |
| AGAGCTTGAACAAAAAACTT+GGG | - | chr7_4:22862293-22862312 | None:intergenic | 30.0% | |
| GTTCACTCAATTACCTTATA+AGG | - | chr7_4:22862935-22862954 | None:intergenic | 30.0% | |
| CTGGCTATAATTCCAAAAAT+TGG | + | chr7_4:22863169-22863188 | Msa1145910:intron | 30.0% | |
| !!! | CCATCACAACTTTTTTTTTC+AGG | - | chr7_4:22863222-22863241 | None:intergenic | 30.0% |
| CCTGAAAAAAAAAGTTGTGA+TGG | + | chr7_4:22863219-22863238 | Msa1145910:intron | 30.0% | |
| TGTTTACTGTATGTTCTACC+AGG | + | chr7_4:22856159-22856178 | Msa1145910:intron | 35.0% | |
| GTTTACTGTATGTTCTACCA+GGG | + | chr7_4:22856160-22856179 | Msa1145910:intron | 35.0% | |
| ACAAACAGTATTCATATCCC+TGG | - | chr7_4:22856180-22856199 | None:intergenic | 35.0% | |
| GCTTGCCCTAAATACTAAAT+CGG | + | chr7_4:22856365-22856384 | Msa1145910:intron | 35.0% | |
| ! | TTGAATGTGTAATGACTTGG+CGG | - | chr7_4:22856519-22856538 | None:intergenic | 35.0% |
| !! | TTCGGAGACACATTTTTCAA+TGG | - | chr7_4:22856574-22856593 | None:intergenic | 35.0% |
| TGGCCACGTTTCTATTTATT+TGG | + | chr7_4:22856826-22856845 | Msa1145910:CDS | 35.0% | |
| GATGAATACGTTACAACTCA+AGG | + | chr7_4:22856929-22856948 | Msa1145910:CDS | 35.0% | |
| GTGTCAATGCTGATGAAATT+TGG | - | chr7_4:22857345-22857364 | None:intergenic | 35.0% | |
| CCCTACAAAAGGATATTTGT+TGG | + | chr7_4:22857374-22857393 | Msa1145910:CDS | 35.0% | |
| !!! | TAATTGTGTTTTTGGAGCTG+AGG | + | chr7_4:22857401-22857420 | Msa1145910:CDS | 35.0% |
| TTTATAGTCTCCAGCTACAA+AGG | - | chr7_4:22857550-22857569 | None:intergenic | 35.0% | |
| TTGTAGCTGGAGACTATAAA+TGG | + | chr7_4:22857550-22857569 | Msa1145910:intron | 35.0% | |
| !! | TCTTATTACTAGCTTGCTGT+AGG | + | chr7_4:22857602-22857621 | Msa1145910:intron | 35.0% |
| !! | CGAGAATTTTAGTGTCAGAT+GGG | - | chr7_4:22857752-22857771 | None:intergenic | 35.0% |
| !! | ACGAGAATTTTAGTGTCAGA+TGG | - | chr7_4:22857753-22857772 | None:intergenic | 35.0% |
| ATCTGACACTAAAATTCTCG+TGG | + | chr7_4:22857752-22857771 | Msa1145910:intron | 35.0% | |
| CGCAGAAGATAACCTATATA+TGG | - | chr7_4:22857838-22857857 | None:intergenic | 35.0% | |
| ! | TTGGTTAAGCTTTTTGTTGC+CGG | + | chr7_4:22858405-22858424 | Msa1145910:intron | 35.0% |
| ACTCTAGACGTAGAAACAAA+CGG | + | chr7_4:22858508-22858527 | Msa1145910:intron | 35.0% | |
| ! | TAATGTCATATCGGGTTTTC+GGG | + | chr7_4:22858600-22858619 | Msa1145910:intron | 35.0% |
| ! | ATCGACATCAATCATTTTCG+GGG | - | chr7_4:22859057-22859076 | None:intergenic | 35.0% |
| ! | CATCGACATCAATCATTTTC+GGG | - | chr7_4:22859058-22859077 | None:intergenic | 35.0% |
| GCTCAAAACGTCATACAATT+TGG | + | chr7_4:22859347-22859366 | Msa1145910:intron | 35.0% | |
| GGAGTAATATGACTAAGAGA+TGG | + | chr7_4:22859377-22859396 | Msa1145910:intron | 35.0% | |
| !!! | ACCATCATTTTAGTTTGCTC+AGG | + | chr7_4:22859402-22859421 | Msa1145910:intron | 35.0% |
| TCCTGAGCAAACTAAAATGA+TGG | - | chr7_4:22859406-22859425 | None:intergenic | 35.0% | |
| AGAGGAGAGAGAGAAAATAA+TGG | - | chr7_4:22859497-22859516 | None:intergenic | 35.0% | |
| GAAAAGGGCTAAAGATATTG+TGG | - | chr7_4:22860175-22860194 | None:intergenic | 35.0% | |
| !! | ATATCAAAGTGCTGCTATCT+TGG | + | chr7_4:22860401-22860420 | Msa1145910:intron | 35.0% |
| !! | ATTTTGGAAGGATCAAGTTC+AGG | + | chr7_4:22860549-22860568 | Msa1145910:intron | 35.0% |
| ATCTAAGCTTAGTACACTTC+AGG | + | chr7_4:22860974-22860993 | Msa1145910:intron | 35.0% | |
| TGGTCACTATTAGAGTCTAT+TGG | - | chr7_4:22861219-22861238 | None:intergenic | 35.0% | |
| AACGCAAAGTAAAGGAAAAC+CGG | + | chr7_4:22861240-22861259 | Msa1145910:intron | 35.0% | |
| ACTCTAGACGTAGAAACAAA+TGG | + | chr7_4:22858508-22858527 | Msa1145910:intron | 35.0% | |
| ACGTAGAAACAAATGGTCTT+TGG | + | chr7_4:22861356-22861375 | Msa1145910:intron | 35.0% | |
| ! | TAATGTCATGTCGGATTTTC+GGG | + | chr7_4:22861441-22861460 | Msa1145910:intron | 35.0% |
| ! | ATCCACATCAATCATTTTCG+GGG | - | chr7_4:22861881-22861900 | None:intergenic | 35.0% |
| ! | CATCCACATCAATCATTTTC+GGG | - | chr7_4:22861882-22861901 | None:intergenic | 35.0% |
| CAGAGCTTGAACAAAAAACT+TGG | - | chr7_4:22862294-22862313 | None:intergenic | 35.0% | |
| GAGAGAGAGAGAGAAAATAA+TGG | - | chr7_4:22862456-22862475 | None:intergenic | 35.0% | |
| TAAGGTAATTGAGTGAACGT+TGG | + | chr7_4:22862937-22862956 | Msa1145910:intron | 35.0% | |
| AAGGTAATTGAGTGAACGTT+GGG | + | chr7_4:22862938-22862957 | Msa1145910:intron | 35.0% | |
| TTCAAATAGGTCGTGCAAAT+TGG | + | chr7_4:22863125-22863144 | Msa1145910:intron | 35.0% | |
| CAAATTGGTTGTTGTAAGGA+GGG | + | chr7_4:22863140-22863159 | Msa1145910:intron | 35.0% | |
| GTCCTTCTCATTGCTTTCTA+AGG | + | chr7_4:22856545-22856564 | Msa1145910:CDS | 40.0% | |
| !! | GGAGACACATTTTTCAATGG+AGG | - | chr7_4:22856571-22856590 | None:intergenic | 40.0% |
| TTGAAGCTGGAGGTTACAAA+TGG | + | chr7_4:22856598-22856617 | Msa1145910:CDS | 40.0% | |
| TTAAACCTTCGTTCATGCGT+AGG | + | chr7_4:22856759-22856778 | Msa1145910:intron | 40.0% | |
| AGCTTGTCTATATACCCATC+AGG | + | chr7_4:22856782-22856801 | Msa1145910:intron | 40.0% | |
| GCTTGTCTATATACCCATCA+GGG | + | chr7_4:22856783-22856802 | Msa1145910:intron | 40.0% | |
| ! | GCATTGATCTCCCAATCAAT+AGG | - | chr7_4:22856875-22856894 | None:intergenic | 40.0% |
| AACATGCAGATGCATCTGTT+AGG | + | chr7_4:22857286-22857305 | Msa1145910:intron | 40.0% | |
| TTCATGTCCTGAAAACAGAG+TGG | + | chr7_4:22857313-22857332 | Msa1145910:CDS | 40.0% | |
| TCATGTCCTGAAAACAGAGT+GGG | + | chr7_4:22857314-22857333 | Msa1145910:CDS | 40.0% | |
| GTTGTGAAGACTGCCAATAA+AGG | + | chr7_4:22857429-22857448 | Msa1145910:CDS | 40.0% | |
| GGATAAGCAATCGCCTTTAT+TGG | - | chr7_4:22857445-22857464 | None:intergenic | 40.0% | |
| ! | AAGCTCCTTTTATACCCCAA+TGG | + | chr7_4:22857666-22857685 | Msa1145910:CDS | 40.0% |
| ! | TTTCCCACAGATTTGGTCTT+TGG | - | chr7_4:22857793-22857812 | None:intergenic | 40.0% |
| CAACATGTTTCCCACAGATT+TGG | - | chr7_4:22857800-22857819 | None:intergenic | 40.0% | |
| ATGGATACGAACACAGACAT+CGG | + | chr7_4:22857862-22857881 | Msa1145910:intron | 40.0% | |
| TCTCAAATTATTAGCGGTGG+CGG | - | chr7_4:22857910-22857929 | None:intergenic | 40.0% | |
| TATACGTGTCTTTGTCGTGT+CGG | + | chr7_4:22857952-22857971 | Msa1145910:intron | 40.0% | |
| CTAGTGTACCAAAGAGTCTT+AGG | + | chr7_4:22858329-22858348 | Msa1145910:intron | 40.0% | |
| CCTAATGACCTAAGACTCTT+TGG | - | chr7_4:22858340-22858359 | None:intergenic | 40.0% | |
| CCAAAGAGTCTTAGGTCATT+AGG | + | chr7_4:22858337-22858356 | Msa1145910:intron | 40.0% | |
| ! | AGTGTACCAAAGCATTCACT+TGG | + | chr7_4:22858386-22858405 | Msa1145910:intron | 40.0% |
| GCTTAACCAAGTGAATGCTT+TGG | - | chr7_4:22858395-22858414 | None:intergenic | 40.0% | |
| TCAATTGACCCATAAACGCA+AGG | - | chr7_4:22858433-22858452 | None:intergenic | 40.0% | |
| ACGTAGAAACAAACGGTCTT+TGG | + | chr7_4:22858515-22858534 | Msa1145910:intron | 40.0% | |
| AGTCAATGTCACAAGTTGTC+TGG | - | chr7_4:22858950-22858969 | None:intergenic | 40.0% | |
| ! | GTCATACAATTTGGGACGAA+GGG | + | chr7_4:22859356-22859375 | Msa1145910:intron | 40.0% |
| GTCTGTTGAGAGACCTTATA+AGG | + | chr7_4:22859909-22859928 | Msa1145910:intron | 40.0% | |
| !! | ATATTGTGGACTGGTGATGA+GGG | - | chr7_4:22860161-22860180 | None:intergenic | 40.0% |
| ! | TTCCTCATTTTCCATGTCCA+TGG | + | chr7_4:22860943-22860962 | Msa1145910:intron | 40.0% |
| TTCCATGGACATGGAAAATG+AGG | - | chr7_4:22860948-22860967 | None:intergenic | 40.0% | |
| AGTGTACTAAGCTTAGATCG+TGG | - | chr7_4:22860972-22860991 | None:intergenic | 40.0% | |
| ! | TTAGTACACTTCAGGTTCTG+AGG | + | chr7_4:22860982-22861001 | Msa1145910:intron | 40.0% |
| GTGATGAAATACTCGTGTCT+TGG | + | chr7_4:22861076-22861095 | Msa1145910:intron | 40.0% | |
| CGTGTCTTGGTTGAAATCAT+TGG | + | chr7_4:22861089-22861108 | Msa1145910:intron | 40.0% | |
| GTGACCAAAACGCAAAGTAA+AGG | + | chr7_4:22861232-22861251 | Msa1145910:intron | 40.0% | |
| TCCAAAAGCCTTGCGTTTAT+GGG | + | chr7_4:22861263-22861282 | Msa1145910:intron | 40.0% | |
| TCAATTGACCCATAAACGCA+AGG | - | chr7_4:22858433-22858452 | None:intergenic | 40.0% | |
| AACAAATGGTCTTTGGACCA+CGG | + | chr7_4:22861363-22861382 | Msa1145910:intron | 40.0% | |
| AGTCAATGTCACAAGTTGTC+TGG | - | chr7_4:22858950-22858969 | None:intergenic | 40.0% | |
| ! | TATTTGTTGCACATGTGAGG+AGG | + | chr7_4:22862163-22862182 | Msa1145910:intron | 40.0% |
| GTCTGTTGAGAGACCTTATA+AGG | + | chr7_4:22859909-22859928 | Msa1145910:intron | 40.0% | |
| ! | TTGAGTGAACGTTGGGTTTT+TGG | + | chr7_4:22862945-22862964 | Msa1145910:intron | 40.0% |
| CGTGCAAATTGGTTGTTGTA+AGG | + | chr7_4:22863136-22863155 | Msa1145910:intron | 40.0% | |
| GCAAATTGGTTGTTGTAAGG+AGG | + | chr7_4:22863139-22863158 | Msa1145910:intron | 40.0% | |
| ATGGGTGTGGTAGACAACAA+TGG | - | chr7_4:22856203-22856222 | None:intergenic | 45.0% | |
| TTGTCTACCACACCCATGAA+AGG | + | chr7_4:22856206-22856225 | Msa1145910:intron | 45.0% | |
| TGAATCACCTTTCATGGGTG+TGG | - | chr7_4:22856216-22856235 | None:intergenic | 45.0% | |
| GGCCTTAGAAAGCAATGAGA+AGG | - | chr7_4:22856550-22856569 | None:intergenic | 45.0% | |
| ACCTCCAGCTTCAAACTCTT+CGG | - | chr7_4:22856592-22856611 | None:intergenic | 45.0% | |
| CATGTCCTGAAAACAGAGTG+GGG | + | chr7_4:22857315-22857334 | Msa1145910:CDS | 45.0% | |
| ! | GAATACCCCACTCTGTTTTC+AGG | - | chr7_4:22857323-22857342 | None:intergenic | 45.0% |
| CAGCTATGGGAAATAGTGAC+AGG | - | chr7_4:22857477-22857496 | None:intergenic | 45.0% | |
| CTGTCACTATTTCCCATAGC+TGG | + | chr7_4:22857475-22857494 | Msa1145910:CDS | 45.0% | |
| CGACTCCATTGGGGTATAAA+AGG | - | chr7_4:22857674-22857693 | None:intergenic | 45.0% | |
| TTTCCCTCAACGACTCCATT+GGG | - | chr7_4:22857684-22857703 | None:intergenic | 45.0% | |
| AATGGAGTCGTTGAGGGAAA+GGG | + | chr7_4:22857684-22857703 | Msa1145910:CDS | 45.0% | |
| AGGTTATCTTCTGCGAAGCA+TGG | + | chr7_4:22857843-22857862 | Msa1145910:intron | 45.0% | |
| ! | CGTTATGTGTGTTTCGGTGT+CGG | - | chr7_4:22857999-22858018 | None:intergenic | 45.0% |
| TCCTCGCGTTATGTGTGTTT+CGG | - | chr7_4:22858005-22858024 | None:intergenic | 45.0% | |
| AACAAACGGTCTTTGGACCA+CGG | + | chr7_4:22858522-22858541 | Msa1145910:intron | 45.0% | |
| TCTCCAGCTCAGATTTAGTG+TGG | + | chr7_4:22858920-22858939 | Msa1145910:intron | 45.0% | |
| CTCCAGCTCAGATTTAGTGT+GGG | + | chr7_4:22858921-22858940 | Msa1145910:intron | 45.0% | |
| TCCAGCTCAGATTTAGTGTG+GGG | + | chr7_4:22858922-22858941 | Msa1145910:intron | 45.0% | |
| ! | CGTCATACAATTTGGGACGA+AGG | + | chr7_4:22859355-22859374 | Msa1145910:intron | 45.0% |
| !! | GATATTGTGGACTGGTGATG+AGG | - | chr7_4:22860162-22860181 | None:intergenic | 45.0% |
| GGGCTAAAGATATTGTGGAC+TGG | - | chr7_4:22860170-22860189 | None:intergenic | 45.0% | |
| ! | CGCAGTCGGTCTTTTTGAAT+GGG | - | chr7_4:22860232-22860251 | None:intergenic | 45.0% |
| CCATTCAAAAAGACCGACTG+CGG | + | chr7_4:22860230-22860249 | Msa1145910:intron | 45.0% | |
| GGACAATCACTTAGTCACGT+TGG | - | chr7_4:22860266-22860285 | None:intergenic | 45.0% | |
| TTCATTATTAGCCGAGAGGG+AGG | - | chr7_4:22860451-22860470 | None:intergenic | 45.0% | |
| ! | TAAACGCAAGGCTTTTGGAC+CGG | - | chr7_4:22861262-22861281 | None:intergenic | 45.0% |
| GTCCAAAAGCCTTGCGTTTA+TGG | + | chr7_4:22861262-22861281 | Msa1145910:intron | 45.0% | |
| ! | ACCCATAAACGCAAGGCTTT+TGG | - | chr7_4:22861267-22861286 | None:intergenic | 45.0% |
| GGGAGACTTATTTGGGCTAT+AGG | + | chr7_4:22861387-22861406 | Msa1145910:intron | 45.0% | |
| TCTCCAGCTCAGATTTAGTG+TGG | + | chr7_4:22858920-22858939 | Msa1145910:intron | 45.0% | |
| CTCCAGCTCAGATTTAGTGT+GGG | + | chr7_4:22858921-22858940 | Msa1145910:intron | 45.0% | |
| TCCAGCTCAGATTTAGTGTG+GGG | + | chr7_4:22858922-22858941 | Msa1145910:intron | 45.0% | |
| CACCCCGAAAATGATTGATG+TGG | + | chr7_4:22859052-22859071 | Msa1145910:intron | 45.0% | |
| ! | TCGATGCTTCGTCAGTTTTC+AGG | + | chr7_4:22862088-22862107 | Msa1145910:intron | 45.0% |
| GTTGTAAGGAGGGTAAAAGC+TGG | + | chr7_4:22863150-22863169 | Msa1145910:intron | 45.0% | |
| !!! | AATTTTTTATTTTTTTTTGA+GGG | + | chr7_4:22858214-22858233 | Msa1145910:intron | 5.0% |
| !! | AAATTTATTTAAATTCATAA+CGG | - | chr7_4:22863287-22863306 | None:intergenic | 5.0% |
| ! | GTCTCCGAAGAGTTTGAAGC+TGG | + | chr7_4:22856585-22856604 | Msa1145910:CDS | 50.0% |
| ! | TCCGAAGAGTTTGAAGCTGG+AGG | + | chr7_4:22856588-22856607 | Msa1145910:CDS | 50.0% |
| AAGCTCCTACGCATGAACGA+AGG | - | chr7_4:22856767-22856786 | None:intergenic | 50.0% | |
| ! | AACACAGAGAGGCATGGACA+TGG | + | chr7_4:22856806-22856825 | Msa1145910:CDS | 50.0% |
| GAGTCGGAATCCTTTGTAGC+TGG | + | chr7_4:22857537-22857556 | Msa1145910:intron | 50.0% | |
| ATACCCCAATGGAGTCGTTG+AGG | + | chr7_4:22857677-22857696 | Msa1145910:CDS | 50.0% | |
| TACCCCAATGGAGTCGTTGA+GGG | + | chr7_4:22857678-22857697 | Msa1145910:CDS | 50.0% | |
| TTCCCTCAACGACTCCATTG+GGG | - | chr7_4:22857683-22857702 | None:intergenic | 50.0% | |
| CTTTCCCTCAACGACTCCAT+TGG | - | chr7_4:22857685-22857704 | None:intergenic | 50.0% | |
| CAATGGAGTCGTTGAGGGAA+AGG | + | chr7_4:22857683-22857702 | Msa1145910:CDS | 50.0% | |
| GCGCCAAAGACCAAATCTGT+GGG | + | chr7_4:22857787-22857806 | Msa1145910:intron | 50.0% | |
| ACCGAAACACACATAACGCG+AGG | + | chr7_4:22858001-22858020 | Msa1145910:intron | 50.0% | |
| ACCACGGTGGGAGACTTATT+CGG | + | chr7_4:22858538-22858557 | Msa1145910:intron | 50.0% | |
| GGGAGACTTATTCGGGCTAT+AGG | + | chr7_4:22858546-22858565 | Msa1145910:intron | 50.0% | |
| CCAGCTCAGATTTAGTGTGG+GGG | + | chr7_4:22858923-22858942 | Msa1145910:intron | 50.0% | |
| ! | CCGCAGTCGGTCTTTTTGAA+TGG | - | chr7_4:22860233-22860252 | None:intergenic | 50.0% |
| TGGTGTCTATCTTCCGCAGT+CGG | - | chr7_4:22860246-22860265 | None:intergenic | 50.0% | |
| AGCTTAGATCGTGGCTTCCA+TGG | - | chr7_4:22860963-22860982 | None:intergenic | 50.0% | |
| AAATGGTCTTTGGACCACGG+TGG | + | chr7_4:22861366-22861385 | Msa1145910:intron | 50.0% | |
| AATGGTCTTTGGACCACGGT+GGG | + | chr7_4:22861367-22861386 | Msa1145910:intron | 50.0% | |
| ACCACGGTGGGAGACTTATT+TGG | + | chr7_4:22858538-22858557 | Msa1145910:intron | 50.0% | |
| CCACGGTGGGAGACTTATTT+GGG | + | chr7_4:22861380-22861399 | Msa1145910:intron | 50.0% | |
| CCAGCTCAGATTTAGTGTGG+GGG | + | chr7_4:22858923-22858942 | Msa1145910:intron | 50.0% | |
| AGCAGAGATACGTGCACAAC+CGG | - | chr7_4:22862207-22862226 | None:intergenic | 50.0% | |
| ACCCATCAGGGAACACAGAG+AGG | + | chr7_4:22856795-22856814 | Msa1145910:intron | 55.0% | |
| GCCTCTCTGTGTTCCCTGAT+GGG | - | chr7_4:22856799-22856818 | None:intergenic | 55.0% | |
| TGCCTCTCTGTGTTCCCTGA+TGG | - | chr7_4:22856800-22856819 | None:intergenic | 55.0% | |
| TCAGGGAACACAGAGAGGCA+TGG | + | chr7_4:22856800-22856819 | Msa1145910:intron | 55.0% | |
| CGCGCCAAAGACCAAATCTG+TGG | + | chr7_4:22857786-22857805 | Msa1145910:intron | 55.0% | |
| !! | ACGCGAGGAGTGTTCGTGAT+AGG | + | chr7_4:22858016-22858035 | Msa1145910:intron | 55.0% |
| TTGCCGGAGCCTTGCGTTTA+TGG | + | chr7_4:22858421-22858440 | Msa1145910:intron | 55.0% | |
| TGCCGGAGCCTTGCGTTTAT+GGG | + | chr7_4:22858422-22858441 | Msa1145910:intron | 55.0% | |
| GACCCATAAACGCAAGGCTC+CGG | - | chr7_4:22858427-22858446 | None:intergenic | 55.0% | |
| AAACGGTCTTTGGACCACGG+TGG | + | chr7_4:22858525-22858544 | Msa1145910:intron | 55.0% | |
| AACGGTCTTTGGACCACGGT+GGG | + | chr7_4:22858526-22858545 | Msa1145910:intron | 55.0% | |
| CCACGGTGGGAGACTTATTC+GGG | + | chr7_4:22858539-22858558 | Msa1145910:intron | 55.0% | |
| CCCCCACACTAAATCTGAGC+TGG | - | chr7_4:22858926-22858945 | None:intergenic | 55.0% | |
| TCGTAAACCCGTGCTTCGCA+CGG | + | chr7_4:22859940-22859959 | Msa1145910:intron | 55.0% | |
| AAGCTAGGCAACCTCCCTCT+CGG | + | chr7_4:22860437-22860456 | Msa1145910:intron | 55.0% | |
| GATCGTGGCTTCCATGGACA+TGG | - | chr7_4:22860957-22860976 | None:intergenic | 55.0% | |
| CCCAAATAAGTCTCCCACCG+TGG | - | chr7_4:22861383-22861402 | None:intergenic | 55.0% | |
| CCCCCACACTAAATCTGAGC+TGG | - | chr7_4:22858926-22858945 | None:intergenic | 55.0% | |
| CCCGAATAAGTCTCCCACCG+TGG | - | chr7_4:22858542-22858561 | None:intergenic | 60.0% | |
| CGTAAACCCGTGCTTCGCAC+GGG | + | chr7_4:22859941-22859960 | Msa1145910:intron | 60.0% | |
| TCGTTGTCCCGTGCGAAGCA+CGG | - | chr7_4:22859951-22859970 | None:intergenic | 60.0% | |
| CGTTGTCCCGTGCGAAGCAC+GGG | - | chr7_4:22859950-22859969 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 22856158 | 22863372 | 22856158 | ID=Msa1145910;Name=Msa1145910 |
| chr7_4 | mRNA | 22856158 | 22863372 | 22856158 | ID=Msa1145910-mRNA-1;Parent=Msa1145910;Name=Msa1145910-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.28|0.37|1|0.42|0.37|8|198|260 |
| chr7_4 | exon | 22856158 | 22856166 | 22856158 | ID=Msa1145910-mRNA-1:exon:5737;Parent=Msa1145910-mRNA-1 |
| chr7_4 | exon | 22856505 | 22856619 | 22856505 | ID=Msa1145910-mRNA-1:exon:5738;Parent=Msa1145910-mRNA-1 |
| chr7_4 | exon | 22856804 | 22856950 | 22856804 | ID=Msa1145910-mRNA-1:exon:5739;Parent=Msa1145910-mRNA-1 |
| chr7_4 | exon | 22857295 | 22857532 | 22857295 | ID=Msa1145910-mRNA-1:exon:5740;Parent=Msa1145910-mRNA-1 |
| chr7_4 | exon | 22857665 | 22857770 | 22857665 | ID=Msa1145910-mRNA-1:exon:5741;Parent=Msa1145910-mRNA-1 |
| chr7_4 | exon | 22858908 | 22858917 | 22858908 | ID=Msa1145910-mRNA-1:exon:5742;Parent=Msa1145910-mRNA-1 |
| chr7_4 | exon | 22861732 | 22862025 | 22861732 | ID=Msa1145910-mRNA-1:exon:5743;Parent=Msa1145910-mRNA-1 |
| chr7_4 | exon | 22863311 | 22863372 | 22863311 | ID=Msa1145910-mRNA-1:exon:5744;Parent=Msa1145910-mRNA-1 |
| chr7_4 | CDS | 22856158 | 22856166 | 22856158 | ID=Msa1145910-mRNA-1:cds;Parent=Msa1145910-mRNA-1 |
| chr7_4 | CDS | 22856505 | 22856619 | 22856505 | ID=Msa1145910-mRNA-1:cds;Parent=Msa1145910-mRNA-1 |
| chr7_4 | CDS | 22856804 | 22856950 | 22856804 | ID=Msa1145910-mRNA-1:cds;Parent=Msa1145910-mRNA-1 |
| chr7_4 | CDS | 22857295 | 22857532 | 22857295 | ID=Msa1145910-mRNA-1:cds;Parent=Msa1145910-mRNA-1 |
| chr7_4 | CDS | 22857665 | 22857770 | 22857665 | ID=Msa1145910-mRNA-1:cds;Parent=Msa1145910-mRNA-1 |
| chr7_4 | CDS | 22858908 | 22858917 | 22858908 | ID=Msa1145910-mRNA-1:cds;Parent=Msa1145910-mRNA-1 |
| chr7_4 | CDS | 22861732 | 22861889 | 22861732 | ID=Msa1145910-mRNA-1:cds;Parent=Msa1145910-mRNA-1 |
| chr7_4 | three_prime_UTR | 22861890 | 22862025 | 22861890 | ID=Msa1145910-mRNA-1:three_prime_utr;Parent=Msa1145910-mRNA-1 |
| chr7_4 | three_prime_UTR | 22863311 | 22863372 | 22863311 | ID=Msa1145910-mRNA-1:three_prime_utr;Parent=Msa1145910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
