AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1147680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1147680 MtrunA17_Chr7g0234641 98.118 425 6 2 1 424 1 424 0.0 844
Msa1147680 MtrunA17_Chr8g0338741 62.827 382 133 5 7 381 14 393 2.59e-169 481
Msa1147680 MtrunA17_Chr4g0032761 39.378 386 210 8 8 374 10 390 1.28e-93 288
Msa1147680 MtrunA17_Chr2g0329011 41.761 352 172 6 6 352 10 333 1.18e-88 274
Msa1147680 MtrunA17_Chr1g0179101 39.623 371 194 9 1 352 462 821 3.02e-75 251
Msa1147680 MtrunA17_Chr2g0309421 38.587 368 190 11 8 352 172 526 5.21e-74 241
Msa1147680 MtrunA17_Chr2g0285711 36.538 364 200 10 8 352 74 425 3.99e-73 236
Msa1147680 MtrunA17_Chr7g0266031 39.516 372 195 10 1 353 484 844 3.99e-73 245
Msa1147680 MtrunA17_Chr8g0381091 36.170 376 189 11 7 352 69 423 7.84e-71 230
Msa1147680 MtrunA17_Chr7g0250631 36.585 410 222 12 8 396 361 753 1.13e-70 237
Msa1147680 MtrunA17_Chr3g0080101 36.939 379 193 11 3 353 409 769 1.82e-70 237
Msa1147680 MtrunA17_Chr2g0290691 36.022 372 204 9 7 353 200 562 3.28e-70 232
Msa1147680 MtrunA17_Chr4g0030361 35.593 354 172 8 5 349 301 607 1.06e-69 232
Msa1147680 MtrunA17_Chr4g0063311 36.573 391 199 11 1 355 83 460 2.64e-68 224
Msa1147680 MtrunA17_Chr7g0227331 35.200 375 209 9 8 357 229 594 2.00e-67 225
Msa1147680 MtrunA17_Chr8g0335351 35.714 364 204 8 8 351 367 720 7.99e-67 227
Msa1147680 MtrunA17_Chr2g0321101 37.322 351 186 9 12 339 90 429 2.75e-66 218
Msa1147680 MtrunA17_Chr8g0369091 36.080 352 177 8 5 349 591 901 4.04e-66 227
Msa1147680 MtrunA17_Chr8g0356291 35.829 374 196 9 8 354 124 480 5.53e-66 219
Msa1147680 MtrunA17_Chr2g0312641 36.236 356 188 9 8 351 91 419 2.42e-65 216
Msa1147680 MtrunA17_Chr6g0449401 32.530 415 216 10 8 367 260 665 2.51e-63 216
Msa1147680 MtrunA17_Chr2g0327561 35.593 354 187 8 5 351 620 939 2.97e-63 219
Msa1147680 MtrunA17_Chr6g0478601 33.994 353 182 9 12 355 110 420 5.94e-51 179
Msa1147680 MtrunA17_Chr5g0428981 31.944 360 197 8 10 362 760 1078 1.73e-47 174
Msa1147680 MtrunA17_Chr4g0018201 31.944 360 197 8 10 362 756 1074 3.71e-47 174
Msa1147680 MtrunA17_Chr4g0059751 30.081 369 171 11 12 364 88 385 1.83e-43 157
Msa1147680 MtrunA17_Chr1g0183651 29.945 364 214 11 12 366 119 450 2.70e-43 159
Msa1147680 MtrunA17_Chr7g0245031 29.042 334 160 7 12 339 147 409 1.30e-41 153
Msa1147680 MtrunA17_Chr1g0153321 32.853 347 191 13 16 352 111 425 1.37e-41 154
Msa1147680 MtrunA17_Chr1g0187581 29.396 364 217 11 12 366 116 448 8.06e-40 149
Msa1147680 MtrunA17_Chr1g0167351 29.722 360 214 11 16 366 113 442 4.67e-39 147
Msa1147680 MtrunA17_Chr1g0167311 29.651 344 207 9 16 353 118 432 1.08e-38 146
Msa1147680 MtrunA17_Chr3g0135951 29.722 360 202 12 12 353 93 419 4.79e-38 144
Msa1147680 MtrunA17_Chr7g0261491 28.219 365 219 11 12 364 119 452 5.48e-37 142
Msa1147680 MtrunA17_Chr2g0299781 29.191 346 197 11 12 340 112 426 5.02e-36 138
Msa1147680 MtrunA17_Chr1g0197721 31.529 314 150 9 42 349 78 332 1.57e-33 131
Msa1147680 MtrunA17_Chr2g0286501 26.738 374 199 11 15 385 51 352 2.51e-26 112
Msa1147680 MtrunA17_Chr3g0140631 26.959 319 157 8 19 334 43 288 1.52e-25 105
Msa1147680 MtrunA17_Chr5g0419441 25.455 330 169 9 14 339 240 496 1.89e-22 100
Msa1147680 MtrunA17_Chr2g0330211 24.786 351 199 8 8 343 13 313 8.33e-19 88.6
Msa1147680 MtrunA17_Chr7g0244561 26.923 338 176 9 10 343 13 283 1.47e-17 84.3
Msa1147680 MtrunA17_Chr3g0107051 31.111 180 112 4 18 195 26 195 6.08e-17 82.4
Msa1147680 MtrunA17_Chr3g0125381 36.111 108 62 2 233 335 102 207 1.63e-16 78.2
Msa1147680 MtrunA17_Chr3g0125381 27.815 151 102 3 77 222 9 157 3.96e-12 65.5
Msa1147680 MtrunA17_Chr2g0321841 24.771 327 169 10 14 335 5 259 2.06e-16 81.6
Msa1147680 MtrunA17_Chr8g0351491 36.449 107 61 2 234 335 164 268 2.11e-16 79.0
Msa1147680 MtrunA17_Chr8g0351491 33.758 157 93 4 12 167 15 161 3.28e-15 75.5
Msa1147680 MtrunA17_Chr8g0379091 33.557 149 89 3 19 167 32 170 3.09e-16 80.5
Msa1147680 MtrunA17_Chr4g0025671 25.076 327 168 10 14 335 9 263 3.16e-16 81.3
Msa1147680 MtrunA17_Chr2g0284031 32.298 161 99 3 7 167 25 175 6.82e-16 79.7
Msa1147680 MtrunA17_Chr6g0486661 34.711 121 73 3 234 348 909 1029 1.19e-15 79.3
Msa1147680 MtrunA17_Chr7g0272841 30.263 152 102 2 19 170 74 221 3.31e-15 77.8
Msa1147680 MtrunA17_Chr7g0258051 22.671 322 174 8 14 331 17 267 3.41e-15 77.8
Msa1147680 MtrunA17_Chr8g0353621 35.922 103 59 2 234 331 158 258 8.44e-15 74.3
Msa1147680 MtrunA17_Chr8g0353621 26.941 219 137 5 12 222 9 212 1.82e-12 67.4
Msa1147680 MtrunA17_Chr2g0317001 22.393 326 178 9 16 338 18 271 1.22e-14 76.3
Msa1147680 MtrunA17_Chr1g0205931 30.519 154 99 4 19 170 61 208 1.43e-14 75.9
Msa1147680 MtrunA17_Chr2g0284011 26.486 185 124 4 7 189 6 180 1.48e-14 75.1
Msa1147680 MtrunA17_Chr6g0450571 24.425 348 179 11 8 343 11 286 4.51e-14 74.3
Msa1147680 MtrunA17_Chr3g0130151 29.299 157 102 4 19 174 250 398 6.04e-14 73.9
Msa1147680 MtrunA17_Chr4g0013131 28.902 173 111 4 19 189 18 180 6.30e-14 73.6
Msa1147680 MtrunA17_Chr3g0107011 28.188 149 97 3 19 167 20 158 8.85e-14 72.8
Msa1147680 MtrunA17_Chr3g0107011 33.333 120 76 3 218 335 152 269 4.43e-12 67.8
Msa1147680 MtrunA17_Chr1g0173921 28.824 170 110 4 10 177 1 161 1.94e-13 72.4
Msa1147680 MtrunA17_Chr5g0432471 26.816 179 119 4 19 195 18 186 2.10e-13 71.6
Msa1147680 MtrunA17_Chr5g0432471 39.394 99 58 2 239 335 169 267 2.93e-11 65.1
Msa1147680 MtrunA17_Chr1g0202831 27.922 154 102 4 19 171 417 562 2.35e-13 72.4
Msa1147680 MtrunA17_Chr8g0384301 28.758 153 100 4 19 170 305 449 2.58e-13 72.0
Msa1147680 MtrunA17_Chr5g0409421 25.177 282 136 9 14 294 5 212 2.71e-13 71.2
Msa1147680 MtrunA17_Chr3g0116701 26.923 182 94 3 102 283 176 318 2.83e-13 71.2
Msa1147680 MtrunA17_Chr1g0205421 32.432 148 90 3 19 166 18 155 3.46e-13 70.9
Msa1147680 MtrunA17_Chr4g0001331 30.380 158 100 3 10 167 17 164 3.47e-13 71.2
Msa1147680 MtrunA17_Chr1g0150321 35.185 108 67 1 60 167 53 157 5.02e-13 70.5
Msa1147680 MtrunA17_Chr1g0150321 38.835 103 60 3 242 341 173 275 4.77e-11 64.3
Msa1147680 MtrunA17_Chr7g0274941 40.196 102 55 2 236 331 170 271 5.07e-13 69.3
Msa1147680 MtrunA17_Chr1g0188991 37.838 111 54 3 239 338 174 280 7.69e-13 70.5
Msa1147680 MtrunA17_Chr5g0432491 32.215 149 92 3 19 167 29 168 7.80e-13 70.1
Msa1147680 MtrunA17_Chr5g0432491 35.354 99 62 2 239 335 181 279 1.40e-11 65.9
Msa1147680 MtrunA17_Chr1g0188031 27.326 172 117 4 64 229 65 234 9.19e-13 69.7
Msa1147680 MtrunA17_Chr5g0407121 27.018 285 170 12 102 370 125 387 1.09e-12 69.3
Msa1147680 MtrunA17_Chr3g0114511 30.058 173 107 4 19 189 38 198 1.52e-12 68.9
Msa1147680 MtrunA17_Chr7g0260191 21.779 326 180 8 14 335 5 259 1.85e-12 69.3
Msa1147680 MtrunA17_Chr8g0346071 22.257 319 178 8 18 335 22 271 2.86e-12 68.2
Msa1147680 MtrunA17_Chr1g0203881 31.250 160 93 6 19 172 47 195 2.92e-12 68.2
Msa1147680 MtrunA17_Chr1g0162301 36.893 103 57 4 240 334 178 280 3.86e-12 67.4
Msa1147680 MtrunA17_Chr7g0267751 38.095 105 59 2 236 335 291 394 3.92e-12 68.2
Msa1147680 MtrunA17_Chr5g0396361 23.239 284 145 7 16 296 143 356 3.99e-12 68.2
Msa1147680 MtrunA17_Chr7g0244521 28.324 173 112 4 19 189 18 180 4.40e-12 67.8
Msa1147680 MtrunA17_Chr8g0388891 25.000 164 113 3 7 168 127 282 5.26e-12 67.0
Msa1147680 MtrunA17_Chr1g0190831 21.713 327 179 9 14 335 5 259 5.67e-12 67.8
Msa1147680 MtrunA17_Chr8g0386981 30.065 153 94 5 19 168 414 556 5.92e-12 67.8
Msa1147680 MtrunA17_Chr4g0058241 27.869 183 91 5 102 283 180 322 6.27e-12 67.0
Msa1147680 MtrunA17_Chr4g0000431 35.200 125 66 3 225 338 169 289 6.58e-12 67.4
Msa1147680 MtrunA17_Chr1g0190131 34.653 101 61 1 236 331 161 261 8.81e-12 65.5
Msa1147680 MtrunA17_Chr7g0218071 28.571 182 114 5 3 180 110 279 9.67e-12 67.0
Msa1147680 MtrunA17_Chr4g0074111 26.667 150 100 3 18 167 23 162 1.04e-11 66.2
Msa1147680 MtrunA17_Chr8g0345801 26.316 247 142 9 19 253 21 239 1.55e-11 64.7
Msa1147680 MtrunA17_Chr4g0063881 30.464 151 96 3 19 167 13 156 2.38e-11 65.5
Msa1147680 MtrunA17_Chr2g0302431 28.333 180 118 4 18 195 25 195 2.40e-11 65.5
Msa1147680 MtrunA17_Chr6g0450871 27.517 149 89 4 64 194 118 265 2.92e-11 64.7
Msa1147680 MtrunA17_Chr3g0132671 36.000 100 60 3 239 335 204 302 4.09e-11 64.7
Msa1147680 MtrunA17_Chr6g0468751 35.537 121 69 3 242 360 177 290 4.24e-11 64.7
Msa1147680 MtrunA17_Chr8g0369451 22.191 356 171 11 14 337 5 286 4.44e-11 64.3
Msa1147680 MtrunA17_Chr4g0038501 24.699 166 117 2 19 184 26 183 4.45e-11 65.1
Msa1147680 MtrunA17_Chr6g0453681 35.537 121 69 3 242 360 177 290 4.62e-11 64.7
Msa1147680 MtrunA17_Chr1g0173541 35.455 110 61 3 236 338 208 314 5.15e-11 64.3
Msa1147680 MtrunA17_Chr3g0132591 28.324 173 106 6 18 189 117 272 6.17e-11 63.9
Msa1147680 MtrunA17_Chr8g0383451 29.878 164 97 5 18 175 3 154 7.71e-11 63.9
Msa1147680 MtrunA17_Chr7g0273601 23.137 255 134 5 45 296 128 323 8.68e-11 63.9
Msa1147680 MtrunA17_Chr2g0286421 27.976 168 107 3 16 180 105 261 8.74e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1147680 AT3G25250.1 52.038 417 172 9 7 415 11 407 3.31e-133 389
Msa1147680 AT4G13000.1 56.334 371 136 7 7 375 14 360 6.16e-133 387
Msa1147680 AT3G20830.1 40.166 361 187 8 6 352 14 359 1.30e-83 262
Msa1147680 AT1G51170.1 39.402 368 192 8 8 361 17 367 3.20e-83 261
Msa1147680 AT3G12690.1 38.978 372 181 9 5 352 177 526 9.17e-77 249
Msa1147680 AT3G12690.3 38.978 372 181 9 5 352 177 526 9.17e-77 249
Msa1147680 AT3G12690.2 38.978 372 181 9 5 352 177 526 9.17e-77 249
Msa1147680 AT2G34650.1 37.637 364 196 9 8 357 70 416 6.15e-76 243
Msa1147680 AT5G03640.2 38.381 383 185 11 3 352 531 895 2.99e-74 249
Msa1147680 AT5G03640.1 38.381 383 185 11 3 352 531 895 2.99e-74 249
Msa1147680 AT1G79250.1 36.951 387 214 10 5 371 138 514 1.86e-73 240
Msa1147680 AT1G79250.3 36.951 387 214 10 5 371 138 514 1.86e-73 240
Msa1147680 AT1G79250.2 36.951 387 214 10 5 371 138 514 1.86e-73 240
Msa1147680 AT1G79250.4 36.951 387 214 10 5 371 138 514 1.86e-73 240
Msa1147680 AT1G16440.1 38.133 375 213 8 5 370 105 469 2.10e-73 238
Msa1147680 AT3G52890.2 38.564 376 190 10 7 352 532 896 3.39e-73 247
Msa1147680 AT3G52890.4 38.564 376 190 10 7 352 532 896 3.39e-73 247
Msa1147680 AT3G52890.1 38.564 376 190 10 7 352 532 896 3.39e-73 247
Msa1147680 AT3G52890.3 38.564 376 190 10 7 352 532 896 3.39e-73 247
Msa1147680 AT2G36350.1 38.235 374 192 9 7 352 553 915 7.70e-72 243
Msa1147680 AT5G40030.1 38.978 372 186 12 6 353 107 461 1.35e-71 234
Msa1147680 AT2G26700.1 31.614 446 229 9 5 384 79 514 1.93e-70 231
Msa1147680 AT5G47750.1 35.492 386 215 9 8 369 186 561 6.63e-70 231
Msa1147680 AT5G58140.6 36.134 357 178 8 1 349 565 879 1.41e-69 236
Msa1147680 AT5G58140.7 36.134 357 178 8 1 349 565 879 1.41e-69 236
Msa1147680 AT5G58140.5 36.134 357 178 8 1 349 565 879 1.41e-69 236
Msa1147680 AT5G58140.2 36.134 357 178 8 1 349 565 879 1.41e-69 236
Msa1147680 AT5G58140.1 36.134 357 178 8 1 349 565 879 1.41e-69 236
Msa1147680 AT5G55910.2 34.759 374 211 8 3 353 101 464 2.93e-69 228
Msa1147680 AT5G55910.1 34.759 374 211 8 3 353 101 464 2.93e-69 228
Msa1147680 AT4G26610.1 34.232 371 213 8 3 353 115 474 7.66e-69 227
Msa1147680 AT5G58140.3 36.599 347 170 8 1 339 565 869 1.57e-68 233
Msa1147680 AT1G53700.1 37.360 356 184 8 8 351 88 416 1.31e-66 220
Msa1147680 AT3G44610.1 35.345 348 202 6 19 343 75 422 2.23e-66 219
Msa1147680 AT3G27580.2 35.389 373 205 10 5 353 174 534 8.58e-66 220
Msa1147680 AT3G27580.1 35.389 373 205 10 5 353 174 534 8.58e-66 220
Msa1147680 AT2G44830.2 35.401 387 215 11 8 370 358 733 2.40e-64 220
Msa1147680 AT2G44830.3 35.401 387 215 11 8 370 358 733 2.40e-64 220
Msa1147680 AT2G44830.1 35.401 387 215 11 8 370 358 733 2.40e-64 220
Msa1147680 AT3G14370.1 36.080 352 191 9 8 349 83 410 2.87e-64 214
Msa1147680 AT3G45780.2 33.708 356 185 7 5 351 655 968 6.42e-63 219
Msa1147680 AT3G45780.1 33.708 356 185 7 5 351 655 968 6.42e-63 219
Msa1147680 AT1G45160.1 33.875 369 186 10 12 369 669 990 2.35e-50 183
Msa1147680 AT1G45160.2 33.512 373 190 10 8 369 665 990 3.08e-50 183
Msa1147680 AT5G62310.1 31.200 375 207 9 10 373 751 1085 1.83e-48 178
Msa1147680 AT1G48490.3 30.479 397 218 11 3 389 818 1166 7.40e-48 176
Msa1147680 AT1G48490.2 30.479 397 218 11 3 389 818 1166 7.40e-48 176
Msa1147680 AT1G48490.1 30.479 397 218 11 3 389 818 1166 7.40e-48 176
Msa1147680 AT1G48490.4 30.479 397 218 11 3 389 819 1167 7.69e-48 176
Msa1147680 AT3G17850.1 31.492 362 197 8 3 355 872 1191 1.78e-46 172
Msa1147680 AT1G30640.3 31.319 364 214 11 12 366 26 362 1.61e-42 156
Msa1147680 AT1G30640.2 31.319 364 214 11 12 366 119 455 3.56e-42 156
Msa1147680 AT1G30640.1 31.319 364 214 11 12 366 119 455 3.56e-42 156
Msa1147680 AT3G10540.1 30.599 317 156 8 42 352 72 330 8.79e-40 149
Msa1147680 AT5G09890.1 31.232 349 204 11 12 352 101 421 8.89e-40 149
Msa1147680 AT5G09890.2 31.232 349 204 11 12 352 101 421 1.04e-39 149
Msa1147680 AT3G08730.1 28.940 349 169 10 12 353 133 409 1.17e-39 148
Msa1147680 AT3G08730.2 28.940 349 169 10 12 353 133 409 1.17e-39 148
Msa1147680 AT3G08720.1 28.895 353 172 10 7 352 134 414 1.60e-39 147
Msa1147680 AT3G08720.3 28.895 353 172 10 7 352 134 414 1.60e-39 147
Msa1147680 AT3G08720.4 28.895 353 172 10 7 352 134 414 1.60e-39 147
Msa1147680 AT3G08720.2 28.895 353 172 10 7 352 134 414 1.60e-39 147
Msa1147680 AT2G20470.3 27.660 376 214 11 8 366 119 453 1.62e-38 146
Msa1147680 AT4G14350.3 28.804 368 202 12 16 364 122 448 2.96e-38 145
Msa1147680 AT2G20470.2 27.660 376 214 11 8 366 119 453 3.27e-38 145
Msa1147680 AT2G20470.1 27.660 376 214 11 8 366 119 453 3.27e-38 145
Msa1147680 AT4G14350.2 28.804 368 202 12 16 364 122 448 3.32e-38 145
Msa1147680 AT4G14350.1 28.804 368 202 12 16 364 122 448 3.32e-38 145
Msa1147680 AT4G14350.4 28.804 368 202 12 16 364 122 448 3.32e-38 145
Msa1147680 AT5G04510.2 29.217 332 170 9 42 367 71 343 1.10e-37 141
Msa1147680 AT5G04510.1 29.217 332 170 9 42 367 71 343 2.24e-37 142
Msa1147680 AT2G19400.1 28.818 347 197 11 12 339 104 419 4.91e-37 142
Msa1147680 AT1G03920.2 26.810 373 218 10 12 368 23 356 3.03e-36 138
Msa1147680 AT3G23310.1 28.610 374 197 12 16 364 123 451 3.38e-36 140
Msa1147680 AT1G03920.1 27.346 373 216 10 12 368 136 469 4.67e-36 139
Msa1147680 AT1G03920.3 27.346 373 216 10 12 368 136 469 4.67e-36 139
Msa1147680 AT4G33080.1 28.723 376 213 14 12 366 93 434 4.74e-36 139
Msa1147680 AT4G33080.2 28.723 376 213 14 12 366 93 434 5.07e-36 139
Msa1147680 AT5G04510.3 29.455 275 135 7 42 315 71 287 2.70e-31 122
Msa1147680 AT2G25090.1 26.936 297 157 6 41 335 41 279 1.32e-25 108
Msa1147680 AT2G30360.1 27.564 312 157 7 19 328 27 271 8.58e-25 106
Msa1147680 AT1G29230.1 27.273 319 161 7 19 335 80 329 9.15e-25 107
Msa1147680 AT2G25880.1 26.646 319 158 8 19 334 31 276 2.19e-24 102
Msa1147680 AT2G25880.4 26.899 316 155 8 19 331 44 286 2.53e-24 102
Msa1147680 AT2G25880.3 26.899 316 155 8 19 331 92 334 7.43e-24 102
Msa1147680 AT4G32830.1 26.332 319 159 8 19 334 37 282 8.64e-24 100
Msa1147680 AT2G34180.1 26.019 319 165 7 19 335 63 312 1.36e-22 100
Msa1147680 AT1G18350.1 23.615 343 180 9 1 335 36 304 2.65e-22 97.1
Msa1147680 AT5G18700.1 36.364 165 88 5 15 177 6 155 3.04e-21 97.4
Msa1147680 AT1G69220.1 25.076 327 170 8 16 338 252 507 6.17e-20 93.2
Msa1147680 AT1G69220.2 24.845 322 167 8 21 338 230 480 1.11e-18 89.0
Msa1147680 AT5G01820.1 26.220 328 171 8 10 335 19 277 2.55e-18 87.0
Msa1147680 AT3G29160.3 25.959 339 171 12 2 335 10 273 6.74e-18 85.1
Msa1147680 AT2G38490.1 26.603 312 158 7 19 328 34 276 8.57e-18 85.5
Msa1147680 AT3G29160.1 25.959 339 171 12 2 335 10 273 1.51e-17 85.1
Msa1147680 AT3G29160.2 25.959 339 171 12 2 335 10 273 1.51e-17 85.1
Msa1147680 AT2G45490.1 36.449 107 62 2 234 334 167 273 3.63e-17 82.0
Msa1147680 AT2G45490.1 28.111 217 137 7 12 222 21 224 4.10e-14 72.8
Msa1147680 AT1G73500.1 22.609 345 179 8 4 335 38 307 7.14e-17 81.3
Msa1147680 AT4G26070.5 23.894 339 175 9 8 335 50 316 8.72e-17 81.6
Msa1147680 AT1G09000.2 29.605 152 103 2 19 170 75 222 9.33e-17 82.8
Msa1147680 AT4G26070.2 23.894 339 175 9 8 335 63 329 9.56e-17 81.6
Msa1147680 AT4G26070.3 23.894 339 175 9 8 335 63 329 9.56e-17 81.6
Msa1147680 AT3G20860.1 22.601 323 176 8 12 331 3 254 9.66e-17 82.0
Msa1147680 AT1G54960.1 30.128 156 97 4 19 170 74 221 9.78e-17 82.8
Msa1147680 AT1G54960.2 30.128 156 97 4 19 170 74 221 9.78e-17 82.8
Msa1147680 AT1G09000.1 29.605 152 103 2 19 170 75 222 1.05e-16 82.8
Msa1147680 AT4G26070.4 23.894 339 175 9 8 335 62 328 1.21e-16 81.3
Msa1147680 AT4G18700.1 34.899 149 87 3 19 167 32 170 1.23e-16 82.4
Msa1147680 AT4G18700.1 39.394 99 58 2 239 335 183 281 4.05e-11 65.1
Msa1147680 AT5G45810.1 35.570 149 86 3 19 167 34 172 2.22e-16 81.3
Msa1147680 AT2G20050.1 37.069 116 66 3 234 342 931 1046 4.15e-16 81.3
Msa1147680 AT2G20050.2 37.069 116 66 3 234 342 928 1043 4.34e-16 81.3
Msa1147680 AT3G06030.1 31.579 152 100 2 19 170 74 221 4.65e-16 80.9
Msa1147680 AT3G44200.2 24.159 327 171 9 14 335 9 263 2.76e-15 78.6
Msa1147680 AT3G44200.1 24.159 327 171 9 14 335 9 263 2.76e-15 78.6
Msa1147680 AT5G25110.1 32.215 149 91 3 19 167 49 187 3.22e-15 77.8
Msa1147680 AT5G45820.1 29.319 191 122 5 1 189 1 180 7.29e-15 76.6
Msa1147680 AT1G54510.4 21.467 368 209 9 16 373 7 304 8.87e-15 76.6
Msa1147680 AT1G54510.2 21.467 368 209 9 16 373 7 304 8.87e-15 76.6
Msa1147680 AT1G54510.1 21.467 368 209 9 16 373 7 304 8.87e-15 76.6
Msa1147680 AT1G54510.3 21.467 368 209 9 16 373 7 304 8.87e-15 76.6
Msa1147680 AT1G53165.3 23.220 323 173 8 19 338 21 271 1.17e-14 76.6
Msa1147680 AT1G53165.1 23.220 323 173 8 19 338 21 271 1.43e-14 76.3
Msa1147680 AT1G53165.2 23.220 323 173 8 19 338 21 271 1.48e-14 76.3
Msa1147680 AT5G57630.2 30.488 164 103 4 33 195 30 183 1.72e-14 75.1
Msa1147680 AT5G01810.1 28.125 192 125 5 19 207 18 199 1.94e-14 75.1
Msa1147680 AT5G01810.2 28.125 192 125 5 19 207 18 199 1.94e-14 75.1
Msa1147680 AT5G57630.1 30.488 164 103 4 33 195 30 183 2.25e-14 75.1
Msa1147680 AT5G01810.3 29.480 173 110 4 19 189 18 180 2.30e-14 74.7
Msa1147680 AT5G58140.4 31.452 124 78 2 1 124 565 681 2.64e-14 75.5
Msa1147680 AT2G45490.2 28.111 217 137 7 12 222 21 224 2.66e-14 72.8
Msa1147680 AT2G45490.2 36.364 88 50 2 234 315 167 254 9.90e-12 65.5
Msa1147680 AT5G10930.1 33.333 129 79 2 39 167 36 157 2.68e-14 74.7
Msa1147680 AT4G26070.1 24.042 287 145 7 8 293 63 277 1.24e-13 71.6
Msa1147680 AT1G53570.6 28.571 154 101 4 19 171 220 365 1.76e-13 72.8
Msa1147680 AT1G53570.7 28.571 154 101 4 19 171 220 365 1.89e-13 72.4
Msa1147680 AT1G53570.2 28.571 154 101 4 19 171 220 365 2.22e-13 72.4
Msa1147680 AT1G53570.3 28.571 154 101 4 19 171 220 365 2.22e-13 72.4
Msa1147680 AT1G53570.1 28.571 154 101 4 19 171 220 365 2.22e-13 72.4
Msa1147680 AT1G53570.4 28.571 154 101 4 19 171 220 365 2.24e-13 72.4
Msa1147680 AT3G15220.1 23.220 323 173 8 19 338 21 271 2.30e-13 72.4
Msa1147680 AT3G01085.1 29.121 182 113 5 3 180 105 274 3.63e-13 72.0
Msa1147680 AT3G01085.2 29.121 182 113 5 3 180 105 274 3.63e-13 72.0
Msa1147680 AT3G01085.3 29.121 182 113 5 3 180 105 274 3.71e-13 71.6
Msa1147680 AT3G61960.2 28.241 216 130 7 19 223 16 217 3.73e-13 71.6
Msa1147680 AT3G61960.1 28.241 216 130 7 19 223 16 217 3.79e-13 71.6
Msa1147680 AT1G08650.1 36.190 105 62 1 236 335 170 274 8.73e-13 68.9
Msa1147680 AT4G19110.2 22.753 356 169 11 14 337 5 286 8.96e-13 70.1
Msa1147680 AT4G19110.1 22.753 356 169 11 14 337 5 286 9.46e-13 70.1
Msa1147680 AT5G39440.1 41.935 93 53 1 243 334 178 270 1.55e-12 69.7
Msa1147680 AT4G04720.2 39.604 101 55 2 241 336 241 340 1.72e-12 69.7
Msa1147680 AT4G04720.1 39.604 101 55 2 241 336 241 340 1.72e-12 69.7
Msa1147680 AT5G58950.1 27.083 144 94 3 30 167 219 357 1.82e-12 69.3
Msa1147680 AT4G04700.1 22.874 341 179 13 8 335 22 291 2.01e-12 69.3
Msa1147680 AT4G10730.1 36.000 125 65 3 225 338 192 312 2.03e-12 69.7
Msa1147680 AT1G08650.2 38.144 97 55 1 236 327 170 266 2.05e-12 67.8
Msa1147680 AT4G10730.2 36.000 125 65 3 225 338 172 292 2.35e-12 69.3
Msa1147680 AT3G07980.2 20.000 335 196 8 3 335 11 275 2.43e-12 69.7
Msa1147680 AT3G07980.1 20.000 335 196 8 3 335 11 275 2.49e-12 69.7
Msa1147680 AT1G30270.1 32.283 127 79 2 41 167 57 176 3.17e-12 68.6
Msa1147680 AT1G30270.2 32.283 127 79 2 41 167 57 176 4.00e-12 68.2
Msa1147680 AT1G53050.2 30.147 136 92 1 48 180 158 293 4.40e-12 68.6
Msa1147680 AT1G53050.1 30.147 136 92 1 48 180 158 293 4.40e-12 68.6
Msa1147680 AT4G33950.2 36.893 103 57 4 240 334 175 277 4.43e-12 67.4
Msa1147680 AT4G29810.2 31.858 113 67 2 232 334 227 339 4.69e-12 67.4
Msa1147680 AT4G29810.1 33.645 107 61 2 238 334 224 330 5.04e-12 67.4
Msa1147680 AT5G66850.2 27.273 154 104 4 19 171 352 498 5.89e-12 68.2
Msa1147680 AT5G66850.1 27.273 154 104 4 19 171 352 498 6.21e-12 68.2
Msa1147680 AT4G33950.1 36.893 103 57 4 240 334 175 277 6.64e-12 67.0
Msa1147680 AT5G58380.1 26.012 173 116 4 19 189 18 180 6.96e-12 67.4
Msa1147680 AT2G25880.2 29.703 101 68 1 237 334 144 244 7.45e-12 65.9
Msa1147680 AT3G13530.1 24.725 182 128 3 3 184 11 183 8.44e-12 67.8
Msa1147680 AT5G45430.1 23.675 283 141 9 15 296 6 214 8.81e-12 67.4
Msa1147680 AT5G45430.2 22.472 356 168 11 15 337 6 286 8.86e-12 67.4
Msa1147680 AT5G28290.3 22.812 320 170 9 14 328 5 252 1.16e-11 67.0
Msa1147680 AT5G28290.1 22.812 320 170 9 14 328 5 252 1.31e-11 67.0
Msa1147680 AT5G28290.2 22.812 320 170 9 14 328 5 252 1.31e-11 67.0
Msa1147680 AT5G07070.1 27.746 173 113 4 19 189 18 180 1.35e-11 66.6
Msa1147680 AT3G04810.2 30.061 163 101 5 12 171 3 155 1.89e-11 66.2
Msa1147680 AT3G04810.1 30.061 163 101 5 12 171 3 155 1.89e-11 66.2
Msa1147680 AT3G04810.3 30.061 163 101 5 12 171 3 155 1.89e-11 66.2
Msa1147680 AT4G21940.3 33.824 136 78 4 212 336 228 362 1.90e-11 66.2
Msa1147680 AT4G04740.2 39.000 100 55 2 242 336 231 329 1.93e-11 66.2
Msa1147680 AT4G14580.1 26.667 180 120 5 19 195 27 197 1.97e-11 65.9
Msa1147680 AT4G24100.4 34.400 125 67 3 225 338 194 314 1.98e-11 66.6
Msa1147680 AT4G30960.1 30.769 104 69 1 64 167 68 168 2.15e-11 65.9
Msa1147680 AT4G24100.3 34.400 125 67 3 225 338 194 314 2.17e-11 66.2
Msa1147680 AT4G04740.4 39.000 100 55 2 242 336 231 329 2.22e-11 66.2
Msa1147680 AT4G04740.6 39.000 100 55 2 242 336 231 329 2.22e-11 66.2
Msa1147680 AT4G04740.5 39.000 100 55 2 242 336 231 329 2.22e-11 66.2
Msa1147680 AT4G04740.3 39.000 100 55 2 242 336 231 329 2.22e-11 66.2
Msa1147680 AT4G04740.1 39.000 100 55 2 242 336 231 329 2.22e-11 66.2
Msa1147680 AT4G04740.7 39.000 100 55 2 242 336 231 329 2.22e-11 66.2
Msa1147680 AT4G24100.1 34.400 125 67 3 225 338 178 298 2.34e-11 66.2
Msa1147680 AT2G26980.1 29.333 150 97 3 18 167 19 159 2.38e-11 65.5
Msa1147680 AT4G24100.2 34.400 125 67 3 225 338 178 298 2.41e-11 66.2
Msa1147680 AT4G21940.1 33.824 136 78 4 212 336 228 362 2.42e-11 65.9
Msa1147680 AT4G21940.2 33.824 136 78 4 212 336 228 362 2.42e-11 65.9
Msa1147680 AT2G26980.4 29.333 150 97 3 18 167 29 169 2.55e-11 65.9
Msa1147680 AT2G26980.3 29.333 150 97 3 18 167 19 159 2.60e-11 65.5
Msa1147680 AT1G79640.1 34.400 125 67 3 225 338 158 278 3.60e-11 65.5
Msa1147680 AT2G26980.5 27.222 180 120 4 18 195 19 189 3.65e-11 65.1
Msa1147680 AT1G79640.2 34.400 125 67 3 225 338 158 278 3.65e-11 65.5
Msa1147680 AT1G79640.4 34.400 125 67 3 225 338 158 278 3.65e-11 65.5
Msa1147680 AT1G79640.3 34.400 125 67 3 225 338 158 278 3.65e-11 65.5
Msa1147680 AT1G79640.5 34.400 125 67 3 225 338 161 281 3.72e-11 65.5
Msa1147680 AT1G79640.6 34.400 125 67 3 225 338 158 278 3.72e-11 65.5
Msa1147680 AT5G14720.1 32.800 125 69 3 225 338 161 281 4.33e-11 65.5
Msa1147680 AT5G14720.2 32.800 125 69 3 225 338 161 281 4.33e-11 65.5
Msa1147680 AT5G21326.1 30.233 129 83 2 39 167 37 158 4.33e-11 65.1
Msa1147680 AT1G63700.1 26.752 157 106 4 19 174 406 554 4.35e-11 65.5
Msa1147680 AT1G63700.2 26.752 157 106 4 19 174 406 554 4.35e-11 65.5
Msa1147680 AT2G26980.2 27.222 180 120 4 18 195 19 189 4.42e-11 63.5
Msa1147680 AT5G39420.1 25.281 178 125 2 3 180 95 264 5.31e-11 65.1
Msa1147680 AT4G40010.1 37.864 103 56 3 240 334 158 260 6.49e-11 63.9
Msa1147680 AT3G23000.1 27.933 179 119 4 19 196 31 200 7.13e-11 64.3
Msa1147680 AT3G04530.1 32.710 107 67 1 236 337 166 272 8.35e-11 62.8

Find 81 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAACGAGTTTGGTGATTT+TGG 0.068028 7_4:+27045894 None:intergenic
TTTCAAACTGAAAAGCTTAT+TGG 0.148224 7_4:-27046789 Msa1147680:CDS
CCTCTCTTGCCTAGGTTTAA+AGG 0.151835 7_4:-27046816 Msa1147680:CDS
AAAGGTCATGATTTCTTTAA+AGG 0.154605 7_4:-27045423 Msa1147680:CDS
TTAGGGAATGGACATAATTT+TGG 0.205600 7_4:-27045648 Msa1147680:CDS
GTGGCACCTGAAGTTATATT+AGG 0.227326 7_4:-27045666 Msa1147680:CDS
TTCCTATTTGGACTACTAAA+TGG 0.234969 7_4:+27045570 None:intergenic
TTGGAGTATCTACACAATTT+AGG 0.242514 7_4:-27046011 Msa1147680:CDS
TGACTCAATGATTCGAATTT+CGG 0.250650 7_4:+27045771 None:intergenic
TGAAACGTTTCTTTCCTATT+TGG 0.264378 7_4:+27045558 None:intergenic
ATATCAACTCGGTTTGTAAA+AGG 0.338049 7_4:-27045743 Msa1147680:CDS
TGTTTCGCCGCCGTGATTCA+TGG 0.360362 7_4:+27047049 None:intergenic
ACTTCATTCTGTGGAATATA+CGG 0.360417 7_4:+27045363 None:intergenic
ATTGAAGTTGATGAAATAAA+AGG 0.362935 7_4:-27045441 Msa1147680:CDS
AACAATGGAGGTTGAACAAA+AGG 0.379746 7_4:-27045526 Msa1147680:CDS
TGGCACCTGAAGTTATATTA+GGG 0.404506 7_4:-27045665 Msa1147680:CDS
CGCCATTTAGTAGTCCAAAT+AGG 0.409374 7_4:-27045572 Msa1147680:CDS
GGTGTTGATTGGTGGTCATT+TGG 0.413313 7_4:-27045627 Msa1147680:CDS
TACTCTTGTAATTCCTATGT+TGG 0.418782 7_4:-27045798 Msa1147680:CDS
ACTCTTGTAATTCCTATGTT+GGG 0.423530 7_4:-27045797 Msa1147680:CDS
TTGGATTTAATTTCTTTGAC+AGG 0.428153 7_4:+27045913 None:intergenic
TTTGCAATCAAATCCTTCAA+TGG 0.435215 7_4:+27045492 None:intergenic
GAGTTGGAACTCAACGAGTT+TGG 0.437507 7_4:+27045885 None:intergenic
GAATATCATGATTCAACAAA+CGG 0.443299 7_4:-27045961 Msa1147680:CDS
CCATTCCCTAATATAACTTC+AGG 0.445354 7_4:+27045660 None:intergenic
CGCCGTCGGTCGTGGCGCAA+AGG 0.449924 7_4:-27046997 Msa1147680:CDS
TTGATCATCCTCTCTTGCCT+AGG 0.457608 7_4:-27046824 Msa1147680:CDS
GCCGTCGGTCGTGGCGCAAA+GGG 0.465289 7_4:-27046996 Msa1147680:CDS
GATGTTGAGTCCTTTGTACA+TGG 0.471736 7_4:-27045312 Msa1147680:CDS
GGGTGAATCAACACCATTGA+AGG 0.473130 7_4:-27045505 Msa1147680:CDS
GAATCACGGCGGCGAAACAT+TGG 0.475611 7_4:-27047045 Msa1147680:CDS
AATGAAGTTGAGGACAAAGC+TGG 0.476617 7_4:-27045348 Msa1147680:CDS
GTTGAGTCAGACTCAAACTA+AGG 0.480419 7_4:-27045169 Msa1147680:CDS
TTTGCTATTGATTATTGTCA+TGG 0.483556 7_4:-27046765 Msa1147680:CDS
TGTTGAATCATGATATTCTC+CGG 0.486087 7_4:+27045966 None:intergenic
TGAAAAGCTCCTTTAAACCT+AGG 0.487325 7_4:+27046807 None:intergenic
AATTCTCTGAAGAAACAATC+AGG 0.495961 7_4:-27046701 Msa1147680:intron
ATCAACTTCAATCCTACGAT+CGG 0.496191 7_4:+27045452 None:intergenic
GAAAGAATGGTGAATGCAAA+AGG 0.496992 7_4:-27046878 Msa1147680:CDS
ACCCTTTGCGCCACGACCGA+CGG 0.506004 7_4:+27046995 None:intergenic
TTGAGTTCCAACTCGTCACC+AGG 0.506257 7_4:-27045876 Msa1147680:CDS
TAAAGGTGTGAAGTGGAATA+CGG 0.506683 7_4:-27045406 Msa1147680:CDS
AATATCATGATTCAACAAAC+GGG 0.508992 7_4:-27045960 Msa1147680:CDS
TTGTCCTCAACTTCATTCTG+TGG 0.514095 7_4:+27045354 None:intergenic
TTTCGTATTTGGTGGTGAGT+TGG 0.528298 7_4:+27045851 None:intergenic
AGTTTATAGAGATTTGAAGC+CGG 0.530086 7_4:-27045985 Msa1147680:CDS
CGTGATTCATGGCAGAGGTA+AGG 0.535148 7_4:+27047060 None:intergenic
AGAGGGGAATGAGAAGGAGA+AGG 0.537837 7_4:-27045226 Msa1147680:CDS
ATGATAATAATAAGAATGTG+TGG 0.538450 7_4:-27045200 Msa1147680:CDS
GTGTTTCTTTCAAGAACCTA+CGG 0.544643 7_4:-27046969 Msa1147680:CDS
TGAAAAGTCAAACTCGTTCG+TGG 0.546520 7_4:-27045703 Msa1147680:CDS
CCTTTAAACCTAGGCAAGAG+AGG 0.548188 7_4:+27046816 None:intergenic
GAATTTCGGTTTCCCAACAT+AGG 0.548693 7_4:+27045785 None:intergenic
ATTTCTTTAAAGGTGTGAAG+TGG 0.552950 7_4:-27045413 Msa1147680:CDS
TTTGGTGGTGAGTTGGAACC+TGG 0.553367 7_4:+27045858 None:intergenic
TCAACTTCAATCCTACGATC+GGG 0.554072 7_4:+27045453 None:intergenic
CCTGAAGTTATATTAGGGAA+TGG 0.555674 7_4:-27045660 Msa1147680:CDS
CTATTGATTATTGTCATGGT+GGG 0.561164 7_4:-27046761 Msa1147680:CDS
ATCATCGAAAGAAGAATGGT+TGG 0.568810 7_4:-27046946 Msa1147680:CDS
AAAAGAAGAGGGGAATGAGA+AGG 0.572565 7_4:-27045232 Msa1147680:CDS
TTCTTCTTTCGATGATCCGT+AGG 0.576905 7_4:+27046953 None:intergenic
ACAATGGAGGTTGAACAAAA+GGG 0.583595 7_4:-27045525 Msa1147680:CDS
ATGAAGTTGAGGACAAAGCT+GGG 0.586430 7_4:-27045347 Msa1147680:CDS
CTTACCTCTGCCATGAATCA+CGG 0.586868 7_4:-27047059 Msa1147680:exon
CGTGGAATTGGTGTTAGCAT+TGG 0.588776 7_4:-27046030 Msa1147680:CDS
ACGGATCATCGAAAGAAGAA+TGG 0.592361 7_4:-27046950 Msa1147680:CDS
GAAAAGTCAAACTCGTTCGT+GGG 0.611855 7_4:-27045702 Msa1147680:CDS
GTTGGAACCTGGTGACGAGT+TGG 0.630791 7_4:+27045869 None:intergenic
TATTCCACAGAATGAAGTTG+AGG 0.632677 7_4:-27045358 Msa1147680:CDS
AATACGGTTTCGGAGGTACG+AGG 0.633706 7_4:-27047086 Msa1147680:five_prime_UTR
CGTGGGAACTGAGGATTACG+TGG 0.637947 7_4:-27045685 Msa1147680:CDS
CTTTGCGCCACGACCGACGG+CGG 0.638099 7_4:+27046998 None:intergenic
AAAGAATGGTGAATGCAAAA+GGG 0.638261 7_4:-27046877 Msa1147680:CDS
GCTATTGATTATTGTCATGG+TGG 0.639438 7_4:-27046762 Msa1147680:CDS
CAATGCTAACACCAATTCCA+CGG 0.640259 7_4:+27046031 None:intergenic
TTGAGAAAGATCCCGATCGT+AGG 0.641636 7_4:-27045464 Msa1147680:CDS
AAACTCGTTCGTGGGAACTG+AGG 0.645067 7_4:-27045694 Msa1147680:CDS
TGATAATAATAAGAATGTGT+GGG 0.668196 7_4:-27045199 Msa1147680:CDS
GAGTCAAATCGATATCAACT+CGG 0.670362 7_4:-27045754 Msa1147680:CDS
TCATTCTGTGGAATATACGG+TGG 0.687121 7_4:+27045366 None:intergenic
ACCTCTGCCATGAATCACGG+CGG 0.774611 7_4:-27047056 Msa1147680:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAAAATTTACAAAACT+GGG + chr7_4:27045638-27045657 None:intergenic 10.0%
!! ATATTAAAAATTTACAAAAC+TGG + chr7_4:27045639-27045658 None:intergenic 10.0%
!!! AGTTTTGTAAATTTTTAATA+TGG - chr7_4:27045638-27045657 Msa1147680:CDS 10.0%
!!! AATAATTTTTTAGATTTTTG+TGG - chr7_4:27045999-27046018 Msa1147680:CDS 10.0%
!! TATTAAAAATTTACAAAACT+GGG + chr7_4:27045638-27045657 None:intergenic 10.0%
!! ATATTAAAAATTTACAAAAC+TGG + chr7_4:27045639-27045658 None:intergenic 10.0%
!!! AGTTTTGTAAATTTTTAATA+TGG - chr7_4:27045638-27045657 Msa1147680:CDS 10.0%
!!! AATAATTTTTTAGATTTTTG+TGG - chr7_4:27045999-27046018 Msa1147680:CDS 10.0%
!!! AGAAGAAATTTCAAAATTTT+CGG - chr7_4:27046106-27046125 Msa1147680:intron 15.0%
!!! AGAAGAAATTTCAAAATTTT+CGG - chr7_4:27046106-27046125 Msa1147680:intron 15.0%
!!! CAACAACAAAATATTTTTCT+AGG + chr7_4:27045711-27045730 None:intergenic 20.0%
!! TTATAGAAAACGCATTAAAA+CGG + chr7_4:27045744-27045763 None:intergenic 20.0%
!!! TTTTTCTTTTTCTTTTGTGA+AGG - chr7_4:27046183-27046202 Msa1147680:intron 20.0%
!!! ATTGAAGTTGATGAAATAAA+AGG - chr7_4:27046803-27046822 Msa1147680:CDS 20.0%
!! AAAAAATATTCCATGTACAA+AGG + chr7_4:27046945-27046964 None:intergenic 20.0%
!!! TCACTCTTATTTTTATTCTT+TGG + chr7_4:27046968-27046987 None:intergenic 20.0%
!! ATGATAATAATAAGAATGTG+TGG - chr7_4:27047044-27047063 Msa1147680:CDS 20.0%
!! TGATAATAATAAGAATGTGT+GGG - chr7_4:27047045-27047064 Msa1147680:CDS 20.0%
!!! CAACAACAAAATATTTTTCT+AGG + chr7_4:27045711-27045730 None:intergenic 20.0%
!! TTATAGAAAACGCATTAAAA+CGG + chr7_4:27045744-27045763 None:intergenic 20.0%
!!! TTTTTCTTTTTCTTTTGTGA+AGG - chr7_4:27046183-27046202 Msa1147680:intron 20.0%
!!! ATTGAAGTTGATGAAATAAA+AGG - chr7_4:27046803-27046822 Msa1147680:CDS 20.0%
!! AAAAAATATTCCATGTACAA+AGG + chr7_4:27046945-27046964 None:intergenic 20.0%
!!! TCACTCTTATTTTTATTCTT+TGG + chr7_4:27046968-27046987 None:intergenic 20.0%
!! ATGATAATAATAAGAATGTG+TGG - chr7_4:27047044-27047063 Msa1147680:CDS 20.0%
!! TGATAATAATAAGAATGTGT+GGG - chr7_4:27047045-27047064 Msa1147680:CDS 20.0%
!!! CGGATAAAATTTTAAGGTTT+CGG + chr7_4:27045229-27045248 None:intergenic 25.0%
!!! CTTCTTTTGAGGAAAAATAA+TGG - chr7_4:27045344-27045363 Msa1147680:CDS 25.0%
!! AGGAAAAATAATGGAAAGAA+TGG - chr7_4:27045353-27045372 Msa1147680:CDS 25.0%
! TTTCAAACTGAAAAGCTTAT+TGG - chr7_4:27045455-27045474 Msa1147680:CDS 25.0%
!!! TTTGCTATTGATTATTGTCA+TGG - chr7_4:27045479-27045498 Msa1147680:CDS 25.0%
!! AAATATTTTTCTAGGTGGTT+CGG + chr7_4:27045703-27045722 None:intergenic 25.0%
!! CAACAAAATATTTTTCTAGG+TGG + chr7_4:27045708-27045727 None:intergenic 25.0%
! ATTAAAATGAGTCTAGAAGA+TGG - chr7_4:27045770-27045789 Msa1147680:CDS 25.0%
!!! CTATACAAAATTTTGTTGTG+TGG - chr7_4:27045870-27045889 Msa1147680:CDS 25.0%
! GAATATCATGATTCAACAAA+CGG - chr7_4:27046283-27046302 Msa1147680:intron 25.0%
! AATATCATGATTCAACAAAC+GGG - chr7_4:27046284-27046303 Msa1147680:intron 25.0%
!! TTGGATTTAATTTCTTTGAC+AGG + chr7_4:27046334-27046353 None:intergenic 25.0%
!!! GTTTTGTATGAGTTGTTTTA+TGG - chr7_4:27046644-27046663 Msa1147680:intron 25.0%
!!! GTTTCACAAGATTTTAACAA+TGG - chr7_4:27046703-27046722 Msa1147680:CDS 25.0%
! AAAGGTCATGATTTCTTTAA+AGG - chr7_4:27046821-27046840 Msa1147680:CDS 25.0%
! TGAGAAAGAGAAAAATAATG+AGG - chr7_4:27046985-27047004 Msa1147680:CDS 25.0%
! TAATGAGGTAAAAAAAGAAG+AGG - chr7_4:27047000-27047019 Msa1147680:CDS 25.0%
! AATGAGGTAAAAAAAGAAGA+GGG - chr7_4:27047001-27047020 Msa1147680:CDS 25.0%
!!! CGGATAAAATTTTAAGGTTT+CGG + chr7_4:27045229-27045248 None:intergenic 25.0%
!!! CTTCTTTTGAGGAAAAATAA+TGG - chr7_4:27045344-27045363 Msa1147680:CDS 25.0%
!! AGGAAAAATAATGGAAAGAA+TGG - chr7_4:27045353-27045372 Msa1147680:CDS 25.0%
! TTTCAAACTGAAAAGCTTAT+TGG - chr7_4:27045455-27045474 Msa1147680:CDS 25.0%
!!! TTTGCTATTGATTATTGTCA+TGG - chr7_4:27045479-27045498 Msa1147680:CDS 25.0%
!! AAATATTTTTCTAGGTGGTT+CGG + chr7_4:27045703-27045722 None:intergenic 25.0%
!! CAACAAAATATTTTTCTAGG+TGG + chr7_4:27045708-27045727 None:intergenic 25.0%
! ATTAAAATGAGTCTAGAAGA+TGG - chr7_4:27045770-27045789 Msa1147680:CDS 25.0%
!!! CTATACAAAATTTTGTTGTG+TGG - chr7_4:27045870-27045889 Msa1147680:CDS 25.0%
! GAATATCATGATTCAACAAA+CGG - chr7_4:27046283-27046302 Msa1147680:intron 25.0%
! AATATCATGATTCAACAAAC+GGG - chr7_4:27046284-27046303 Msa1147680:intron 25.0%
!! TTGGATTTAATTTCTTTGAC+AGG + chr7_4:27046334-27046353 None:intergenic 25.0%
!!! GTTTTGTATGAGTTGTTTTA+TGG - chr7_4:27046644-27046663 Msa1147680:intron 25.0%
!!! GTTTCACAAGATTTTAACAA+TGG - chr7_4:27046703-27046722 Msa1147680:CDS 25.0%
! AAAGGTCATGATTTCTTTAA+AGG - chr7_4:27046821-27046840 Msa1147680:CDS 25.0%
! TGAGAAAGAGAAAAATAATG+AGG - chr7_4:27046985-27047004 Msa1147680:CDS 25.0%
! TAATGAGGTAAAAAAAGAAG+AGG - chr7_4:27047000-27047019 Msa1147680:CDS 25.0%
! AATGAGGTAAAAAAAGAAGA+GGG - chr7_4:27047001-27047020 Msa1147680:CDS 25.0%
! TATCTAAAGAGCTTCTTTTG+AGG - chr7_4:27045333-27045352 Msa1147680:CDS 30.0%
AAAGAATGGTGAATGCAAAA+GGG - chr7_4:27045367-27045386 Msa1147680:CDS 30.0%
! CTATTGATTATTGTCATGGT+GGG - chr7_4:27045483-27045502 Msa1147680:CDS 30.0%
!!! TCTTCAGAGAATTTTTTCTC+AGG + chr7_4:27045536-27045555 None:intergenic 30.0%
! AATTCTCTGAAGAAACAATC+AGG - chr7_4:27045543-27045562 Msa1147680:CDS 30.0%
GAAGATTGATGTGAACAATT+AGG + chr7_4:27045802-27045821 None:intergenic 30.0%
! TTGATTCCTGATGTCAATTT+TGG - chr7_4:27045838-27045857 Msa1147680:CDS 30.0%
AACAATCATGATTTGAGAGA+TGG - chr7_4:27046054-27046073 Msa1147680:intron 30.0%
ACAATCATGATTTGAGAGAT+GGG - chr7_4:27046055-27046074 Msa1147680:intron 30.0%
! TTGGAGTATCTACACAATTT+AGG - chr7_4:27046233-27046252 Msa1147680:intron 30.0%
! AGTTTATAGAGATTTGAAGC+CGG - chr7_4:27046259-27046278 Msa1147680:intron 30.0%
TGTTGAATCATGATATTCTC+CGG + chr7_4:27046281-27046300 None:intergenic 30.0%
!! TTCCTTCTGTTTTTCGTATT+TGG + chr7_4:27046407-27046426 None:intergenic 30.0%
TACTCTTGTAATTCCTATGT+TGG - chr7_4:27046446-27046465 Msa1147680:intron 30.0%
ACTCTTGTAATTCCTATGTT+GGG - chr7_4:27046447-27046466 Msa1147680:intron 30.0%
TGACTCAATGATTCGAATTT+CGG + chr7_4:27046476-27046495 None:intergenic 30.0%
! ATATCAACTCGGTTTGTAAA+AGG - chr7_4:27046501-27046520 Msa1147680:intron 30.0%
! TTAGGGAATGGACATAATTT+TGG - chr7_4:27046596-27046615 Msa1147680:intron 30.0%
!!! GACATAATTTTGGTGTTGAT+TGG - chr7_4:27046606-27046625 Msa1147680:intron 30.0%
!!! ATAATTTTGGTGTTGATTGG+TGG - chr7_4:27046609-27046628 Msa1147680:intron 30.0%
TTCCTATTTGGACTACTAAA+TGG + chr7_4:27046677-27046696 None:intergenic 30.0%
TGAAACGTTTCTTTCCTATT+TGG + chr7_4:27046689-27046708 None:intergenic 30.0%
!! TCACAAGATTTTAACAATGG+AGG - chr7_4:27046706-27046725 Msa1147680:CDS 30.0%
TTTGCAATCAAATCCTTCAA+TGG + chr7_4:27046755-27046774 None:intergenic 30.0%
! ATTTCTTTAAAGGTGTGAAG+TGG - chr7_4:27046831-27046850 Msa1147680:CDS 30.0%
ACTTCATTCTGTGGAATATA+CGG + chr7_4:27046884-27046903 None:intergenic 30.0%
ATGAGGTAAAAAAAGAAGAG+GGG - chr7_4:27047002-27047021 Msa1147680:CDS 30.0%
! TATCTAAAGAGCTTCTTTTG+AGG - chr7_4:27045333-27045352 Msa1147680:CDS 30.0%
AAAGAATGGTGAATGCAAAA+GGG - chr7_4:27045367-27045386 Msa1147680:CDS 30.0%
! CTATTGATTATTGTCATGGT+GGG - chr7_4:27045483-27045502 Msa1147680:CDS 30.0%
!!! TCTTCAGAGAATTTTTTCTC+AGG + chr7_4:27045536-27045555 None:intergenic 30.0%
! AATTCTCTGAAGAAACAATC+AGG - chr7_4:27045543-27045562 Msa1147680:CDS 30.0%
GAAGATTGATGTGAACAATT+AGG + chr7_4:27045802-27045821 None:intergenic 30.0%
! TTGATTCCTGATGTCAATTT+TGG - chr7_4:27045838-27045857 Msa1147680:CDS 30.0%
AACAATCATGATTTGAGAGA+TGG - chr7_4:27046054-27046073 Msa1147680:intron 30.0%
ACAATCATGATTTGAGAGAT+GGG - chr7_4:27046055-27046074 Msa1147680:intron 30.0%
! TTGGAGTATCTACACAATTT+AGG - chr7_4:27046233-27046252 Msa1147680:intron 30.0%
! AGTTTATAGAGATTTGAAGC+CGG - chr7_4:27046259-27046278 Msa1147680:intron 30.0%
TGTTGAATCATGATATTCTC+CGG + chr7_4:27046281-27046300 None:intergenic 30.0%
!! TTCCTTCTGTTTTTCGTATT+TGG + chr7_4:27046407-27046426 None:intergenic 30.0%
TACTCTTGTAATTCCTATGT+TGG - chr7_4:27046446-27046465 Msa1147680:intron 30.0%
ACTCTTGTAATTCCTATGTT+GGG - chr7_4:27046447-27046466 Msa1147680:intron 30.0%
TGACTCAATGATTCGAATTT+CGG + chr7_4:27046476-27046495 None:intergenic 30.0%
! ATATCAACTCGGTTTGTAAA+AGG - chr7_4:27046501-27046520 Msa1147680:intron 30.0%
! TTAGGGAATGGACATAATTT+TGG - chr7_4:27046596-27046615 Msa1147680:intron 30.0%
!!! GACATAATTTTGGTGTTGAT+TGG - chr7_4:27046606-27046625 Msa1147680:intron 30.0%
!!! ATAATTTTGGTGTTGATTGG+TGG - chr7_4:27046609-27046628 Msa1147680:intron 30.0%
TTCCTATTTGGACTACTAAA+TGG + chr7_4:27046677-27046696 None:intergenic 30.0%
TGAAACGTTTCTTTCCTATT+TGG + chr7_4:27046689-27046708 None:intergenic 30.0%
!! TCACAAGATTTTAACAATGG+AGG - chr7_4:27046706-27046725 Msa1147680:CDS 30.0%
TTTGCAATCAAATCCTTCAA+TGG + chr7_4:27046755-27046774 None:intergenic 30.0%
! ATTTCTTTAAAGGTGTGAAG+TGG - chr7_4:27046831-27046850 Msa1147680:CDS 30.0%
ACTTCATTCTGTGGAATATA+CGG + chr7_4:27046884-27046903 None:intergenic 30.0%
ATGAGGTAAAAAAAGAAGAG+GGG - chr7_4:27047002-27047021 Msa1147680:CDS 30.0%
! CTTAAAATTTTATCCGCCGT+CGG - chr7_4:27045233-27045252 Msa1147680:CDS 35.0%
GTGTTTCTTTCAAGAACCTA+CGG - chr7_4:27045275-27045294 Msa1147680:CDS 35.0%
ATCATCGAAAGAAGAATGGT+TGG - chr7_4:27045298-27045317 Msa1147680:CDS 35.0%
GAAAGAATGGTGAATGCAAA+AGG - chr7_4:27045366-27045385 Msa1147680:CDS 35.0%
TGAAAAGCTCCTTTAAACCT+AGG + chr7_4:27045440-27045459 None:intergenic 35.0%
! GCTATTGATTATTGTCATGG+TGG - chr7_4:27045482-27045501 Msa1147680:CDS 35.0%
!! TTCCTGATGTCAATTTTGGT+CGG - chr7_4:27045842-27045861 Msa1147680:CDS 35.0%
!! CTTCTGTTTTTCGTATTTGG+TGG + chr7_4:27046404-27046423 None:intergenic 35.0%
CACCAAATACGAAAAACAGA+AGG - chr7_4:27046402-27046421 Msa1147680:intron 35.0%
GAGTCAAATCGATATCAACT+CGG - chr7_4:27046490-27046509 Msa1147680:intron 35.0%
TGGCACCTGAAGTTATATTA+GGG - chr7_4:27046579-27046598 Msa1147680:intron 35.0%
CCATTCCCTAATATAACTTC+AGG + chr7_4:27046587-27046606 None:intergenic 35.0%
CCTGAAGTTATATTAGGGAA+TGG - chr7_4:27046584-27046603 Msa1147680:intron 35.0%
AACAATGGAGGTTGAACAAA+AGG - chr7_4:27046718-27046737 Msa1147680:CDS 35.0%
ACAATGGAGGTTGAACAAAA+GGG - chr7_4:27046719-27046738 Msa1147680:CDS 35.0%
ATCAACTTCAATCCTACGAT+CGG + chr7_4:27046795-27046814 None:intergenic 35.0%
! TAAAGGTGTGAAGTGGAATA+CGG - chr7_4:27046838-27046857 Msa1147680:CDS 35.0%
TATTCCACAGAATGAAGTTG+AGG - chr7_4:27046886-27046905 Msa1147680:CDS 35.0%
! CTTAAAATTTTATCCGCCGT+CGG - chr7_4:27045233-27045252 Msa1147680:CDS 35.0%
GTGTTTCTTTCAAGAACCTA+CGG - chr7_4:27045275-27045294 Msa1147680:CDS 35.0%
ATCATCGAAAGAAGAATGGT+TGG - chr7_4:27045298-27045317 Msa1147680:CDS 35.0%
GAAAGAATGGTGAATGCAAA+AGG - chr7_4:27045366-27045385 Msa1147680:CDS 35.0%
TGAAAAGCTCCTTTAAACCT+AGG + chr7_4:27045440-27045459 None:intergenic 35.0%
! GCTATTGATTATTGTCATGG+TGG - chr7_4:27045482-27045501 Msa1147680:CDS 35.0%
!! TTCCTGATGTCAATTTTGGT+CGG - chr7_4:27045842-27045861 Msa1147680:CDS 35.0%
!! CTTCTGTTTTTCGTATTTGG+TGG + chr7_4:27046404-27046423 None:intergenic 35.0%
CACCAAATACGAAAAACAGA+AGG - chr7_4:27046402-27046421 Msa1147680:intron 35.0%
GAGTCAAATCGATATCAACT+CGG - chr7_4:27046490-27046509 Msa1147680:intron 35.0%
TGGCACCTGAAGTTATATTA+GGG - chr7_4:27046579-27046598 Msa1147680:intron 35.0%
CCATTCCCTAATATAACTTC+AGG + chr7_4:27046587-27046606 None:intergenic 35.0%
CCTGAAGTTATATTAGGGAA+TGG - chr7_4:27046584-27046603 Msa1147680:intron 35.0%
AACAATGGAGGTTGAACAAA+AGG - chr7_4:27046718-27046737 Msa1147680:CDS 35.0%
ACAATGGAGGTTGAACAAAA+GGG - chr7_4:27046719-27046738 Msa1147680:CDS 35.0%
ATCAACTTCAATCCTACGAT+CGG + chr7_4:27046795-27046814 None:intergenic 35.0%
! TAAAGGTGTGAAGTGGAATA+CGG - chr7_4:27046838-27046857 Msa1147680:CDS 35.0%
TATTCCACAGAATGAAGTTG+AGG - chr7_4:27046886-27046905 Msa1147680:CDS 35.0%
! CGACGGCGGATAAAATTTTA+AGG + chr7_4:27045235-27045254 None:intergenic 40.0%
TTCTTCTTTCGATGATCCGT+AGG + chr7_4:27045294-27045313 None:intergenic 40.0%
ACGGATCATCGAAAGAAGAA+TGG - chr7_4:27045294-27045313 Msa1147680:CDS 40.0%
TTGACATCAGGAATCAAGCT+CGG + chr7_4:27045835-27045854 None:intergenic 40.0%
AACCGACCAAAATTGACATC+AGG + chr7_4:27045847-27045866 None:intergenic 40.0%
! CTCTTCGATTTGTCAGTTTC+TGG - chr7_4:27045918-27045937 Msa1147680:CDS 40.0%
!! TTTGTGAAGGTTTTATGCCG+TGG - chr7_4:27046196-27046215 Msa1147680:intron 40.0%
!! AAGGTTTTATGCCGTGGAAT+TGG - chr7_4:27046202-27046221 Msa1147680:intron 40.0%
CAATGCTAACACCAATTCCA+CGG + chr7_4:27046216-27046235 None:intergenic 40.0%
!! CTCAACGAGTTTGGTGATTT+TGG + chr7_4:27046353-27046372 None:intergenic 40.0%
!! TTTCGTATTTGGTGGTGAGT+TGG + chr7_4:27046396-27046415 None:intergenic 40.0%
CGAAAAACAGAAGGAAGAGA+TGG - chr7_4:27046411-27046430 Msa1147680:intron 40.0%
GAATTTCGGTTTCCCAACAT+AGG + chr7_4:27046462-27046481 None:intergenic 40.0%
TGAAAAGTCAAACTCGTTCG+TGG - chr7_4:27046541-27046560 Msa1147680:intron 40.0%
GAAAAGTCAAACTCGTTCGT+GGG - chr7_4:27046542-27046561 Msa1147680:intron 40.0%
GTGGCACCTGAAGTTATATT+AGG - chr7_4:27046578-27046597 Msa1147680:intron 40.0%
CGCCATTTAGTAGTCCAAAT+AGG - chr7_4:27046672-27046691 Msa1147680:intron 40.0%
TCAACTTCAATCCTACGATC+GGG + chr7_4:27046794-27046813 None:intergenic 40.0%
TCATTCTGTGGAATATACGG+TGG + chr7_4:27046881-27046900 None:intergenic 40.0%
TTGTCCTCAACTTCATTCTG+TGG + chr7_4:27046893-27046912 None:intergenic 40.0%
AATGAAGTTGAGGACAAAGC+TGG - chr7_4:27046896-27046915 Msa1147680:CDS 40.0%
ATGAAGTTGAGGACAAAGCT+GGG - chr7_4:27046897-27046916 Msa1147680:CDS 40.0%
GATGTTGAGTCCTTTGTACA+TGG - chr7_4:27046932-27046951 Msa1147680:CDS 40.0%
AAAAGAAGAGGGGAATGAGA+AGG - chr7_4:27047012-27047031 Msa1147680:CDS 40.0%
GTTGAGTCAGACTCAAACTA+AGG - chr7_4:27047075-27047094 Msa1147680:five_prime_UTR 40.0%
! CGACGGCGGATAAAATTTTA+AGG + chr7_4:27045235-27045254 None:intergenic 40.0%
TTCTTCTTTCGATGATCCGT+AGG + chr7_4:27045294-27045313 None:intergenic 40.0%
ACGGATCATCGAAAGAAGAA+TGG - chr7_4:27045294-27045313 Msa1147680:CDS 40.0%
TTGACATCAGGAATCAAGCT+CGG + chr7_4:27045835-27045854 None:intergenic 40.0%
AACCGACCAAAATTGACATC+AGG + chr7_4:27045847-27045866 None:intergenic 40.0%
! CTCTTCGATTTGTCAGTTTC+TGG - chr7_4:27045918-27045937 Msa1147680:CDS 40.0%
!! TTTGTGAAGGTTTTATGCCG+TGG - chr7_4:27046196-27046215 Msa1147680:intron 40.0%
!! AAGGTTTTATGCCGTGGAAT+TGG - chr7_4:27046202-27046221 Msa1147680:intron 40.0%
CAATGCTAACACCAATTCCA+CGG + chr7_4:27046216-27046235 None:intergenic 40.0%
!! CTCAACGAGTTTGGTGATTT+TGG + chr7_4:27046353-27046372 None:intergenic 40.0%
!! TTTCGTATTTGGTGGTGAGT+TGG + chr7_4:27046396-27046415 None:intergenic 40.0%
CGAAAAACAGAAGGAAGAGA+TGG - chr7_4:27046411-27046430 Msa1147680:intron 40.0%
GAATTTCGGTTTCCCAACAT+AGG + chr7_4:27046462-27046481 None:intergenic 40.0%
TGAAAAGTCAAACTCGTTCG+TGG - chr7_4:27046541-27046560 Msa1147680:intron 40.0%
GAAAAGTCAAACTCGTTCGT+GGG - chr7_4:27046542-27046561 Msa1147680:intron 40.0%
GTGGCACCTGAAGTTATATT+AGG - chr7_4:27046578-27046597 Msa1147680:intron 40.0%
CGCCATTTAGTAGTCCAAAT+AGG - chr7_4:27046672-27046691 Msa1147680:intron 40.0%
TCAACTTCAATCCTACGATC+GGG + chr7_4:27046794-27046813 None:intergenic 40.0%
TCATTCTGTGGAATATACGG+TGG + chr7_4:27046881-27046900 None:intergenic 40.0%
TTGTCCTCAACTTCATTCTG+TGG + chr7_4:27046893-27046912 None:intergenic 40.0%
AATGAAGTTGAGGACAAAGC+TGG - chr7_4:27046896-27046915 Msa1147680:CDS 40.0%
ATGAAGTTGAGGACAAAGCT+GGG - chr7_4:27046897-27046916 Msa1147680:CDS 40.0%
GATGTTGAGTCCTTTGTACA+TGG - chr7_4:27046932-27046951 Msa1147680:CDS 40.0%
AAAAGAAGAGGGGAATGAGA+AGG - chr7_4:27047012-27047031 Msa1147680:CDS 40.0%
GTTGAGTCAGACTCAAACTA+AGG - chr7_4:27047075-27047094 Msa1147680:five_prime_UTR 40.0%
CTTACCTCTGCCATGAATCA+CGG - chr7_4:27045185-27045204 Msa1147680:CDS 45.0%
TTGATCATCCTCTCTTGCCT+AGG - chr7_4:27045420-27045439 Msa1147680:CDS 45.0%
CCTTTAAACCTAGGCAAGAG+AGG + chr7_4:27045431-27045450 None:intergenic 45.0%
CCTCTCTTGCCTAGGTTTAA+AGG - chr7_4:27045428-27045447 Msa1147680:CDS 45.0%
TTGTGTGGATCAACCTTGCA+CGG - chr7_4:27045885-27045904 Msa1147680:CDS 45.0%
!! CGTGGAATTGGTGTTAGCAT+TGG - chr7_4:27046214-27046233 Msa1147680:intron 45.0%
GAGTTGGAACTCAACGAGTT+TGG + chr7_4:27046362-27046381 None:intergenic 45.0%
!! GGTGTTGATTGGTGGTCATT+TGG - chr7_4:27046617-27046636 Msa1147680:intron 45.0%
GGGTGAATCAACACCATTGA+AGG - chr7_4:27046739-27046758 Msa1147680:CDS 45.0%
TTGAGAAAGATCCCGATCGT+AGG - chr7_4:27046780-27046799 Msa1147680:CDS 45.0%
CTTACCTCTGCCATGAATCA+CGG - chr7_4:27045185-27045204 Msa1147680:CDS 45.0%
TTGATCATCCTCTCTTGCCT+AGG - chr7_4:27045420-27045439 Msa1147680:CDS 45.0%
CCTTTAAACCTAGGCAAGAG+AGG + chr7_4:27045431-27045450 None:intergenic 45.0%
CCTCTCTTGCCTAGGTTTAA+AGG - chr7_4:27045428-27045447 Msa1147680:CDS 45.0%
TTGTGTGGATCAACCTTGCA+CGG - chr7_4:27045885-27045904 Msa1147680:CDS 45.0%
!! CGTGGAATTGGTGTTAGCAT+TGG - chr7_4:27046214-27046233 Msa1147680:intron 45.0%
GAGTTGGAACTCAACGAGTT+TGG + chr7_4:27046362-27046381 None:intergenic 45.0%
!! GGTGTTGATTGGTGGTCATT+TGG - chr7_4:27046617-27046636 Msa1147680:intron 45.0%
GGGTGAATCAACACCATTGA+AGG - chr7_4:27046739-27046758 Msa1147680:CDS 45.0%
TTGAGAAAGATCCCGATCGT+AGG - chr7_4:27046780-27046799 Msa1147680:CDS 45.0%
! AATACGGTTTCGGAGGTACG+AGG - chr7_4:27045158-27045177 Msa1147680:CDS 50.0%
CGTGATTCATGGCAGAGGTA+AGG + chr7_4:27045187-27045206 None:intergenic 50.0%
TTGAGTTCCAACTCGTCACC+AGG - chr7_4:27046368-27046387 Msa1147680:intron 50.0%
!! TTTGGTGGTGAGTTGGAACC+TGG + chr7_4:27046389-27046408 None:intergenic 50.0%
AAACTCGTTCGTGGGAACTG+AGG - chr7_4:27046550-27046569 Msa1147680:intron 50.0%
AGAGGGGAATGAGAAGGAGA+AGG - chr7_4:27047018-27047037 Msa1147680:CDS 50.0%
! AATACGGTTTCGGAGGTACG+AGG - chr7_4:27045158-27045177 Msa1147680:CDS 50.0%
CGTGATTCATGGCAGAGGTA+AGG + chr7_4:27045187-27045206 None:intergenic 50.0%
TTGAGTTCCAACTCGTCACC+AGG - chr7_4:27046368-27046387 Msa1147680:intron 50.0%
!! TTTGGTGGTGAGTTGGAACC+TGG + chr7_4:27046389-27046408 None:intergenic 50.0%
AAACTCGTTCGTGGGAACTG+AGG - chr7_4:27046550-27046569 Msa1147680:intron 50.0%
AGAGGGGAATGAGAAGGAGA+AGG - chr7_4:27047018-27047037 Msa1147680:CDS 50.0%
ACCTCTGCCATGAATCACGG+CGG - chr7_4:27045188-27045207 Msa1147680:CDS 55.0%
TGTTTCGCCGCCGTGATTCA+TGG + chr7_4:27045198-27045217 None:intergenic 55.0%
GAATCACGGCGGCGAAACAT+TGG - chr7_4:27045199-27045218 Msa1147680:CDS 55.0%
! ATTTTATCCGCCGTCGGTCG+TGG - chr7_4:27045239-27045258 Msa1147680:CDS 55.0%
TGTGGATCAACCTTGCACGG+TGG - chr7_4:27045888-27045907 Msa1147680:CDS 55.0%
GAGTCTAATGCCACCGTGCA+AGG + chr7_4:27045901-27045920 None:intergenic 55.0%
! GTTGGAACCTGGTGACGAGT+TGG + chr7_4:27046378-27046397 None:intergenic 55.0%
CGTGGGAACTGAGGATTACG+TGG - chr7_4:27046559-27046578 Msa1147680:intron 55.0%
ACCTCTGCCATGAATCACGG+CGG - chr7_4:27045188-27045207 Msa1147680:CDS 55.0%
TGTTTCGCCGCCGTGATTCA+TGG + chr7_4:27045198-27045217 None:intergenic 55.0%
GAATCACGGCGGCGAAACAT+TGG - chr7_4:27045199-27045218 Msa1147680:CDS 55.0%
! ATTTTATCCGCCGTCGGTCG+TGG - chr7_4:27045239-27045258 Msa1147680:CDS 55.0%
TGTGGATCAACCTTGCACGG+TGG - chr7_4:27045888-27045907 Msa1147680:CDS 55.0%
GAGTCTAATGCCACCGTGCA+AGG + chr7_4:27045901-27045920 None:intergenic 55.0%
! GTTGGAACCTGGTGACGAGT+TGG + chr7_4:27046378-27046397 None:intergenic 55.0%
CGTGGGAACTGAGGATTACG+TGG - chr7_4:27046559-27046578 Msa1147680:intron 55.0%
GCCGCCGTGATTCATGGCAG+AGG + chr7_4:27045192-27045211 None:intergenic 65.0%
ACCCTTTGCGCCACGACCGA+CGG + chr7_4:27045252-27045271 None:intergenic 65.0%
GCCGCCGTGATTCATGGCAG+AGG + chr7_4:27045192-27045211 None:intergenic 65.0%
ACCCTTTGCGCCACGACCGA+CGG + chr7_4:27045252-27045271 None:intergenic 65.0%
CTTTGCGCCACGACCGACGG+CGG + chr7_4:27045249-27045268 None:intergenic 70.0%
GCCGTCGGTCGTGGCGCAAA+GGG - chr7_4:27045248-27045267 Msa1147680:CDS 70.0%
CTTTGCGCCACGACCGACGG+CGG + chr7_4:27045249-27045268 None:intergenic 70.0%
GCCGTCGGTCGTGGCGCAAA+GGG - chr7_4:27045248-27045267 Msa1147680:CDS 70.0%
CGCCGTCGGTCGTGGCGCAA+AGG - chr7_4:27045247-27045266 Msa1147680:CDS 75.0%
CGCCGTCGGTCGTGGCGCAA+AGG - chr7_4:27045247-27045266 Msa1147680:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 27045155 27047111 27045155 ID=Msa1147680;Name=Msa1147680
chr7_4 mRNA 27045155 27047111 27045155 ID=Msa1147680-mRNA-1;Parent=Msa1147680;Name=Msa1147680-mRNA-1;_AED=0.02;_eAED=0.02;_QI=42|1|0.5|1|1|1|2|0|424
chr7_4 exon 27045155 27046061 27045155 ID=Msa1147680-mRNA-1:exon:6639;Parent=Msa1147680-mRNA-1
chr7_4 exon 27046702 27047111 27046702 ID=Msa1147680-mRNA-1:exon:6638;Parent=Msa1147680-mRNA-1
chr7_4 five_prime_UTR 27047070 27047111 27047070 ID=Msa1147680-mRNA-1:five_prime_utr;Parent=Msa1147680-mRNA-1
chr7_4 CDS 27046702 27047069 27046702 ID=Msa1147680-mRNA-1:cds;Parent=Msa1147680-mRNA-1
chr7_4 CDS 27045155 27046061 27045155 ID=Msa1147680-mRNA-1:cds;Parent=Msa1147680-mRNA-1
Gene Sequence

>Msa1147680

ATGAATCACGGCGGCGAAACATTGGACTTCCGAAACCTTAAAATTTTATCCGCCGTCGGTCGTGGCGCAAAGGGTGTCGTGTTTCTTTCAAGAACCTACGGATCATCGAAAGAAGAATGGTTGGCATTGAAAGTGATATCTAAAGAGCTTCTTTTGAGGAAAAATAATGGAAAGAATGGTGAATGCAAAAGGGTGAAATTTGAACAACAAATACTACGTCGTTTTGATCATCCTCTCTTGCCTAGGTTTAAAGGAGCTTTTCAAACTGAAAAGCTTATTGGATTTGCTATTGATTATTGTCATGGTGGGAATTTGCATTCTCTTAGAAAGAAACAACCTGAGAAAAAATTCTCTGAAGAAACAATCAGGTTTTATGCCGTGGAATTGGTGTTAGCATTGGAGTATCTACACAATTTAGGAGTAGTTTATAGAGATTTGAAGCCGGAGAATATCATGATTCAACAAACGGGTCACATAATGATCGTAGATTTCGACCTGTCAAAGAAATTAAATCCAAAATCACCAAACTCGTTGAGTTCCAACTCGTCACCAGGTTCCAACTCACCACCAAATACGAAAAACAGAAGGAAGAGATGGTTATCAAAGTTCTACTCTTGTAATTCCTATGTTGGGAAACCGAAATTCGAATCATTGAGTCAAATCGATATCAACTCGGTTTGTAAAAGGAGTGAGTCAGACTCAGTTGAAAAGTCAAACTCGTTCGTGGGAACTGAGGATTACGTGGCACCTGAAGTTATATTAGGGAATGGACATAATTTTGGTGTTGATTGGTGGTCATTTGGCGTTGTTTTGTATGAGTTGTTTTATGGAACGACGCCATTTAGTAGTCCAAATAGGAAAGAAACGTTTCACAAGATTTTAACAATGGAGGTTGAACAAAAGGGTGAATCAACACCATTGAAGGATTTGATTGCAAAGTTGCTTGAGAAAGATCCCGATCGTAGGATTGAAGTTGATGAAATAAAAGGTCATGATTTCTTTAAAGGTGTGAAGTGGAATACGGTGTTGCATATTGTGCGTCCACCGTATATTCCACAGAATGAAGTTGAGGACAAAGCTGGGTTTTCGAGAAAAGATGTTGAGTCCTTTGTACATGGAATATTTTTTCCAAAGAATAAAAATAAGAGTGAGAAAGAGAAAAATAATGAGGTAAAAAAAGAAGAGGGGAATGAGAAGGAGAAGGAGAATGATAATAATAAGAATGTGTGGGTTGAGAAGTTGAGTCAGACTCAAACTAAGGATGAAATTTTTTGA

Protein sequence

>Msa1147680

MNHGGETLDFRNLKILSAVGRGAKGVVFLSRTYGSSKEEWLALKVISKELLLRKNNGKNGECKRVKFEQQILRRFDHPLLPRFKGAFQTEKLIGFAIDYCHGGNLHSLRKKQPEKKFSEETIRFYAVELVLALEYLHNLGVVYRDLKPENIMIQQTGHIMIVDFDLSKKLNPKSPNSLSSNSSPGSNSPPNTKNRRKRWLSKFYSCNSYVGKPKFESLSQIDINSVCKRSESDSVEKSNSFVGTEDYVAPEVILGNGHNFGVDWWSFGVVLYELFYGTTPFSSPNRKETFHKILTMEVEQKGESTPLKDLIAKLLEKDPDRRIEVDEIKGHDFFKGVKWNTVLHIVRPPYIPQNEVEDKAGFSRKDVESFVHGIFFPKNKNKSEKEKNNEVKKEEGNEKEKENDNNKNVWVEKLSQTQTKDEIF*