Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149980 | XP_039684246.1 | 91.632 | 239 | 12 | 1 | 1 | 239 | 1 | 231 | 8.93e-134 | 386 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149980 | sp|Q56XP9|ERFL1_ARATH | 67.708 | 96 | 30 | 1 | 108 | 202 | 109 | 204 | 2.68e-37 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149980 | A0A072U9S6 | 89.121 | 239 | 11 | 2 | 1 | 239 | 1 | 224 | 9.26e-127 | 367 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1149980 | TF | AP2/ERF-ERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1059290 | Msa1149980 | 0.848155 | 7.337455e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149980 | MtrunA17_Chr7g0235291 | 89.121 | 239 | 11 | 2 | 1 | 239 | 1 | 224 | 1.78e-130 | 367 |
| Msa1149980 | MtrunA17_Chr8g0339471 | 62.917 | 240 | 88 | 1 | 1 | 239 | 1 | 240 | 1.63e-86 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149980 | AT4G13040.8 | 67.708 | 96 | 30 | 1 | 108 | 202 | 79 | 174 | 1.26e-38 | 133 |
| Msa1149980 | AT4G13040.4 | 67.708 | 96 | 30 | 1 | 108 | 202 | 79 | 174 | 1.26e-38 | 133 |
| Msa1149980 | AT4G13040.6 | 67.708 | 96 | 30 | 1 | 108 | 202 | 53 | 148 | 2.34e-38 | 132 |
| Msa1149980 | AT4G13040.2 | 67.708 | 96 | 30 | 1 | 108 | 202 | 53 | 148 | 2.34e-38 | 132 |
| Msa1149980 | AT4G13040.1 | 67.708 | 96 | 30 | 1 | 108 | 202 | 109 | 204 | 2.72e-38 | 133 |
| Msa1149980 | AT4G13040.3 | 67.708 | 96 | 30 | 1 | 108 | 202 | 129 | 224 | 6.83e-38 | 133 |
| Msa1149980 | AT4G13040.5 | 70.115 | 87 | 25 | 1 | 108 | 193 | 53 | 139 | 1.51e-37 | 129 |
| Msa1149980 | AT4G13040.7 | 70.115 | 87 | 25 | 1 | 108 | 193 | 109 | 195 | 3.83e-37 | 130 |
Find 77 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTGGAAGATCGAAAT+TGG | 0.170910 | 7_4:+32720470 | None:intergenic |
| AAGCCATTGTTGTTGGTAAA+AGG | 0.176354 | 7_4:+32724574 | None:intergenic |
| GTACTCGTTCACTGCTTTAA+AGG | 0.199836 | 7_4:-32723255 | Msa1149980:five_prime_UTR |
| CCAGGTTCATCAAATATTTC+TGG | 0.203815 | 7_4:-32721537 | Msa1149980:CDS |
| GTTGGACATTGTCAACTTTC+AGG | 0.212580 | 7_4:-32719908 | Msa1149980:three_prime_UTR |
| AAAAGAAAGAAGGGGTTTAT+AGG | 0.268622 | 7_4:+32724663 | None:intergenic |
| ATTCAAATGGGATGATTTCT+TGG | 0.268781 | 7_4:-32720427 | Msa1149980:CDS |
| AAATAAATGTTGCATTAGTT+TGG | 0.302451 | 7_4:+32719862 | None:intergenic |
| TTGTAGAAAATTCAGCATTA+TGG | 0.312711 | 7_4:-32720012 | Msa1149980:three_prime_UTR |
| ATCATCATGCTTTGGTGATT+CGG | 0.340271 | 7_4:-32723208 | Msa1149980:five_prime_UTR |
| TACTCGTTCACTGCTTTAAA+GGG | 0.347019 | 7_4:-32723254 | Msa1149980:five_prime_UTR |
| GGTAAAAGGGTACCTGAAAA+AGG | 0.350898 | 7_4:+32724588 | None:intergenic |
| TTAGTTTGGTGAATTTATTA+AGG | 0.353329 | 7_4:+32719876 | None:intergenic |
| AGTTCTTGCTTCTCTTCTTC+TGG | 0.355294 | 7_4:+32720456 | None:intergenic |
| CTTAAGAAGGCGCAGGCTCT+TGG | 0.364636 | 7_4:-32723157 | Msa1149980:CDS |
| GATCTTATTCCTACACTGTC+TGG | 0.388027 | 7_4:+32722915 | None:intergenic |
| GAAAATTAATCATCATGCTT+TGG | 0.388375 | 7_4:-32723216 | Msa1149980:five_prime_UTR |
| TGGTTGAATAAGCAGCTCTT+TGG | 0.393760 | 7_4:+32721503 | None:intergenic |
| AAGCATAGGCCGTTCACTCT+TGG | 0.399260 | 7_4:+32722956 | None:intergenic |
| AGCATAGGCCGTTCACTCTT+GGG | 0.403215 | 7_4:+32722957 | None:intergenic |
| CTATACTGTGAGAATCTAAC+TGG | 0.406180 | 7_4:-32723008 | Msa1149980:CDS |
| ATCCCTTGCACAAAGATGAT+TGG | 0.416704 | 7_4:-32720149 | Msa1149980:CDS |
| TTAAGAAGGCGCAGGCTCTT+GGG | 0.424765 | 7_4:-32723156 | Msa1149980:CDS |
| AAAGATTATTAATGCTATCA+AGG | 0.426305 | 7_4:+32719985 | None:intergenic |
| AAGAACTGCGCAAATTCAAA+TGG | 0.429554 | 7_4:-32720440 | Msa1149980:CDS |
| AGCCATTGTTGTTGGTAAAA+GGG | 0.433119 | 7_4:+32724575 | None:intergenic |
| AAGAAGGGTGGTGGAATGGA+AGG | 0.433672 | 7_4:+32724882 | None:intergenic |
| GTGGTATAATTGAATATTGA+TGG | 0.434040 | 7_4:+32724905 | None:intergenic |
| TCCCTTGCACAAAGATGATT+GGG | 0.444367 | 7_4:-32720148 | Msa1149980:CDS |
| AGTCAACAAGCCATTGTTGT+TGG | 0.447476 | 7_4:+32724567 | None:intergenic |
| AATCTTAAGGAAAAGAAAGA+AGG | 0.449854 | 7_4:+32724653 | None:intergenic |
| CTGGTTCTGAAAATTTGTCT+TGG | 0.459968 | 7_4:-32722989 | Msa1149980:CDS |
| TTAGGGCTGCTTTCATGTGT+GGG | 0.461726 | 7_4:-32720500 | Msa1149980:intron |
| TCTTCTGGAAGATCGAAATT+GGG | 0.470661 | 7_4:+32720471 | None:intergenic |
| GGGGTTTATAGGAATATTGA+AGG | 0.470955 | 7_4:+32724674 | None:intergenic |
| TTTAGGGCTGCTTTCATGTG+TGG | 0.477150 | 7_4:-32720501 | Msa1149980:intron |
| TTCTCACAGTATAGAGGAAG+AGG | 0.479128 | 7_4:+32723017 | None:intergenic |
| GTTAGATTCTCACAGTATAG+AGG | 0.486663 | 7_4:+32723011 | None:intergenic |
| CTGCTTATTCAACCAACCCT+TGG | 0.488352 | 7_4:-32721495 | Msa1149980:intron |
| ATCTAAGTGAGAAAATCTTA+AGG | 0.492378 | 7_4:+32724640 | None:intergenic |
| ATCTTAAGGAAAAGAAAGAA+GGG | 0.506714 | 7_4:+32724654 | None:intergenic |
| CCAGAAATATTTGATGAACC+TGG | 0.508695 | 7_4:+32721537 | None:intergenic |
| TTCCCAATCATCTTTGTGCA+AGG | 0.511091 | 7_4:+32720146 | None:intergenic |
| AGGCTCTTGGGACTATGCTC+AGG | 0.512795 | 7_4:-32723144 | Msa1149980:intron |
| TCCCAATCATCTTTGTGCAA+GGG | 0.517342 | 7_4:+32720147 | None:intergenic |
| ATCTTATTCCTACACTGTCT+GGG | 0.537378 | 7_4:+32722916 | None:intergenic |
| AGAACTGCGCAAATTCAAAT+GGG | 0.547529 | 7_4:-32720439 | Msa1149980:CDS |
| AATAACACACAATACAAAAG+AGG | 0.549296 | 7_4:-32724823 | Msa1149980:five_prime_UTR |
| CTTTAAAGGGAAAGACGGTA+TGG | 0.554839 | 7_4:-32723241 | Msa1149980:five_prime_UTR |
| AGTCAAGAAGTCAGCATGAG+AGG | 0.556795 | 7_4:-32720930 | Msa1149980:CDS |
| AAGCTGCTCACTTATATGAC+AGG | 0.561672 | 7_4:-32720821 | Msa1149980:intron |
| TAACAATGGTAAGCTTAAGA+AGG | 0.566278 | 7_4:-32723170 | Msa1149980:exon |
| CACTGCTTTAAAGGGAAAGA+CGG | 0.566321 | 7_4:-32723246 | Msa1149980:five_prime_UTR |
| AGGGTGGTGGAATGGAAGGG+TGG | 0.566580 | 7_4:+32724886 | None:intergenic |
| AGAAGGGTGGTGGAATGGAA+GGG | 0.567468 | 7_4:+32724883 | None:intergenic |
| TCAAACGTAGGAAGCGACAT+AGG | 0.588875 | 7_4:-32720968 | Msa1149980:CDS |
| GATGATTGGGAAAGTATGCA+AGG | 0.596433 | 7_4:-32720135 | Msa1149980:CDS |
| TGGTAAGCTTAAGAAGGCGC+AGG | 0.598870 | 7_4:-32723164 | Msa1149980:CDS |
| AACACACAATACAAAAGAGG+AGG | 0.600645 | 7_4:-32724820 | Msa1149980:five_prime_UTR |
| ATGCTAAACCCAAGAGTGAA+CGG | 0.601380 | 7_4:-32722965 | Msa1149980:CDS |
| ACTGTTGTGCAAGAAGAACC+AGG | 0.605854 | 7_4:-32721555 | Msa1149980:CDS |
| AGGAATATTGAAGGAAGACA+AGG | 0.607502 | 7_4:+32724683 | None:intergenic |
| ATGAGATAATGTGTGTGTTG+TGG | 0.607518 | 7_4:+32724722 | None:intergenic |
| CTTGCGATCCAACAGTACCT+AGG | 0.608114 | 7_4:+32720847 | None:intergenic |
| AAAGAGTGTACATCTCAAGT+TGG | 0.610547 | 7_4:-32719926 | Msa1149980:three_prime_UTR |
| CTTGCATCATCTGAAAGCAT+AGG | 0.615914 | 7_4:+32722942 | None:intergenic |
| TAGAGGAAGAGGATTGACAA+AGG | 0.618981 | 7_4:+32723028 | None:intergenic |
| TCTTAAGGAAAAGAAAGAAG+GGG | 0.619203 | 7_4:+32724655 | None:intergenic |
| GAAAGTATGCAAGGAGTGAG+TGG | 0.620825 | 7_4:-32720126 | Msa1149980:CDS |
| AATATTGAAGGAAGACAAGG+TGG | 0.633313 | 7_4:+32724686 | None:intergenic |
| GTAAACAACTAACCAAGGGT+TGG | 0.634157 | 7_4:+32721483 | None:intergenic |
| GCAAGCATCCCAGACAGTGT+AGG | 0.639402 | 7_4:-32722924 | Msa1149980:CDS |
| ACACACAATACAAAAGAGGA+GGG | 0.642777 | 7_4:-32724819 | Msa1149980:five_prime_UTR |
| TAATTAATGGATCTAGCATG+AGG | 0.667121 | 7_4:+32720037 | None:intergenic |
| TTAATGGATCTAGCATGAGG+TGG | 0.688743 | 7_4:+32720040 | None:intergenic |
| CAGGACCTGCTGTCAAACGT+AGG | 0.692659 | 7_4:-32720980 | Msa1149980:CDS |
| GACAAGAAACAGATTCACCT+AGG | 0.711667 | 7_4:-32720864 | Msa1149980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAACCATTAA+AGG | + | chr7_4:32720440-32720459 | None:intergenic | 10.0% |
| !!! | AAATTAGTTTTAGTTTTAAA+AGG | - | chr7_4:32720730-32720749 | Msa1149980:intron | 10.0% |
| !!! | AATTAGTTTTAGTTTTAAAA+GGG | - | chr7_4:32720731-32720750 | Msa1149980:intron | 10.0% |
| !!! | TTATTTTATCTTTTTTTCAT+TGG | - | chr7_4:32722003-32722022 | Msa1149980:intron | 10.0% |
| !!! | ATTTTCTACAATATAATTAA+TGG | + | chr7_4:32724755-32724774 | None:intergenic | 10.0% |
| !!! | TATTTTCATAAGTTATCTTT+GGG | - | chr7_4:32721257-32721276 | Msa1149980:intron | 15.0% |
| !!! | AGCATATTTAAAACTTATTT+GGG | + | chr7_4:32721391-32721410 | None:intergenic | 15.0% |
| !!! | TGATAAAATATAGCTTTTTT+TGG | + | chr7_4:32722912-32722931 | None:intergenic | 15.0% |
| !! | TAAATCAAAAACGATTTATT+TGG | + | chr7_4:32723377-32723396 | None:intergenic | 15.0% |
| !!! | AAATAAATCGTTTTTGATTT+AGG | - | chr7_4:32723376-32723395 | Msa1149980:intron | 15.0% |
| !!! | TTAAACTTTTCATATTTCAT+AGG | - | chr7_4:32723631-32723650 | Msa1149980:intron | 15.0% |
| !!! | AAAAACATCTCTTTTTTTTT+AGG | - | chr7_4:32724258-32724277 | Msa1149980:intron | 15.0% |
| !!! | AAAACATCTCTTTTTTTTTA+GGG | - | chr7_4:32724259-32724278 | Msa1149980:intron | 15.0% |
| !! | GAAGAAAATAAGAAAAAGAA+GGG | + | chr7_4:32719912-32719931 | None:intergenic | 20.0% |
| !! | AGAAGAAAATAAGAAAAAGA+AGG | + | chr7_4:32719913-32719932 | None:intergenic | 20.0% |
| !! | AAAACAAAAACAGAAACAAA+AGG | - | chr7_4:32720016-32720035 | Msa1149980:three_prime_UTR | 20.0% |
| !! | TAAATACTCAAAACATTGAA+TGG | + | chr7_4:32720640-32720659 | None:intergenic | 20.0% |
| !!! | ATTCAATGTTTTGAGTATTT+AGG | - | chr7_4:32720639-32720658 | Msa1149980:intron | 20.0% |
| !! | GATTTGAATTATGTTTACAA+AGG | - | chr7_4:32720796-32720815 | Msa1149980:intron | 20.0% |
| !! | AGTTATACTACAAAAAACAA+TGG | + | chr7_4:32721071-32721090 | None:intergenic | 20.0% |
| !!! | CTATTTTCATAAGTTATCTT+TGG | - | chr7_4:32721256-32721275 | Msa1149980:intron | 20.0% |
| !! | AATAAGTCAAAAACAGTTTA+TGG | - | chr7_4:32721290-32721309 | Msa1149980:intron | 20.0% |
| !!! | GAGCATATTTAAAACTTATT+TGG | + | chr7_4:32721392-32721411 | None:intergenic | 20.0% |
| !! | CTTTAAACAGATTTATCAAT+AGG | + | chr7_4:32721947-32721966 | None:intergenic | 20.0% |
| !!! | ATTGAACATTTTGAAATGAA+TGG | + | chr7_4:32722387-32722406 | None:intergenic | 20.0% |
| !!! | AGATGAAAAATATTTTGAAG+AGG | - | chr7_4:32722678-32722697 | Msa1149980:intron | 20.0% |
| !!! | AAAAAGCTATATTTTATCAG+CGG | - | chr7_4:32722913-32722932 | Msa1149980:CDS | 20.0% |
| !! | AATCAGAATAAATGTTTACA+AGG | - | chr7_4:32723100-32723119 | Msa1149980:intron | 20.0% |
| !! | CTTATTTAAGTATATTTCAC+TGG | - | chr7_4:32723669-32723688 | Msa1149980:intron | 20.0% |
| !! | TATACTTCAAAAATATGAAG+TGG | - | chr7_4:32723871-32723890 | Msa1149980:intron | 20.0% |
| !! | AAAGATTATTAATGCTATCA+AGG | + | chr7_4:32724794-32724813 | None:intergenic | 20.0% |
| !!! | TTAGTTTGGTGAATTTATTA+AGG | + | chr7_4:32724903-32724922 | None:intergenic | 20.0% |
| !! | AAATAAATGTTGCATTAGTT+TGG | + | chr7_4:32724917-32724936 | None:intergenic | 20.0% |
| ! | GTGGTATAATTGAATATTGA+TGG | + | chr7_4:32719874-32719893 | None:intergenic | 25.0% |
| ! | AATAACACACAATACAAAAG+AGG | - | chr7_4:32719953-32719972 | Msa1149980:three_prime_UTR | 25.0% |
| ! | ATCTTAAGGAAAAGAAAGAA+GGG | + | chr7_4:32720125-32720144 | None:intergenic | 25.0% |
| ! | AATCTTAAGGAAAAGAAAGA+AGG | + | chr7_4:32720126-32720145 | None:intergenic | 25.0% |
| ! | ATCTAAGTGAGAAAATCTTA+AGG | + | chr7_4:32720139-32720158 | None:intergenic | 25.0% |
| ! | AAAAGACACAAAAAAACGTA+CGG | + | chr7_4:32720249-32720268 | None:intergenic | 25.0% |
| ! | AAGGAAACTAAATGAAAGAA+AGG | + | chr7_4:32720281-32720300 | None:intergenic | 25.0% |
| ! | GACATGACAACATATAAAAA+AGG | + | chr7_4:32720300-32720319 | None:intergenic | 25.0% |
| !! | TTTTTATATGTTGTCATGTC+CGG | - | chr7_4:32720300-32720319 | Msa1149980:intron | 25.0% |
| ! | CTTTCTATAGTTTCCTTTAA+TGG | - | chr7_4:32720424-32720443 | Msa1149980:CDS | 25.0% |
| ! | TTGTTTCATTAAGCAAAACT+AGG | - | chr7_4:32720662-32720681 | Msa1149980:intron | 25.0% |
| ! | TCTTATGAGAAAAACAAAGT+TGG | + | chr7_4:32720691-32720710 | None:intergenic | 25.0% |
| !!! | AAGATTTGTTTTGTCTTCTT+TGG | - | chr7_4:32720707-32720726 | Msa1149980:intron | 25.0% |
| !!! | GCTTTTTGCTATGATAAAAT+TGG | - | chr7_4:32720767-32720786 | Msa1149980:intron | 25.0% |
| !! | GTTTACAAAGGTTTATTTCT+AGG | - | chr7_4:32720808-32720827 | Msa1149980:intron | 25.0% |
| ! | TTTGTATCTGTACTTGTTTA+TGG | - | chr7_4:32720873-32720892 | Msa1149980:CDS | 25.0% |
| ! | AAAGGCAAAATGCATATTTA+GGG | + | chr7_4:32721112-32721131 | None:intergenic | 25.0% |
| ! | TAAAGGCAAAATGCATATTT+AGG | + | chr7_4:32721113-32721132 | None:intergenic | 25.0% |
| !! | TTCATAAGTTTTCATGAACA+CGG | - | chr7_4:32721338-32721357 | Msa1149980:intron | 25.0% |
| !!! | ACTTATTTGGGCTTATTTTA+TGG | + | chr7_4:32721379-32721398 | None:intergenic | 25.0% |
| ! | TTGAAATTTACAGCATTCTT+TGG | - | chr7_4:32721447-32721466 | Msa1149980:intron | 25.0% |
| ! | GAAAATTAATCATCATGCTT+TGG | - | chr7_4:32721560-32721579 | Msa1149980:CDS | 25.0% |
| ! | AATAAAAGTCCTCATTGAAA+TGG | + | chr7_4:32721988-32722007 | None:intergenic | 25.0% |
| !! | AATGTCTTAGAATTTAGGTT+AGG | + | chr7_4:32722312-32722331 | None:intergenic | 25.0% |
| !!! | TCTTCTTTTCTCTAAGATTT+TGG | - | chr7_4:32722561-32722580 | Msa1149980:intron | 25.0% |
| !!! | TAAGATTTTGGCTAGTTATT+TGG | - | chr7_4:32722573-32722592 | Msa1149980:intron | 25.0% |
| !! | TTGAAGAGGAAGTTTAAAAT+TGG | - | chr7_4:32722692-32722711 | Msa1149980:intron | 25.0% |
| !! | GTTGATAAATGTATGAAGTT+AGG | - | chr7_4:32723122-32723141 | Msa1149980:intron | 25.0% |
| ! | AAATAATAGATCTACACCAA+GGG | + | chr7_4:32723148-32723167 | None:intergenic | 25.0% |
| ! | TAAATAATAGATCTACACCA+AGG | + | chr7_4:32723149-32723168 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTAGGATCTGTT+TGG | - | chr7_4:32723386-32723405 | Msa1149980:intron | 25.0% |
| !! | TGTTTGGAACTATTAGTAAT+TGG | - | chr7_4:32723402-32723421 | Msa1149980:intron | 25.0% |
| ! | TAATTAACATACACACGTTA+GGG | + | chr7_4:32723556-32723575 | None:intergenic | 25.0% |
| ! | TAACAACATTATAGAACTCA+AGG | + | chr7_4:32723986-32724005 | None:intergenic | 25.0% |
| ! | ACGCTAACAATAAAATATCT+TGG | - | chr7_4:32724190-32724209 | Msa1149980:intron | 25.0% |
| !! | TTTTCAAACTAAGTAGATCA+TGG | + | chr7_4:32724242-32724261 | None:intergenic | 25.0% |
| ! | TATAACTGAATACATGTGTA+TGG | - | chr7_4:32724489-32724508 | Msa1149980:intron | 25.0% |
| ! | TTGTAGAAAATTCAGCATTA+TGG | - | chr7_4:32724764-32724783 | Msa1149980:five_prime_UTR | 25.0% |
| !!! | ATTTATTTTCTTCTGTGCAA+TGG | - | chr7_4:32724929-32724948 | Msa1149980:five_prime_UTR | 25.0% |
| GAAAATAAGAAAAAGAAGGG+TGG | + | chr7_4:32719909-32719928 | None:intergenic | 30.0% | |
| ACAAAAACAGAAACAAAAGG+TGG | - | chr7_4:32720019-32720038 | Msa1149980:three_prime_UTR | 30.0% | |
| AAAAGAAAGAAGGGGTTTAT+AGG | + | chr7_4:32720116-32720135 | None:intergenic | 30.0% | |
| TCTTAAGGAAAAGAAAGAAG+GGG | + | chr7_4:32720124-32720143 | None:intergenic | 30.0% | |
| ACAAAAAAACGTACGGAAAT+GGG | + | chr7_4:32720242-32720261 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTTGTGATTTGTG+TGG | - | chr7_4:32720488-32720507 | Msa1149980:CDS | 30.0% |
| ! | TTATTACCCTTTTCCAAGAA+AGG | - | chr7_4:32720534-32720553 | Msa1149980:intron | 30.0% |
| !! | TATGGATGATTTTGACCATA+TGG | - | chr7_4:32720891-32720910 | Msa1149980:CDS | 30.0% |
| ! | CATTGTTTAGTGTCAACTTT+TGG | - | chr7_4:32721005-32721024 | Msa1149980:intron | 30.0% |
| ! | GGTGATTTTCTACCTATTTT+TGG | - | chr7_4:32721026-32721045 | Msa1149980:intron | 30.0% |
| CTAGTTATAGGACCAAAAAT+AGG | + | chr7_4:32721041-32721060 | None:intergenic | 30.0% | |
| !!! | CTATTTTTGGTCCTATAACT+AGG | - | chr7_4:32721039-32721058 | Msa1149980:intron | 30.0% |
| ! | AATGGTCTTTTCCTAGTTAT+AGG | + | chr7_4:32721053-32721072 | None:intergenic | 30.0% |
| ! | CATTTTGCCTTTACTAATTG+TGG | - | chr7_4:32721120-32721139 | Msa1149980:intron | 30.0% |
| AAACACACCACAATTAGTAA+AGG | + | chr7_4:32721130-32721149 | None:intergenic | 30.0% | |
| TTTACTAATTGTGGTGTGTT+TGG | - | chr7_4:32721129-32721148 | Msa1149980:intron | 30.0% | |
| AAAAAGACTGGAACTAACAA+TGG | - | chr7_4:32721592-32721611 | Msa1149980:intron | 30.0% | |
| TAACAATGGTAAGCTTAAGA+AGG | - | chr7_4:32721606-32721625 | Msa1149980:intron | 30.0% | |
| ! | GATTCAAAAGCATGATGAAT+AGG | + | chr7_4:32721672-32721691 | None:intergenic | 30.0% |
| ! | TTTGACTTTCCATTTCAATG+AGG | - | chr7_4:32721976-32721995 | Msa1149980:intron | 30.0% |
| ! | CTGAAAAATGAGTTTAGAAC+CGG | - | chr7_4:32722062-32722081 | Msa1149980:intron | 30.0% |
| ! | TGAAAAATGAGTTTAGAACC+GGG | - | chr7_4:32722063-32722082 | Msa1149980:intron | 30.0% |
| CTGAAAACGAATTTGTAAGT+TGG | - | chr7_4:32722241-32722260 | Msa1149980:intron | 30.0% | |
| GAAGCAATGTCTTAGAATTT+AGG | + | chr7_4:32722317-32722336 | None:intergenic | 30.0% | |
| TCTGATTCAATTGAAAGATC+AGG | - | chr7_4:32722335-32722354 | Msa1149980:intron | 30.0% | |
| AAAGAAGAATTATCCAACCA+TGG | + | chr7_4:32722549-32722568 | None:intergenic | 30.0% | |
| TGATACTCAGTAATCATCAT+TGG | - | chr7_4:32722606-32722625 | Msa1149980:intron | 30.0% | |
| TCAATGCATTATCTTTCATC+CGG | - | chr7_4:32722751-32722770 | Msa1149980:intron | 30.0% | |
| ! | CATGGTTCAATTGGTTTAAT+CGG | + | chr7_4:32722793-32722812 | None:intergenic | 30.0% |
| !!! | TTTTTTTGGTATTGCTTCGT+CGG | + | chr7_4:32722898-32722917 | None:intergenic | 30.0% |
| TGTTGTAAATCAAAGCAATG+AGG | + | chr7_4:32722964-32722983 | None:intergenic | 30.0% | |
| CATAGTAAACAACTAACCAA+GGG | + | chr7_4:32723300-32723319 | None:intergenic | 30.0% | |
| ACATAGTAAACAACTAACCA+AGG | + | chr7_4:32723301-32723320 | None:intergenic | 30.0% | |
| TAGCTTATTTCATACTAGAG+TGG | - | chr7_4:32723468-32723487 | Msa1149980:intron | 30.0% | |
| AGCTTATTTCATACTAGAGT+GGG | - | chr7_4:32723469-32723488 | Msa1149980:intron | 30.0% | |
| AATTAACATACACACGTTAG+GGG | + | chr7_4:32723555-32723574 | None:intergenic | 30.0% | |
| CTAATTAACATACACACGTT+AGG | + | chr7_4:32723557-32723576 | None:intergenic | 30.0% | |
| TAGATATCTTGAAACTGTTG+CGG | - | chr7_4:32723574-32723593 | Msa1149980:intron | 30.0% | |
| ! | TTCGATCAAATTCTCTGTTT+TGG | - | chr7_4:32723720-32723739 | Msa1149980:intron | 30.0% |
| TGCTAAATGCAATGTAAAGT+AGG | + | chr7_4:32723778-32723797 | None:intergenic | 30.0% | |
| TACTTTACATTGCATTTAGC+AGG | - | chr7_4:32723777-32723796 | Msa1149980:intron | 30.0% | |
| ATTCAAATGGGATGATTTCT+TGG | - | chr7_4:32724349-32724368 | Msa1149980:intron | 30.0% | |
| GAAAACAAGTAATATCTAGC+AGG | + | chr7_4:32724525-32724544 | None:intergenic | 30.0% | |
| !! | CAAGATTATTTTGCAGTTCT+GGG | + | chr7_4:32724601-32724620 | None:intergenic | 30.0% |
| !! | TCAAGATTATTTTGCAGTTC+TGG | + | chr7_4:32724602-32724621 | None:intergenic | 30.0% |
| ! | TAATTAATGGATCTAGCATG+AGG | + | chr7_4:32724742-32724761 | None:intergenic | 30.0% |
| AATAAGAAAAAGAAGGGTGG+TGG | + | chr7_4:32719906-32719925 | None:intergenic | 35.0% | |
| AACACACAATACAAAAGAGG+AGG | - | chr7_4:32719956-32719975 | Msa1149980:three_prime_UTR | 35.0% | |
| ACACACAATACAAAAGAGGA+GGG | - | chr7_4:32719957-32719976 | Msa1149980:three_prime_UTR | 35.0% | |
| ATGAGATAATGTGTGTGTTG+TGG | + | chr7_4:32720057-32720076 | None:intergenic | 35.0% | |
| AATATTGAAGGAAGACAAGG+TGG | + | chr7_4:32720093-32720112 | None:intergenic | 35.0% | |
| AGGAATATTGAAGGAAGACA+AGG | + | chr7_4:32720096-32720115 | None:intergenic | 35.0% | |
| GGGGTTTATAGGAATATTGA+AGG | + | chr7_4:32720105-32720124 | None:intergenic | 35.0% | |
| ! | TTGTCACCTTATCCTTTTTC+AGG | - | chr7_4:32720176-32720195 | Msa1149980:CDS | 35.0% |
| ! | TACCCTTTTACCAACAACAA+TGG | - | chr7_4:32720199-32720218 | Msa1149980:CDS | 35.0% |
| ! | AGCCATTGTTGTTGGTAAAA+GGG | + | chr7_4:32720204-32720223 | None:intergenic | 35.0% |
| ! | AAGCCATTGTTGTTGGTAAA+AGG | + | chr7_4:32720205-32720224 | None:intergenic | 35.0% |
| CACAAAAAAACGTACGGAAA+TGG | + | chr7_4:32720243-32720262 | None:intergenic | 35.0% | |
| ! | GATGACACTGATCAGTTTTA+TGG | - | chr7_4:32720351-32720370 | Msa1149980:intron | 35.0% |
| ! | GTGAATGTGTGTGTGTATTT+TGG | - | chr7_4:32720472-32720491 | Msa1149980:CDS | 35.0% |
| ! | ATGGAGTTGACTTAACCAAA+AGG | - | chr7_4:32720567-32720586 | Msa1149980:intron | 35.0% |
| TGATGCTTAAAACCACCATA+TGG | + | chr7_4:32720909-32720928 | None:intergenic | 35.0% | |
| !! | GAAACTTTTTCTTCCCCTAT+AGG | - | chr7_4:32721493-32721512 | Msa1149980:intron | 35.0% |
| AACGAGTACTTAGACCTATA+GGG | + | chr7_4:32721510-32721529 | None:intergenic | 35.0% | |
| ! | TACTCGTTCACTGCTTTAAA+GGG | - | chr7_4:32721522-32721541 | Msa1149980:CDS | 35.0% |
| ! | ATCATCATGCTTTGGTGATT+CGG | - | chr7_4:32721568-32721587 | Msa1149980:intron | 35.0% |
| !!! | AATCGTTTTTTTGCCTTTGC+AGG | - | chr7_4:32721717-32721736 | Msa1149980:intron | 35.0% |
| GTTAGATTCTCACAGTATAG+AGG | + | chr7_4:32721768-32721787 | None:intergenic | 35.0% | |
| CTATACTGTGAGAATCTAAC+TGG | - | chr7_4:32721768-32721787 | Msa1149980:intron | 35.0% | |
| !! | CTGGTTCTGAAAATTTGTCT+TGG | - | chr7_4:32721787-32721806 | Msa1149980:intron | 35.0% |
| ATCTTATTCCTACACTGTCT+GGG | + | chr7_4:32721863-32721882 | None:intergenic | 35.0% | |
| ! | GTCTCACATTTGATGACATA+TGG | - | chr7_4:32722038-32722057 | Msa1149980:intron | 35.0% |
| CCTTACAAAACCAACTTGAA+AGG | + | chr7_4:32722101-32722120 | None:intergenic | 35.0% | |
| !!! | CCTTTCAAGTTGGTTTTGTA+AGG | - | chr7_4:32722098-32722117 | Msa1149980:intron | 35.0% |
| ! | TATCTAAAGCGTAACTTGAG+TGG | + | chr7_4:32722166-32722185 | None:intergenic | 35.0% |
| GATCATATCTCATCAAGTGA+GGG | + | chr7_4:32722222-32722241 | None:intergenic | 35.0% | |
| AGATCATATCTCATCAAGTG+AGG | + | chr7_4:32722223-32722242 | None:intergenic | 35.0% | |
| CTAACTCAACCCTACAAAAT+CGG | + | chr7_4:32722288-32722307 | None:intergenic | 35.0% | |
| TTCGGCATTCTAATAGGAAA+AGG | - | chr7_4:32722653-32722672 | Msa1149980:intron | 35.0% | |
| TCGGCATTCTAATAGGAAAA+GGG | - | chr7_4:32722654-32722673 | Msa1149980:intron | 35.0% | |
| ! | TTTTGCTTGTCTTCTTCAAC+CGG | - | chr7_4:32722727-32722746 | Msa1149980:intron | 35.0% |
| TGAAAGATAATGCATTGAGC+CGG | + | chr7_4:32722749-32722768 | None:intergenic | 35.0% | |
| TAAACCAATTGAACCATGAC+CGG | - | chr7_4:32722795-32722814 | Msa1149980:intron | 35.0% | |
| !!! | TTTTTTGGTATTGCTTCGTC+GGG | + | chr7_4:32722897-32722916 | None:intergenic | 35.0% |
| AGCAAGTTCTTGTCTGTTTA+AGG | + | chr7_4:32723178-32723197 | None:intergenic | 35.0% | |
| CCAGAAATATTTGATGAACC+TGG | + | chr7_4:32723242-32723261 | None:intergenic | 35.0% | |
| CCAGGTTCATCAAATATTTC+TGG | - | chr7_4:32723239-32723258 | Msa1149980:five_prime_UTR | 35.0% | |
| CATACATAACACTGCAAATG+AGG | + | chr7_4:32723328-32723347 | None:intergenic | 35.0% | |
| CTCATTTGCAGTGTTATGTA+TGG | - | chr7_4:32723326-32723345 | Msa1149980:intron | 35.0% | |
| CCAATGATATCATCGAAGTT+AGG | + | chr7_4:32723602-32723621 | None:intergenic | 35.0% | |
| CCTAACTTCGATGATATCAT+TGG | - | chr7_4:32723599-32723618 | Msa1149980:intron | 35.0% | |
| TGCAATGTAAAGTAGGTTAC+AGG | + | chr7_4:32723771-32723790 | None:intergenic | 35.0% | |
| ATTATCAAAAGCGAAGCTGT+TGG | + | chr7_4:32724009-32724028 | None:intergenic | 35.0% | |
| !! | AGCTTCGCTTTTGATAATCA+CGG | - | chr7_4:32724011-32724030 | Msa1149980:intron | 35.0% |
| GTAGGTAACTTGACATTGAA+AGG | + | chr7_4:32724051-32724070 | None:intergenic | 35.0% | |
| ! | TCTTCTGGAAGATCGAAATT+GGG | + | chr7_4:32724308-32724327 | None:intergenic | 35.0% |
| ! | TTCTTCTGGAAGATCGAAAT+TGG | + | chr7_4:32724309-32724328 | None:intergenic | 35.0% |
| AAGAACTGCGCAAATTCAAA+TGG | - | chr7_4:32724336-32724355 | Msa1149980:intron | 35.0% | |
| AGAACTGCGCAAATTCAAAT+GGG | - | chr7_4:32724337-32724356 | Msa1149980:intron | 35.0% | |
| ! | ACTCTATCGAAGAAAGTATG+TGG | + | chr7_4:32724428-32724447 | None:intergenic | 35.0% |
| ! | AAAGAGTGTACATCTCAAGT+TGG | - | chr7_4:32724850-32724869 | Msa1149980:five_prime_UTR | 35.0% |
| ! | AGGGTACCTGAAAAAGGATA+AGG | + | chr7_4:32720185-32720204 | None:intergenic | 40.0% |
| !! | GGTAAAAGGGTACCTGAAAA+AGG | + | chr7_4:32720191-32720210 | None:intergenic | 40.0% |
| AGTCAACAAGCCATTGTTGT+TGG | + | chr7_4:32720212-32720231 | None:intergenic | 40.0% | |
| ! | TTACCCTTTTCCAAGAAAGG+TGG | - | chr7_4:32720537-32720556 | Msa1149980:intron | 40.0% |
| CTACCACCTTTCTTGGAAAA+GGG | + | chr7_4:32720543-32720562 | None:intergenic | 40.0% | |
| CATAAACCTACCACCTTTCT+TGG | + | chr7_4:32720550-32720569 | None:intergenic | 40.0% | |
| CAAGAAAGGTGGTAGGTTTA+TGG | - | chr7_4:32720548-32720567 | Msa1149980:intron | 40.0% | |
| AACCAAAAGGAGAAAGACTC+TGG | - | chr7_4:32720580-32720599 | Msa1149980:intron | 40.0% | |
| ! | AACCAGAGTCTTTCTCCTTT+TGG | + | chr7_4:32720585-32720604 | None:intergenic | 40.0% |
| !! | GGATGATTTTGACCATATGG+TGG | - | chr7_4:32720894-32720913 | Msa1149980:CDS | 40.0% |
| AGCATCACAAAAGTCAAAGC+AGG | - | chr7_4:32720922-32720941 | Msa1149980:CDS | 40.0% | |
| TGCTCTTTCAAATGCACGTT+TGG | - | chr7_4:32721407-32721426 | Msa1149980:intron | 40.0% | |
| ACGAGTACTTAGACCTATAG+GGG | + | chr7_4:32721509-32721528 | None:intergenic | 40.0% | |
| GAACGAGTACTTAGACCTAT+AGG | + | chr7_4:32721511-32721530 | None:intergenic | 40.0% | |
| GTACTCGTTCACTGCTTTAA+AGG | - | chr7_4:32721521-32721540 | Msa1149980:CDS | 40.0% | |
| !! | CACTGCTTTAAAGGGAAAGA+CGG | - | chr7_4:32721530-32721549 | Msa1149980:CDS | 40.0% |
| ! | CTTTAAAGGGAAAGACGGTA+TGG | - | chr7_4:32721535-32721554 | Msa1149980:CDS | 40.0% |
| !! | TGGTGATTCGGTAAAAAGAC+TGG | - | chr7_4:32721580-32721599 | Msa1149980:intron | 40.0% |
| TAGAGGAAGAGGATTGACAA+AGG | + | chr7_4:32721751-32721770 | None:intergenic | 40.0% | |
| TTCTCACAGTATAGAGGAAG+AGG | + | chr7_4:32721762-32721781 | None:intergenic | 40.0% | |
| ATGCTAAACCCAAGAGTGAA+CGG | - | chr7_4:32721811-32721830 | Msa1149980:intron | 40.0% | |
| ! | CTTGCATCATCTGAAAGCAT+AGG | + | chr7_4:32721837-32721856 | None:intergenic | 40.0% |
| GATCTTATTCCTACACTGTC+TGG | + | chr7_4:32721864-32721883 | None:intergenic | 40.0% | |
| ! | AAAATGAGTTTAGAACCGGG+AGG | - | chr7_4:32722066-32722085 | Msa1149980:intron | 40.0% |
| AAAACCAACTTGAAAGGCGA+GGG | + | chr7_4:32722095-32722114 | None:intergenic | 40.0% | |
| ATTAACACGCTCTTGTGTCT+AGG | + | chr7_4:32722196-32722215 | None:intergenic | 40.0% | |
| !! | ATCTTAGAGGCCGATTTTGT+AGG | - | chr7_4:32722275-32722294 | Msa1149980:intron | 40.0% |
| !! | TCTTAGAGGCCGATTTTGTA+GGG | - | chr7_4:32722276-32722295 | Msa1149980:intron | 40.0% |
| ! | CGATTTTGTAGGGTTGAGTT+AGG | - | chr7_4:32722286-32722305 | Msa1149980:intron | 40.0% |
| TTACTATCGCCTCTTCAGAA+TGG | - | chr7_4:32722508-32722527 | Msa1149980:intron | 40.0% | |
| ! | TGAGCATATCCATTCTGAAG+AGG | + | chr7_4:32722520-32722539 | None:intergenic | 40.0% |
| CGGCATTCTAATAGGAAAAG+GGG | - | chr7_4:32722655-32722674 | Msa1149980:intron | 40.0% | |
| ! | TGGTTTAATCGGTTCAACCA+TGG | + | chr7_4:32722782-32722801 | None:intergenic | 40.0% |
| AACCAGACTGAAAACTGAAC+TGG | + | chr7_4:32722830-32722849 | None:intergenic | 40.0% | |
| GATGTGATAAGGCTTCATTG+CGG | + | chr7_4:32722991-32723010 | None:intergenic | 40.0% | |
| ! | CAATGAAGCCTTATCACATC+AGG | - | chr7_4:32722991-32723010 | Msa1149980:CDS | 40.0% |
| CAATTCCACCTGATGTGATA+AGG | + | chr7_4:32723002-32723021 | None:intergenic | 40.0% | |
| AATGTATGAAGTTAGGCCCT+TGG | - | chr7_4:32723129-32723148 | Msa1149980:intron | 40.0% | |
| CTTCTTGCACAACAGTATTC+TGG | + | chr7_4:32723217-32723236 | None:intergenic | 40.0% | |
| TGGTTGAATAAGCAGCTCTT+TGG | + | chr7_4:32723276-32723295 | None:intergenic | 40.0% | |
| GTAAACAACTAACCAAGGGT+TGG | + | chr7_4:32723296-32723315 | None:intergenic | 40.0% | |
| GACAAGAAACAGATTCACCT+AGG | - | chr7_4:32723912-32723931 | Msa1149980:intron | 40.0% | |
| AAGCTGCTCACTTATATGAC+AGG | - | chr7_4:32723955-32723974 | Msa1149980:intron | 40.0% | |
| ATACCACTGAGTTCAATCGT+CGG | + | chr7_4:32724082-32724101 | None:intergenic | 40.0% | |
| TGAACTCAGTGGTATGAGTT+CGG | - | chr7_4:32724087-32724106 | Msa1149980:intron | 40.0% | |
| TGGTACTAAGACGAAGGTTT+AGG | - | chr7_4:32724119-32724138 | Msa1149980:intron | 40.0% | |
| GGTACTAAGACGAAGGTTTA+GGG | - | chr7_4:32724120-32724139 | Msa1149980:intron | 40.0% | |
| AGTTCTTGCTTCTCTTCTTC+TGG | + | chr7_4:32724323-32724342 | None:intergenic | 40.0% | |
| !! | AGACGCGAGTGTTTTATTGT+CGG | + | chr7_4:32724465-32724484 | None:intergenic | 40.0% |
| ATCCCTTGCACAAAGATGAT+TGG | - | chr7_4:32724627-32724646 | Msa1149980:five_prime_UTR | 40.0% | |
| TCCCTTGCACAAAGATGATT+GGG | - | chr7_4:32724628-32724647 | Msa1149980:five_prime_UTR | 40.0% | |
| TCCCAATCATCTTTGTGCAA+GGG | + | chr7_4:32724632-32724651 | None:intergenic | 40.0% | |
| TTCCCAATCATCTTTGTGCA+AGG | + | chr7_4:32724633-32724652 | None:intergenic | 40.0% | |
| ! | GATGATTGGGAAAGTATGCA+AGG | - | chr7_4:32724641-32724660 | Msa1149980:five_prime_UTR | 40.0% |
| ! | TTAATGGATCTAGCATGAGG+TGG | + | chr7_4:32724739-32724758 | None:intergenic | 40.0% |
| GTTGGACATTGTCAACTTTC+AGG | - | chr7_4:32724868-32724887 | Msa1149980:five_prime_UTR | 40.0% | |
| !! | GAAAAAGAAGGGTGGTGGAA+TGG | + | chr7_4:32719901-32719920 | None:intergenic | 45.0% |
| CATCCTATGAAGCACACACT+CGG | + | chr7_4:32720335-32720354 | None:intergenic | 45.0% | |
| GTTGACTGATGCTCAAGTCT+TGG | - | chr7_4:32720400-32720419 | Msa1149980:CDS | 45.0% | |
| CCTACCACCTTTCTTGGAAA+AGG | + | chr7_4:32720544-32720563 | None:intergenic | 45.0% | |
| ! | CCTTTTCCAAGAAAGGTGGT+AGG | - | chr7_4:32720541-32720560 | Msa1149980:intron | 45.0% |
| GACTATGCTCAGGTACACAT+CGG | - | chr7_4:32721642-32721661 | Msa1149980:intron | 45.0% | |
| AAAGGAACTGCTTCCTGCAA+AGG | + | chr7_4:32721733-32721752 | None:intergenic | 45.0% | |
| CAAAACCAACTTGAAAGGCG+AGG | + | chr7_4:32722096-32722115 | None:intergenic | 45.0% | |
| TTCATCGAACCACCCACTAT+CGG | - | chr7_4:32722139-32722158 | Msa1149980:intron | 45.0% | |
| AACTTGAGTGGTCCGATAGT+GGG | + | chr7_4:32722154-32722173 | None:intergenic | 45.0% | |
| TAACTTGAGTGGTCCGATAG+TGG | + | chr7_4:32722155-32722174 | None:intergenic | 45.0% | |
| GGATGCATCACTGATCTTAG+AGG | - | chr7_4:32722262-32722281 | Msa1149980:intron | 45.0% | |
| TCTTTCATCCGGTTCAACCA+TGG | - | chr7_4:32722762-32722781 | Msa1149980:intron | 45.0% | |
| ! | CACCAGTTCAGTTTTCAGTC+TGG | - | chr7_4:32722825-32722844 | Msa1149980:intron | 45.0% |
| ! | TGAAGCCTTATCACATCAGG+TGG | - | chr7_4:32722994-32723013 | Msa1149980:CDS | 45.0% |
| ACTGTTGTGCAAGAAGAACC+AGG | - | chr7_4:32723221-32723240 | Msa1149980:five_prime_UTR | 45.0% | |
| CTGCTTATTCAACCAACCCT+TGG | - | chr7_4:32723281-32723300 | Msa1149980:intron | 45.0% | |
| TCAAACGTAGGAAGCGACAT+AGG | - | chr7_4:32723808-32723827 | Msa1149980:intron | 45.0% | |
| AGTCAAGAAGTCAGCATGAG+AGG | - | chr7_4:32723846-32723865 | Msa1149980:intron | 45.0% | |
| ! | CAGATTCACCTAGGTACTGT+TGG | - | chr7_4:32723921-32723940 | Msa1149980:intron | 45.0% |
| TACCACTGAGTTCAATCGTC+GGG | + | chr7_4:32724081-32724100 | None:intergenic | 45.0% | |
| TATGAGTTCGGACACTGAAG+TGG | - | chr7_4:32724099-32724118 | Msa1149980:intron | 45.0% | |
| CTGAAGTGGTACTAAGACGA+AGG | - | chr7_4:32724113-32724132 | Msa1149980:intron | 45.0% | |
| ! | TTTAGGGCTGCTTTCATGTG+TGG | - | chr7_4:32724275-32724294 | Msa1149980:intron | 45.0% |
| ! | TTAGGGCTGCTTTCATGTGT+GGG | - | chr7_4:32724276-32724295 | Msa1149980:intron | 45.0% |
| ! | GAAAGTATGCAAGGAGTGAG+TGG | - | chr7_4:32724650-32724669 | Msa1149980:five_prime_UTR | 45.0% |
| !! | AGAAGGGTGGTGGAATGGAA+GGG | + | chr7_4:32719896-32719915 | None:intergenic | 50.0% |
| !! | AAGAAGGGTGGTGGAATGGA+AGG | + | chr7_4:32719897-32719916 | None:intergenic | 50.0% |
| ATGAAGCACACACTCGGACA+CGG | + | chr7_4:32720329-32720348 | None:intergenic | 50.0% | |
| TGTCCGAGTGTGTGCTTCAT+AGG | - | chr7_4:32720329-32720348 | Msa1149980:intron | 50.0% | |
| ! | TGGTAAGCTTAAGAAGGCGC+AGG | - | chr7_4:32721612-32721631 | Msa1149980:intron | 50.0% |
| ! | TTAAGAAGGCGCAGGCTCTT+GGG | - | chr7_4:32721620-32721639 | Msa1149980:intron | 50.0% |
| AGCATAGGCCGTTCACTCTT+GGG | + | chr7_4:32721822-32721841 | None:intergenic | 50.0% | |
| AAGCATAGGCCGTTCACTCT+TGG | + | chr7_4:32721823-32721842 | None:intergenic | 50.0% | |
| GTGGGTGGTTCGATGAATCT+TGG | + | chr7_4:32722136-32722155 | None:intergenic | 50.0% | |
| ! | ACGCTCTTGTGTCTAGGACT+TGG | + | chr7_4:32722190-32722209 | None:intergenic | 50.0% |
| GGATATGCTCAATAGCGCCA+TGG | - | chr7_4:32722529-32722548 | Msa1149980:intron | 50.0% | |
| ATGCTCAATAGCGCCATGGT+TGG | - | chr7_4:32722533-32722552 | Msa1149980:intron | 50.0% | |
| ! | TCGACCACTTTAGCTCGCTT+CGG | - | chr7_4:32722635-32722654 | Msa1149980:intron | 50.0% |
| AATGCCGAAGCGAGCTAAAG+TGG | + | chr7_4:32722642-32722661 | None:intergenic | 50.0% | |
| GCTCGCTTCGGCATTCTAAT+AGG | - | chr7_4:32722647-32722666 | Msa1149980:intron | 50.0% | |
| CGGTTCAACCATGGTTGAAC+CGG | + | chr7_4:32722771-32722790 | None:intergenic | 50.0% | |
| CCTTCCGGTCATGGTTCAAT+TGG | + | chr7_4:32722802-32722821 | None:intergenic | 50.0% | |
| CCAATTGAACCATGACCGGA+AGG | - | chr7_4:32722799-32722818 | Msa1149980:intron | 50.0% | |
| ACTGAACTGGTGAGACCTTC+CGG | + | chr7_4:32722817-32722836 | None:intergenic | 50.0% | |
| GTATTGCTTCGTCGGGAACA+AGG | + | chr7_4:32722890-32722909 | None:intergenic | 50.0% | |
| GTGATAAGGCTTCATTGCGG+TGG | + | chr7_4:32722988-32723007 | None:intergenic | 50.0% | |
| CTTGCGATCCAACAGTACCT+AGG | + | chr7_4:32723932-32723951 | None:intergenic | 50.0% | |
| ACCACTGAGTTCAATCGTCG+GGG | + | chr7_4:32724080-32724099 | None:intergenic | 50.0% | |
| ! | CTTAAGAAGGCGCAGGCTCT+TGG | - | chr7_4:32721619-32721638 | Msa1149980:intron | 55.0% |
| AGGCTCTTGGGACTATGCTC+AGG | - | chr7_4:32721632-32721651 | Msa1149980:intron | 55.0% | |
| GCAAGCATCCCAGACAGTGT+AGG | - | chr7_4:32721852-32721871 | Msa1149980:intron | 55.0% | |
| ! | GCATCCCTCGCCTTTCAAGT+TGG | - | chr7_4:32722088-32722107 | Msa1149980:intron | 55.0% |
| !! | TTGAGTGGTCCGATAGTGGG+TGG | + | chr7_4:32722151-32722170 | None:intergenic | 55.0% |
| CAGGACCTGCTGTCAAACGT+AGG | - | chr7_4:32723796-32723815 | Msa1149980:intron | 55.0% | |
| CGCTTCCTACGTTTGACAGC+AGG | + | chr7_4:32723804-32723823 | None:intergenic | 55.0% | |
| CAATCGTCGGGGACAGAAGT+AGG | + | chr7_4:32724069-32724088 | None:intergenic | 55.0% | |
| TCCCCGACGATTGAACTCAG+TGG | - | chr7_4:32724076-32724095 | Msa1149980:intron | 55.0% | |
| !! | AGGGTGGTGGAATGGAAGGG+TGG | + | chr7_4:32719893-32719912 | None:intergenic | 60.0% |
| ACACACTCGGACACGGACAC+CGG | + | chr7_4:32720322-32720341 | None:intergenic | 60.0% | |
| CTGGTGAGACCTTCCGGTCA+TGG | + | chr7_4:32722811-32722830 | None:intergenic | 60.0% | |
| GAAAGGCGAGGGATGCCTCC+CGG | + | chr7_4:32722084-32722103 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 32719818 | 32724980 | 32719818 | ID=Msa1149980;Name=Msa1149980 |
| chr7_4 | mRNA | 32719818 | 32724980 | 32719818 | ID=Msa1149980-mRNA-1;Parent=Msa1149980;Name=Msa1149980-mRNA-1;_AED=0.25;_eAED=0.25;_QI=526|0.83|0.85|1|0.83|0.71|7|262|239 |
| chr7_4 | exon | 32719818 | 32720219 | 32719818 | ID=Msa1149980-mRNA-1:exon:7811;Parent=Msa1149980-mRNA-1 |
| chr7_4 | exon | 32720397 | 32720518 | 32720397 | ID=Msa1149980-mRNA-1:exon:7810;Parent=Msa1149980-mRNA-1 |
| chr7_4 | exon | 32720822 | 32720999 | 32720822 | ID=Msa1149980-mRNA-1:exon:7809;Parent=Msa1149980-mRNA-1 |
| chr7_4 | exon | 32721496 | 32721580 | 32721496 | ID=Msa1149980-mRNA-1:exon:7808;Parent=Msa1149980-mRNA-1 |
| chr7_4 | exon | 32722908 | 32723059 | 32722908 | ID=Msa1149980-mRNA-1:exon:7807;Parent=Msa1149980-mRNA-1 |
| chr7_4 | exon | 32723145 | 32723283 | 32723145 | ID=Msa1149980-mRNA-1:exon:7806;Parent=Msa1149980-mRNA-1 |
| chr7_4 | exon | 32724551 | 32724980 | 32724551 | ID=Msa1149980-mRNA-1:exon:7805;Parent=Msa1149980-mRNA-1 |
| chr7_4 | five_prime_UTR | 32724551 | 32724980 | 32724551 | ID=Msa1149980-mRNA-1:five_prime_utr;Parent=Msa1149980-mRNA-1 |
| chr7_4 | five_prime_UTR | 32723188 | 32723283 | 32723188 | ID=Msa1149980-mRNA-1:five_prime_utr;Parent=Msa1149980-mRNA-1 |
| chr7_4 | CDS | 32723145 | 32723187 | 32723145 | ID=Msa1149980-mRNA-1:cds;Parent=Msa1149980-mRNA-1 |
| chr7_4 | CDS | 32722908 | 32723059 | 32722908 | ID=Msa1149980-mRNA-1:cds;Parent=Msa1149980-mRNA-1 |
| chr7_4 | CDS | 32721496 | 32721580 | 32721496 | ID=Msa1149980-mRNA-1:cds;Parent=Msa1149980-mRNA-1 |
| chr7_4 | CDS | 32720822 | 32720999 | 32720822 | ID=Msa1149980-mRNA-1:cds;Parent=Msa1149980-mRNA-1 |
| chr7_4 | CDS | 32720397 | 32720518 | 32720397 | ID=Msa1149980-mRNA-1:cds;Parent=Msa1149980-mRNA-1 |
| chr7_4 | CDS | 32720080 | 32720219 | 32720080 | ID=Msa1149980-mRNA-1:cds;Parent=Msa1149980-mRNA-1 |
| chr7_4 | three_prime_UTR | 32719818 | 32720079 | 32719818 | ID=Msa1149980-mRNA-1:three_prime_utr;Parent=Msa1149980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
