Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059290 | XP_039684248.1 | 82.427 | 239 | 7 | 3 | 1 | 239 | 1 | 204 | 4.53e-135 | 388 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059290 | sp|Q56XP9|ERFL1_ARATH | 67.708 | 96 | 30 | 1 | 108 | 202 | 109 | 204 | 2.80e-37 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059290 | A0A072U9S6 | 89.540 | 239 | 10 | 2 | 1 | 239 | 1 | 224 | 2.68e-127 | 369 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1059290 | TF | AP2/ERF-ERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0667710 | Msa1059290 | 0.800992 | 1.110966e-48 | -8.615850e-47 |
| Msa1059290 | Msa1149980 | 0.848155 | 7.337455e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059290 | MtrunA17_Chr7g0235291 | 89.540 | 239 | 10 | 2 | 1 | 239 | 1 | 224 | 5.17e-131 | 369 |
| Msa1059290 | MtrunA17_Chr8g0339471 | 63.333 | 240 | 87 | 1 | 1 | 239 | 1 | 240 | 3.54e-87 | 258 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059290 | AT4G13040.8 | 67.708 | 96 | 30 | 1 | 108 | 202 | 79 | 174 | 1.39e-38 | 133 |
| Msa1059290 | AT4G13040.4 | 67.708 | 96 | 30 | 1 | 108 | 202 | 79 | 174 | 1.39e-38 | 133 |
| Msa1059290 | AT4G13040.6 | 67.708 | 96 | 30 | 1 | 108 | 202 | 53 | 148 | 2.69e-38 | 131 |
| Msa1059290 | AT4G13040.2 | 67.708 | 96 | 30 | 1 | 108 | 202 | 53 | 148 | 2.69e-38 | 131 |
| Msa1059290 | AT4G13040.1 | 67.708 | 96 | 30 | 1 | 108 | 202 | 109 | 204 | 2.84e-38 | 133 |
| Msa1059290 | AT4G13040.3 | 67.708 | 96 | 30 | 1 | 108 | 202 | 129 | 224 | 7.20e-38 | 132 |
| Msa1059290 | AT4G13040.5 | 70.115 | 87 | 25 | 1 | 108 | 193 | 53 | 139 | 1.49e-37 | 129 |
| Msa1059290 | AT4G13040.7 | 70.115 | 87 | 25 | 1 | 108 | 193 | 109 | 195 | 3.92e-37 | 130 |
Find 78 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTGGAAGATCGAAAT+TGG | 0.170910 | 7_2:-45256100 | None:intergenic |
| AAGCCATTGTTGTTGGTAAA+AGG | 0.176354 | 7_2:-45251878 | None:intergenic |
| GTACTCGTTCACTGCTTTAA+AGG | 0.199836 | 7_2:+45253178 | Msa1059290:five_prime_UTR |
| CCAGGTTCATCAAATATTTC+TGG | 0.203815 | 7_2:+45254903 | Msa1059290:CDS |
| GTTGGACATTGTCAACTTTC+AGG | 0.212580 | 7_2:+45256660 | Msa1059290:three_prime_UTR |
| AAAAGAAAGAAGGGGTTTAT+AGG | 0.268622 | 7_2:-45251789 | None:intergenic |
| ATTCAAATGGGATGATTTCT+TGG | 0.268781 | 7_2:+45256143 | Msa1059290:CDS |
| AAATAAATGTTGCATTAGTT+TGG | 0.302451 | 7_2:-45256706 | None:intergenic |
| ATCATCATGCTTTGGTGATT+CGG | 0.340271 | 7_2:+45253225 | Msa1059290:five_prime_UTR |
| TACTCGTTCACTGCTTTAAA+GGG | 0.347019 | 7_2:+45253179 | Msa1059290:five_prime_UTR |
| GGTAAAAGGGTACCTGAAAA+AGG | 0.350898 | 7_2:-45251864 | None:intergenic |
| TTAGTTTGGTGAATTTATTA+AGG | 0.353329 | 7_2:-45256692 | None:intergenic |
| AGTTCCTGCTTCTCTTCTTC+TGG | 0.357591 | 7_2:-45256114 | None:intergenic |
| CTTAAGAAGGCGCAGGCTCT+TGG | 0.364636 | 7_2:+45253276 | Msa1059290:CDS |
| GATCTTATTCCTACACTGTC+TGG | 0.388027 | 7_2:-45253518 | None:intergenic |
| GAAAATTAATCATCATGCTT+TGG | 0.388375 | 7_2:+45253217 | Msa1059290:five_prime_UTR |
| TGGTTGAATAAGCAGCTCTT+TGG | 0.393760 | 7_2:-45254937 | None:intergenic |
| AAGCATAGGCCGTTCACTCT+TGG | 0.399260 | 7_2:-45253477 | None:intergenic |
| AGCATAGGCCGTTCACTCTT+GGG | 0.403215 | 7_2:-45253476 | None:intergenic |
| CTATACTGTGAGAATCTAAC+TGG | 0.406180 | 7_2:+45253425 | Msa1059290:CDS |
| ATCCCTTGCACAAAGATGAT+TGG | 0.416704 | 7_2:+45256419 | Msa1059290:CDS |
| TTAAGAAGGCGCAGGCTCTT+GGG | 0.424765 | 7_2:+45253277 | Msa1059290:CDS |
| TGCTTATGAAGATGCAGATC+AGG | 0.425168 | 7_2:+45256471 | Msa1059290:CDS |
| AAAGATTATTAATGCTATCA+AGG | 0.426305 | 7_2:-45256583 | None:intergenic |
| AGGAACTGCGCAAATTCAAA+TGG | 0.429554 | 7_2:+45256130 | Msa1059290:CDS |
| GTGGTATAATTGAATCTTGA+TGG | 0.432688 | 7_2:-45251547 | None:intergenic |
| AGCCATTGTTGTTGGTAAAA+GGG | 0.433119 | 7_2:-45251877 | None:intergenic |
| AAGAAGGGTGGTGGAATGGA+AGG | 0.433672 | 7_2:-45251570 | None:intergenic |
| TCCCTTGCACAAAGATGATT+GGG | 0.444367 | 7_2:+45256420 | Msa1059290:CDS |
| AGTCAACAAGCCATTGTTGT+TGG | 0.447476 | 7_2:-45251885 | None:intergenic |
| AATCTTAAGGAAAAGAAAGA+AGG | 0.449854 | 7_2:-45251799 | None:intergenic |
| CTGGTTCTGAAAATTTGTCT+TGG | 0.459968 | 7_2:+45253444 | Msa1059290:CDS |
| TCTTCTGGAAGATCGAAATT+GGG | 0.470661 | 7_2:-45256099 | None:intergenic |
| GGGGTTTATAGGAATATTGA+AGG | 0.470955 | 7_2:-45251778 | None:intergenic |
| TTAGGGCTGCTTTCATGTGT+GGG | 0.471609 | 7_2:+45256070 | Msa1059290:intron |
| TTTAGGGCTGCTTTCATGTG+TGG | 0.474978 | 7_2:+45256069 | Msa1059290:intron |
| TTCTCACAGTATAGAGGAAG+AGG | 0.479128 | 7_2:-45253416 | None:intergenic |
| GTTAGATTCTCACAGTATAG+AGG | 0.486663 | 7_2:-45253422 | None:intergenic |
| CTGCTTATTCAACCAACCCT+TGG | 0.488352 | 7_2:+45254945 | Msa1059290:CDS |
| ATCTAAGTGAGAAAATCTTA+AGG | 0.492378 | 7_2:-45251812 | None:intergenic |
| TCTTCCAGAAGAAGAGAAGC+AGG | 0.502807 | 7_2:+45256110 | Msa1059290:CDS |
| ATCTTAAGGAAAAGAAAGAA+GGG | 0.506714 | 7_2:-45251798 | None:intergenic |
| CCAGAAATATTTGATGAACC+TGG | 0.508695 | 7_2:-45254903 | None:intergenic |
| TTCCCAATCATCTTTGTGCA+AGG | 0.511091 | 7_2:-45256422 | None:intergenic |
| AGGCTCTTGGGACTATGCTC+AGG | 0.512795 | 7_2:+45253289 | Msa1059290:CDS |
| TCCCAATCATCTTTGTGCAA+GGG | 0.517342 | 7_2:-45256421 | None:intergenic |
| ATCTTATTCCTACACTGTCT+GGG | 0.537378 | 7_2:-45253517 | None:intergenic |
| GGAACTGCGCAAATTCAAAT+GGG | 0.547529 | 7_2:+45256131 | Msa1059290:CDS |
| AATAACACACAATACAAAAG+AGG | 0.549296 | 7_2:+45251630 | Msa1059290:five_prime_UTR |
| CTTTAAAGGGAAAGACGGTA+TGG | 0.554839 | 7_2:+45253192 | Msa1059290:five_prime_UTR |
| AGTCAAGAAGTCAGCATGAG+AGG | 0.556795 | 7_2:+45255501 | Msa1059290:CDS |
| AAGCTGCTCACTTATATGAC+AGG | 0.561672 | 7_2:+45255610 | Msa1059290:CDS |
| TAACAATGGTAAGCTTAAGA+AGG | 0.566278 | 7_2:+45253263 | Msa1059290:exon |
| CACTGCTTTAAAGGGAAAGA+CGG | 0.566321 | 7_2:+45253187 | Msa1059290:five_prime_UTR |
| AGGGTGGTGGAATGGAAGGG+TGG | 0.566580 | 7_2:-45251566 | None:intergenic |
| AGAAGGGTGGTGGAATGGAA+GGG | 0.567468 | 7_2:-45251569 | None:intergenic |
| TCAAACGTAGGAAGCGACAT+AGG | 0.588875 | 7_2:+45255463 | Msa1059290:CDS |
| GATGATTGGGAAAGTATGCA+AGG | 0.596433 | 7_2:+45256433 | Msa1059290:CDS |
| TGGTAAGCTTAAGAAGGCGC+AGG | 0.598870 | 7_2:+45253269 | Msa1059290:CDS |
| AACACACAATACAAAAGAGG+AGG | 0.600645 | 7_2:+45251633 | Msa1059290:five_prime_UTR |
| ATGCTAAACCCAAGAGTGAA+CGG | 0.601380 | 7_2:+45253468 | Msa1059290:CDS |
| ACTGTTGTGCAAGAAGAACC+AGG | 0.605854 | 7_2:+45254885 | Msa1059290:CDS |
| AGGAATATTGAAGGAAGACA+AGG | 0.607502 | 7_2:-45251769 | None:intergenic |
| ATGAGATAATGTGTGTGTTG+TGG | 0.607518 | 7_2:-45251730 | None:intergenic |
| CTTGCGATCCAACAGTACCT+AGG | 0.608114 | 7_2:-45255584 | None:intergenic |
| AAAGAGTGTACATCTCAAGT+TGG | 0.610547 | 7_2:+45256642 | Msa1059290:three_prime_UTR |
| CTTGCATCATCTGAAAGCAT+AGG | 0.615914 | 7_2:-45253491 | None:intergenic |
| TAGAGGAAGAGGATTGACAA+AGG | 0.618981 | 7_2:-45253405 | None:intergenic |
| TCTTAAGGAAAAGAAAGAAG+GGG | 0.619203 | 7_2:-45251797 | None:intergenic |
| GAAAGTATGCAAGGAGTGAG+TGG | 0.620825 | 7_2:+45256442 | Msa1059290:CDS |
| AATATTGAAGGAAGACAAGG+TGG | 0.633313 | 7_2:-45251766 | None:intergenic |
| GTAAACAACTAACCAAGGGT+TGG | 0.634157 | 7_2:-45254957 | None:intergenic |
| GCAAGCATCCCAGACAGTGT+AGG | 0.639402 | 7_2:+45253509 | Msa1059290:CDS |
| ACACACAATACAAAAGAGGA+GGG | 0.642777 | 7_2:+45251634 | Msa1059290:five_prime_UTR |
| TAATTAATGGATCTAGCATG+AGG | 0.667121 | 7_2:-45256531 | None:intergenic |
| TTAATGGATCTAGCATGAGG+TGG | 0.688743 | 7_2:-45256528 | None:intergenic |
| CAGGACCTGCTGTCAAACGT+AGG | 0.692659 | 7_2:+45255451 | Msa1059290:intron |
| GACAAGAAACAGATTCACCT+AGG | 0.711667 | 7_2:+45255567 | Msa1059290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTATCTTTTTTTCAT+TGG | + | chr7_2:45253660-45253679 | Msa1059290:intron | 10.0% |
| !! | TAAAATATACTTAAATAAGT+TGG | - | chr7_2:45255327-45255346 | None:intergenic | 10.0% |
| !!! | ATTTTCTACAATATAATTAA+TGG | - | chr7_2:45256547-45256566 | None:intergenic | 10.0% |
| !! | AAGAAAATAAAGAAAAAGAA+GGG | - | chr7_2:45251588-45251607 | None:intergenic | 15.0% |
| !! | TAAAAAAAAAAACCCATTAA+AGG | - | chr7_2:45252116-45252135 | None:intergenic | 15.0% |
| !!! | AAATTAGTTTCAGTTTTAAA+AGG | + | chr7_2:45252402-45252421 | Msa1059290:intron | 15.0% |
| !!! | AATTAGTTTCAGTTTTAAAA+GGG | + | chr7_2:45252403-45252422 | Msa1059290:intron | 15.0% |
| !!! | TATTTTCATAAGTTATCTTT+GGG | + | chr7_2:45252924-45252943 | Msa1059290:intron | 15.0% |
| !! | TAAATCAAAAACGATTTATT+TGG | - | chr7_2:45255041-45255060 | None:intergenic | 15.0% |
| !!! | AAATAAATCGTTTTTGATTT+AGG | + | chr7_2:45255040-45255059 | Msa1059290:intron | 15.0% |
| !!! | TTAAACTTTTCATATTTCAT+AGG | + | chr7_2:45255295-45255314 | Msa1059290:intron | 15.0% |
| !!! | CTTATTTAAGTATATTTTAC+TGG | + | chr7_2:45255328-45255347 | Msa1059290:intron | 15.0% |
| !! | GAAGAAAATAAAGAAAAAGA+AGG | - | chr7_2:45251589-45251608 | None:intergenic | 20.0% |
| !! | AAAACAAAAACAGAAACAAA+AGG | + | chr7_2:45251692-45251711 | Msa1059290:five_prime_UTR | 20.0% |
| !! | TTTCTATAGTTTCCTTTAAT+GGG | + | chr7_2:45252101-45252120 | Msa1059290:intron | 20.0% |
| !! | TAAATACTCAAAACATTGAA+TGG | - | chr7_2:45252312-45252331 | None:intergenic | 20.0% |
| !!! | ATTCAATGTTTTGAGTATTT+AGG | + | chr7_2:45252311-45252330 | Msa1059290:intron | 20.0% |
| !! | GATTTGAATTATGTTTACAA+AGG | + | chr7_2:45252465-45252484 | Msa1059290:intron | 20.0% |
| !!! | CTATTTTCATAAGTTATCTT+TGG | + | chr7_2:45252923-45252942 | Msa1059290:intron | 20.0% |
| !! | AATAAGTCAAAAACAGTTTA+TGG | + | chr7_2:45252957-45252976 | Msa1059290:intron | 20.0% |
| !! | AGCATATTTACAACTTATTT+GGG | - | chr7_2:45253048-45253067 | None:intergenic | 20.0% |
| !! | CTTTAAACAGATTTATCAAT+AGG | - | chr7_2:45253604-45253623 | None:intergenic | 20.0% |
| !!! | ATTGAACATTTTGAAATGAA+TGG | - | chr7_2:45254043-45254062 | None:intergenic | 20.0% |
| !!! | AGATGAAAAATATTTTGAAG+AGG | + | chr7_2:45254334-45254353 | Msa1059290:intron | 20.0% |
| !!! | CTGATAAAATATAGCTTTTT+TGG | - | chr7_2:45254568-45254587 | None:intergenic | 20.0% |
| !!! | TCATTCTAGTTTTTAAAAGA+CGG | - | chr7_2:45254591-45254610 | None:intergenic | 20.0% |
| !! | AATCAGAATAAATGTTTACA+AGG | + | chr7_2:45254756-45254775 | Msa1059290:intron | 20.0% |
| !!! | AATTTTAGTGGTTAATTTGA+GGG | - | chr7_2:45255832-45255851 | None:intergenic | 20.0% |
| !!! | AAATTTTAGTGGTTAATTTG+AGG | - | chr7_2:45255833-45255852 | None:intergenic | 20.0% |
| !! | CACAAAATAAAATATCTTGT+CGG | + | chr7_2:45255883-45255902 | Msa1059290:intron | 20.0% |
| !!! | AAAGAATGAGAGTATAAATT+TGG | + | chr7_2:45255920-45255939 | Msa1059290:intron | 20.0% |
| !! | AAAGATTATTAATGCTATCA+AGG | - | chr7_2:45256586-45256605 | None:intergenic | 20.0% |
| !!! | TTAGTTTGGTGAATTTATTA+AGG | - | chr7_2:45256695-45256714 | None:intergenic | 20.0% |
| !! | AAATAAATGTTGCATTAGTT+TGG | - | chr7_2:45256709-45256728 | None:intergenic | 20.0% |
| ! | AAAATAAAGAAAAAGAAGGG+TGG | - | chr7_2:45251585-45251604 | None:intergenic | 25.0% |
| ! | AATAACACACAATACAAAAG+AGG | + | chr7_2:45251630-45251649 | Msa1059290:five_prime_UTR | 25.0% |
| ! | ATCTTAAGGAAAAGAAAGAA+GGG | - | chr7_2:45251801-45251820 | None:intergenic | 25.0% |
| ! | AATCTTAAGGAAAAGAAAGA+AGG | - | chr7_2:45251802-45251821 | None:intergenic | 25.0% |
| ! | ATCTAAGTGAGAAAATCTTA+AGG | - | chr7_2:45251815-45251834 | None:intergenic | 25.0% |
| ! | AAAAGACACAAAAAAACGTA+CGG | - | chr7_2:45251925-45251944 | None:intergenic | 25.0% |
| ! | AAGGAAACTAAATGAAAGAA+AGG | - | chr7_2:45251957-45251976 | None:intergenic | 25.0% |
| ! | GACATGACAACATATAAAAA+AGG | - | chr7_2:45251976-45251995 | None:intergenic | 25.0% |
| !! | TTTTTATATGTTGTCATGTC+CGG | + | chr7_2:45251976-45251995 | Msa1059290:intron | 25.0% |
| ! | CTTTCTATAGTTTCCTTTAA+TGG | + | chr7_2:45252100-45252119 | Msa1059290:intron | 25.0% |
| ! | TTGTTTCATTAAGCAAAACT+AGG | + | chr7_2:45252334-45252353 | Msa1059290:intron | 25.0% |
| !!! | TCTTTTGAGAAAAACAAAGT+TGG | - | chr7_2:45252363-45252382 | None:intergenic | 25.0% |
| !!! | AAGATTTGTTTTGTCTTCTT+TGG | + | chr7_2:45252379-45252398 | Msa1059290:intron | 25.0% |
| !!! | GCTTTTTGCTATGATAAAAT+TGG | + | chr7_2:45252436-45252455 | Msa1059290:intron | 25.0% |
| !! | GTTTACAAAGGTTTATTTCT+AGG | + | chr7_2:45252477-45252496 | Msa1059290:intron | 25.0% |
| ! | TTTGTATCTGTACTTGTTTA+TGG | + | chr7_2:45252542-45252561 | Msa1059290:intron | 25.0% |
| ! | AGTTATACTACAAAAAGCAA+TGG | - | chr7_2:45252738-45252757 | None:intergenic | 25.0% |
| ! | AAAGGCAAAATGCATATTTA+GGG | - | chr7_2:45252779-45252798 | None:intergenic | 25.0% |
| ! | TAAAGGCAAAATGCATATTT+AGG | - | chr7_2:45252780-45252799 | None:intergenic | 25.0% |
| !!! | ACTTATTTGGGCTTATTTTA+TGG | - | chr7_2:45253036-45253055 | None:intergenic | 25.0% |
| ! | GAGCATATTTACAACTTATT+TGG | - | chr7_2:45253049-45253068 | None:intergenic | 25.0% |
| ! | TTGAAATTTACAGCATTCTT+TGG | + | chr7_2:45253104-45253123 | Msa1059290:intron | 25.0% |
| ! | GAAAATTAATCATCATGCTT+TGG | + | chr7_2:45253217-45253236 | Msa1059290:five_prime_UTR | 25.0% |
| ! | AATAAAAGTCCTCATTGAAA+TGG | - | chr7_2:45253645-45253664 | None:intergenic | 25.0% |
| !! | AATGTCTTAGAATTTAGGTT+AGG | - | chr7_2:45253968-45253987 | None:intergenic | 25.0% |
| !!! | TCTTCTTTTCTCTAAGATTT+TGG | + | chr7_2:45254217-45254236 | Msa1059290:intron | 25.0% |
| !!! | TAAGATTTTGGCTAGTTATT+TGG | + | chr7_2:45254229-45254248 | Msa1059290:intron | 25.0% |
| !! | TTGAAGAGGAAGTTTAAAAT+TGG | + | chr7_2:45254348-45254367 | Msa1059290:intron | 25.0% |
| !!! | TTTTTGATTTAGGATCTGTT+TGG | + | chr7_2:45255050-45255069 | Msa1059290:intron | 25.0% |
| !! | TGTTTGGAACTATTAGTAAT+TGG | + | chr7_2:45255066-45255085 | Msa1059290:intron | 25.0% |
| ! | TAGTTTATTTCATACTAGAG+TGG | + | chr7_2:45255132-45255151 | Msa1059290:intron | 25.0% |
| ! | AGTTTATTTCATACTAGAGT+GGG | + | chr7_2:45255133-45255152 | Msa1059290:intron | 25.0% |
| ! | TAATTAACATACACACGTTA+GGG | - | chr7_2:45255220-45255239 | None:intergenic | 25.0% |
| ! | TAGATATCTTAAAACTGTTG+CGG | + | chr7_2:45255238-45255257 | Msa1059290:intron | 25.0% |
| ! | AAAGCTAATAGAGAATTTGA+TGG | - | chr7_2:45255384-45255403 | None:intergenic | 25.0% |
| ! | TGTACTTCAAAAATATGAAG+TGG | + | chr7_2:45255526-45255545 | Msa1059290:CDS | 25.0% |
| ! | TAACAACATTATAGAACTCA+AGG | - | chr7_2:45255641-45255660 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGGTTAATTTGAG+GGG | - | chr7_2:45255831-45255850 | None:intergenic | 25.0% |
| !! | AGTTCGTATGAAAATTTTAG+TGG | - | chr7_2:45255844-45255863 | None:intergenic | 25.0% |
| !! | AATGAGAGTATAAATTTGGT+GGG | + | chr7_2:45255924-45255943 | Msa1059290:intron | 25.0% |
| !! | TTTTCATACTAAGTAGATCA+TGG | - | chr7_2:45256036-45256055 | None:intergenic | 25.0% |
| !! | AAAAACATCTCTTTTCCTTT+AGG | + | chr7_2:45256052-45256071 | Msa1059290:intron | 25.0% |
| !! | AAAACATCTCTTTTCCTTTA+GGG | + | chr7_2:45256053-45256072 | Msa1059290:intron | 25.0% |
| ! | TATAACTGAATACATGTGTA+TGG | + | chr7_2:45256281-45256300 | Msa1059290:intron | 25.0% |
| !!! | ATTTATTTTCTTCTGTGCAA+TGG | + | chr7_2:45256721-45256740 | Msa1059290:three_prime_UTR | 25.0% |
| GTGGTATAATTGAATCTTGA+TGG | - | chr7_2:45251550-45251569 | None:intergenic | 30.0% | |
| ACAAAAACAGAAACAAAAGG+TGG | + | chr7_2:45251695-45251714 | Msa1059290:five_prime_UTR | 30.0% | |
| AAAAGAAAGAAGGGGTTTAT+AGG | - | chr7_2:45251792-45251811 | None:intergenic | 30.0% | |
| TCTTAAGGAAAAGAAAGAAG+GGG | - | chr7_2:45251800-45251819 | None:intergenic | 30.0% | |
| ACAAAAAAACGTACGGAAAT+GGG | - | chr7_2:45251918-45251937 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTTGTGATTTGTG+TGG | + | chr7_2:45252160-45252179 | Msa1059290:intron | 30.0% |
| ! | TTATTACCCTTTTCCAAGAA+AGG | + | chr7_2:45252206-45252225 | Msa1059290:intron | 30.0% |
| !! | TTTATGGATGATTTTGACCA+TGG | + | chr7_2:45252558-45252577 | Msa1059290:intron | 30.0% |
| ! | CATTGTTTAGTGTCAACTTT+TGG | + | chr7_2:45252672-45252691 | Msa1059290:intron | 30.0% |
| ! | GGTGATTTTCTACCTATTTT+TGG | + | chr7_2:45252693-45252712 | Msa1059290:intron | 30.0% |
| CTAGTTATAGGACCAAAAAT+AGG | - | chr7_2:45252708-45252727 | None:intergenic | 30.0% | |
| !!! | CTATTTTTGGTCCTATAACT+AGG | + | chr7_2:45252706-45252725 | Msa1059290:intron | 30.0% |
| ! | AATGGTCTTTTCCTAGTTAT+AGG | - | chr7_2:45252720-45252739 | None:intergenic | 30.0% |
| ! | CATTTTGCCTTTACTAATTG+TGG | + | chr7_2:45252787-45252806 | Msa1059290:intron | 30.0% |
| AAACACACCACAATTAGTAA+AGG | - | chr7_2:45252797-45252816 | None:intergenic | 30.0% | |
| TTTACTAATTGTGGTGTGTT+TGG | + | chr7_2:45252796-45252815 | Msa1059290:intron | 30.0% | |
| !! | ATAAGCTGTTTTCATGAACA+CGG | + | chr7_2:45252995-45253014 | Msa1059290:intron | 30.0% |
| AAAAAGACTGGAACTAACAA+TGG | + | chr7_2:45253249-45253268 | Msa1059290:exon | 30.0% | |
| TAACAATGGTAAGCTTAAGA+AGG | + | chr7_2:45253263-45253282 | Msa1059290:exon | 30.0% | |
| ! | GATTCAAAAGCATGATGAAT+AGG | - | chr7_2:45253329-45253348 | None:intergenic | 30.0% |
| ! | TTTGACTTTCCATTTCAATG+AGG | + | chr7_2:45253633-45253652 | Msa1059290:intron | 30.0% |
| ! | CTGAAAAATGAGTTTAGAAC+CGG | + | chr7_2:45253719-45253738 | Msa1059290:intron | 30.0% |
| ! | TGAAAAATGAGTTTAGAACC+GGG | + | chr7_2:45253720-45253739 | Msa1059290:intron | 30.0% |
| GAAGCAATGTCTTAGAATTT+AGG | - | chr7_2:45253973-45253992 | None:intergenic | 30.0% | |
| TCTGATTCAATTGAAAGATC+AGG | + | chr7_2:45253991-45254010 | Msa1059290:intron | 30.0% | |
| AAAGAAGAATTATCCAACCA+TGG | - | chr7_2:45254205-45254224 | None:intergenic | 30.0% | |
| TGATACTCAGTAATCATCAT+TGG | + | chr7_2:45254262-45254281 | Msa1059290:intron | 30.0% | |
| TCAATGCATTATCTTTCATC+CGG | + | chr7_2:45254407-45254426 | Msa1059290:intron | 30.0% | |
| ! | CATGGTTCAATTGGTTTAAT+CGG | - | chr7_2:45254449-45254468 | None:intergenic | 30.0% |
| CATAGTAAACAACTAACCAA+GGG | - | chr7_2:45254964-45254983 | None:intergenic | 30.0% | |
| ACATAGTAAACAACTAACCA+AGG | - | chr7_2:45254965-45254984 | None:intergenic | 30.0% | |
| AATTAACATACACACGTTAG+GGG | - | chr7_2:45255219-45255238 | None:intergenic | 30.0% | |
| CTAATTAACATACACACGTT+AGG | - | chr7_2:45255221-45255240 | None:intergenic | 30.0% | |
| TGCTAAATGCAATGTAAAGT+AGG | - | chr7_2:45255433-45255452 | None:intergenic | 30.0% | |
| TACTTTACATTGCATTTAGC+AGG | + | chr7_2:45255432-45255451 | Msa1059290:intron | 30.0% | |
| ! | GAATGAGAGTATAAATTTGG+TGG | + | chr7_2:45255923-45255942 | Msa1059290:intron | 30.0% |
| ATTCAAATGGGATGATTTCT+TGG | + | chr7_2:45256143-45256162 | Msa1059290:CDS | 30.0% | |
| ! | ATTCAGTTATATTTGAGACG+CGG | - | chr7_2:45256272-45256291 | None:intergenic | 30.0% |
| GAAAACAAGTAATATCTAGC+AGG | - | chr7_2:45256317-45256336 | None:intergenic | 30.0% | |
| !! | CAAGATTATTTTGCAGTTCT+GGG | - | chr7_2:45256393-45256412 | None:intergenic | 30.0% |
| !! | TCAAGATTATTTTGCAGTTC+TGG | - | chr7_2:45256394-45256413 | None:intergenic | 30.0% |
| ! | TAATTAATGGATCTAGCATG+AGG | - | chr7_2:45256534-45256553 | None:intergenic | 30.0% |
| ATAAAGAAAAAGAAGGGTGG+TGG | - | chr7_2:45251582-45251601 | None:intergenic | 35.0% | |
| AACACACAATACAAAAGAGG+AGG | + | chr7_2:45251633-45251652 | Msa1059290:five_prime_UTR | 35.0% | |
| ACACACAATACAAAAGAGGA+GGG | + | chr7_2:45251634-45251653 | Msa1059290:five_prime_UTR | 35.0% | |
| ATGAGATAATGTGTGTGTTG+TGG | - | chr7_2:45251733-45251752 | None:intergenic | 35.0% | |
| AATATTGAAGGAAGACAAGG+TGG | - | chr7_2:45251769-45251788 | None:intergenic | 35.0% | |
| AGGAATATTGAAGGAAGACA+AGG | - | chr7_2:45251772-45251791 | None:intergenic | 35.0% | |
| GGGGTTTATAGGAATATTGA+AGG | - | chr7_2:45251781-45251800 | None:intergenic | 35.0% | |
| ! | TTGTCACCTTATCCTTTTTC+AGG | + | chr7_2:45251852-45251871 | Msa1059290:five_prime_UTR | 35.0% |
| ! | TACCCTTTTACCAACAACAA+TGG | + | chr7_2:45251875-45251894 | Msa1059290:five_prime_UTR | 35.0% |
| ! | AGCCATTGTTGTTGGTAAAA+GGG | - | chr7_2:45251880-45251899 | None:intergenic | 35.0% |
| ! | AAGCCATTGTTGTTGGTAAA+AGG | - | chr7_2:45251881-45251900 | None:intergenic | 35.0% |
| CACAAAAAAACGTACGGAAA+TGG | - | chr7_2:45251919-45251938 | None:intergenic | 35.0% | |
| ! | GATGACACTGATCAGTTTTA+TGG | + | chr7_2:45252027-45252046 | Msa1059290:intron | 35.0% |
| ! | GTGAATGTGTGTGTGTATTT+TGG | + | chr7_2:45252144-45252163 | Msa1059290:intron | 35.0% |
| ! | TGTGATTTGTGTGGTCAAAA+TGG | + | chr7_2:45252169-45252188 | Msa1059290:intron | 35.0% |
| ! | GTGATTTGTGTGGTCAAAAT+GGG | + | chr7_2:45252170-45252189 | Msa1059290:intron | 35.0% |
| ! | ATGGAGTTGACTTAACCAAA+AGG | + | chr7_2:45252239-45252258 | Msa1059290:intron | 35.0% |
| !! | GAAACTTTTTCTTCCCCTAT+AGG | + | chr7_2:45253150-45253169 | Msa1059290:intron | 35.0% |
| AACGAGTACTTAGACCTATA+GGG | - | chr7_2:45253167-45253186 | None:intergenic | 35.0% | |
| ! | TACTCGTTCACTGCTTTAAA+GGG | + | chr7_2:45253179-45253198 | Msa1059290:five_prime_UTR | 35.0% |
| ! | ATCATCATGCTTTGGTGATT+CGG | + | chr7_2:45253225-45253244 | Msa1059290:five_prime_UTR | 35.0% |
| !!! | AATCGTTTTTTTGCCTTTGC+AGG | + | chr7_2:45253374-45253393 | Msa1059290:intron | 35.0% |
| GTTAGATTCTCACAGTATAG+AGG | - | chr7_2:45253425-45253444 | None:intergenic | 35.0% | |
| CTATACTGTGAGAATCTAAC+TGG | + | chr7_2:45253425-45253444 | Msa1059290:CDS | 35.0% | |
| !! | CTGGTTCTGAAAATTTGTCT+TGG | + | chr7_2:45253444-45253463 | Msa1059290:CDS | 35.0% |
| ATCTTATTCCTACACTGTCT+GGG | - | chr7_2:45253520-45253539 | None:intergenic | 35.0% | |
| ! | GTCTCACATTTGATGACATA+TGG | + | chr7_2:45253695-45253714 | Msa1059290:intron | 35.0% |
| CCTTACAAAACCAACTTGAA+AGG | - | chr7_2:45253758-45253777 | None:intergenic | 35.0% | |
| !!! | CCTTTCAAGTTGGTTTTGTA+AGG | + | chr7_2:45253755-45253774 | Msa1059290:intron | 35.0% |
| AGTAGCTATCCAAGATTAGT+CGG | + | chr7_2:45253781-45253800 | Msa1059290:intron | 35.0% | |
| ! | TATCTAAAGCGTAACTTGAG+TGG | - | chr7_2:45253823-45253842 | None:intergenic | 35.0% |
| GATCATATCTCATCAAGTGA+GGG | - | chr7_2:45253878-45253897 | None:intergenic | 35.0% | |
| AGATCATATCTCATCAAGTG+AGG | - | chr7_2:45253879-45253898 | None:intergenic | 35.0% | |
| CTGAAAACGAGTTTGTAAGT+TGG | + | chr7_2:45253897-45253916 | Msa1059290:intron | 35.0% | |
| CTAACTCAACCCTACAAAAT+CGG | - | chr7_2:45253944-45253963 | None:intergenic | 35.0% | |
| TTCGGCATTCTAATAGGAAA+AGG | + | chr7_2:45254309-45254328 | Msa1059290:intron | 35.0% | |
| ! | TTTTGCTTGTCTTCTTCAAC+TGG | + | chr7_2:45254383-45254402 | Msa1059290:intron | 35.0% |
| TAAACCAATTGAACCATGAC+CGG | + | chr7_2:45254451-45254470 | Msa1059290:intron | 35.0% | |
| !!! | CTTTTTTGGTATTGCATCGT+CGG | - | chr7_2:45254554-45254573 | None:intergenic | 35.0% |
| TGTTGTAAATCAAAGCAGTG+AGG | - | chr7_2:45254620-45254639 | None:intergenic | 35.0% | |
| ATCAATATATCAATCCCACC+CGG | - | chr7_2:45254668-45254687 | None:intergenic | 35.0% | |
| ATTCTGATTCTGATCACATC+TGG | - | chr7_2:45254745-45254764 | None:intergenic | 35.0% | |
| AATGTATGAAGTTATGCCCT+TGG | + | chr7_2:45254785-45254804 | Msa1059290:intron | 35.0% | |
| AAATAATAGATCGACGCCAA+GGG | - | chr7_2:45254804-45254823 | None:intergenic | 35.0% | |
| TAAATAATAGATCGACGCCA+AGG | - | chr7_2:45254805-45254824 | None:intergenic | 35.0% | |
| CCAGAAATATTTGATGAACC+TGG | - | chr7_2:45254906-45254925 | None:intergenic | 35.0% | |
| CCAGGTTCATCAAATATTTC+TGG | + | chr7_2:45254903-45254922 | Msa1059290:CDS | 35.0% | |
| CCAATGATATCATCGAAGTT+AGG | - | chr7_2:45255266-45255285 | None:intergenic | 35.0% | |
| CCTAACTTCGATGATATCAT+TGG | + | chr7_2:45255263-45255282 | Msa1059290:intron | 35.0% | |
| ATTATCAAAAGCGAAGCTGT+TGG | - | chr7_2:45255664-45255683 | None:intergenic | 35.0% | |
| !! | AGCTTCGCTTTTGATAATCA+CGG | + | chr7_2:45255666-45255685 | Msa1059290:intron | 35.0% |
| GTAGGTAACTTGACATTGAA+AGG | - | chr7_2:45255706-45255725 | None:intergenic | 35.0% | |
| ! | TCTTCTGGAAGATCGAAATT+GGG | - | chr7_2:45256102-45256121 | None:intergenic | 35.0% |
| ! | TTCTTCTGGAAGATCGAAAT+TGG | - | chr7_2:45256103-45256122 | None:intergenic | 35.0% |
| ! | AAACTCTCTAAGAAAGCATG+TGG | - | chr7_2:45256222-45256241 | None:intergenic | 35.0% |
| ! | TTCAGTTATATTTGAGACGC+GGG | - | chr7_2:45256271-45256290 | None:intergenic | 35.0% |
| ! | AAAGAGTGTACATCTCAAGT+TGG | + | chr7_2:45256642-45256661 | Msa1059290:three_prime_UTR | 35.0% |
| ! | AGGGTACCTGAAAAAGGATA+AGG | - | chr7_2:45251861-45251880 | None:intergenic | 40.0% |
| !! | GGTAAAAGGGTACCTGAAAA+AGG | - | chr7_2:45251867-45251886 | None:intergenic | 40.0% |
| AGTCAACAAGCCATTGTTGT+TGG | - | chr7_2:45251888-45251907 | None:intergenic | 40.0% | |
| ! | TTACCCTTTTCCAAGAAAGG+TGG | + | chr7_2:45252209-45252228 | Msa1059290:intron | 40.0% |
| CTACCACCTTTCTTGGAAAA+GGG | - | chr7_2:45252215-45252234 | None:intergenic | 40.0% | |
| CATAAACCTACCACCTTTCT+TGG | - | chr7_2:45252222-45252241 | None:intergenic | 40.0% | |
| CAAGAAAGGTGGTAGGTTTA+TGG | + | chr7_2:45252220-45252239 | Msa1059290:intron | 40.0% | |
| AACCAAAAGGAGAAAGACTC+TGG | + | chr7_2:45252252-45252271 | Msa1059290:intron | 40.0% | |
| ! | AACCAGAGTCTTTCTCCTTT+TGG | - | chr7_2:45252257-45252276 | None:intergenic | 40.0% |
| !! | ATGGATGATTTTGACCATGG+TGG | + | chr7_2:45252561-45252580 | Msa1059290:intron | 40.0% |
| TGTGATGCTTAAAACCACCA+TGG | - | chr7_2:45252578-45252597 | None:intergenic | 40.0% | |
| AGCATCACAAAAGTCAAAGC+AGG | + | chr7_2:45252589-45252608 | Msa1059290:intron | 40.0% | |
| TGCTCTTTCAAATGCACGTT+TGG | + | chr7_2:45253064-45253083 | Msa1059290:intron | 40.0% | |
| ACGAGTACTTAGACCTATAG+GGG | - | chr7_2:45253166-45253185 | None:intergenic | 40.0% | |
| GAACGAGTACTTAGACCTAT+AGG | - | chr7_2:45253168-45253187 | None:intergenic | 40.0% | |
| GTACTCGTTCACTGCTTTAA+AGG | + | chr7_2:45253178-45253197 | Msa1059290:five_prime_UTR | 40.0% | |
| !! | CACTGCTTTAAAGGGAAAGA+CGG | + | chr7_2:45253187-45253206 | Msa1059290:five_prime_UTR | 40.0% |
| ! | CTTTAAAGGGAAAGACGGTA+TGG | + | chr7_2:45253192-45253211 | Msa1059290:five_prime_UTR | 40.0% |
| !! | TGGTGATTCGGTAAAAAGAC+TGG | + | chr7_2:45253237-45253256 | Msa1059290:five_prime_UTR | 40.0% |
| TAGAGGAAGAGGATTGACAA+AGG | - | chr7_2:45253408-45253427 | None:intergenic | 40.0% | |
| TTCTCACAGTATAGAGGAAG+AGG | - | chr7_2:45253419-45253438 | None:intergenic | 40.0% | |
| ATGCTAAACCCAAGAGTGAA+CGG | + | chr7_2:45253468-45253487 | Msa1059290:CDS | 40.0% | |
| ! | CTTGCATCATCTGAAAGCAT+AGG | - | chr7_2:45253494-45253513 | None:intergenic | 40.0% |
| GATCTTATTCCTACACTGTC+TGG | - | chr7_2:45253521-45253540 | None:intergenic | 40.0% | |
| ! | AAAATGAGTTTAGAACCGGG+AGG | + | chr7_2:45253723-45253742 | Msa1059290:intron | 40.0% |
| AAAACCAACTTGAAAGGCGA+GGG | - | chr7_2:45253752-45253771 | None:intergenic | 40.0% | |
| !! | ATCTTAGAGGCCGATTTTGT+AGG | + | chr7_2:45253931-45253950 | Msa1059290:intron | 40.0% |
| !! | TCTTAGAGGCCGATTTTGTA+GGG | + | chr7_2:45253932-45253951 | Msa1059290:intron | 40.0% |
| ! | CGATTTTGTAGGGTTGAGTT+AGG | + | chr7_2:45253942-45253961 | Msa1059290:intron | 40.0% |
| TTACTATCGCCTCTTCAGAA+TGG | + | chr7_2:45254164-45254183 | Msa1059290:intron | 40.0% | |
| ! | TGAGCATATCCATTCTGAAG+AGG | - | chr7_2:45254176-45254195 | None:intergenic | 40.0% |
| ! | TGGTTTAATCGGTTCAACCA+TGG | - | chr7_2:45254438-45254457 | None:intergenic | 40.0% |
| AACCAGACTGAAAACTGAAC+TGG | - | chr7_2:45254486-45254505 | None:intergenic | 40.0% | |
| ! | ACAATGAAGCCTTATCACAC+CGG | + | chr7_2:45254646-45254665 | Msa1059290:intron | 40.0% |
| CTTCTTGCACAACAGTATTC+TGG | - | chr7_2:45254881-45254900 | None:intergenic | 40.0% | |
| TGGTTGAATAAGCAGCTCTT+TGG | - | chr7_2:45254940-45254959 | None:intergenic | 40.0% | |
| GTAAACAACTAACCAAGGGT+TGG | - | chr7_2:45254960-45254979 | None:intergenic | 40.0% | |
| GACAAGAAACAGATTCACCT+AGG | + | chr7_2:45255567-45255586 | Msa1059290:CDS | 40.0% | |
| AAGCTGCTCACTTATATGAC+AGG | + | chr7_2:45255610-45255629 | Msa1059290:CDS | 40.0% | |
| ATACCACTGAGTTCAATCGT+CGG | - | chr7_2:45255734-45255753 | None:intergenic | 40.0% | |
| TTGAACTCAGTGGTATGAGT+TGG | + | chr7_2:45255738-45255757 | Msa1059290:intron | 40.0% | |
| TGAACTCAGTGGTATGAGTT+GGG | + | chr7_2:45255739-45255758 | Msa1059290:intron | 40.0% | |
| TGTACTAAGACGAAGGTTCA+GGG | + | chr7_2:45255774-45255793 | Msa1059290:intron | 40.0% | |
| AGGAACTGCGCAAATTCAAA+TGG | + | chr7_2:45256130-45256149 | Msa1059290:CDS | 40.0% | |
| GGAACTGCGCAAATTCAAAT+GGG | + | chr7_2:45256131-45256150 | Msa1059290:CDS | 40.0% | |
| ATCCCTTGCACAAAGATGAT+TGG | + | chr7_2:45256419-45256438 | Msa1059290:CDS | 40.0% | |
| TCCCTTGCACAAAGATGATT+GGG | + | chr7_2:45256420-45256439 | Msa1059290:CDS | 40.0% | |
| TCCCAATCATCTTTGTGCAA+GGG | - | chr7_2:45256424-45256443 | None:intergenic | 40.0% | |
| TTCCCAATCATCTTTGTGCA+AGG | - | chr7_2:45256425-45256444 | None:intergenic | 40.0% | |
| ! | GATGATTGGGAAAGTATGCA+AGG | + | chr7_2:45256433-45256452 | Msa1059290:CDS | 40.0% |
| TGCTTATGAAGATGCAGATC+AGG | + | chr7_2:45256471-45256490 | Msa1059290:CDS | 40.0% | |
| ! | TTAATGGATCTAGCATGAGG+TGG | - | chr7_2:45256531-45256550 | None:intergenic | 40.0% |
| GTTGGACATTGTCAACTTTC+AGG | + | chr7_2:45256660-45256679 | Msa1059290:three_prime_UTR | 40.0% | |
| !! | GAAAAAGAAGGGTGGTGGAA+TGG | - | chr7_2:45251577-45251596 | None:intergenic | 45.0% |
| CATCCTATGAAGCACACACT+CGG | - | chr7_2:45252011-45252030 | None:intergenic | 45.0% | |
| GTTGACTGATGCTCAAGTCT+TGG | + | chr7_2:45252076-45252095 | Msa1059290:intron | 45.0% | |
| CCTACCACCTTTCTTGGAAA+AGG | - | chr7_2:45252216-45252235 | None:intergenic | 45.0% | |
| ! | CCTTTTCCAAGAAAGGTGGT+AGG | + | chr7_2:45252213-45252232 | Msa1059290:intron | 45.0% |
| GACTATGCTCAGGTACACAT+CGG | + | chr7_2:45253299-45253318 | Msa1059290:intron | 45.0% | |
| AAAGGAACTGCTTCCTGCAA+AGG | - | chr7_2:45253390-45253409 | None:intergenic | 45.0% | |
| CAAAACCAACTTGAAAGGCG+AGG | - | chr7_2:45253753-45253772 | None:intergenic | 45.0% | |
| AACTTGAGTGGTCCGATAGT+GGG | - | chr7_2:45253811-45253830 | None:intergenic | 45.0% | |
| TAACTTGAGTGGTCCGATAG+TGG | - | chr7_2:45253812-45253831 | None:intergenic | 45.0% | |
| CTTAACACGCTCTTGTGTCT+AGG | - | chr7_2:45253852-45253871 | None:intergenic | 45.0% | |
| GGATGCATCACTGATCTTAG+AGG | + | chr7_2:45253918-45253937 | Msa1059290:intron | 45.0% | |
| TCTTTCATCCGGTTCAACCA+TGG | + | chr7_2:45254418-45254437 | Msa1059290:intron | 45.0% | |
| ! | CACCAGTTCAGTTTTCAGTC+TGG | + | chr7_2:45254481-45254500 | Msa1059290:intron | 45.0% |
| GTATTGCATCGTCGGTAACA+AGG | - | chr7_2:45254546-45254565 | None:intergenic | 45.0% | |
| GTGATAAGGCTTCATTGTGG+TGG | - | chr7_2:45254644-45254663 | None:intergenic | 45.0% | |
| GGTGTGATAAGGCTTCATTG+TGG | - | chr7_2:45254647-45254666 | None:intergenic | 45.0% | |
| ! | CAATGAAGCCTTATCACACC+GGG | + | chr7_2:45254647-45254666 | Msa1059290:intron | 45.0% |
| ACTGTTGTGCAAGAAGAACC+AGG | + | chr7_2:45254885-45254904 | Msa1059290:CDS | 45.0% | |
| CTGCTTATTCAACCAACCCT+TGG | + | chr7_2:45254945-45254964 | Msa1059290:CDS | 45.0% | |
| TCAAACGTAGGAAGCGACAT+AGG | + | chr7_2:45255463-45255482 | Msa1059290:CDS | 45.0% | |
| AGTCAAGAAGTCAGCATGAG+AGG | + | chr7_2:45255501-45255520 | Msa1059290:CDS | 45.0% | |
| ! | CAGATTCACCTAGGTACTGT+TGG | + | chr7_2:45255576-45255595 | Msa1059290:CDS | 45.0% |
| TACCACTGAGTTCAATCGTC+GGG | - | chr7_2:45255733-45255752 | None:intergenic | 45.0% | |
| ! | TATGAGTTGGGACACTGAAG+TGG | + | chr7_2:45255751-45255770 | Msa1059290:intron | 45.0% |
| GAAGTGGTGTACTAAGACGA+AGG | + | chr7_2:45255767-45255786 | Msa1059290:intron | 45.0% | |
| GTGTACTAAGACGAAGGTTC+AGG | + | chr7_2:45255773-45255792 | Msa1059290:intron | 45.0% | |
| GGTTGGCATTGTAATGCTCA+AGG | + | chr7_2:45255982-45256001 | Msa1059290:intron | 45.0% | |
| ACACATGAAAGCAGCCCTAA+AGG | - | chr7_2:45256070-45256089 | None:intergenic | 45.0% | |
| ! | TTTAGGGCTGCTTTCATGTG+TGG | + | chr7_2:45256069-45256088 | Msa1059290:intron | 45.0% |
| ! | TTAGGGCTGCTTTCATGTGT+GGG | + | chr7_2:45256070-45256089 | Msa1059290:intron | 45.0% |
| TCTTCCAGAAGAAGAGAAGC+AGG | + | chr7_2:45256110-45256129 | Msa1059290:CDS | 45.0% | |
| AGTTCCTGCTTCTCTTCTTC+TGG | - | chr7_2:45256117-45256136 | None:intergenic | 45.0% | |
| !! | AGACGCGGGTGTTTTATTGT+CGG | - | chr7_2:45256257-45256276 | None:intergenic | 45.0% |
| ! | GAAAGTATGCAAGGAGTGAG+TGG | + | chr7_2:45256442-45256461 | Msa1059290:CDS | 45.0% |
| !! | AGAAGGGTGGTGGAATGGAA+GGG | - | chr7_2:45251572-45251591 | None:intergenic | 50.0% |
| !! | AAGAAGGGTGGTGGAATGGA+AGG | - | chr7_2:45251573-45251592 | None:intergenic | 50.0% |
| ATGAAGCACACACTCGGACA+CGG | - | chr7_2:45252005-45252024 | None:intergenic | 50.0% | |
| TGTCCGAGTGTGTGCTTCAT+AGG | + | chr7_2:45252005-45252024 | Msa1059290:intron | 50.0% | |
| ! | TGGTAAGCTTAAGAAGGCGC+AGG | + | chr7_2:45253269-45253288 | Msa1059290:CDS | 50.0% |
| ! | TTAAGAAGGCGCAGGCTCTT+GGG | + | chr7_2:45253277-45253296 | Msa1059290:CDS | 50.0% |
| AGCATAGGCCGTTCACTCTT+GGG | - | chr7_2:45253479-45253498 | None:intergenic | 50.0% | |
| AAGCATAGGCCGTTCACTCT+TGG | - | chr7_2:45253480-45253499 | None:intergenic | 50.0% | |
| TTAGTCGGACCACCCACTAT+CGG | + | chr7_2:45253796-45253815 | Msa1059290:intron | 50.0% | |
| GGATATGCTCAATAGCGCCA+TGG | + | chr7_2:45254185-45254204 | Msa1059290:intron | 50.0% | |
| ATGCTCAATAGCGCCATGGT+TGG | + | chr7_2:45254189-45254208 | Msa1059290:intron | 50.0% | |
| ! | TCGACCACTTTAGCTCGCTT+CGG | + | chr7_2:45254291-45254310 | Msa1059290:intron | 50.0% |
| AATGCCGAAGCGAGCTAAAG+TGG | - | chr7_2:45254298-45254317 | None:intergenic | 50.0% | |
| GCTCGCTTCGGCATTCTAAT+AGG | + | chr7_2:45254303-45254322 | Msa1059290:intron | 50.0% | |
| CGGTTCAACCATGGTTGAAC+CGG | - | chr7_2:45254427-45254446 | None:intergenic | 50.0% | |
| CCTTCCGGTCATGGTTCAAT+TGG | - | chr7_2:45254458-45254477 | None:intergenic | 50.0% | |
| CCAATTGAACCATGACCGGA+AGG | + | chr7_2:45254455-45254474 | Msa1059290:intron | 50.0% | |
| ACTGAACTGGTGAGACCTTC+CGG | - | chr7_2:45254473-45254492 | None:intergenic | 50.0% | |
| CTTGCGATCCAACAGTACCT+AGG | - | chr7_2:45255587-45255606 | None:intergenic | 50.0% | |
| ACCACTGAGTTCAATCGTCG+GGG | - | chr7_2:45255732-45255751 | None:intergenic | 50.0% | |
| CTTCCGTTACAGATCCACGA+CGG | + | chr7_2:45255961-45255980 | Msa1059290:intron | 50.0% | |
| CAACCGTCGTGGATCTGTAA+CGG | - | chr7_2:45255967-45255986 | None:intergenic | 50.0% | |
| CATTACAATGCCAACCGTCG+TGG | - | chr7_2:45255978-45255997 | None:intergenic | 50.0% | |
| ! | CTTAAGAAGGCGCAGGCTCT+TGG | + | chr7_2:45253276-45253295 | Msa1059290:CDS | 55.0% |
| AGGCTCTTGGGACTATGCTC+AGG | + | chr7_2:45253289-45253308 | Msa1059290:CDS | 55.0% | |
| GCAAGCATCCCAGACAGTGT+AGG | + | chr7_2:45253509-45253528 | Msa1059290:CDS | 55.0% | |
| ! | GCATCCCTCGCCTTTCAAGT+TGG | + | chr7_2:45253745-45253764 | Msa1059290:intron | 55.0% |
| GTGGGTGGTCCGACTAATCT+TGG | - | chr7_2:45253793-45253812 | None:intergenic | 55.0% | |
| !! | TTGAGTGGTCCGATAGTGGG+TGG | - | chr7_2:45253808-45253827 | None:intergenic | 55.0% |
| ! | CACGCTCTTGTGTCTAGGAC+TGG | - | chr7_2:45253847-45253866 | None:intergenic | 55.0% |
| ! | TGAAGCCTTATCACACCGGG+TGG | + | chr7_2:45254650-45254669 | Msa1059290:intron | 55.0% |
| ! | GAAGCCTTATCACACCGGGT+GGG | + | chr7_2:45254651-45254670 | Msa1059290:intron | 55.0% |
| CAATCCCACCCGGTGTGATA+AGG | - | chr7_2:45254658-45254677 | None:intergenic | 55.0% | |
| CAGGACCTGCTGTCAAACGT+AGG | + | chr7_2:45255451-45255470 | Msa1059290:intron | 55.0% | |
| CGCTTCCTACGTTTGACAGC+AGG | - | chr7_2:45255459-45255478 | None:intergenic | 55.0% | |
| GTTCAATCGTCGGGGACAGT+AGG | - | chr7_2:45255724-45255743 | None:intergenic | 55.0% | |
| TCCCCGACGATTGAACTCAG+TGG | + | chr7_2:45255728-45255747 | Msa1059290:intron | 55.0% | |
| ! | CGTCGTGGATCTGTAACGGA+AGG | - | chr7_2:45255963-45255982 | None:intergenic | 55.0% |
| CGTTACAGATCCACGACGGT+TGG | + | chr7_2:45255965-45255984 | Msa1059290:intron | 55.0% | |
| !! | AGGGTGGTGGAATGGAAGGG+TGG | - | chr7_2:45251569-45251588 | None:intergenic | 60.0% |
| ACACACTCGGACACGGACAC+CGG | - | chr7_2:45251998-45252017 | None:intergenic | 60.0% | |
| CTGGTGAGACCTTCCGGTCA+TGG | - | chr7_2:45254467-45254486 | None:intergenic | 60.0% | |
| GAAAGGCGAGGGATGCCTCC+CGG | - | chr7_2:45253741-45253760 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 45251494 | 45256772 | 45251494 | ID=Msa1059290;Name=Msa1059290 |
| chr7_2 | mRNA | 45251494 | 45256772 | 45251494 | ID=Msa1059290-mRNA-1;Parent=Msa1059290;Name=Msa1059290-mRNA-1;_AED=0.25;_eAED=0.25;_QI=526|0.83|0.85|1|0.83|0.71|7|262|239 |
| chr7_2 | exon | 45251494 | 45251923 | 45251494 | ID=Msa1059290-mRNA-1:exon:8210;Parent=Msa1059290-mRNA-1 |
| chr7_2 | exon | 45253172 | 45253310 | 45253172 | ID=Msa1059290-mRNA-1:exon:8211;Parent=Msa1059290-mRNA-1 |
| chr7_2 | exon | 45253396 | 45253547 | 45253396 | ID=Msa1059290-mRNA-1:exon:8212;Parent=Msa1059290-mRNA-1 |
| chr7_2 | exon | 45254882 | 45254966 | 45254882 | ID=Msa1059290-mRNA-1:exon:8213;Parent=Msa1059290-mRNA-1 |
| chr7_2 | exon | 45255454 | 45255631 | 45255454 | ID=Msa1059290-mRNA-1:exon:8214;Parent=Msa1059290-mRNA-1 |
| chr7_2 | exon | 45256074 | 45256195 | 45256074 | ID=Msa1059290-mRNA-1:exon:8215;Parent=Msa1059290-mRNA-1 |
| chr7_2 | exon | 45256371 | 45256772 | 45256371 | ID=Msa1059290-mRNA-1:exon:8216;Parent=Msa1059290-mRNA-1 |
| chr7_2 | five_prime_UTR | 45251494 | 45251923 | 45251494 | ID=Msa1059290-mRNA-1:five_prime_utr;Parent=Msa1059290-mRNA-1 |
| chr7_2 | five_prime_UTR | 45253172 | 45253267 | 45253172 | ID=Msa1059290-mRNA-1:five_prime_utr;Parent=Msa1059290-mRNA-1 |
| chr7_2 | CDS | 45253268 | 45253310 | 45253268 | ID=Msa1059290-mRNA-1:cds;Parent=Msa1059290-mRNA-1 |
| chr7_2 | CDS | 45253396 | 45253547 | 45253396 | ID=Msa1059290-mRNA-1:cds;Parent=Msa1059290-mRNA-1 |
| chr7_2 | CDS | 45254882 | 45254966 | 45254882 | ID=Msa1059290-mRNA-1:cds;Parent=Msa1059290-mRNA-1 |
| chr7_2 | CDS | 45255454 | 45255631 | 45255454 | ID=Msa1059290-mRNA-1:cds;Parent=Msa1059290-mRNA-1 |
| chr7_2 | CDS | 45256074 | 45256195 | 45256074 | ID=Msa1059290-mRNA-1:cds;Parent=Msa1059290-mRNA-1 |
| chr7_2 | CDS | 45256371 | 45256510 | 45256371 | ID=Msa1059290-mRNA-1:cds;Parent=Msa1059290-mRNA-1 |
| chr7_2 | three_prime_UTR | 45256511 | 45256772 | 45256511 | ID=Msa1059290-mRNA-1:three_prime_utr;Parent=Msa1059290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
