Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150570 | XP_003625265.1 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 785 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150570 | sp|P46258|ACT3_PEA | 98.939 | 377 | 4 | 0 | 1 | 377 | 1 | 377 | 0.0 | 776 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150570 | G7KVE1 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 785 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0590640 | Msa1150570 | 0.803156 | 3.988248e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150570 | MtrunA17_Chr7g0258721 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 785 |
| Msa1150570 | MtrunA17_Chr1g0175391 | 96.817 | 377 | 12 | 0 | 1 | 377 | 1 | 377 | 0.0 | 769 |
| Msa1150570 | MtrunA17_Chr2g0328091 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 765 |
| Msa1150570 | MtrunA17_Chr6g0448881 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
| Msa1150570 | MtrunA17_Chr3g0129641 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| Msa1150570 | MtrunA17_Chr7g0223901 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| Msa1150570 | MtrunA17_Chr2g0278591 | 92.838 | 377 | 27 | 0 | 1 | 377 | 1 | 377 | 0.0 | 744 |
| Msa1150570 | MtrunA17_Chr7g0224401 | 43.799 | 379 | 199 | 3 | 10 | 374 | 7 | 385 | 1.58e-120 | 354 |
| Msa1150570 | MtrunA17_Chr5g0427591 | 36.996 | 446 | 208 | 11 | 1 | 376 | 1 | 443 | 3.95e-92 | 283 |
| Msa1150570 | MtrunA17_Chr8g0361001 | 36.996 | 446 | 208 | 11 | 1 | 376 | 1 | 443 | 5.58e-92 | 283 |
| Msa1150570 | MtrunA17_Chr8g0381261 | 34.845 | 419 | 207 | 10 | 10 | 372 | 10 | 418 | 7.50e-72 | 230 |
| Msa1150570 | MtrunA17_Chr3g0089031 | 37.766 | 376 | 208 | 9 | 11 | 377 | 5 | 363 | 1.94e-68 | 219 |
| Msa1150570 | MtrunA17_Chr2g0305361 | 27.854 | 438 | 250 | 7 | 4 | 377 | 2 | 437 | 2.74e-57 | 192 |
| Msa1150570 | MtrunA17_Chr3g0080021 | 30.303 | 297 | 183 | 9 | 91 | 371 | 179 | 467 | 1.14e-39 | 146 |
| Msa1150570 | MtrunA17_Chr8g0369101 | 31.058 | 293 | 175 | 10 | 91 | 366 | 187 | 469 | 1.87e-35 | 135 |
| Msa1150570 | MtrunA17_Chr3g0111971 | 29.762 | 252 | 158 | 7 | 9 | 245 | 21 | 268 | 2.77e-23 | 101 |
| Msa1150570 | MtrunA17_Chr3g0111971 | 34.426 | 122 | 77 | 2 | 250 | 368 | 586 | 707 | 6.54e-16 | 79.3 |
| Msa1150570 | MtrunA17_Chr8g0336071 | 40.000 | 95 | 57 | 0 | 105 | 199 | 1 | 95 | 3.56e-19 | 81.6 |
| Msa1150570 | MtrunA17_Chr8g0336061 | 42.391 | 92 | 40 | 2 | 241 | 319 | 12 | 103 | 2.41e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150570 | AT5G09810.1 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| Msa1150570 | AT3G12110.1 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 760 |
| Msa1150570 | AT3G46520.2 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 759 |
| Msa1150570 | AT3G46520.1 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 759 |
| Msa1150570 | AT3G53750.1 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 759 |
| Msa1150570 | AT3G53750.2 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 759 |
| Msa1150570 | AT2G37620.1 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 759 |
| Msa1150570 | AT2G37620.3 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 759 |
| Msa1150570 | AT2G37620.2 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 759 |
| Msa1150570 | AT2G37620.4 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 759 |
| Msa1150570 | AT5G59370.2 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
| Msa1150570 | AT5G59370.1 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
| Msa1150570 | AT3G18780.2 | 90.981 | 377 | 34 | 0 | 1 | 377 | 1 | 377 | 0.0 | 737 |
| Msa1150570 | AT3G18780.3 | 90.981 | 377 | 34 | 0 | 1 | 377 | 1 | 377 | 0.0 | 737 |
| Msa1150570 | AT1G49240.1 | 90.716 | 377 | 35 | 0 | 1 | 377 | 1 | 377 | 0.0 | 735 |
| Msa1150570 | AT3G18780.1 | 90.808 | 359 | 33 | 0 | 1 | 359 | 1 | 359 | 0.0 | 696 |
| Msa1150570 | AT2G42100.1 | 85.326 | 368 | 54 | 0 | 10 | 377 | 11 | 378 | 0.0 | 677 |
| Msa1150570 | AT2G42090.1 | 71.351 | 370 | 101 | 1 | 7 | 376 | 1 | 365 | 0.0 | 568 |
| Msa1150570 | AT2G42170.1 | 78.313 | 332 | 69 | 1 | 46 | 377 | 1 | 329 | 0.0 | 560 |
| Msa1150570 | AT2G42170.3 | 78.313 | 332 | 69 | 1 | 46 | 377 | 1 | 329 | 0.0 | 560 |
| Msa1150570 | AT2G42170.4 | 78.205 | 312 | 65 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
| Msa1150570 | AT2G42170.2 | 78.205 | 312 | 65 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
| Msa1150570 | AT2G42170.5 | 78.761 | 226 | 45 | 1 | 152 | 377 | 9 | 231 | 6.01e-132 | 377 |
| Msa1150570 | AT3G27000.1 | 44.591 | 379 | 196 | 4 | 10 | 374 | 7 | 385 | 2.71e-122 | 358 |
| Msa1150570 | AT1G18450.1 | 36.569 | 443 | 211 | 9 | 1 | 376 | 1 | 440 | 8.26e-94 | 288 |
| Msa1150570 | AT1G13180.1 | 34.615 | 416 | 212 | 11 | 10 | 372 | 9 | 417 | 7.23e-72 | 231 |
| Msa1150570 | AT3G60830.1 | 37.731 | 379 | 212 | 9 | 7 | 377 | 1 | 363 | 1.23e-67 | 218 |
| Msa1150570 | AT3G33520.1 | 30.166 | 421 | 236 | 7 | 10 | 377 | 5 | 420 | 7.18e-59 | 197 |
| Msa1150570 | AT5G56180.3 | 30.986 | 284 | 171 | 9 | 91 | 358 | 50 | 324 | 2.26e-34 | 130 |
| Msa1150570 | AT5G56180.1 | 30.986 | 284 | 171 | 9 | 91 | 358 | 182 | 456 | 1.23e-33 | 130 |
| Msa1150570 | AT3G12380.2 | 31.395 | 258 | 152 | 9 | 9 | 245 | 21 | 274 | 8.39e-26 | 109 |
| Msa1150570 | AT3G12380.2 | 33.103 | 145 | 93 | 2 | 228 | 368 | 572 | 716 | 3.24e-16 | 80.9 |
| Msa1150570 | AT3G12380.1 | 31.250 | 256 | 149 | 9 | 9 | 245 | 21 | 268 | 3.73e-25 | 107 |
| Msa1150570 | AT3G12380.1 | 33.103 | 145 | 93 | 2 | 228 | 368 | 566 | 710 | 3.26e-16 | 80.9 |
| Msa1150570 | AT1G73910.1 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.61e-23 | 95.1 |
| Msa1150570 | AT1G73910.2 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.61e-23 | 95.1 |
| Msa1150570 | AT5G56180.2 | 32.292 | 192 | 110 | 7 | 91 | 271 | 182 | 364 | 8.89e-19 | 87.4 |
| Msa1150570 | AT1G73910.3 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 3.26e-12 | 64.7 |
Find 125 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGGTATTGTTCTGGATTC+TGG | 0.149133 | 7_4:+34122977 | Msa1150570:intron |
| AGCATGGGATTGTTAGTAAT+TGG | 0.164954 | 7_4:+34122400 | Msa1150570:CDS |
| CTGGATTGGAGGTTCCATTT+TGG | 0.195803 | 7_4:+34123549 | Msa1150570:CDS |
| TGTTAGTAATTGGGATGATA+TGG | 0.286824 | 7_4:+34122410 | Msa1150570:CDS |
| AGAAGAACAGGGTGTTCTTC+AGG | 0.300324 | 7_4:-34122477 | None:intergenic |
| GATGGCTGGAACAAAACTTC+TGG | 0.305788 | 7_4:-34123304 | None:intergenic |
| GAGGGATATGAAGGAGAAAT+TGG | 0.306130 | 7_4:+34123159 | Msa1150570:CDS |
| CATTTCCTGTGTACTATTGA+TGG | 0.320989 | 7_4:-34123804 | None:intergenic |
| TCCCCATGCAATCCTTCGTT+TGG | 0.323983 | 7_4:+34123045 | Msa1150570:CDS |
| ATCCTTCGTTTGGATCTTGC+AGG | 0.332165 | 7_4:+34123055 | Msa1150570:CDS |
| CTAACAATCCCATGCTCAAT+TGG | 0.332451 | 7_4:-34122393 | None:intergenic |
| TTGTTCCAGCCATCCATGAT+AGG | 0.341621 | 7_4:+34123313 | Msa1150570:CDS |
| GGTGCTTCAGTGAGAAGAAC+AGG | 0.346523 | 7_4:-34122489 | None:intergenic |
| AGTGCATATCCCTCGTAAAT+AGG | 0.354141 | 7_4:-34123022 | None:intergenic |
| GGTGCATGAGAGCTGGATTA+AGG | 0.354953 | 7_4:+34123845 | Msa1150570:three_prime_UTR |
| GGTGGTTCTACAATGTTTCC+TGG | 0.367242 | 7_4:+34123433 | Msa1150570:CDS |
| AAGGCAGAATATGATGAATC+TGG | 0.369605 | 7_4:+34123780 | Msa1150570:CDS |
| TAGGTATTGTTCTGGATTCT+GGG | 0.386484 | 7_4:+34122978 | Msa1150570:intron |
| CAAAGAAATGGTAAAAGAAT+AGG | 0.395590 | 7_4:-34123930 | None:intergenic |
| AGTGCTGAGGGATGCCAAAA+TGG | 0.398050 | 7_4:-34123563 | None:intergenic |
| GATGTGTATTGTTACTGATT+TGG | 0.407826 | 7_4:+34124053 | Msa1150570:three_prime_UTR |
| CGATTAGCCTTAGGATTAAG+AGG | 0.422207 | 7_4:-34122510 | None:intergenic |
| ATAATTTATGTTTATCAAGT+TGG | 0.424435 | 7_4:-34124229 | None:intergenic |
| GGTTCCATTGTCGCAAACTA+AGG | 0.428219 | 7_4:-34121996 | None:intergenic |
| TGAAGTGTGATGTCGACATT+AGG | 0.428549 | 7_4:+34123380 | Msa1150570:CDS |
| ATCCCTCAGCACTTTCCAAC+AGG | 0.435296 | 7_4:+34123573 | Msa1150570:CDS |
| TATGCGAGTGGTCGTACAAC+TGG | 0.440352 | 7_4:+34122612 | Msa1150570:CDS |
| AATGGTAAAAGAATAGGAAA+TGG | 0.440968 | 7_4:-34123924 | None:intergenic |
| GCAGTATTCCCTAGCATAGT+AGG | 0.445310 | 7_4:+34122270 | Msa1150570:CDS |
| GCATGGGATTGTTAGTAATT+GGG | 0.447989 | 7_4:+34122401 | Msa1150570:CDS |
| ATTGTGATCACCTGCCCATC+AGG | 0.453493 | 7_4:-34123259 | None:intergenic |
| TGTTTCCTGGTATTGCTGAT+AGG | 0.455278 | 7_4:+34123446 | Msa1150570:CDS |
| GACATTAGGAAAGATCTCTA+TGG | 0.455677 | 7_4:+34123394 | Msa1150570:CDS |
| AAGAAACGTGATCAAAGAAA+TGG | 0.464458 | 7_4:-34123942 | None:intergenic |
| TTAGTTTGCGACAATGGAAC+CGG | 0.465515 | 7_4:+34121998 | Msa1150570:CDS |
| GATATTCCAAACCGACGGTC+AGG | 0.466965 | 7_4:+34121774 | None:intergenic |
| CAGAGAGGAAGTACAGTGTC+TGG | 0.471867 | 7_4:+34123530 | Msa1150570:CDS |
| ATGGCTGGAACAAAACTTCT+GGG | 0.473579 | 7_4:-34123303 | None:intergenic |
| AAGTTCCTCAACCAACTAGA+TGG | 0.474313 | 7_4:-34123901 | None:intergenic |
| CACATCTCTACAACAAAATG+AGG | 0.474871 | 7_4:-34124036 | None:intergenic |
| TATTGCTCTTGATTATGAGC+AGG | 0.475672 | 7_4:+34123186 | Msa1150570:CDS |
| AGGAGATTCCATCCCTATCA+TGG | 0.480685 | 7_4:-34123326 | None:intergenic |
| GGGATGATATGGAGAAGATC+TGG | 0.484705 | 7_4:+34122421 | Msa1150570:CDS |
| AGGAAGTACAGTGTCTGGAT+TGG | 0.485496 | 7_4:+34123535 | Msa1150570:CDS |
| AAGTGTTCTGGTTGTCATAG+TGG | 0.490770 | 7_4:+34124104 | Msa1150570:three_prime_UTR |
| CAGCCCTTAGTTTGCGACAA+TGG | 0.490957 | 7_4:+34121992 | Msa1150570:CDS |
| ATTGTTCTGGATTCTGGGGA+TGG | 0.491654 | 7_4:+34122983 | Msa1150570:CDS |
| CAGACACTGTACTTCCTCTC+TGG | 0.493244 | 7_4:-34123529 | None:intergenic |
| AAATCACGGTGCATGAGAGC+TGG | 0.493439 | 7_4:+34123838 | Msa1150570:three_prime_UTR |
| CACAGGGGTAATGGTTGGAA+TGG | 0.495803 | 7_4:+34122305 | Msa1150570:CDS |
| AATTTCTCGCTCTGCTGAAG+TGG | 0.496387 | 7_4:-34123134 | None:intergenic |
| TAACAATCCCATGCTCAATT+GGG | 0.497649 | 7_4:-34122392 | None:intergenic |
| CTGCCCATCAGGTAGCTCAT+AGG | 0.497821 | 7_4:-34123248 | None:intergenic |
| AGAAATTGTGAGGGATATGA+AGG | 0.501249 | 7_4:+34123150 | Msa1150570:CDS |
| AAGTACAGTGTCTGGATTGG+AGG | 0.501277 | 7_4:+34123538 | Msa1150570:CDS |
| GATCCAAACGAAGGATTGCA+TGG | 0.503842 | 7_4:-34123048 | None:intergenic |
| TCCACGTCACACAGGGGTAA+TGG | 0.512712 | 7_4:+34122296 | Msa1150570:CDS |
| CGTGGACGTCCTACTATGCT+AGG | 0.514609 | 7_4:-34122279 | None:intergenic |
| TGTTCCAGCCATCCATGATA+GGG | 0.514648 | 7_4:+34123314 | Msa1150570:CDS |
| ACAGGGGTAATGGTTGGAAT+GGG | 0.516861 | 7_4:+34122306 | Msa1150570:CDS |
| TTGAAATACCCAATTGAGCA+TGG | 0.529351 | 7_4:+34122384 | Msa1150570:CDS |
| TTATCCCAACATATCAAGAA+AGG | 0.530626 | 7_4:-34123973 | None:intergenic |
| CTATGAGCTACCTGATGGGC+AGG | 0.530662 | 7_4:+34123249 | Msa1150570:CDS |
| GATGGGCAGGTGATCACAAT+CGG | 0.534348 | 7_4:+34123262 | Msa1150570:CDS |
| CCATCCCTATCATGGATGGC+TGG | 0.535688 | 7_4:-34123318 | None:intergenic |
| AATGTTGTCTCGTGGATACC+AGG | 0.544087 | 7_4:-34123346 | None:intergenic |
| CAATGGAACCGGCATGGTCA+AGG | 0.545728 | 7_4:+34122009 | Msa1150570:CDS |
| TGCAGGAGATGATGCACCAA+GGG | 0.547290 | 7_4:+34122248 | Msa1150570:CDS |
| CTCATCCTATCAGCAATACC+AGG | 0.549889 | 7_4:-34123451 | None:intergenic |
| GAGCAAGGAGATTACAGCAT+TGG | 0.550032 | 7_4:+34123471 | Msa1150570:CDS |
| TCTTGATTATGAGCAGGAGT+TGG | 0.557428 | 7_4:+34123192 | Msa1150570:CDS |
| TGAATAGCAACATACATAGC+AGG | 0.559953 | 7_4:-34122573 | None:intergenic |
| GTGCTTTCGCTTTATGCGAG+TGG | 0.560364 | 7_4:+34122600 | Msa1150570:CDS |
| GGAACAAAACTTCTGGGCAT+CGG | 0.561285 | 7_4:-34123297 | None:intergenic |
| AGGCAGAATATGATGAATCT+GGG | 0.564408 | 7_4:+34123781 | Msa1150570:CDS |
| TGAAGCACCTCTTAATCCTA+AGG | 0.566737 | 7_4:+34122503 | Msa1150570:CDS |
| ATCCAAACGAAGGATTGCAT+GGG | 0.568962 | 7_4:-34123047 | None:intergenic |
| AAATACCATCTAGTTGGTTG+AGG | 0.571614 | 7_4:+34123896 | Msa1150570:three_prime_UTR |
| ACCTAGTAGCATGAAAATCA+AGG | 0.573048 | 7_4:+34123495 | Msa1150570:CDS |
| CAAGTTGGCTTATGAAACGT+AGG | 0.573175 | 7_4:-34124214 | None:intergenic |
| GGTGAAAGTGTAACCACGCT+CGG | 0.573261 | 7_4:-34123113 | None:intergenic |
| GAAACAGACACAGATGATGA+AGG | 0.575681 | 7_4:-34121930 | None:intergenic |
| TGAAATACCCAATTGAGCAT+GGG | 0.576183 | 7_4:+34122385 | Msa1150570:CDS |
| ATGCTAGGGAATACTGCCCT+TGG | 0.578562 | 7_4:-34122264 | None:intergenic |
| ATGATAGGGATGGAATCTCC+TGG | 0.579865 | 7_4:+34123328 | Msa1150570:CDS |
| ACCATTACCCCTGTGTGACG+TGG | 0.580899 | 7_4:-34122297 | None:intergenic |
| ACATCTCTACAACAAAATGA+GGG | 0.581981 | 7_4:-34124035 | None:intergenic |
| GTTCCATTGTCGCAAACTAA+GGG | 0.583690 | 7_4:-34121995 | None:intergenic |
| CGTCACACAGGGGTAATGGT+TGG | 0.583763 | 7_4:+34122300 | Msa1150570:CDS |
| TATGGTAACATTGTGTTGAG+TGG | 0.586496 | 7_4:+34123412 | Msa1150570:CDS |
| GGTAACATTGTGTTGAGTGG+TGG | 0.592071 | 7_4:+34123415 | Msa1150570:CDS |
| TTACCTGTTGGAAAGTGCTG+AGG | 0.592935 | 7_4:-34123576 | None:intergenic |
| GATTGATACCTTGACCATGC+CGG | 0.593626 | 7_4:-34122017 | None:intergenic |
| AAGACCTATGAGCTACCTGA+TGG | 0.595691 | 7_4:+34123244 | Msa1150570:CDS |
| CTTCAACAAATCAACAACAA+TGG | 0.606654 | 7_4:+34121952 | Msa1150570:exon |
| ATGCTTCTAAGTTGAAATCA+CGG | 0.607511 | 7_4:+34123824 | Msa1150570:exon |
| TAGGACGTCCACGTCACACA+GGG | 0.610133 | 7_4:+34122289 | Msa1150570:CDS |
| GATTCCATCCCTATCATGGA+TGG | 0.610301 | 7_4:-34123322 | None:intergenic |
| CCAGCCATCCATGATAGGGA+TGG | 0.621684 | 7_4:+34123318 | Msa1150570:CDS |
| TCGAGTTAAATGTTGTCTCG+TGG | 0.622628 | 7_4:-34123354 | None:intergenic |
| CAGCAGAGCGAGAAATTGTG+AGG | 0.625485 | 7_4:+34123140 | Msa1150570:CDS |
| ACACTGTACTTCCTCTCTGG+TGG | 0.626941 | 7_4:-34123526 | None:intergenic |
| AGGTATTGTTCTGGATTCTG+GGG | 0.628541 | 7_4:+34122979 | Msa1150570:intron |
| AGACCTATGAGCTACCTGAT+GGG | 0.631032 | 7_4:+34123245 | Msa1150570:CDS |
| TGGGGATGGTGTTAGTCACA+CGG | 0.632223 | 7_4:+34122997 | Msa1150570:CDS |
| GTGGACGTCCTACTATGCTA+GGG | 0.634198 | 7_4:-34122278 | None:intergenic |
| AAGTTGGCTTATGAAACGTA+GGG | 0.635299 | 7_4:-34124213 | None:intergenic |
| TTGCGACAATGGAACCGGCA+TGG | 0.639495 | 7_4:+34122003 | Msa1150570:CDS |
| TATTGCTGATAGGATGAGCA+AGG | 0.645350 | 7_4:+34123456 | Msa1150570:CDS |
| CTGGGCCATCAATAGTACAC+AGG | 0.648814 | 7_4:+34123799 | Msa1150570:CDS |
| TACCTGTTGGAAAGTGCTGA+GGG | 0.649811 | 7_4:-34123575 | None:intergenic |
| GTAGGACGTCCACGTCACAC+AGG | 0.654094 | 7_4:+34122288 | Msa1150570:CDS |
| TTAGATTCGATCCTGACCGT+CGG | 0.658308 | 7_4:-34121785 | None:intergenic |
| GATGAAGCACAATCAAAGAG+AGG | 0.658995 | 7_4:+34122351 | Msa1150570:CDS |
| CACACGGTTCCTATTTACGA+GGG | 0.661422 | 7_4:+34123013 | Msa1150570:CDS |
| TTGCAGGAGATGATGCACCA+AGG | 0.664250 | 7_4:+34122247 | Msa1150570:CDS |
| AGCAGAGCGAGAAATTGTGA+GGG | 0.666151 | 7_4:+34123141 | Msa1150570:CDS |
| CATCTCTACAACAAAATGAG+GGG | 0.666777 | 7_4:-34124034 | None:intergenic |
| TCACACGGTTCCTATTTACG+AGG | 0.670052 | 7_4:+34123012 | Msa1150570:CDS |
| GTGCTTCAGTGAGAAGAACA+GGG | 0.670285 | 7_4:-34122488 | None:intergenic |
| TCCAAACGAAGGATTGCATG+GGG | 0.676900 | 7_4:-34123046 | None:intergenic |
| TGTGCAGATGTGGATTGCAA+AGG | 0.694315 | 7_4:+34123761 | Msa1150570:intron |
| GACCTGCAAGATCCAAACGA+AGG | 0.699076 | 7_4:-34123057 | None:intergenic |
| AGGTTGTAGCACCACCAGAG+AGG | 0.701742 | 7_4:+34123515 | Msa1150570:CDS |
| AGGACGTCCACGTCACACAG+GGG | 0.764581 | 7_4:+34122290 | Msa1150570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATCAATATAATCAT+AGG | - | chr7_4:34122124-34122143 | None:intergenic | 10.0% |
| !!! | TTATGTTTTGAAGTTATTAT+CGG | + | chr7_4:34122143-34122162 | Msa1150570:intron | 15.0% |
| !!! | TCCATTTTTTAAATTATTAC+CGG | - | chr7_4:34122770-34122789 | None:intergenic | 15.0% |
| !! | ATAATTTATGTTTATCAAGT+TGG | - | chr7_4:34124232-34124251 | None:intergenic | 15.0% |
| !! | ACCGGTAATAATTTAAAAAA+TGG | + | chr7_4:34122766-34122785 | Msa1150570:intron | 20.0% |
| !!! | TTTTGAAGTTATTATCGGTT+TGG | + | chr7_4:34122148-34122167 | Msa1150570:intron | 25.0% |
| !!! | TCATGGATTTAACTTTGTTT+TGG | + | chr7_4:34122208-34122227 | Msa1150570:intron | 25.0% |
| !!! | AACTTTGTTTTGGTTGTTTT+AGG | + | chr7_4:34122218-34122237 | Msa1150570:intron | 25.0% |
| ! | TGATTCATACAAAACTCATA+CGG | - | chr7_4:34122713-34122732 | None:intergenic | 25.0% |
| ! | GAATGATGAATATGATTTGA+AGG | + | chr7_4:34122885-34122904 | Msa1150570:intron | 25.0% |
| ! | GATAACTCAGTAATTAAATC+AGG | + | chr7_4:34123618-34123637 | Msa1150570:intron | 25.0% |
| ! | TTCATTTCAACTATAAGTAC+AGG | + | chr7_4:34123645-34123664 | Msa1150570:intron | 25.0% |
| ! | AAGTACAGGTTATAAAAAGT+AGG | + | chr7_4:34123659-34123678 | Msa1150570:intron | 25.0% |
| !! | ATAACAAATGTGTTTTACTG+AGG | + | chr7_4:34123687-34123706 | Msa1150570:intron | 25.0% |
| ! | AATGGTAAAAGAATAGGAAA+TGG | - | chr7_4:34123927-34123946 | None:intergenic | 25.0% |
| ! | CAAAGAAATGGTAAAAGAAT+AGG | - | chr7_4:34123933-34123952 | None:intergenic | 25.0% |
| !! | TTTTCCTTTCTTGATATGTT+GGG | + | chr7_4:34123969-34123988 | Msa1150570:three_prime_UTR | 25.0% |
| !!! | TCTGTTGTTTTAAAAAGGGA+AGG | - | chr7_4:34121852-34121871 | None:intergenic | 30.0% |
| CTTCAACAAATCAACAACAA+TGG | + | chr7_4:34121952-34121971 | Msa1150570:exon | 30.0% | |
| TGTTAGTAATTGGGATGATA+TGG | + | chr7_4:34122410-34122429 | Msa1150570:CDS | 30.0% | |
| GAATGTAATCACATATATCG+TGG | + | chr7_4:34122805-34122824 | Msa1150570:intron | 30.0% | |
| ! | TGATTTTCTGTGTTTTGTGT+AGG | + | chr7_4:34122959-34122978 | Msa1150570:intron | 30.0% |
| TTTCCAACAGGTAAATTTGA+TGG | + | chr7_4:34123585-34123604 | Msa1150570:intron | 30.0% | |
| AATCCATCAAATTTACCTGT+TGG | - | chr7_4:34123591-34123610 | None:intergenic | 30.0% | |
| TACAGGTTATAAAAAGTAGG+AGG | + | chr7_4:34123662-34123681 | Msa1150570:intron | 30.0% | |
| ! | ATGCTTCTAAGTTGAAATCA+CGG | + | chr7_4:34123824-34123843 | Msa1150570:exon | 30.0% |
| CTACAAAAATACCATCTAGT+TGG | + | chr7_4:34123890-34123909 | Msa1150570:three_prime_UTR | 30.0% | |
| AAGAAACGTGATCAAAGAAA+TGG | - | chr7_4:34123945-34123964 | None:intergenic | 30.0% | |
| ! | GTTTTCCTTTCTTGATATGT+TGG | + | chr7_4:34123968-34123987 | Msa1150570:three_prime_UTR | 30.0% |
| TTATCCCAACATATCAAGAA+AGG | - | chr7_4:34123976-34123995 | None:intergenic | 30.0% | |
| ACATCTCTACAACAAAATGA+GGG | - | chr7_4:34124038-34124057 | None:intergenic | 30.0% | |
| ! | GATGTGTATTGTTACTGATT+TGG | + | chr7_4:34124053-34124072 | Msa1150570:three_prime_UTR | 30.0% |
| ! | TATCTTTTCATCAAGTGTTC+TGG | + | chr7_4:34124092-34124111 | Msa1150570:three_prime_UTR | 30.0% |
| !!! | GCGCTCTGTTGTTTTAAAAA+GGG | - | chr7_4:34121856-34121875 | None:intergenic | 35.0% |
| TGAAATAGAGATACAGACAC+CGG | - | chr7_4:34122191-34122210 | None:intergenic | 35.0% | |
| GTGTCTGTATCTCTATTTCA+TGG | + | chr7_4:34122191-34122210 | Msa1150570:intron | 35.0% | |
| !!! | TTGTTTTGGTTGTTTTAGGC+TGG | + | chr7_4:34122222-34122241 | Msa1150570:intron | 35.0% |
| GGACAAAAAGATGCATATGT+TGG | + | chr7_4:34122327-34122346 | Msa1150570:CDS | 35.0% | |
| TTGAAATACCCAATTGAGCA+TGG | + | chr7_4:34122384-34122403 | Msa1150570:CDS | 35.0% | |
| TGAAATACCCAATTGAGCAT+GGG | + | chr7_4:34122385-34122404 | Msa1150570:CDS | 35.0% | |
| TAACAATCCCATGCTCAATT+GGG | - | chr7_4:34122395-34122414 | None:intergenic | 35.0% | |
| AGCATGGGATTGTTAGTAAT+TGG | + | chr7_4:34122400-34122419 | Msa1150570:CDS | 35.0% | |
| GCATGGGATTGTTAGTAATT+GGG | + | chr7_4:34122401-34122420 | Msa1150570:CDS | 35.0% | |
| !!! | ATTTTCTCACGATTAGCCTT+AGG | - | chr7_4:34122522-34122541 | None:intergenic | 35.0% |
| TGAATAGCAACATACATAGC+AGG | - | chr7_4:34122576-34122595 | None:intergenic | 35.0% | |
| CAAGATTGAAGGATAAACAC+CGG | + | chr7_4:34122748-34122767 | Msa1150570:intron | 35.0% | |
| TGTAATCACATATATCGTGG+TGG | + | chr7_4:34122808-34122827 | Msa1150570:intron | 35.0% | |
| !! | GTTTTGTGTAGGTATTGTTC+TGG | + | chr7_4:34122970-34122989 | Msa1150570:intron | 35.0% |
| ! | TAGGTATTGTTCTGGATTCT+GGG | + | chr7_4:34122978-34122997 | Msa1150570:intron | 35.0% |
| AGAAATTGTGAGGGATATGA+AGG | + | chr7_4:34123150-34123169 | Msa1150570:CDS | 35.0% | |
| TATTGCTCTTGATTATGAGC+AGG | + | chr7_4:34123186-34123205 | Msa1150570:CDS | 35.0% | |
| GACATTAGGAAAGATCTCTA+TGG | + | chr7_4:34123394-34123413 | Msa1150570:CDS | 35.0% | |
| TATGGTAACATTGTGTTGAG+TGG | + | chr7_4:34123412-34123431 | Msa1150570:CDS | 35.0% | |
| ACCTAGTAGCATGAAAATCA+AGG | + | chr7_4:34123495-34123514 | Msa1150570:CDS | 35.0% | |
| ! | ACCTTGATTTTCATGCTACT+AGG | - | chr7_4:34123499-34123518 | None:intergenic | 35.0% |
| AAGGCAGAATATGATGAATC+TGG | + | chr7_4:34123780-34123799 | Msa1150570:CDS | 35.0% | |
| AGGCAGAATATGATGAATCT+GGG | + | chr7_4:34123781-34123800 | Msa1150570:CDS | 35.0% | |
| CATTTCCTGTGTACTATTGA+TGG | - | chr7_4:34123807-34123826 | None:intergenic | 35.0% | |
| AAATACCATCTAGTTGGTTG+AGG | + | chr7_4:34123896-34123915 | Msa1150570:three_prime_UTR | 35.0% | |
| CATCTCTACAACAAAATGAG+GGG | - | chr7_4:34124037-34124056 | None:intergenic | 35.0% | |
| CACATCTCTACAACAAAATG+AGG | - | chr7_4:34124039-34124058 | None:intergenic | 35.0% | |
| ! | AAGTTGGCTTATGAAACGTA+GGG | - | chr7_4:34124216-34124235 | None:intergenic | 35.0% |
| !!! | CGCGCTCTGTTGTTTTAAAA+AGG | - | chr7_4:34121857-34121876 | None:intergenic | 40.0% |
| GAAACAGACACAGATGATGA+AGG | - | chr7_4:34121933-34121952 | None:intergenic | 40.0% | |
| GTTCCATTGTCGCAAACTAA+GGG | - | chr7_4:34121998-34122017 | None:intergenic | 40.0% | |
| !! | TTAGTTTGCGACAATGGAAC+CGG | + | chr7_4:34121998-34122017 | Msa1150570:CDS | 40.0% |
| !!! | TTGTTTTAGGCTGGTTTTGC+AGG | + | chr7_4:34122231-34122250 | Msa1150570:intron | 40.0% |
| GATGAAGCACAATCAAAGAG+AGG | + | chr7_4:34122351-34122370 | Msa1150570:CDS | 40.0% | |
| CTAACAATCCCATGCTCAAT+TGG | - | chr7_4:34122396-34122415 | None:intergenic | 40.0% | |
| ! | TGAAGCACCTCTTAATCCTA+AGG | + | chr7_4:34122503-34122522 | Msa1150570:CDS | 40.0% |
| !! | CGATTAGCCTTAGGATTAAG+AGG | - | chr7_4:34122513-34122532 | None:intergenic | 40.0% |
| CGGTGTTTATCCTTCAATCT+TGG | - | chr7_4:34122750-34122769 | None:intergenic | 40.0% | |
| ! | AGTATGTAGCATCGAAACGT+TGG | - | chr7_4:34122855-34122874 | None:intergenic | 40.0% |
| GCCATGTGATGATACAAACT+AGG | + | chr7_4:34122912-34122931 | Msa1150570:intron | 40.0% | |
| ! | GCCTAGTTTGTATCATCACA+TGG | - | chr7_4:34122916-34122935 | None:intergenic | 40.0% |
| ! | GTAGGTATTGTTCTGGATTC+TGG | + | chr7_4:34122977-34122996 | Msa1150570:intron | 40.0% |
| ! | AGGTATTGTTCTGGATTCTG+GGG | + | chr7_4:34122979-34122998 | Msa1150570:intron | 40.0% |
| AGTGCATATCCCTCGTAAAT+AGG | - | chr7_4:34123025-34123044 | None:intergenic | 40.0% | |
| ATCCAAACGAAGGATTGCAT+GGG | - | chr7_4:34123050-34123069 | None:intergenic | 40.0% | |
| !! | ATGAAGATTTTAACCGAGCG+TGG | + | chr7_4:34123100-34123119 | Msa1150570:CDS | 40.0% |
| GAGGGATATGAAGGAGAAAT+TGG | + | chr7_4:34123159-34123178 | Msa1150570:CDS | 40.0% | |
| TCTTGATTATGAGCAGGAGT+TGG | + | chr7_4:34123192-34123211 | Msa1150570:CDS | 40.0% | |
| ATGGCTGGAACAAAACTTCT+GGG | - | chr7_4:34123306-34123325 | None:intergenic | 40.0% | |
| TCGAGTTAAATGTTGTCTCG+TGG | - | chr7_4:34123357-34123376 | None:intergenic | 40.0% | |
| TGAAGTGTGATGTCGACATT+AGG | + | chr7_4:34123380-34123399 | Msa1150570:CDS | 40.0% | |
| TGTTTCCTGGTATTGCTGAT+AGG | + | chr7_4:34123446-34123465 | Msa1150570:CDS | 40.0% | |
| TATTGCTGATAGGATGAGCA+AGG | + | chr7_4:34123456-34123475 | Msa1150570:CDS | 40.0% | |
| ! | TACTTTTGCTTGTGCAGATG+TGG | + | chr7_4:34123751-34123770 | Msa1150570:intron | 40.0% |
| AAGTTCCTCAACCAACTAGA+TGG | - | chr7_4:34123904-34123923 | None:intergenic | 40.0% | |
| ! | AAGTGTTCTGGTTGTCATAG+TGG | + | chr7_4:34124104-34124123 | Msa1150570:three_prime_UTR | 40.0% |
| ! | CAAGTTGGCTTATGAAACGT+AGG | - | chr7_4:34124217-34124236 | None:intergenic | 40.0% |
| TTAGATTCGATCCTGACCGT+CGG | - | chr7_4:34121788-34121807 | None:intergenic | 45.0% | |
| GGTTCCATTGTCGCAAACTA+AGG | - | chr7_4:34121999-34122018 | None:intergenic | 45.0% | |
| GATTGATACCTTGACCATGC+CGG | - | chr7_4:34122020-34122039 | None:intergenic | 45.0% | |
| TCTGATCAAAAGCTCGTGTC+CGG | + | chr7_4:34122076-34122095 | Msa1150570:intron | 45.0% | |
| GCAGTATTCCCTAGCATAGT+AGG | + | chr7_4:34122270-34122289 | Msa1150570:CDS | 45.0% | |
| ! | ACAGGGGTAATGGTTGGAAT+GGG | + | chr7_4:34122306-34122325 | Msa1150570:CDS | 45.0% |
| GGGATGATATGGAGAAGATC+TGG | + | chr7_4:34122421-34122440 | Msa1150570:CDS | 45.0% | |
| ! | AGAAGAACAGGGTGTTCTTC+AGG | - | chr7_4:34122480-34122499 | None:intergenic | 45.0% |
| GTGCTTCAGTGAGAAGAACA+GGG | - | chr7_4:34122491-34122510 | None:intergenic | 45.0% | |
| ACACACGACACCAAGATTGA+AGG | + | chr7_4:34122737-34122756 | Msa1150570:intron | 45.0% | |
| ! | ATTGTTCTGGATTCTGGGGA+TGG | + | chr7_4:34122983-34123002 | Msa1150570:CDS | 45.0% |
| TCACACGGTTCCTATTTACG+AGG | + | chr7_4:34123012-34123031 | Msa1150570:CDS | 45.0% | |
| CACACGGTTCCTATTTACGA+GGG | + | chr7_4:34123013-34123032 | Msa1150570:CDS | 45.0% | |
| TCCAAACGAAGGATTGCATG+GGG | - | chr7_4:34123049-34123068 | None:intergenic | 45.0% | |
| GATCCAAACGAAGGATTGCA+TGG | - | chr7_4:34123051-34123070 | None:intergenic | 45.0% | |
| ATCCTTCGTTTGGATCTTGC+AGG | + | chr7_4:34123055-34123074 | Msa1150570:CDS | 45.0% | |
| AATTTCTCGCTCTGCTGAAG+TGG | - | chr7_4:34123137-34123156 | None:intergenic | 45.0% | |
| AGCAGAGCGAGAAATTGTGA+GGG | + | chr7_4:34123141-34123160 | Msa1150570:CDS | 45.0% | |
| AAGACCTATGAGCTACCTGA+TGG | + | chr7_4:34123244-34123263 | Msa1150570:CDS | 45.0% | |
| AGACCTATGAGCTACCTGAT+GGG | + | chr7_4:34123245-34123264 | Msa1150570:CDS | 45.0% | |
| GGAACAAAACTTCTGGGCAT+CGG | - | chr7_4:34123300-34123319 | None:intergenic | 45.0% | |
| GATGGCTGGAACAAAACTTC+TGG | - | chr7_4:34123307-34123326 | None:intergenic | 45.0% | |
| TTGTTCCAGCCATCCATGAT+AGG | + | chr7_4:34123313-34123332 | Msa1150570:CDS | 45.0% | |
| TGTTCCAGCCATCCATGATA+GGG | + | chr7_4:34123314-34123333 | Msa1150570:CDS | 45.0% | |
| GATTCCATCCCTATCATGGA+TGG | - | chr7_4:34123325-34123344 | None:intergenic | 45.0% | |
| AGGAGATTCCATCCCTATCA+TGG | - | chr7_4:34123329-34123348 | None:intergenic | 45.0% | |
| ATGATAGGGATGGAATCTCC+TGG | + | chr7_4:34123328-34123347 | Msa1150570:CDS | 45.0% | |
| AATGTTGTCTCGTGGATACC+AGG | - | chr7_4:34123349-34123368 | None:intergenic | 45.0% | |
| GGTAACATTGTGTTGAGTGG+TGG | + | chr7_4:34123415-34123434 | Msa1150570:CDS | 45.0% | |
| ! | GGTGGTTCTACAATGTTTCC+TGG | + | chr7_4:34123433-34123452 | Msa1150570:CDS | 45.0% |
| CTCATCCTATCAGCAATACC+AGG | - | chr7_4:34123454-34123473 | None:intergenic | 45.0% | |
| GAGCAAGGAGATTACAGCAT+TGG | + | chr7_4:34123471-34123490 | Msa1150570:CDS | 45.0% | |
| ! | AGGAAGTACAGTGTCTGGAT+TGG | + | chr7_4:34123535-34123554 | Msa1150570:CDS | 45.0% |
| ! | AAGTACAGTGTCTGGATTGG+AGG | + | chr7_4:34123538-34123557 | Msa1150570:CDS | 45.0% |
| !! | CTGGATTGGAGGTTCCATTT+TGG | + | chr7_4:34123549-34123568 | Msa1150570:CDS | 45.0% |
| !! | TACCTGTTGGAAAGTGCTGA+GGG | - | chr7_4:34123578-34123597 | None:intergenic | 45.0% |
| !! | TTACCTGTTGGAAAGTGCTG+AGG | - | chr7_4:34123579-34123598 | None:intergenic | 45.0% |
| ! | TGTGCAGATGTGGATTGCAA+AGG | + | chr7_4:34123761-34123780 | Msa1150570:intron | 45.0% |
| !! | CAGCCCTTAGTTTGCGACAA+TGG | + | chr7_4:34121992-34122011 | Msa1150570:CDS | 50.0% |
| GGATGTGTCAGTGTCGTATC+CGG | + | chr7_4:34122169-34122188 | Msa1150570:intron | 50.0% | |
| TTGCAGGAGATGATGCACCA+AGG | + | chr7_4:34122247-34122266 | Msa1150570:CDS | 50.0% | |
| TGCAGGAGATGATGCACCAA+GGG | + | chr7_4:34122248-34122267 | Msa1150570:CDS | 50.0% | |
| ATGCTAGGGAATACTGCCCT+TGG | - | chr7_4:34122267-34122286 | None:intergenic | 50.0% | |
| GTGGACGTCCTACTATGCTA+GGG | - | chr7_4:34122281-34122300 | None:intergenic | 50.0% | |
| ! | CACAGGGGTAATGGTTGGAA+TGG | + | chr7_4:34122305-34122324 | Msa1150570:CDS | 50.0% |
| GGTGCTTCAGTGAGAAGAAC+AGG | - | chr7_4:34122492-34122511 | None:intergenic | 50.0% | |
| GTGCTTTCGCTTTATGCGAG+TGG | + | chr7_4:34122600-34122619 | Msa1150570:CDS | 50.0% | |
| TATGCGAGTGGTCGTACAAC+TGG | + | chr7_4:34122612-34122631 | Msa1150570:CDS | 50.0% | |
| !! | CAATCTTGGTGTCGTGTGTC+TGG | - | chr7_4:34122736-34122755 | None:intergenic | 50.0% |
| ! | TGGGGATGGTGTTAGTCACA+CGG | + | chr7_4:34122997-34123016 | Msa1150570:CDS | 50.0% |
| TCCCCATGCAATCCTTCGTT+TGG | + | chr7_4:34123045-34123064 | Msa1150570:CDS | 50.0% | |
| GACCTGCAAGATCCAAACGA+AGG | - | chr7_4:34123060-34123079 | None:intergenic | 50.0% | |
| ! | GGTGAAAGTGTAACCACGCT+CGG | - | chr7_4:34123116-34123135 | None:intergenic | 50.0% |
| CAGCAGAGCGAGAAATTGTG+AGG | + | chr7_4:34123140-34123159 | Msa1150570:CDS | 50.0% | |
| ATTGTGATCACCTGCCCATC+AGG | - | chr7_4:34123262-34123281 | None:intergenic | 50.0% | |
| GATGGGCAGGTGATCACAAT+CGG | + | chr7_4:34123262-34123281 | Msa1150570:CDS | 50.0% | |
| ACACTGTACTTCCTCTCTGG+TGG | - | chr7_4:34123529-34123548 | None:intergenic | 50.0% | |
| CAGACACTGTACTTCCTCTC+TGG | - | chr7_4:34123532-34123551 | None:intergenic | 50.0% | |
| ! | CAGAGAGGAAGTACAGTGTC+TGG | + | chr7_4:34123530-34123549 | Msa1150570:CDS | 50.0% |
| ! | AGTGCTGAGGGATGCCAAAA+TGG | - | chr7_4:34123566-34123585 | None:intergenic | 50.0% |
| ATCCCTCAGCACTTTCCAAC+AGG | + | chr7_4:34123573-34123592 | Msa1150570:CDS | 50.0% | |
| CTGGGCCATCAATAGTACAC+AGG | + | chr7_4:34123799-34123818 | Msa1150570:CDS | 50.0% | |
| AAATCACGGTGCATGAGAGC+TGG | + | chr7_4:34123838-34123857 | Msa1150570:three_prime_UTR | 50.0% | |
| GGTGCATGAGAGCTGGATTA+AGG | + | chr7_4:34123845-34123864 | Msa1150570:three_prime_UTR | 50.0% | |
| TTGCGACAATGGAACCGGCA+TGG | + | chr7_4:34122003-34122022 | Msa1150570:CDS | 55.0% | |
| CAATGGAACCGGCATGGTCA+AGG | + | chr7_4:34122009-34122028 | Msa1150570:CDS | 55.0% | |
| TCGTGTCCGGTGTCCAACAT+CGG | + | chr7_4:34122089-34122108 | Msa1150570:intron | 55.0% | |
| CGATGTCCGATGTTGGACAC+CGG | - | chr7_4:34122098-34122117 | None:intergenic | 55.0% | |
| CGGTGTCCAACATCGGACAT+CGG | + | chr7_4:34122096-34122115 | Msa1150570:intron | 55.0% | |
| !! | TAGGTGCCGATGTCCGATGT+TGG | - | chr7_4:34122105-34122124 | None:intergenic | 55.0% |
| CGTGGACGTCCTACTATGCT+AGG | - | chr7_4:34122282-34122301 | None:intergenic | 55.0% | |
| TAGGACGTCCACGTCACACA+GGG | + | chr7_4:34122289-34122308 | Msa1150570:CDS | 55.0% | |
| TCCACGTCACACAGGGGTAA+TGG | + | chr7_4:34122296-34122315 | Msa1150570:CDS | 55.0% | |
| ACCATTACCCCTGTGTGACG+TGG | - | chr7_4:34122300-34122319 | None:intergenic | 55.0% | |
| ! | CGTCACACAGGGGTAATGGT+TGG | + | chr7_4:34122300-34122319 | Msa1150570:CDS | 55.0% |
| CTGCCCATCAGGTAGCTCAT+AGG | - | chr7_4:34123251-34123270 | None:intergenic | 55.0% | |
| ! | CTATGAGCTACCTGATGGGC+AGG | + | chr7_4:34123249-34123268 | Msa1150570:CDS | 55.0% |
| CCATCCCTATCATGGATGGC+TGG | - | chr7_4:34123321-34123340 | None:intergenic | 55.0% | |
| CCAGCCATCCATGATAGGGA+TGG | + | chr7_4:34123318-34123337 | Msa1150570:CDS | 55.0% | |
| AGGTTGTAGCACCACCAGAG+AGG | + | chr7_4:34123515-34123534 | Msa1150570:CDS | 55.0% | |
| GTAGGACGTCCACGTCACAC+AGG | + | chr7_4:34122288-34122307 | Msa1150570:CDS | 60.0% | |
| AGGACGTCCACGTCACACAG+GGG | + | chr7_4:34122290-34122309 | Msa1150570:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 34121785 | 34124257 | 34121785 | ID=Msa1150570;Name=Msa1150570 |
| chr7_4 | mRNA | 34121785 | 34124257 | 34121785 | ID=Msa1150570-mRNA-1;Parent=Msa1150570;Name=Msa1150570-mRNA-1;_AED=0.02;_eAED=0.02;_QI=186|1|1|1|1|1|4|424|377 |
| chr7_4 | exon | 34121785 | 34122030 | 34121785 | ID=Msa1150570-mRNA-1:exon:8115;Parent=Msa1150570-mRNA-1 |
| chr7_4 | exon | 34122240 | 34122633 | 34122240 | ID=Msa1150570-mRNA-1:exon:8116;Parent=Msa1150570-mRNA-1 |
| chr7_4 | exon | 34122981 | 34123594 | 34122981 | ID=Msa1150570-mRNA-1:exon:8117;Parent=Msa1150570-mRNA-1 |
| chr7_4 | exon | 34123768 | 34124257 | 34123768 | ID=Msa1150570-mRNA-1:exon:8118;Parent=Msa1150570-mRNA-1 |
| chr7_4 | five_prime_UTR | 34121785 | 34121970 | 34121785 | ID=Msa1150570-mRNA-1:five_prime_utr;Parent=Msa1150570-mRNA-1 |
| chr7_4 | CDS | 34121971 | 34122030 | 34121971 | ID=Msa1150570-mRNA-1:cds;Parent=Msa1150570-mRNA-1 |
| chr7_4 | CDS | 34122240 | 34122633 | 34122240 | ID=Msa1150570-mRNA-1:cds;Parent=Msa1150570-mRNA-1 |
| chr7_4 | CDS | 34122981 | 34123594 | 34122981 | ID=Msa1150570-mRNA-1:cds;Parent=Msa1150570-mRNA-1 |
| chr7_4 | CDS | 34123768 | 34123833 | 34123768 | ID=Msa1150570-mRNA-1:cds;Parent=Msa1150570-mRNA-1 |
| chr7_4 | three_prime_UTR | 34123834 | 34124257 | 34123834 | ID=Msa1150570-mRNA-1:three_prime_utr;Parent=Msa1150570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
