Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590640 | XP_003604818.1 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590640 | sp|P29501|TBB2_PEA | 97.982 | 446 | 9 | 0 | 3 | 448 | 1 | 446 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0590640 | 0.835021 | 2.137941e-56 | -8.615850e-47 |
| Msa0002710 | Msa0590640 | 0.802158 | 6.405837e-49 | -8.615850e-47 |
| Msa0012940 | Msa0590640 | 0.828408 | 9.142179e-55 | -8.615850e-47 |
| Msa0016540 | Msa0590640 | 0.818270 | 2.139131e-52 | -8.615850e-47 |
| Msa0030130 | Msa0590640 | 0.806642 | 7.450107e-50 | -8.615850e-47 |
| Msa0032020 | Msa0590640 | 0.817835 | 2.683730e-52 | -8.615850e-47 |
| Msa0035120 | Msa0590640 | 0.831378 | 1.726497e-55 | -8.615850e-47 |
| Msa0039250 | Msa0590640 | 0.819612 | 1.060015e-52 | -8.615850e-47 |
| Msa0041690 | Msa0590640 | 0.809794 | 1.586388e-50 | -8.615850e-47 |
| Msa0047640 | Msa0590640 | 0.823946 | 1.053496e-53 | -8.615850e-47 |
| Msa0052870 | Msa0590640 | 0.839353 | 1.667389e-57 | -8.615850e-47 |
| Msa0069600 | Msa0590640 | 0.832864 | 7.411791e-56 | -8.615850e-47 |
| Msa0089980 | Msa0590640 | 0.820530 | 6.533881e-53 | -8.615850e-47 |
| Msa0090010 | Msa0590640 | 0.820753 | 5.807125e-53 | -8.615850e-47 |
| Msa0093850 | Msa0590640 | 0.838905 | 2.177641e-57 | -8.615850e-47 |
| Msa0097770 | Msa0590640 | 0.803462 | 3.446121e-49 | -8.615850e-47 |
| Msa0098470 | Msa0590640 | 0.852184 | 5.452510e-61 | -8.615850e-47 |
| Msa0101240 | Msa0590640 | 0.816050 | 6.751673e-52 | -8.615850e-47 |
| Msa0106620 | Msa0590640 | 0.822592 | 2.181823e-53 | -8.615850e-47 |
| Msa0108390 | Msa0590640 | 0.809260 | 2.065768e-50 | -8.615850e-47 |
| Msa0112270 | Msa0590640 | 0.829879 | 4.021583e-55 | -8.615850e-47 |
| Msa0116790 | Msa0590640 | 0.840909 | 6.544200e-58 | -8.615850e-47 |
| Msa0130110 | Msa0590640 | 0.855067 | 8.090279e-62 | -8.615850e-47 |
| Msa0133720 | Msa0590640 | 0.818559 | 1.840195e-52 | -8.615850e-47 |
| Msa0133820 | Msa0590640 | 0.821405 | 4.109355e-53 | -8.615850e-47 |
| Msa0138360 | Msa0590640 | 0.849439 | 3.230528e-60 | -8.615850e-47 |
| Msa0141400 | Msa0590640 | 0.811238 | 7.738325e-51 | -8.615850e-47 |
| Msa0144360 | Msa0590640 | 0.814137 | 1.795640e-51 | -8.615850e-47 |
| Msa0147980 | Msa0590640 | 0.829163 | 6.001180e-55 | -8.615850e-47 |
| Msa0152870 | Msa0590640 | 0.809848 | 1.544400e-50 | -8.615850e-47 |
| Msa0168090 | Msa0590640 | 0.805988 | 1.023068e-49 | -8.615850e-47 |
| Msa0175930 | Msa0590640 | 0.808719 | 2.697785e-50 | -8.615850e-47 |
| Msa0181230 | Msa0590640 | 0.829212 | 5.842052e-55 | -8.615850e-47 |
| Msa0187030 | Msa0590640 | 0.807318 | 5.359065e-50 | -8.615850e-47 |
| Msa0209140 | Msa0590640 | 0.822979 | 1.772425e-53 | -8.615850e-47 |
| Msa0211200 | Msa0590640 | 0.813538 | 2.433687e-51 | -8.615850e-47 |
| Msa0225480 | Msa0590640 | 0.813449 | 2.545055e-51 | -8.615850e-47 |
| Msa0229920 | Msa0590640 | 0.811767 | 5.939038e-51 | -8.615850e-47 |
| Msa0230370 | Msa0590640 | 0.826367 | 2.820330e-54 | -8.615850e-47 |
| Msa0378720 | Msa0590640 | 0.800301 | 1.536747e-48 | -8.615850e-47 |
| Msa0380990 | Msa0590640 | 0.817019 | 4.096504e-52 | -8.615850e-47 |
| Msa0381090 | Msa0590640 | 0.810059 | 1.391313e-50 | -8.615850e-47 |
| Msa0388990 | Msa0590640 | 0.823312 | 1.482476e-53 | -8.615850e-47 |
| Msa0417970 | Msa0590640 | 0.811292 | 7.531767e-51 | -8.615850e-47 |
| Msa0435370 | Msa0590640 | 0.844534 | 7.124008e-59 | -8.615850e-47 |
| Msa0435420 | Msa0590640 | 0.838511 | 2.753363e-57 | -8.615850e-47 |
| Msa0435570 | Msa0590640 | 0.850900 | 1.258618e-60 | -8.615850e-47 |
| Msa0479200 | Msa0590640 | 0.813612 | 2.344041e-51 | -8.615850e-47 |
| Msa0241610 | Msa0590640 | 0.807693 | 4.463266e-50 | -8.615850e-47 |
| Msa0241830 | Msa0590640 | 0.852594 | 4.165854e-61 | -8.615850e-47 |
| Msa0261160 | Msa0590640 | 0.854549 | 1.142865e-61 | -8.615850e-47 |
| Msa0261170 | Msa0590640 | 0.822686 | 2.074185e-53 | -8.615850e-47 |
| Msa0270210 | Msa0590640 | 0.802657 | 5.056224e-49 | -8.615850e-47 |
| Msa0279850 | Msa0590640 | 0.851268 | 9.911800e-61 | -8.615850e-47 |
| Msa0300320 | Msa0590640 | 0.825763 | 3.925249e-54 | -8.615850e-47 |
| Msa0301520 | Msa0590640 | 0.810214 | 1.288529e-50 | -8.615850e-47 |
| Msa0307570 | Msa0590640 | 0.838164 | 3.384313e-57 | -8.615850e-47 |
| Msa0312530 | Msa0590640 | 0.814771 | 1.299921e-51 | -8.615850e-47 |
| Msa0322900 | Msa0590640 | 0.859134 | 5.104401e-63 | -8.615850e-47 |
| Msa0323260 | Msa0590640 | 0.805314 | 1.416918e-49 | -8.615850e-47 |
| Msa0328730 | Msa0590640 | 0.817640 | 2.968705e-52 | -8.615850e-47 |
| Msa0336700 | Msa0590640 | 0.807336 | 5.313141e-50 | -8.615850e-47 |
| Msa0341690 | Msa0590640 | 0.839560 | 1.472735e-57 | -8.615850e-47 |
| Msa0361910 | Msa0590640 | 0.800206 | 1.606820e-48 | -8.615850e-47 |
| Msa0485240 | Msa0590640 | 0.854986 | 8.538401e-62 | -8.615850e-47 |
| Msa0518030 | Msa0590640 | 0.866907 | 2.022467e-65 | -8.615850e-47 |
| Msa0519760 | Msa0590640 | 0.810569 | 1.080027e-50 | -8.615850e-47 |
| Msa0519810 | Msa0590640 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0519840 | Msa0590640 | 0.814175 | 1.761482e-51 | -8.615850e-47 |
| Msa0527190 | Msa0590640 | 0.841733 | 3.973068e-58 | -8.615850e-47 |
| Msa0527820 | Msa0590640 | 0.823856 | 1.105413e-53 | -8.615850e-47 |
| Msa0531250 | Msa0590640 | 0.805661 | 1.198701e-49 | -8.615850e-47 |
| Msa0534390 | Msa0590640 | 0.825976 | 3.494521e-54 | -8.615850e-47 |
| Msa0534400 | Msa0590640 | 0.906005 | 2.352574e-80 | -8.615850e-47 |
| Msa0542470 | Msa0590640 | 0.814495 | 1.496855e-51 | -8.615850e-47 |
| Msa0544730 | Msa0590640 | 0.804419 | 2.180022e-49 | -8.615850e-47 |
| Msa0547990 | Msa0590640 | 0.829529 | 4.892773e-55 | -8.615850e-47 |
| Msa0549360 | Msa0590640 | 0.801991 | 6.933154e-49 | -8.615850e-47 |
| Msa0556010 | Msa0590640 | 0.851264 | 9.936188e-61 | -8.615850e-47 |
| Msa0572750 | Msa0590640 | 0.839771 | 1.298407e-57 | -8.615850e-47 |
| Msa0573850 | Msa0590640 | 0.830314 | 3.149659e-55 | -8.615850e-47 |
| Msa0581690 | Msa0590640 | 0.836233 | 1.055227e-56 | -8.615850e-47 |
| Msa0582480 | Msa0590640 | 0.824227 | 9.048268e-54 | -8.615850e-47 |
| Msa0583500 | Msa0590640 | 0.840492 | 8.415451e-58 | -8.615850e-47 |
| Msa0586220 | Msa0590640 | 0.826669 | 2.390200e-54 | -8.615850e-47 |
| Msa0590630 | Msa0590640 | 0.894318 | 2.761148e-75 | -8.615850e-47 |
| Msa0590640 | Msa0597770 | 0.841238 | 5.364236e-58 | -8.615850e-47 |
| Msa0590640 | Msa0598520 | 0.807356 | 5.261134e-50 | -8.615850e-47 |
| Msa0590640 | Msa0619420 | 0.829711 | 4.417609e-55 | -8.615850e-47 |
| Msa0590640 | Msa0622470 | 0.828568 | 8.364288e-55 | -8.615850e-47 |
| Msa0590640 | Msa0624900 | 0.821960 | 3.057762e-53 | -8.615850e-47 |
| Msa0590640 | Msa0626270 | 0.848438 | 6.128286e-60 | -8.615850e-47 |
| Msa0590640 | Msa0626460 | 0.850981 | 1.194483e-60 | -8.615850e-47 |
| Msa0590640 | Msa0630940 | 0.958684 | 1.281326e-116 | -8.615850e-47 |
| Msa0590640 | Msa0638480 | 0.808573 | 2.898925e-50 | -8.615850e-47 |
| Msa0590640 | Msa0644030 | 0.827043 | 1.945701e-54 | -8.615850e-47 |
| Msa0590640 | Msa0644800 | 0.802495 | 5.459319e-49 | -8.615850e-47 |
| Msa0590640 | Msa0650830 | 0.835622 | 1.507502e-56 | -8.615850e-47 |
| Msa0590640 | Msa0659550 | 0.838249 | 3.216215e-57 | -8.615850e-47 |
| Msa0590640 | Msa0663270 | 0.828025 | 1.130451e-54 | -8.615850e-47 |
| Msa0590640 | Msa0664090 | 0.824173 | 9.318931e-54 | -8.615850e-47 |
| Msa0590640 | Msa0664540 | 0.854457 | 1.215273e-61 | -8.615850e-47 |
| Msa0590640 | Msa0669170 | 0.865063 | 7.747198e-65 | -8.615850e-47 |
| Msa0590640 | Msa0669180 | 0.962684 | 3.593200e-121 | -8.615850e-47 |
| Msa0590640 | Msa0689760 | 0.814746 | 1.316483e-51 | -8.615850e-47 |
| Msa0590640 | Msa0692880 | 0.877578 | 5.615117e-69 | -8.615850e-47 |
| Msa0590640 | Msa0698100 | 0.830053 | 3.647321e-55 | -8.615850e-47 |
| Msa0590640 | Msa0698640 | 0.802730 | 4.883739e-49 | -8.615850e-47 |
| Msa0590640 | Msa0701360 | 0.809989 | 1.440308e-50 | -8.615850e-47 |
| Msa0590640 | Msa0702720 | 0.802549 | 5.323112e-49 | -8.615850e-47 |
| Msa0590640 | Msa0706760 | 0.860136 | 2.548108e-63 | -8.615850e-47 |
| Msa0590640 | Msa0707710 | 0.837429 | 5.224606e-57 | -8.615850e-47 |
| Msa0590640 | Msa0712020 | 0.814332 | 1.625933e-51 | -8.615850e-47 |
| Msa0590640 | Msa0713680 | 0.863451 | 2.466502e-64 | -8.615850e-47 |
| Msa0590640 | Msa0716410 | 0.824791 | 6.666487e-54 | -8.615850e-47 |
| Msa0590640 | Msa0716860 | 0.827150 | 1.834250e-54 | -8.615850e-47 |
| Msa0590640 | Msa0721020 | 0.817725 | 2.841064e-52 | -8.615850e-47 |
| Msa0590640 | Msa0750000 | 0.831266 | 1.840581e-55 | -8.615850e-47 |
| Msa0590640 | Msa0750250 | 0.821884 | 3.183613e-53 | -8.615850e-47 |
| Msa0590640 | Msa0757800 | 0.820317 | 7.311397e-53 | -8.615850e-47 |
| Msa0590640 | Msa0797660 | 0.821349 | 4.234110e-53 | -8.615850e-47 |
| Msa0590640 | Msa0799000 | 0.831004 | 2.134561e-55 | -8.615850e-47 |
| Msa0590640 | Msa0804250 | 0.818917 | 1.526465e-52 | -8.615850e-47 |
| Msa0590640 | Msa0835970 | 0.805667 | 1.195058e-49 | -8.615850e-47 |
| Msa0590640 | Msa0837410 | 0.804972 | 1.671254e-49 | -8.615850e-47 |
| Msa0590640 | Msa0861510 | 0.815581 | 8.589066e-52 | -8.615850e-47 |
| Msa0590640 | Msa0861530 | 0.805141 | 1.540117e-49 | -8.615850e-47 |
| Msa0590640 | Msa0861600 | 0.817420 | 3.327983e-52 | -8.615850e-47 |
| Msa0590640 | Msa0871720 | 0.812468 | 4.175391e-51 | -8.615850e-47 |
| Msa0590640 | Msa0903780 | 0.804686 | 1.917999e-49 | -8.615850e-47 |
| Msa0590640 | Msa0934140 | 0.806318 | 8.720955e-50 | -8.615850e-47 |
| Msa0590640 | Msa0937020 | 0.806940 | 6.444898e-50 | -8.615850e-47 |
| Msa0590640 | Msa0937430 | 0.819019 | 1.447084e-52 | -8.615850e-47 |
| Msa0590640 | Msa1027990 | 0.823447 | 1.378547e-53 | -8.615850e-47 |
| Msa0590640 | Msa1031390 | 0.859958 | 2.883562e-63 | -8.615850e-47 |
| Msa0590640 | Msa1034500 | 0.802909 | 4.485602e-49 | -8.615850e-47 |
| Msa0590640 | Msa1035060 | 0.824514 | 7.747717e-54 | -8.615850e-47 |
| Msa0590640 | Msa1043330 | 0.807228 | 5.601508e-50 | -8.615850e-47 |
| Msa0590640 | Msa1044470 | 0.801439 | 8.999462e-49 | -8.615850e-47 |
| Msa0590640 | Msa1072600 | 0.800013 | 1.758443e-48 | -8.615850e-47 |
| Msa0590640 | Msa1074220 | 0.807378 | 5.204062e-50 | -8.615850e-47 |
| Msa0590640 | Msa1076560 | 0.825551 | 4.406463e-54 | -8.615850e-47 |
| Msa0590640 | Msa1085330 | 0.863536 | 2.320482e-64 | -8.615850e-47 |
| Msa0590640 | Msa1088410 | 0.804585 | 2.012531e-49 | -8.615850e-47 |
| Msa0590640 | Msa1116400 | 0.807352 | 5.270847e-50 | -8.615850e-47 |
| Msa0590640 | Msa1123350 | 0.807131 | 5.872784e-50 | -8.615850e-47 |
| Msa0590640 | Msa1127540 | 0.804434 | 2.163946e-49 | -8.615850e-47 |
| Msa0590640 | Msa1127590 | 0.833165 | 6.238153e-56 | -8.615850e-47 |
| Msa0590640 | Msa1129690 | 0.814850 | 1.248735e-51 | -8.615850e-47 |
| Msa0590640 | Msa1145580 | 0.819349 | 1.217000e-52 | -8.615850e-47 |
| Msa0590640 | Msa1150570 | 0.803156 | 3.988248e-49 | -8.615850e-47 |
| Msa0590640 | Msa1157870 | 0.809106 | 2.229380e-50 | -8.615850e-47 |
| Msa0590640 | Msa1162770 | 0.819114 | 1.376319e-52 | -8.615850e-47 |
| Msa0590640 | Msa1165090 | 0.849496 | 3.115111e-60 | -8.615850e-47 |
| Msa0590640 | Msa1169720 | 0.841409 | 4.835501e-58 | -8.615850e-47 |
| Msa0590640 | Msa1204100 | -0.823539 | 1.311958e-53 | -8.615850e-47 |
| Msa0590640 | Msa1213810 | 0.802624 | 5.135486e-49 | -8.615850e-47 |
| Msa0590640 | Msa1214320 | 0.808949 | 2.408334e-50 | -8.615850e-47 |
| Msa0590640 | Msa1223330 | 0.800123 | 1.670528e-48 | -8.615850e-47 |
| Msa0590640 | Msa1234550 | 0.842792 | 2.082548e-58 | -8.615850e-47 |
| Msa0590640 | Msa1253550 | 0.800861 | 1.181652e-48 | -8.615850e-47 |
| Msa0590640 | Msa1268240 | 0.805685 | 1.184652e-49 | -8.615850e-47 |
| Msa0590640 | Msa1277080 | 0.845725 | 3.394281e-59 | -8.615850e-47 |
| Msa0590640 | Msa1278740 | 0.813246 | 2.821325e-51 | -8.615850e-47 |
| Msa0590640 | Msa1317950 | 0.810083 | 1.375047e-50 | -8.615850e-47 |
| Msa0590640 | Msa1317960 | 0.822940 | 1.809893e-53 | -8.615850e-47 |
| Msa0590640 | Msa1326240 | 0.835086 | 2.059556e-56 | -8.615850e-47 |
| Msa0590640 | Msa1329050 | -0.821311 | 4.319954e-53 | -8.615850e-47 |
| Msa0590640 | Msa1335160 | 0.842955 | 1.885302e-58 | -8.615850e-47 |
| Msa0590640 | Msa1348090 | 0.856207 | 3.761511e-62 | -8.615850e-47 |
| Msa0590640 | Msa1352350 | 0.838147 | 3.417322e-57 | -8.615850e-47 |
| Msa0590640 | Msa1360420 | 0.824090 | 9.741996e-54 | -8.615850e-47 |
| Msa0590640 | Msa1366550 | 0.810330 | 1.216473e-50 | -8.615850e-47 |
| Msa0590640 | Msa1369150 | 0.804408 | 2.191913e-49 | -8.615850e-47 |
| Msa0590640 | Msa1369690 | 0.819439 | 1.160656e-52 | -8.615850e-47 |
| Msa0590640 | Msa1371520 | 0.850301 | 1.855277e-60 | -8.615850e-47 |
| Msa0590640 | Msa1373170 | 0.848955 | 4.407435e-60 | -8.615850e-47 |
| Msa0590640 | Msa1373820 | 0.827600 | 1.430111e-54 | -8.615850e-47 |
| Msa0590640 | Msa1393820 | 0.843973 | 1.007506e-58 | -8.615850e-47 |
| Msa0590640 | Msa1410420 | 0.816280 | 5.999628e-52 | -8.615850e-47 |
| Msa0590640 | Msa1411500 | 0.809175 | 2.154957e-50 | -8.615850e-47 |
| Msa0590640 | Msa1411950 | 0.807584 | 4.706703e-50 | -8.615850e-47 |
| Msa0590640 | Msa1418240 | 0.862514 | 4.802503e-64 | -8.615850e-47 |
| Msa0590640 | Msa1420250 | 0.813303 | 2.740303e-51 | -8.615850e-47 |
| Msa0590640 | Msa1424980 | 0.805161 | 1.525882e-49 | -8.615850e-47 |
| Msa0590640 | Msa1427110 | 0.820796 | 5.676964e-53 | -8.615850e-47 |
| Msa0590640 | Msa1446780 | 0.812354 | 4.423557e-51 | -8.615850e-47 |
| Msa0590640 | Msa1453360 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa0590640 | Msa1454530 | 0.816920 | 4.312855e-52 | -8.615850e-47 |
| Msa0590640 | Msa1459460 | 0.836444 | 9.322600e-57 | -8.615850e-47 |
| Msa0590640 | Msa1461540 | 0.847013 | 1.512701e-59 | -8.615850e-47 |
| Msa0590640 | Msa1463030 | 0.822165 | 2.741390e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590640 | MtrunA17_Chr4g0008401 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 943 |
| Msa0590640 | MtrunA17_Chr4g0008361 | 97.991 | 448 | 9 | 0 | 1 | 448 | 1 | 448 | 0.0 | 928 |
| Msa0590640 | MtrunA17_Chr1g0203181 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 856 |
| Msa0590640 | MtrunA17_Chr7g0255791 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0590640 | MtrunA17_Chr2g0292921 | 95.581 | 430 | 19 | 0 | 1 | 430 | 1 | 430 | 0.0 | 846 |
| Msa0590640 | MtrunA17_Chr4g0007371 | 95.602 | 432 | 17 | 1 | 1 | 430 | 1 | 432 | 0.0 | 846 |
| Msa0590640 | MtrunA17_Chr4g0051631 | 94.884 | 430 | 22 | 0 | 1 | 430 | 1 | 430 | 0.0 | 841 |
| Msa0590640 | MtrunA17_Chr3g0142731 | 92.593 | 432 | 30 | 1 | 1 | 430 | 1 | 432 | 0.0 | 827 |
| Msa0590640 | MtrunA17_Chr8g0393021 | 90.068 | 443 | 41 | 2 | 1 | 440 | 1 | 443 | 0.0 | 820 |
| Msa0590640 | MtrunA17_Chr8g0386781 | 90.930 | 430 | 39 | 0 | 1 | 430 | 1 | 430 | 0.0 | 818 |
| Msa0590640 | MtrunA17_Chr8g0378821 | 42.396 | 434 | 240 | 2 | 1 | 424 | 1 | 434 | 2.62e-125 | 371 |
| Msa0590640 | MtrunA17_Chr3g0140821 | 42.396 | 434 | 240 | 2 | 1 | 424 | 1 | 434 | 3.46e-124 | 368 |
| Msa0590640 | MtrunA17_Chr1g0206881 | 41.907 | 451 | 249 | 3 | 1 | 441 | 1 | 448 | 6.36e-124 | 367 |
| Msa0590640 | MtrunA17_Chr4g0054511 | 42.105 | 437 | 237 | 3 | 1 | 424 | 1 | 434 | 9.16e-123 | 365 |
| Msa0590640 | MtrunA17_Chr7g0253411 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 1.35e-122 | 364 |
| Msa0590640 | MtrunA17_Chr6g0461281 | 40.618 | 453 | 253 | 3 | 1 | 442 | 1 | 448 | 5.85e-121 | 360 |
| Msa0590640 | MtrunA17_Chr2g0300671 | 38.018 | 434 | 256 | 4 | 1 | 425 | 1 | 430 | 1.84e-99 | 305 |
| Msa0590640 | MtrunA17_Chr2g0300491 | 37.416 | 449 | 268 | 4 | 1 | 441 | 1 | 444 | 4.44e-98 | 302 |
| Msa0590640 | MtrunA17_Chr7g0275431 | 35.160 | 438 | 267 | 7 | 2 | 423 | 3 | 439 | 4.74e-97 | 299 |
| Msa0590640 | MtrunA17_Chr3g0109241 | 32.593 | 135 | 83 | 1 | 269 | 395 | 4 | 138 | 2.50e-21 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590640 | AT5G62690.1 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 858 |
| Msa0590640 | AT5G62700.1 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 858 |
| Msa0590640 | AT5G23860.2 | 96.977 | 430 | 13 | 0 | 1 | 430 | 1 | 430 | 0.0 | 855 |
| Msa0590640 | AT5G23860.1 | 96.977 | 430 | 13 | 0 | 1 | 430 | 1 | 430 | 0.0 | 855 |
| Msa0590640 | AT5G12250.1 | 95.581 | 430 | 19 | 0 | 1 | 430 | 1 | 430 | 0.0 | 847 |
| Msa0590640 | AT2G29550.1 | 95.360 | 431 | 20 | 0 | 1 | 431 | 1 | 431 | 0.0 | 844 |
| Msa0590640 | AT1G75780.1 | 93.968 | 431 | 25 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| Msa0590640 | AT5G44340.1 | 93.488 | 430 | 28 | 0 | 1 | 430 | 1 | 430 | 0.0 | 833 |
| Msa0590640 | AT4G20890.1 | 93.488 | 430 | 28 | 0 | 1 | 430 | 1 | 430 | 0.0 | 833 |
| Msa0590640 | AT1G20010.1 | 93.271 | 431 | 28 | 1 | 1 | 430 | 1 | 431 | 0.0 | 831 |
| Msa0590640 | AT5G19780.1 | 42.166 | 434 | 241 | 2 | 1 | 424 | 1 | 434 | 5.64e-125 | 370 |
| Msa0590640 | AT5G19770.1 | 42.166 | 434 | 241 | 2 | 1 | 424 | 1 | 434 | 5.64e-125 | 370 |
| Msa0590640 | AT1G64740.1 | 41.935 | 434 | 242 | 2 | 1 | 424 | 1 | 434 | 9.60e-125 | 370 |
| Msa0590640 | AT4G14960.2 | 42.396 | 434 | 240 | 2 | 1 | 424 | 1 | 434 | 4.23e-123 | 366 |
| Msa0590640 | AT1G50010.1 | 42.334 | 437 | 236 | 3 | 1 | 424 | 1 | 434 | 2.82e-122 | 363 |
| Msa0590640 | AT1G04820.1 | 42.334 | 437 | 236 | 3 | 1 | 424 | 1 | 434 | 2.82e-122 | 363 |
| Msa0590640 | AT4G14960.1 | 42.487 | 386 | 212 | 2 | 1 | 376 | 1 | 386 | 1.35e-103 | 315 |
| Msa0590640 | AT5G05620.1 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 2.51e-97 | 300 |
| Msa0590640 | AT3G61650.1 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 4.35e-97 | 300 |
Find 155 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCTTCACTTCTTCATGTT+GGG | 0.178713 | 4_2:-14206956 | Msa0590640:CDS |
| AAAATCGAAACCCTAGAAAT+TGG | 0.183368 | 4_2:+14208579 | None:intergenic |
| TCTTCAAATTCCCAATTTCT+AGG | 0.197150 | 4_2:-14208590 | Msa0590640:five_prime_UTR |
| ACAAACCACTTCCCAGAATT+TGG | 0.203956 | 4_2:+14208489 | None:intergenic |
| ACCAAATCGGAGCCAAATTC+TGG | 0.224594 | 4_2:-14208501 | Msa0590640:CDS |
| TTCATAATCTCTTTGTTGTT+GGG | 0.272964 | 4_2:-14206314 | Msa0590640:three_prime_UTR |
| AAAGTAAGCATCATCCTATC+TGG | 0.292949 | 4_2:+14207382 | None:intergenic |
| AATTAAATTGCTTACAGCTT+GGG | 0.308906 | 4_2:+14207203 | None:intergenic |
| ACAGTTGATTTCACGTTGTT+TGG | 0.311816 | 4_2:+14206704 | None:intergenic |
| AGAGTGGTGCTGGGAATAAC+TGG | 0.315864 | 4_2:-14208261 | Msa0590640:CDS |
| ATGCCGCAACTTCCTGTTGC+CGG | 0.317833 | 4_2:-14206337 | Msa0590640:three_prime_UTR |
| TATAAGTAGCAATCTATGTT+TGG | 0.328893 | 4_2:-14206173 | Msa0590640:three_prime_UTR |
| GTTCATAATCTCTTTGTTGT+TGG | 0.332718 | 4_2:-14206315 | Msa0590640:three_prime_UTR |
| CCCTGATCTTTGAAATCAAA+AGG | 0.336806 | 4_2:+14207413 | None:intergenic |
| AAGATGGCTTCCACATTCAT+TGG | 0.346607 | 4_2:-14206656 | Msa0590640:CDS |
| TGAAAACAGTGATTGCTTGC+AGG | 0.355551 | 4_2:-14208170 | Msa0590640:CDS |
| TAGGAAGCTTGCAGTGAATC+TGG | 0.356710 | 4_2:-14206990 | Msa0590640:CDS |
| CCCAGAATTTGGCTCCGATT+TGG | 0.356984 | 4_2:+14208500 | None:intergenic |
| GTGTTTGGTCAGAGTGGTGC+TGG | 0.358408 | 4_2:-14208271 | Msa0590640:CDS |
| CTCAAGCCTCATCATGTTCC+TGG | 0.362588 | 4_2:+14206411 | None:intergenic |
| CTCCGATTTGGTTTCCGCAT+TGG | 0.363943 | 4_2:+14208512 | None:intergenic |
| GTCAGCTAAACTCCGATCTT+AGG | 0.365614 | 4_2:-14207009 | Msa0590640:CDS |
| ATAAGTAGCAATCTATGTTT+GGG | 0.368858 | 4_2:-14206172 | Msa0590640:three_prime_UTR |
| TCGCCTTCACTTCTTCATGT+TGG | 0.381483 | 4_2:-14206957 | Msa0590640:CDS |
| CACATTTGCTGTGTGATCTC+TGG | 0.382312 | 4_2:+14206881 | None:intergenic |
| TTTCTATGTGAGATGTTTGT+AGG | 0.383795 | 4_2:-14206242 | Msa0590640:three_prime_UTR |
| TACTGCTATGTTCAGGAGAA+AGG | 0.384630 | 4_2:-14206585 | Msa0590640:CDS |
| CTTGGTGGAGGAACTGGATC+TGG | 0.390493 | 4_2:-14207445 | Msa0590640:CDS |
| GTGAGGTATCGTCCGTGTCT+AGG | 0.392730 | 4_2:+14206827 | None:intergenic |
| CATTCACTTGGTGGAGGAAC+TGG | 0.394644 | 4_2:-14207451 | Msa0590640:CDS |
| TAAACAATCAAGCTTCTTCA+AGG | 0.397641 | 4_2:+14206141 | None:intergenic |
| GGCAGCACACATCATGTTCT+TGG | 0.397808 | 4_2:+14206853 | None:intergenic |
| AGACCGGATAACTTTGTGTT+TGG | 0.404999 | 4_2:-14208286 | Msa0590640:CDS |
| GTTTGTGATATTCCACCAAC+AGG | 0.410840 | 4_2:-14206683 | Msa0590640:CDS |
| ATTCTGTTCTTGATGTTGTT+AGG | 0.411260 | 4_2:-14208201 | Msa0590640:CDS |
| CAAGAGGTTCTCAGCAGTAC+AGG | 0.422159 | 4_2:-14206916 | Msa0590640:CDS |
| ACTCCTCCTACTTCGTTGAA+TGG | 0.425380 | 4_2:-14206730 | Msa0590640:CDS |
| AGCAATTTACTGCTATGTTC+AGG | 0.432308 | 4_2:-14206592 | Msa0590640:CDS |
| GGTTCTGATGGATCTTGAAC+CGG | 0.447302 | 4_2:-14208353 | Msa0590640:CDS |
| CGGTGATTCAGATCTGCAAT+TGG | 0.448936 | 4_2:-14208431 | Msa0590640:CDS |
| CTTCAAATTCCCAATTTCTA+GGG | 0.453323 | 4_2:-14208589 | Msa0590640:five_prime_UTR |
| AGAGATTATGAACCGGCAAC+AGG | 0.457660 | 4_2:+14206325 | None:intergenic |
| GCTCATCTTGCCTCTGAAGA+TGG | 0.460024 | 4_2:+14206796 | None:intergenic |
| AGCTTGGGGTTGTGAGCTTG+AGG | 0.465163 | 4_2:+14207218 | None:intergenic |
| TTGATATCAGCAACCATGTC+TGG | 0.467321 | 4_2:-14207058 | Msa0590640:CDS |
| GGGTTGTGAGCTTGAGGGTA+CGG | 0.468084 | 4_2:+14207224 | None:intergenic |
| CAAGTATGCCATTCACTTGG+TGG | 0.468453 | 4_2:-14207460 | Msa0590640:CDS |
| TTCATCCCAAAATCAAAATG+AGG | 0.469231 | 4_2:-14208558 | Msa0590640:exon |
| CCAAATCGGAGCCAAATTCT+GGG | 0.471127 | 4_2:-14208500 | Msa0590640:CDS |
| ACATGTTGTTTGAGGTTCCC+TGG | 0.471364 | 4_2:-14207031 | Msa0590640:CDS |
| AAATCGAAACCCTAGAAATT+GGG | 0.472141 | 4_2:+14208580 | None:intergenic |
| TCATAATCTCTTTGTTGTTG+GGG | 0.473745 | 4_2:-14206313 | Msa0590640:three_prime_UTR |
| AACAGACAAAGTAGCATTGT+AGG | 0.473876 | 4_2:+14207315 | None:intergenic |
| GCCTTCACTTCTTCATGTTG+GGG | 0.476323 | 4_2:-14206955 | Msa0590640:CDS |
| CGTTCCGAGAGCGGTTCTGA+TGG | 0.476396 | 4_2:-14208365 | Msa0590640:CDS |
| GGAGAAAGGCTTTCTTGCAT+TGG | 0.478824 | 4_2:-14206571 | Msa0590640:CDS |
| CTGGTGTCACATGTTGTTTG+AGG | 0.483612 | 4_2:-14207039 | Msa0590640:CDS |
| GGATGAGTATGAAGATGAAG+AGG | 0.487277 | 4_2:-14206444 | Msa0590640:CDS |
| CGGAGCCAAATTCTGGGAAG+TGG | 0.489877 | 4_2:-14208494 | Msa0590640:CDS |
| GGCCAATGCGGAAACCAAAT+CGG | 0.489919 | 4_2:-14208514 | Msa0590640:CDS |
| ATTAAATTGCTTACAGCTTG+GGG | 0.491150 | 4_2:+14207204 | None:intergenic |
| AGATCGGAGTTTAGCTGACC+AGG | 0.493352 | 4_2:+14207013 | None:intergenic |
| ACCACAGTGTCAGAAACCTT+TGG | 0.496499 | 4_2:+14207343 | None:intergenic |
| AAGAAGTGAAGGCGAGGGAA+TGG | 0.496668 | 4_2:+14206965 | None:intergenic |
| CCTGATCTTTGAAATCAAAA+GGG | 0.497319 | 4_2:+14207414 | None:intergenic |
| TGAGTATGAAGATGAAGAGG+AGG | 0.497865 | 4_2:-14206441 | Msa0590640:CDS |
| GGAGGAACTGGATCTGGAAT+GGG | 0.502255 | 4_2:-14207439 | Msa0590640:CDS |
| CAGAGATCACACAGCAAATG+TGG | 0.502624 | 4_2:-14206880 | Msa0590640:CDS |
| TGAGGTATCGTCCGTGTCTA+GGG | 0.503135 | 4_2:+14206828 | None:intergenic |
| CAGTTCCTCCACCAAGTGAA+TGG | 0.504167 | 4_2:+14207452 | None:intergenic |
| TAAATTGCTCACTCACCCTT+CGG | 0.505522 | 4_2:+14206606 | None:intergenic |
| TCCACCAACAGGGTTGAAGA+TGG | 0.506013 | 4_2:-14206672 | Msa0590640:CDS |
| GCTTTCTTGCATTGGTACAC+TGG | 0.506815 | 4_2:-14206563 | Msa0590640:CDS |
| TCAGGGAAGAATACCCAGAT+AGG | 0.508115 | 4_2:-14207396 | Msa0590640:CDS |
| GCTTGGGGTTGTGAGCTTGA+GGG | 0.508788 | 4_2:+14207219 | None:intergenic |
| ACATGGTTGCTGATATCAAA+TGG | 0.509581 | 4_2:+14207062 | None:intergenic |
| TTGCATTGGTACACTGGTGA+AGG | 0.510492 | 4_2:-14206557 | Msa0590640:CDS |
| CTGGGAATAACTGGGCGAAA+GGG | 0.514072 | 4_2:-14208252 | Msa0590640:CDS |
| GTGTTACACATATTCCATCT+AGG | 0.517837 | 4_2:+14206363 | None:intergenic |
| CACTGCAAGCTTCCTAAGAT+CGG | 0.518766 | 4_2:+14206997 | None:intergenic |
| GAAAACAGTGATTGCTTGCA+GGG | 0.518786 | 4_2:-14208169 | Msa0590640:intron |
| GCTGGGAATAACTGGGCGAA+AGG | 0.522262 | 4_2:-14208253 | Msa0590640:CDS |
| GGTTTCCGCATTGGCCACCT+TGG | 0.523334 | 4_2:+14208521 | None:intergenic |
| TGACCAAACACAAAGTTATC+CGG | 0.525289 | 4_2:+14208283 | None:intergenic |
| TGGAGGAACTGGATCTGGAA+TGG | 0.526615 | 4_2:-14207440 | Msa0590640:CDS |
| GCCATCTTCAACCCTGTTGG+TGG | 0.528481 | 4_2:+14206671 | None:intergenic |
| ACGATGGATAGTGTCCGGTC+TGG | 0.529195 | 4_2:-14208328 | Msa0590640:CDS |
| TTCTATGTGAGATGTTTGTA+GGG | 0.529518 | 4_2:-14206241 | Msa0590640:three_prime_UTR |
| TGAAAACGCAGATGAATGTA+TGG | 0.535240 | 4_2:-14207281 | Msa0590640:CDS |
| TGGAATCCATTCAACGAAGT+AGG | 0.538111 | 4_2:+14206724 | None:intergenic |
| AACTTTGTGTTTGGTCAGAG+TGG | 0.539264 | 4_2:-14208277 | Msa0590640:CDS |
| CATAATCTCTTTGTTGTTGG+GGG | 0.540537 | 4_2:-14206312 | Msa0590640:three_prime_UTR |
| TTTGCACCTTTGACTTCAAG+AGG | 0.541243 | 4_2:-14206932 | Msa0590640:CDS |
| TGAATCACCGACGTAACGAC+CGG | 0.547896 | 4_2:+14208444 | None:intergenic |
| TCATCCCAAAATCAAAATGA+GGG | 0.551966 | 4_2:-14208557 | Msa0590640:exon |
| GAACATGGAATCGATCCAAC+CGG | 0.553550 | 4_2:-14208463 | Msa0590640:CDS |
| TGTCAGAAACCTTTGGTGAA+GGG | 0.553748 | 4_2:+14207350 | None:intergenic |
| AGATCCATCAGAACCGCTCT+CGG | 0.558735 | 4_2:+14208361 | None:intergenic |
| TTGGTACACTGGTGAAGGAA+TGG | 0.562019 | 4_2:-14206552 | Msa0590640:CDS |
| ACAACAAAGAGATTATGAAC+CGG | 0.563426 | 4_2:+14206318 | None:intergenic |
| TTTCAAGTATGCCATTCACT+TGG | 0.563572 | 4_2:-14207463 | Msa0590640:CDS |
| GTGTCAGAAACCTTTGGTGA+AGG | 0.564783 | 4_2:+14207349 | None:intergenic |
| TGTTTGGTCAGAGTGGTGCT+GGG | 0.566395 | 4_2:-14208270 | Msa0590640:CDS |
| AAGTAAGCATCATCCTATCT+GGG | 0.568440 | 4_2:+14207383 | None:intergenic |
| AAGAGGTTCTCAGCAGTACA+GGG | 0.571950 | 4_2:-14206915 | Msa0590640:CDS |
| GGATCTTGAACCGGGAACGA+TGG | 0.572205 | 4_2:-14208344 | Msa0590640:CDS |
| AGTGTCCGGTCTGGACCGTA+CGG | 0.574566 | 4_2:-14208319 | Msa0590640:CDS |
| GTTCTGATGGATCTTGAACC+GGG | 0.574840 | 4_2:-14208352 | Msa0590640:CDS |
| CGGACACTATCCATCGTTCC+CGG | 0.575504 | 4_2:+14208334 | None:intergenic |
| CGGGAACGATGGATAGTGTC+CGG | 0.578391 | 4_2:-14208333 | Msa0590640:CDS |
| TGAGAACCTCTTGAAGTCAA+AGG | 0.582877 | 4_2:+14206926 | None:intergenic |
| ACCAAAGGTTTCTGACACTG+TGG | 0.583299 | 4_2:-14207344 | Msa0590640:CDS |
| TCACCGACGTAACGACCGGT+TGG | 0.584567 | 4_2:+14208448 | None:intergenic |
| ACCCCAACATGAAGAAGTGA+AGG | 0.588926 | 4_2:+14206954 | None:intergenic |
| TCAAGATGCTACTGCAGAGG+AGG | 0.589411 | 4_2:-14206465 | Msa0590640:CDS |
| TGGAAGATTCGTTCCGAGAG+CGG | 0.591557 | 4_2:-14208374 | Msa0590640:CDS |
| GAAGCCATCTTCAACCCTGT+TGG | 0.594921 | 4_2:+14206668 | None:intergenic |
| CAATTCAAGAAATGTTCCGA+AGG | 0.595372 | 4_2:-14206622 | Msa0590640:CDS |
| AATTCAAGAAATGTTCCGAA+GGG | 0.601207 | 4_2:-14206621 | Msa0590640:CDS |
| TGGTGAAGGAATGGATGAGA+TGG | 0.601920 | 4_2:-14206543 | Msa0590640:CDS |
| AGGGAAATTCTTCACATCCA+AGG | 0.605397 | 4_2:-14208538 | Msa0590640:CDS |
| ACAGACAAAGTAGCATTGTA+GGG | 0.608931 | 4_2:+14207316 | None:intergenic |
| TCTGACCGTACGGTCCAGAC+CGG | 0.610666 | 4_2:+14208314 | None:intergenic |
| ACTGCATCAGCCATCTTCAG+AGG | 0.610984 | 4_2:-14206806 | Msa0590640:CDS |
| CACATCCAAGGTGGCCAATG+CGG | 0.611846 | 4_2:-14208526 | Msa0590640:CDS |
| CAACATGAATGATCTTGTGT+CGG | 0.617924 | 4_2:-14206501 | Msa0590640:CDS |
| GTATGCCATTCACTTGGTGG+AGG | 0.619872 | 4_2:-14207457 | Msa0590640:CDS |
| CAGGAACATGATGAGGCTTG+AGG | 0.620065 | 4_2:-14206410 | Msa0590640:exon |
| TGAAGAGGAGGATTATCACC+AGG | 0.622769 | 4_2:-14206429 | Msa0590640:CDS |
| AGTTGAGTTTCCAATGAATG+TGG | 0.624190 | 4_2:+14206646 | None:intergenic |
| GAACCGGCAACAGGAAGTTG+CGG | 0.624660 | 4_2:+14206334 | None:intergenic |
| GAGTGGTGCTGGGAATAACT+GGG | 0.624747 | 4_2:-14208260 | Msa0590640:CDS |
| GAAGTGGTTTGTGCTGAACA+TGG | 0.625902 | 4_2:-14208478 | Msa0590640:CDS |
| AACATGAAGAAGTGAAGGCG+AGG | 0.627650 | 4_2:+14206959 | None:intergenic |
| ATTCAGATCTGCAATTGGAA+CGG | 0.628300 | 4_2:-14208426 | Msa0590640:CDS |
| AATCCATTCAACGAAGTAGG+AGG | 0.631398 | 4_2:+14206727 | None:intergenic |
| GCGAAAGGGCATTACACTGA+AGG | 0.632029 | 4_2:-14208238 | Msa0590640:CDS |
| GTATCGTCCGTGTCTAGGGT+CGG | 0.633110 | 4_2:+14206832 | None:intergenic |
| GTACGGTCAGATCTTTAGAC+CGG | 0.637619 | 4_2:-14208302 | Msa0590640:CDS |
| ACAACATGTGACACCAGACA+TGG | 0.642095 | 4_2:+14207045 | None:intergenic |
| ATATCAAGATGCTACTGCAG+AGG | 0.642344 | 4_2:-14206468 | Msa0590640:CDS |
| AGAGATCACACAGCAAATGT+GGG | 0.647959 | 4_2:-14206879 | Msa0590640:CDS |
| ACATGAAGAAGTGAAGGCGA+GGG | 0.651021 | 4_2:+14206960 | None:intergenic |
| GGTCTAAAGATCTGACCGTA+CGG | 0.651719 | 4_2:+14208304 | None:intergenic |
| TATTACAATGAAGCAAGTGG+TGG | 0.660724 | 4_2:-14208394 | Msa0590640:CDS |
| TTATCACCAGGAACATGATG+AGG | 0.661770 | 4_2:-14206417 | Msa0590640:CDS |
| TTTGTGATATTCCACCAACA+GGG | 0.665479 | 4_2:-14206682 | Msa0590640:CDS |
| CAGAGGCAAGATGAGCACAA+AGG | 0.668708 | 4_2:-14206789 | Msa0590640:CDS |
| TGTGCTGCCGACCCTAGACA+CGG | 0.672597 | 4_2:-14206839 | Msa0590640:CDS |
| GATCCAACCGGTCGTTACGT+CGG | 0.675174 | 4_2:-14208451 | Msa0590640:CDS |
| GATCGGAGTTTAGCTGACCA+GGG | 0.686480 | 4_2:+14207014 | None:intergenic |
| GTGTATTACAATGAAGCAAG+TGG | 0.700863 | 4_2:-14208397 | Msa0590640:CDS |
| GAAATTCTTCACATCCAAGG+TGG | 0.724676 | 4_2:-14208535 | Msa0590640:CDS |
| TGAAGATGGCTGATGCAGTG+AGG | 0.739156 | 4_2:+14206810 | None:intergenic |
| GGATGAGATGGAGTTCACTG+AGG | 0.802592 | 4_2:-14206531 | Msa0590640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATTTTTAAATTT+AGG | - | chr4_2:14206623-14206642 | Msa0590640:CDS | 0.0% |
| !!! | TTATTTTATTTTTAAATTTA+GGG | - | chr4_2:14206624-14206643 | Msa0590640:CDS | 0.0% |
| !!! | TCTTTTTCTTTTTTTATGTA+TGG | - | chr4_2:14206749-14206768 | Msa0590640:CDS | 15.0% |
| !!! | AGTTTTATTAAAAAAAGAAG+AGG | + | chr4_2:14206902-14206921 | None:intergenic | 15.0% |
| !! | TTATTTACAAATTGTGAATT+CGG | - | chr4_2:14206950-14206969 | Msa0590640:CDS | 15.0% |
| !!! | GTTTTTTTCTTATTAAAAGT+TGG | - | chr4_2:14207073-14207092 | Msa0590640:CDS | 15.0% |
| !!! | AAATGAGTTTTTTGTTTTGT+GGG | + | chr4_2:14206098-14206117 | None:intergenic | 20.0% |
| !! | TGTGGAATTTGTATATTTAA+AGG | - | chr4_2:14206975-14206994 | Msa0590640:CDS | 20.0% |
| !! | TATAAACTATTATTGTTCTG+TGG | - | chr4_2:14207004-14207023 | Msa0590640:CDS | 20.0% |
| !!! | GATGTTTGTTTTTTATGTAA+AGG | - | chr4_2:14207207-14207226 | Msa0590640:intron | 20.0% |
| !!! | TTTTTTTGTGTTTGTTACTA+TGG | - | chr4_2:14207614-14207633 | Msa0590640:intron | 20.0% |
| !!! | AATGAGTTTTTTGTTTTGTG+GGG | + | chr4_2:14206097-14206116 | None:intergenic | 25.0% |
| !!! | GAAATGAGTTTTTTGTTTTG+TGG | + | chr4_2:14206099-14206118 | None:intergenic | 25.0% |
| !!! | ATTTCCCTCATTTTGATTTT+GGG | + | chr4_2:14206194-14206213 | None:intergenic | 25.0% |
| !!! | AATTTCCCTCATTTTGATTT+TGG | + | chr4_2:14206195-14206214 | None:intergenic | 25.0% |
| !!! | TTTTGTGGGTTAATTTGTTA+TGG | - | chr4_2:14206657-14206676 | Msa0590640:CDS | 25.0% |
| !!! | TTTGTGGGTTAATTTGTTAT+GGG | - | chr4_2:14206658-14206677 | Msa0590640:CDS | 25.0% |
| !! | TATTTTGCATGATTTTGAAC+TGG | - | chr4_2:14206708-14206727 | Msa0590640:CDS | 25.0% |
| ! | TATATGATATGAAATTGTGC+TGG | - | chr4_2:14206795-14206814 | Msa0590640:CDS | 25.0% |
| ! | TTTAATAAAACTGTAGCCAA+AGG | - | chr4_2:14206910-14206929 | Msa0590640:CDS | 25.0% |
| ! | TTAATAAAACTGTAGCCAAA+GGG | - | chr4_2:14206911-14206930 | Msa0590640:CDS | 25.0% |
| ! | AATTAAATTGCTTACAGCTT+GGG | + | chr4_2:14207544-14207563 | None:intergenic | 25.0% |
| ! | AAATTAAATTGCTTACAGCT+TGG | + | chr4_2:14207545-14207564 | None:intergenic | 25.0% |
| ! | GAAAGAAGTCATTCAAAAAA+GGG | + | chr4_2:14207572-14207591 | None:intergenic | 25.0% |
| ! | TGAAAGAAGTCATTCAAAAA+AGG | + | chr4_2:14207573-14207592 | None:intergenic | 25.0% |
| !!! | TTCATAATCTCTTTGTTGTT+GGG | - | chr4_2:14208430-14208449 | Msa0590640:CDS | 25.0% |
| ! | TATAAGTAGCAATCTATGTT+TGG | - | chr4_2:14208571-14208590 | Msa0590640:five_prime_UTR | 25.0% |
| ! | ATAAGTAGCAATCTATGTTT+GGG | - | chr4_2:14208572-14208591 | Msa0590640:five_prime_UTR | 25.0% |
| TCTTCAAATTCCCAATTTCT+AGG | - | chr4_2:14206154-14206173 | Msa0590640:three_prime_UTR | 30.0% | |
| CTTCAAATTCCCAATTTCTA+GGG | - | chr4_2:14206155-14206174 | Msa0590640:three_prime_UTR | 30.0% | |
| AAATCGAAACCCTAGAAATT+GGG | + | chr4_2:14206167-14206186 | None:intergenic | 30.0% | |
| AAAATCGAAACCCTAGAAAT+TGG | + | chr4_2:14206168-14206187 | None:intergenic | 30.0% | |
| TTCATCCCAAAATCAAAATG+AGG | - | chr4_2:14206186-14206205 | Msa0590640:three_prime_UTR | 30.0% | |
| TCATCCCAAAATCAAAATGA+GGG | - | chr4_2:14206187-14206206 | Msa0590640:three_prime_UTR | 30.0% | |
| ATTCTGTTCTTGATGTTGTT+AGG | - | chr4_2:14206543-14206562 | Msa0590640:CDS | 30.0% | |
| CATGCAAAATATACGACATA+TGG | + | chr4_2:14206699-14206718 | None:intergenic | 30.0% | |
| ! | TTGAACTGGATCTGAAATTT+AGG | - | chr4_2:14206722-14206741 | Msa0590640:CDS | 30.0% |
| ! | TGAACTGGATCTGAAATTTA+GGG | - | chr4_2:14206723-14206742 | Msa0590640:CDS | 30.0% |
| !!! | TGTGTGTGTGATTTTGATTT+AGG | - | chr4_2:14207044-14207063 | Msa0590640:CDS | 30.0% |
| !!! | GTGTGTGTGATTTTGATTTA+GGG | - | chr4_2:14207045-14207064 | Msa0590640:CDS | 30.0% |
| TTGAATGCCATGTTGTTAAT+TGG | - | chr4_2:14207100-14207119 | Msa0590640:intron | 30.0% | |
| TGAATGCCATGTTGTTAATT+GGG | - | chr4_2:14207101-14207120 | Msa0590640:intron | 30.0% | |
| GAGGGTAAAACAAATCAAAT+TGG | + | chr4_2:14207130-14207149 | None:intergenic | 30.0% | |
| GATAAACAATTGTTGTCTTG+TGG | - | chr4_2:14207229-14207248 | Msa0590640:CDS | 30.0% | |
| !! | CCTGATCTTTGAAATCAAAA+GGG | + | chr4_2:14207333-14207352 | None:intergenic | 30.0% |
| !!! | CCTTTTGATTTCAAAGATCA+GGG | - | chr4_2:14207331-14207350 | Msa0590640:CDS | 30.0% |
| ATTAAATTGCTTACAGCTTG+GGG | + | chr4_2:14207543-14207562 | None:intergenic | 30.0% | |
| AATTCAAGAAATGTTCCGAA+GGG | - | chr4_2:14208123-14208142 | Msa0590640:intron | 30.0% | |
| ACAACAAAGAGATTATGAAC+CGG | + | chr4_2:14208429-14208448 | None:intergenic | 30.0% | |
| ! | GTTCATAATCTCTTTGTTGT+TGG | - | chr4_2:14208429-14208448 | Msa0590640:CDS | 30.0% |
| !! | TCATAATCTCTTTGTTGTTG+GGG | - | chr4_2:14208431-14208450 | Msa0590640:CDS | 30.0% |
| TTTCTATGTGAGATGTTTGT+AGG | - | chr4_2:14208502-14208521 | Msa0590640:CDS | 30.0% | |
| TTCTATGTGAGATGTTTGTA+GGG | - | chr4_2:14208503-14208522 | Msa0590640:CDS | 30.0% | |
| TAAACAATCAAGCTTCTTCA+AGG | + | chr4_2:14208606-14208625 | None:intergenic | 30.0% | |
| ATTCAGATCTGCAATTGGAA+CGG | - | chr4_2:14206318-14206337 | Msa0590640:three_prime_UTR | 35.0% | |
| GTGTATTACAATGAAGCAAG+TGG | - | chr4_2:14206347-14206366 | Msa0590640:three_prime_UTR | 35.0% | |
| TATTACAATGAAGCAAGTGG+TGG | - | chr4_2:14206350-14206369 | Msa0590640:three_prime_UTR | 35.0% | |
| TGACCAAACACAAAGTTATC+CGG | + | chr4_2:14206464-14206483 | None:intergenic | 35.0% | |
| !!! | TAGGGTTTAAGAGTGTTTTG+TGG | - | chr4_2:14206642-14206661 | Msa0590640:CDS | 35.0% |
| !!! | AGGGTTTAAGAGTGTTTTGT+GGG | - | chr4_2:14206643-14206662 | Msa0590640:CDS | 35.0% |
| ! | GAAACTGTGATTTTCTTGCA+GGG | - | chr4_2:14206850-14206869 | Msa0590640:CDS | 35.0% |
| ! | CAAATTGTGAATTCGGTTTG+TGG | - | chr4_2:14206957-14206976 | Msa0590640:CDS | 35.0% |
| TGGAATCCCAATTAACAACA+TGG | + | chr4_2:14207110-14207129 | None:intergenic | 35.0% | |
| CAACTGTTGGTATTTCATGA+GGG | + | chr4_2:14207148-14207167 | None:intergenic | 35.0% | |
| CTCATGAAATACCAACAGTT+GGG | - | chr4_2:14207147-14207166 | Msa0590640:intron | 35.0% | |
| TCATGAAATACCAACAGTTG+GGG | - | chr4_2:14207148-14207167 | Msa0590640:intron | 35.0% | |
| !! | TGACTAACGTTCTCGTTTTT+AGG | - | chr4_2:14207178-14207197 | Msa0590640:intron | 35.0% |
| !! | GACTAACGTTCTCGTTTTTA+GGG | - | chr4_2:14207179-14207198 | Msa0590640:intron | 35.0% |
| TCTTGTGGCTGATTATGAAA+CGG | - | chr4_2:14207244-14207263 | Msa0590640:CDS | 35.0% | |
| ! | TTTCAAGTATGCCATTCACT+TGG | - | chr4_2:14207281-14207300 | Msa0590640:CDS | 35.0% |
| !!! | CCCTTTTGATTTCAAAGATC+AGG | - | chr4_2:14207330-14207349 | Msa0590640:CDS | 35.0% |
| !! | CCCTGATCTTTGAAATCAAA+AGG | + | chr4_2:14207334-14207353 | None:intergenic | 35.0% |
| AAGTAAGCATCATCCTATCT+GGG | + | chr4_2:14207364-14207383 | None:intergenic | 35.0% | |
| AAAGTAAGCATCATCCTATC+TGG | + | chr4_2:14207365-14207384 | None:intergenic | 35.0% | |
| ACAGACAAAGTAGCATTGTA+GGG | + | chr4_2:14207431-14207450 | None:intergenic | 35.0% | |
| AACAGACAAAGTAGCATTGT+AGG | + | chr4_2:14207432-14207451 | None:intergenic | 35.0% | |
| TGAAAACGCAGATGAATGTA+TGG | - | chr4_2:14207463-14207482 | Msa0590640:CDS | 35.0% | |
| ! | TTGATCTTTTGTGTTGCAGT+TGG | - | chr4_2:14207650-14207669 | Msa0590640:intron | 35.0% |
| ACATGGTTGCTGATATCAAA+TGG | + | chr4_2:14207685-14207704 | None:intergenic | 35.0% | |
| ! | ACAGTTGATTTCACGTTGTT+TGG | + | chr4_2:14208043-14208062 | None:intergenic | 35.0% |
| TTTGTGATATTCCACCAACA+GGG | - | chr4_2:14208062-14208081 | Msa0590640:intron | 35.0% | |
| AGTTGAGTTTCCAATGAATG+TGG | + | chr4_2:14208101-14208120 | None:intergenic | 35.0% | |
| CAATTCAAGAAATGTTCCGA+AGG | - | chr4_2:14208122-14208141 | Msa0590640:intron | 35.0% | |
| AGCAATTTACTGCTATGTTC+AGG | - | chr4_2:14208152-14208171 | Msa0590640:intron | 35.0% | |
| CAACATGAATGATCTTGTGT+CGG | - | chr4_2:14208243-14208262 | Msa0590640:CDS | 35.0% | |
| GTGTTACACATATTCCATCT+AGG | + | chr4_2:14208384-14208403 | None:intergenic | 35.0% | |
| !! | CATAATCTCTTTGTTGTTGG+GGG | - | chr4_2:14208432-14208451 | Msa0590640:CDS | 35.0% |
| ! | GATTGCTGCTTAAAAAGTGT+TGG | + | chr4_2:14208637-14208656 | None:intergenic | 35.0% |
| AGGGAAATTCTTCACATCCA+AGG | - | chr4_2:14206206-14206225 | Msa0590640:three_prime_UTR | 40.0% | |
| GAAATTCTTCACATCCAAGG+TGG | - | chr4_2:14206209-14206228 | Msa0590640:three_prime_UTR | 40.0% | |
| ACAAACCACTTCCCAGAATT+TGG | + | chr4_2:14206258-14206277 | None:intergenic | 40.0% | |
| AGACCGGATAACTTTGTGTT+TGG | - | chr4_2:14206458-14206477 | Msa0590640:CDS | 40.0% | |
| AACTTTGTGTTTGGTCAGAG+TGG | - | chr4_2:14206467-14206486 | Msa0590640:CDS | 40.0% | |
| TGAAAACAGTGATTGCTTGC+AGG | - | chr4_2:14206574-14206593 | Msa0590640:CDS | 40.0% | |
| GAAAACAGTGATTGCTTGCA+GGG | - | chr4_2:14206575-14206594 | Msa0590640:CDS | 40.0% | |
| ! | CATTTTGTGTGCAAAGAAGC+TGG | - | chr4_2:14206828-14206847 | Msa0590640:CDS | 40.0% |
| ! | GGAAACTGTGATTTTCTTGC+AGG | - | chr4_2:14206849-14206868 | Msa0590640:CDS | 40.0% |
| CATACAAACGATACACCCTT+TGG | + | chr4_2:14206929-14206948 | None:intergenic | 40.0% | |
| CCAACTGTTGGTATTTCATG+AGG | + | chr4_2:14207149-14207168 | None:intergenic | 40.0% | |
| CCTCATGAAATACCAACAGT+TGG | - | chr4_2:14207146-14207165 | Msa0590640:intron | 40.0% | |
| CTTGTGGCTGATTATGAAAC+GGG | - | chr4_2:14207245-14207264 | Msa0590640:CDS | 40.0% | |
| GAATGGCATACTTGAAAACC+TGG | + | chr4_2:14207278-14207297 | None:intergenic | 40.0% | |
| TGTCAGAAACCTTTGGTGAA+GGG | + | chr4_2:14207397-14207416 | None:intergenic | 40.0% | |
| TTGATATCAGCAACCATGTC+TGG | - | chr4_2:14207686-14207705 | Msa0590640:intron | 40.0% | |
| ! | TTTGCACCTTTGACTTCAAG+AGG | - | chr4_2:14207812-14207831 | Msa0590640:intron | 40.0% |
| TGAGAACCTCTTGAAGTCAA+AGG | + | chr4_2:14207821-14207840 | None:intergenic | 40.0% | |
| AGAGATCACACAGCAAATGT+GGG | - | chr4_2:14207865-14207884 | Msa0590640:intron | 40.0% | |
| AATCCATTCAACGAAGTAGG+AGG | + | chr4_2:14208020-14208039 | None:intergenic | 40.0% | |
| TGGAATCCATTCAACGAAGT+AGG | + | chr4_2:14208023-14208042 | None:intergenic | 40.0% | |
| GTTTGTGATATTCCACCAAC+AGG | - | chr4_2:14208061-14208080 | Msa0590640:intron | 40.0% | |
| AAGATGGCTTCCACATTCAT+TGG | - | chr4_2:14208088-14208107 | Msa0590640:intron | 40.0% | |
| TAAATTGCTCACTCACCCTT+CGG | + | chr4_2:14208141-14208160 | None:intergenic | 40.0% | |
| TACTGCTATGTTCAGGAGAA+AGG | - | chr4_2:14208159-14208178 | Msa0590640:intron | 40.0% | |
| ATATCAAGATGCTACTGCAG+AGG | - | chr4_2:14208276-14208295 | Msa0590640:CDS | 40.0% | |
| GGATGAGTATGAAGATGAAG+AGG | - | chr4_2:14208300-14208319 | Msa0590640:CDS | 40.0% | |
| TGAGTATGAAGATGAAGAGG+AGG | - | chr4_2:14208303-14208322 | Msa0590640:CDS | 40.0% | |
| TTATCACCAGGAACATGATG+AGG | - | chr4_2:14208327-14208346 | Msa0590640:CDS | 40.0% | |
| ! | TGAGGCTTGTGATCTTTTTG+CGG | - | chr4_2:14208352-14208371 | Msa0590640:CDS | 40.0% |
| ACCAAATCGGAGCCAAATTC+TGG | - | chr4_2:14206243-14206262 | Msa0590640:three_prime_UTR | 45.0% | |
| CCAAATCGGAGCCAAATTCT+GGG | - | chr4_2:14206244-14206263 | Msa0590640:three_prime_UTR | 45.0% | |
| ! | GAAGTGGTTTGTGCTGAACA+TGG | - | chr4_2:14206266-14206285 | Msa0590640:three_prime_UTR | 45.0% |
| GAACATGGAATCGATCCAAC+CGG | - | chr4_2:14206281-14206300 | Msa0590640:three_prime_UTR | 45.0% | |
| CGGTGATTCAGATCTGCAAT+TGG | - | chr4_2:14206313-14206332 | Msa0590640:three_prime_UTR | 45.0% | |
| ! | GGTTCTGATGGATCTTGAAC+CGG | - | chr4_2:14206391-14206410 | Msa0590640:three_prime_UTR | 45.0% |
| ! | GTTCTGATGGATCTTGAACC+GGG | - | chr4_2:14206392-14206411 | Msa0590640:three_prime_UTR | 45.0% |
| GGTCTAAAGATCTGACCGTA+CGG | + | chr4_2:14206443-14206462 | None:intergenic | 45.0% | |
| GTACGGTCAGATCTTTAGAC+CGG | - | chr4_2:14206442-14206461 | Msa0590640:CDS | 45.0% | |
| TCATCATGAACCCCAACTGT+TGG | + | chr4_2:14207161-14207180 | None:intergenic | 45.0% | |
| CAAGTATGCCATTCACTTGG+TGG | - | chr4_2:14207284-14207303 | Msa0590640:CDS | 45.0% | |
| TCAGGGAAGAATACCCAGAT+AGG | - | chr4_2:14207348-14207367 | Msa0590640:CDS | 45.0% | |
| ! | CTCTGTTTTCCCTTCACCAA+AGG | - | chr4_2:14207385-14207404 | Msa0590640:CDS | 45.0% |
| GTGTCAGAAACCTTTGGTGA+AGG | + | chr4_2:14207398-14207417 | None:intergenic | 45.0% | |
| ACCAAAGGTTTCTGACACTG+TGG | - | chr4_2:14207400-14207419 | Msa0590640:CDS | 45.0% | |
| ACCACAGTGTCAGAAACCTT+TGG | + | chr4_2:14207404-14207423 | None:intergenic | 45.0% | |
| ! | CATCTGCGTTTTCAACAAGC+TGG | + | chr4_2:14207457-14207476 | None:intergenic | 45.0% |
| ACAACATGTGACACCAGACA+TGG | + | chr4_2:14207702-14207721 | None:intergenic | 45.0% | |
| !! | CTGGTGTCACATGTTGTTTG+AGG | - | chr4_2:14207705-14207724 | Msa0590640:intron | 45.0% |
| ! | ACATGTTGTTTGAGGTTCCC+TGG | - | chr4_2:14207713-14207732 | Msa0590640:intron | 45.0% |
| GTCAGCTAAACTCCGATCTT+AGG | - | chr4_2:14207735-14207754 | Msa0590640:intron | 45.0% | |
| CACTGCAAGCTTCCTAAGAT+CGG | + | chr4_2:14207750-14207769 | None:intergenic | 45.0% | |
| TAGGAAGCTTGCAGTGAATC+TGG | - | chr4_2:14207754-14207773 | Msa0590640:intron | 45.0% | |
| ACATGAAGAAGTGAAGGCGA+GGG | + | chr4_2:14207787-14207806 | None:intergenic | 45.0% | |
| AACATGAAGAAGTGAAGGCG+AGG | + | chr4_2:14207788-14207807 | None:intergenic | 45.0% | |
| TCGCCTTCACTTCTTCATGT+TGG | - | chr4_2:14207787-14207806 | Msa0590640:intron | 45.0% | |
| CGCCTTCACTTCTTCATGTT+GGG | - | chr4_2:14207788-14207807 | Msa0590640:intron | 45.0% | |
| GCCTTCACTTCTTCATGTTG+GGG | - | chr4_2:14207789-14207808 | Msa0590640:intron | 45.0% | |
| ACCCCAACATGAAGAAGTGA+AGG | + | chr4_2:14207793-14207812 | None:intergenic | 45.0% | |
| AAGAGGTTCTCAGCAGTACA+GGG | - | chr4_2:14207829-14207848 | Msa0590640:intron | 45.0% | |
| !! | CACATTTGCTGTGTGATCTC+TGG | + | chr4_2:14207866-14207885 | None:intergenic | 45.0% |
| CAGAGATCACACAGCAAATG+TGG | - | chr4_2:14207864-14207883 | Msa0590640:intron | 45.0% | |
| ACTCCTCCTACTTCGTTGAA+TGG | - | chr4_2:14208014-14208033 | Msa0590640:intron | 45.0% | |
| GGAGAAAGGCTTTCTTGCAT+TGG | - | chr4_2:14208173-14208192 | Msa0590640:CDS | 45.0% | |
| ! | GCTTTCTTGCATTGGTACAC+TGG | - | chr4_2:14208181-14208200 | Msa0590640:CDS | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+AGG | - | chr4_2:14208187-14208206 | Msa0590640:CDS | 45.0% |
| TTGGTACACTGGTGAAGGAA+TGG | - | chr4_2:14208192-14208211 | Msa0590640:CDS | 45.0% | |
| TGGTGAAGGAATGGATGAGA+TGG | - | chr4_2:14208201-14208220 | Msa0590640:CDS | 45.0% | |
| TGAAGAGGAGGATTATCACC+AGG | - | chr4_2:14208315-14208334 | Msa0590640:CDS | 45.0% | |
| !! | TTTTGCGGTGGATTCCTAGA+TGG | - | chr4_2:14208367-14208386 | Msa0590640:CDS | 45.0% |
| AGAGATTATGAACCGGCAAC+AGG | + | chr4_2:14208422-14208441 | None:intergenic | 45.0% | |
| GTTGGGGGATACTTATGTTC+TGG | - | chr4_2:14208447-14208466 | Msa0590640:CDS | 45.0% | |
| GGCCAATGCGGAAACCAAAT+CGG | - | chr4_2:14206230-14206249 | Msa0590640:three_prime_UTR | 50.0% | |
| !! | CTCCGATTTGGTTTCCGCAT+TGG | + | chr4_2:14206235-14206254 | None:intergenic | 50.0% |
| ! | CCCAGAATTTGGCTCCGATT+TGG | + | chr4_2:14206247-14206266 | None:intergenic | 50.0% |
| TGAATCACCGACGTAACGAC+CGG | + | chr4_2:14206303-14206322 | None:intergenic | 50.0% | |
| TGGAAGATTCGTTCCGAGAG+CGG | - | chr4_2:14206370-14206389 | Msa0590640:three_prime_UTR | 50.0% | |
| AGATCCATCAGAACCGCTCT+CGG | + | chr4_2:14206386-14206405 | None:intergenic | 50.0% | |
| TGTTTGGTCAGAGTGGTGCT+GGG | - | chr4_2:14206474-14206493 | Msa0590640:CDS | 50.0% | |
| ! | AGAGTGGTGCTGGGAATAAC+TGG | - | chr4_2:14206483-14206502 | Msa0590640:CDS | 50.0% |
| ! | GAGTGGTGCTGGGAATAACT+GGG | - | chr4_2:14206484-14206503 | Msa0590640:CDS | 50.0% |
| CTGGGAATAACTGGGCGAAA+GGG | - | chr4_2:14206492-14206511 | Msa0590640:CDS | 50.0% | |
| !! | GCGAAAGGGCATTACACTGA+AGG | - | chr4_2:14206506-14206525 | Msa0590640:CDS | 50.0% |
| TATGAAACGGGTGTGTGTCC+AGG | - | chr4_2:14207257-14207276 | Msa0590640:CDS | 50.0% | |
| ! | GTATGCCATTCACTTGGTGG+AGG | - | chr4_2:14207287-14207306 | Msa0590640:CDS | 50.0% |
| CAGTTCCTCCACCAAGTGAA+TGG | + | chr4_2:14207295-14207314 | None:intergenic | 50.0% | |
| ! | CATTCACTTGGTGGAGGAAC+TGG | - | chr4_2:14207293-14207312 | Msa0590640:CDS | 50.0% |
| TGGAGGAACTGGATCTGGAA+TGG | - | chr4_2:14207304-14207323 | Msa0590640:CDS | 50.0% | |
| ! | GGAGGAACTGGATCTGGAAT+GGG | - | chr4_2:14207305-14207324 | Msa0590640:CDS | 50.0% |
| GATCGGAGTTTAGCTGACCA+GGG | + | chr4_2:14207733-14207752 | None:intergenic | 50.0% | |
| AGATCGGAGTTTAGCTGACC+AGG | + | chr4_2:14207734-14207753 | None:intergenic | 50.0% | |
| AAGAAGTGAAGGCGAGGGAA+TGG | + | chr4_2:14207782-14207801 | None:intergenic | 50.0% | |
| CAAGAGGTTCTCAGCAGTAC+AGG | - | chr4_2:14207828-14207847 | Msa0590640:intron | 50.0% | |
| GGCAGCACACATCATGTTCT+TGG | + | chr4_2:14207894-14207913 | None:intergenic | 50.0% | |
| !! | TGAGGTATCGTCCGTGTCTA+GGG | + | chr4_2:14207919-14207938 | None:intergenic | 50.0% |
| TGAAGATGGCTGATGCAGTG+AGG | + | chr4_2:14207937-14207956 | None:intergenic | 50.0% | |
| ACTGCATCAGCCATCTTCAG+AGG | - | chr4_2:14207938-14207957 | Msa0590640:intron | 50.0% | |
| ! | GCTCATCTTGCCTCTGAAGA+TGG | + | chr4_2:14207951-14207970 | None:intergenic | 50.0% |
| CAGAGGCAAGATGAGCACAA+AGG | - | chr4_2:14207955-14207974 | Msa0590640:intron | 50.0% | |
| TCCACCAACAGGGTTGAAGA+TGG | - | chr4_2:14208072-14208091 | Msa0590640:intron | 50.0% | |
| GAAGCCATCTTCAACCCTGT+TGG | + | chr4_2:14208079-14208098 | None:intergenic | 50.0% | |
| GGATGAGATGGAGTTCACTG+AGG | - | chr4_2:14208213-14208232 | Msa0590640:CDS | 50.0% | |
| TCAAGATGCTACTGCAGAGG+AGG | - | chr4_2:14208279-14208298 | Msa0590640:CDS | 50.0% | |
| CTCAAGCCTCATCATGTTCC+TGG | + | chr4_2:14208336-14208355 | None:intergenic | 50.0% | |
| CAGGAACATGATGAGGCTTG+AGG | - | chr4_2:14208334-14208353 | Msa0590640:CDS | 50.0% | |
| ! | GGCTTGTGATCTTTTTGCGG+TGG | - | chr4_2:14208355-14208374 | Msa0590640:CDS | 50.0% |
| CACATCCAAGGTGGCCAATG+CGG | - | chr4_2:14206218-14206237 | Msa0590640:three_prime_UTR | 55.0% | |
| ! | CGGAGCCAAATTCTGGGAAG+TGG | - | chr4_2:14206250-14206269 | Msa0590640:three_prime_UTR | 55.0% |
| GATCCAACCGGTCGTTACGT+CGG | - | chr4_2:14206293-14206312 | Msa0590640:three_prime_UTR | 55.0% | |
| GGATCTTGAACCGGGAACGA+TGG | - | chr4_2:14206400-14206419 | Msa0590640:exon | 55.0% | |
| CGGACACTATCCATCGTTCC+CGG | + | chr4_2:14206413-14206432 | None:intergenic | 55.0% | |
| CGGGAACGATGGATAGTGTC+CGG | - | chr4_2:14206411-14206430 | Msa0590640:exon | 55.0% | |
| ACGATGGATAGTGTCCGGTC+TGG | - | chr4_2:14206416-14206435 | Msa0590640:CDS | 55.0% | |
| GTGTTTGGTCAGAGTGGTGC+TGG | - | chr4_2:14206473-14206492 | Msa0590640:CDS | 55.0% | |
| GCTGGGAATAACTGGGCGAA+AGG | - | chr4_2:14206491-14206510 | Msa0590640:CDS | 55.0% | |
| CTTGGTGGAGGAACTGGATC+TGG | - | chr4_2:14207299-14207318 | Msa0590640:CDS | 55.0% | |
| GGGTTGTGAGCTTGAGGGTA+CGG | + | chr4_2:14207523-14207542 | None:intergenic | 55.0% | |
| GCTTGGGGTTGTGAGCTTGA+GGG | + | chr4_2:14207528-14207547 | None:intergenic | 55.0% | |
| AGCTTGGGGTTGTGAGCTTG+AGG | + | chr4_2:14207529-14207548 | None:intergenic | 55.0% | |
| ! | GTATCGTCCGTGTCTAGGGT+CGG | + | chr4_2:14207915-14207934 | None:intergenic | 55.0% |
| !! | GTGAGGTATCGTCCGTGTCT+AGG | + | chr4_2:14207920-14207939 | None:intergenic | 55.0% |
| GCCATCTTCAACCCTGTTGG+TGG | + | chr4_2:14208076-14208095 | None:intergenic | 55.0% | |
| ATGCCGCAACTTCCTGTTGC+CGG | - | chr4_2:14208407-14208426 | Msa0590640:CDS | 55.0% | |
| GAACCGGCAACAGGAAGTTG+CGG | + | chr4_2:14208413-14208432 | None:intergenic | 55.0% | |
| ! | GGTTTCCGCATTGGCCACCT+TGG | + | chr4_2:14206226-14206245 | None:intergenic | 60.0% |
| TCACCGACGTAACGACCGGT+TGG | + | chr4_2:14206299-14206318 | None:intergenic | 60.0% | |
| ! | CGTTCCGAGAGCGGTTCTGA+TGG | - | chr4_2:14206379-14206398 | Msa0590640:three_prime_UTR | 60.0% |
| AGTGTCCGGTCTGGACCGTA+CGG | - | chr4_2:14206425-14206444 | Msa0590640:CDS | 60.0% | |
| TCTGACCGTACGGTCCAGAC+CGG | + | chr4_2:14206433-14206452 | None:intergenic | 60.0% | |
| TGTGCTGCCGACCCTAGACA+CGG | - | chr4_2:14207905-14207924 | Msa0590640:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 14206092 | 14208674 | 14206092 | ID=Msa0590640;Name=Msa0590640 |
| chr4_2 | mRNA | 14206092 | 14208674 | 14206092 | ID=Msa0590640-mRNA-1;Parent=Msa0590640;Name=Msa0590640-mRNA-1;_AED=0.25;_eAED=0.25;_QI=111|1|1|1|1|1|3|320|449 |
| chr4_2 | exon | 14206092 | 14207097 | 14206092 | ID=Msa0590640-mRNA-1:exon:4146;Parent=Msa0590640-mRNA-1 |
| chr4_2 | exon | 14207218 | 14207487 | 14207218 | ID=Msa0590640-mRNA-1:exon:4145;Parent=Msa0590640-mRNA-1 |
| chr4_2 | exon | 14208170 | 14208674 | 14208170 | ID=Msa0590640-mRNA-1:exon:4144;Parent=Msa0590640-mRNA-1 |
| chr4_2 | five_prime_UTR | 14208564 | 14208674 | 14208564 | ID=Msa0590640-mRNA-1:five_prime_utr;Parent=Msa0590640-mRNA-1 |
| chr4_2 | CDS | 14208170 | 14208563 | 14208170 | ID=Msa0590640-mRNA-1:cds;Parent=Msa0590640-mRNA-1 |
| chr4_2 | CDS | 14207218 | 14207487 | 14207218 | ID=Msa0590640-mRNA-1:cds;Parent=Msa0590640-mRNA-1 |
| chr4_2 | CDS | 14206412 | 14207097 | 14206412 | ID=Msa0590640-mRNA-1:cds;Parent=Msa0590640-mRNA-1 |
| chr4_2 | three_prime_UTR | 14206092 | 14206411 | 14206092 | ID=Msa0590640-mRNA-1:three_prime_utr;Parent=Msa0590640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
