Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150670 | XP_003623151.1 | 95.183 | 519 | 21 | 3 | 1 | 518 | 1 | 516 | 0.0 | 962 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150670 | sp|Q9LZM8|BLH9_ARATH | 47.791 | 498 | 192 | 16 | 72 | 518 | 95 | 575 | 1.18e-112 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150670 | G7L5K2 | 95.183 | 519 | 21 | 3 | 1 | 518 | 1 | 516 | 0.0 | 962 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1150670 | TF | HB-BELL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1023130 | Msa1150670 | 0.806007 | 1.013996e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150670 | MtrunA17_Chr7g0240371 | 95.183 | 519 | 21 | 3 | 1 | 518 | 1 | 516 | 0.0 | 962 |
| Msa1150670 | MtrunA17_Chr4g0008591 | 49.836 | 608 | 205 | 18 | 2 | 518 | 3 | 601 | 7.57e-167 | 485 |
| Msa1150670 | MtrunA17_Chr4g0028701 | 41.363 | 411 | 168 | 11 | 126 | 468 | 231 | 636 | 3.30e-82 | 268 |
| Msa1150670 | MtrunA17_Chr2g0327021 | 48.421 | 285 | 107 | 7 | 127 | 379 | 235 | 511 | 3.04e-76 | 251 |
| Msa1150670 | MtrunA17_Chr8g0387321 | 35.763 | 439 | 214 | 12 | 140 | 515 | 185 | 618 | 2.29e-63 | 218 |
| Msa1150670 | MtrunA17_Chr1g0155681 | 40.523 | 306 | 147 | 6 | 144 | 426 | 174 | 467 | 4.36e-62 | 214 |
| Msa1150670 | MtrunA17_Chr8g0373801 | 41.722 | 302 | 146 | 8 | 121 | 394 | 364 | 663 | 1.82e-61 | 216 |
| Msa1150670 | MtrunA17_Chr5g0403251 | 42.105 | 285 | 136 | 8 | 136 | 394 | 330 | 611 | 1.31e-60 | 212 |
| Msa1150670 | MtrunA17_Chr4g0025521 | 43.772 | 281 | 120 | 7 | 140 | 394 | 217 | 485 | 1.60e-60 | 211 |
| Msa1150670 | MtrunA17_Chr3g0141941 | 41.288 | 264 | 127 | 6 | 136 | 377 | 158 | 415 | 7.01e-60 | 206 |
| Msa1150670 | MtrunA17_Chr3g0141931 | 42.379 | 269 | 131 | 6 | 137 | 385 | 162 | 426 | 9.01e-60 | 203 |
| Msa1150670 | MtrunA17_Chr7g0267481 | 53.571 | 196 | 81 | 4 | 202 | 391 | 250 | 441 | 2.22e-58 | 205 |
| Msa1150670 | MtrunA17_Chr1g0177751 | 45.548 | 292 | 128 | 8 | 139 | 408 | 160 | 442 | 5.55e-58 | 203 |
| Msa1150670 | MtrunA17_Chr1g0151681 | 33.333 | 282 | 166 | 7 | 137 | 399 | 240 | 518 | 3.53e-38 | 146 |
| Msa1150670 | MtrunA17_Chr5g0398181 | 39.773 | 88 | 48 | 2 | 298 | 380 | 203 | 290 | 2.50e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150670 | AT5G02030.1 | 47.791 | 498 | 192 | 16 | 72 | 518 | 95 | 575 | 1.20e-113 | 348 |
| Msa1150670 | AT2G27990.1 | 51.190 | 252 | 114 | 4 | 130 | 379 | 252 | 496 | 9.72e-76 | 250 |
| Msa1150670 | AT1G19700.1 | 44.853 | 272 | 109 | 6 | 136 | 377 | 161 | 421 | 1.75e-66 | 224 |
| Msa1150670 | AT1G19700.3 | 44.853 | 272 | 109 | 6 | 136 | 377 | 161 | 421 | 1.75e-66 | 224 |
| Msa1150670 | AT1G19700.5 | 44.853 | 272 | 109 | 6 | 136 | 377 | 161 | 421 | 1.75e-66 | 224 |
| Msa1150670 | AT1G19700.4 | 44.853 | 272 | 109 | 6 | 136 | 377 | 161 | 421 | 1.75e-66 | 224 |
| Msa1150670 | AT1G19700.2 | 44.853 | 272 | 109 | 6 | 136 | 377 | 161 | 421 | 1.75e-66 | 224 |
| Msa1150670 | AT2G16400.1 | 37.750 | 400 | 209 | 11 | 134 | 518 | 108 | 482 | 4.16e-66 | 222 |
| Msa1150670 | AT1G75410.1 | 45.660 | 265 | 112 | 8 | 135 | 377 | 162 | 416 | 9.82e-66 | 222 |
| Msa1150670 | AT1G75410.2 | 45.660 | 265 | 112 | 8 | 135 | 377 | 162 | 416 | 9.82e-66 | 222 |
| Msa1150670 | AT4G34610.2 | 38.611 | 360 | 169 | 11 | 140 | 467 | 140 | 479 | 1.66e-61 | 211 |
| Msa1150670 | AT4G34610.4 | 38.611 | 360 | 169 | 11 | 140 | 467 | 140 | 479 | 1.66e-61 | 211 |
| Msa1150670 | AT4G34610.3 | 38.611 | 360 | 169 | 11 | 140 | 467 | 140 | 479 | 1.66e-61 | 211 |
| Msa1150670 | AT4G34610.1 | 38.611 | 360 | 169 | 11 | 140 | 467 | 140 | 479 | 1.66e-61 | 211 |
| Msa1150670 | AT2G27220.1 | 40.809 | 272 | 132 | 6 | 146 | 408 | 82 | 333 | 1.40e-57 | 197 |
| Msa1150670 | AT2G27220.3 | 40.809 | 272 | 132 | 6 | 146 | 408 | 82 | 333 | 1.40e-57 | 197 |
| Msa1150670 | AT5G41410.1 | 35.520 | 442 | 196 | 18 | 141 | 517 | 194 | 611 | 1.62e-57 | 202 |
| Msa1150670 | AT4G36870.2 | 42.636 | 258 | 121 | 5 | 140 | 374 | 312 | 565 | 1.50e-56 | 201 |
| Msa1150670 | AT4G36870.1 | 42.636 | 258 | 121 | 5 | 140 | 374 | 312 | 565 | 1.50e-56 | 201 |
| Msa1150670 | AT2G23760.2 | 35.751 | 386 | 181 | 10 | 140 | 468 | 237 | 612 | 2.32e-55 | 196 |
| Msa1150670 | AT2G23760.1 | 35.751 | 386 | 181 | 10 | 140 | 468 | 237 | 612 | 2.32e-55 | 196 |
| Msa1150670 | AT2G23760.3 | 35.751 | 386 | 181 | 10 | 140 | 468 | 237 | 612 | 2.32e-55 | 196 |
| Msa1150670 | AT2G35940.3 | 44.061 | 261 | 109 | 5 | 141 | 368 | 190 | 446 | 1.12e-54 | 195 |
| Msa1150670 | AT2G35940.1 | 44.061 | 261 | 109 | 5 | 141 | 368 | 190 | 446 | 1.12e-54 | 195 |
| Msa1150670 | AT2G35940.2 | 44.061 | 261 | 109 | 5 | 141 | 368 | 190 | 446 | 1.12e-54 | 195 |
| Msa1150670 | AT2G27220.2 | 39.085 | 284 | 138 | 6 | 146 | 408 | 82 | 351 | 5.69e-54 | 189 |
| Msa1150670 | AT1G75410.3 | 42.975 | 242 | 106 | 8 | 135 | 354 | 162 | 393 | 1.63e-51 | 181 |
| Msa1150670 | AT1G75430.1 | 37.591 | 274 | 140 | 6 | 141 | 389 | 17 | 284 | 2.25e-51 | 177 |
| Msa1150670 | AT2G23760.4 | 31.448 | 442 | 176 | 12 | 140 | 468 | 237 | 664 | 2.74e-46 | 172 |
| Msa1150670 | AT2G27990.2 | 43.204 | 206 | 108 | 4 | 130 | 333 | 252 | 450 | 1.82e-44 | 163 |
| Msa1150670 | AT4G36870.4 | 38.912 | 239 | 119 | 5 | 140 | 355 | 312 | 546 | 8.42e-43 | 160 |
| Msa1150670 | AT4G36870.3 | 38.397 | 237 | 119 | 5 | 140 | 353 | 312 | 544 | 1.37e-41 | 157 |
| Msa1150670 | AT4G32980.1 | 30.693 | 303 | 170 | 8 | 95 | 374 | 154 | 439 | 3.57e-37 | 143 |
| Msa1150670 | AT4G32980.2 | 30.693 | 303 | 170 | 8 | 95 | 374 | 154 | 439 | 3.57e-37 | 143 |
| Msa1150670 | AT1G75430.2 | 30.734 | 218 | 120 | 6 | 141 | 333 | 17 | 228 | 7.78e-24 | 102 |
| Msa1150670 | AT1G62990.1 | 43.478 | 69 | 37 | 1 | 300 | 366 | 207 | 275 | 2.72e-11 | 65.1 |
| Msa1150670 | AT1G23380.2 | 50.909 | 55 | 27 | 0 | 314 | 368 | 255 | 309 | 4.34e-11 | 64.7 |
| Msa1150670 | AT1G23380.1 | 50.909 | 55 | 27 | 0 | 314 | 368 | 253 | 307 | 4.65e-11 | 64.7 |
Find 122 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGATCTTATACGTAAAT+TGG | 0.128783 | 7_4:+34439475 | None:intergenic |
| GAAACCTGCACAACAATTAT+TGG | 0.152856 | 7_4:-34438875 | Msa1150670:CDS |
| CAATTGCAGAATAGGCAATT+TGG | 0.234987 | 7_4:-34435352 | Msa1150670:CDS |
| CTTCATCAAAATCATGGAAT+TGG | 0.260611 | 7_4:-34435457 | Msa1150670:CDS |
| CAACTACTAACCATGTTTCT+TGG | 0.271703 | 7_4:-34435262 | Msa1150670:three_prime_UTR |
| CGCTGCTCCGTATGCAAGTT+TGG | 0.271943 | 7_4:-34436786 | Msa1150670:CDS |
| TCATAATCACAAGATAAATT+AGG | 0.276291 | 7_4:-34435236 | Msa1150670:three_prime_UTR |
| CTGTTGTTGATCATGTTTCT+AGG | 0.276539 | 7_4:-34438960 | Msa1150670:CDS |
| ATTGAAATTTGATTCTAGTT+TGG | 0.276820 | 7_4:-34435209 | Msa1150670:three_prime_UTR |
| TTGAAATTTGATTCTAGTTT+GGG | 0.301180 | 7_4:-34435208 | Msa1150670:three_prime_UTR |
| TCATCTCTCTGTGATTCCTT+TGG | 0.313062 | 7_4:+34435697 | None:intergenic |
| ACCGACCAGATTCAGTTTAT+CGG | 0.323110 | 7_4:-34436716 | Msa1150670:CDS |
| TCTAGGAACACGGTTCCATT+AGG | 0.325865 | 7_4:-34438943 | Msa1150670:CDS |
| GAAGGTAAAGGTGAATAGTT+AGG | 0.327476 | 7_4:+34439198 | None:intergenic |
| CAGCAGCACTCATCTGATTC+TGG | 0.330179 | 7_4:+34439001 | None:intergenic |
| GTTCCATTAGGGCCATTTAC+AGG | 0.333535 | 7_4:-34438931 | Msa1150670:CDS |
| AGCGTGCTGTCAGTGTTCTT+AGG | 0.337275 | 7_4:-34436553 | Msa1150670:CDS |
| TCAATCATGAACAGGTTTGC+AGG | 0.342817 | 7_4:-34436880 | Msa1150670:intron |
| AAGATTCAATGAAACTTGTT+TGG | 0.343303 | 7_4:+34439235 | None:intergenic |
| ACTTCATTTGAATATGTTGC+TGG | 0.344803 | 7_4:-34436818 | Msa1150670:CDS |
| ACAGAAGCATAACCTGTAAA+TGG | 0.347909 | 7_4:+34438919 | None:intergenic |
| AATTGCAGAATAGGCAATTT+GGG | 0.349127 | 7_4:-34435351 | Msa1150670:CDS |
| GATGATAAAGATAAAGATAA+AGG | 0.358607 | 7_4:+34439036 | None:intergenic |
| GCGTGCTGTCAGTGTTCTTA+GGG | 0.364568 | 7_4:-34436552 | Msa1150670:CDS |
| ATGTGTTACAGGTGTCTAAT+TGG | 0.376653 | 7_4:-34435792 | Msa1150670:intron |
| GTTAGTAGTTGCTTAGTTAG+TGG | 0.379746 | 7_4:+34435274 | None:intergenic |
| TAACCTGTAAATGGCCCTAA+TGG | 0.383820 | 7_4:+34438928 | None:intergenic |
| GGTAACAGTGGAATGATTAA+TGG | 0.384759 | 7_4:-34438775 | Msa1150670:CDS |
| TGCCGTTGATGCATCTTTGA+TGG | 0.387842 | 7_4:-34438809 | Msa1150670:CDS |
| TTTCTCTTCTGCTTTGTTGT+GGG | 0.388583 | 7_4:+34439280 | None:intergenic |
| AACTACTAACCATGTTTCTT+GGG | 0.391182 | 7_4:-34435261 | Msa1150670:three_prime_UTR |
| GATGATCTTATACGTAAATT+GGG | 0.393261 | 7_4:+34439476 | None:intergenic |
| TTTGAGTTTGATAAAGAAAA+GGG | 0.396823 | 7_4:+34439127 | None:intergenic |
| TAAATGCAAGAGTAAGGCTT+TGG | 0.400143 | 7_4:-34435765 | Msa1150670:CDS |
| AAAATCAATAATAAAGAATA+GGG | 0.402142 | 7_4:+34439358 | None:intergenic |
| CCTCTTTGAGGTCGCCAAAC+AGG | 0.409862 | 7_4:+34436584 | None:intergenic |
| TTCATCAAAATCATGGAATT+GGG | 0.411246 | 7_4:-34435456 | Msa1150670:CDS |
| TTTGAATATGTTGCTGGCCT+CGG | 0.413259 | 7_4:-34436812 | Msa1150670:CDS |
| CTAGGAACACGGTTCCATTA+GGG | 0.419262 | 7_4:-34438942 | Msa1150670:CDS |
| GGTTTATAAATGCAAGAGTA+AGG | 0.420041 | 7_4:-34435771 | Msa1150670:CDS |
| TCATCCAATAATTGTTGTGC+AGG | 0.423901 | 7_4:+34438871 | None:intergenic |
| ACTTACCGATAAACTGAATC+TGG | 0.425112 | 7_4:+34436711 | None:intergenic |
| TTTAGCCAACATTAGCTTGT+CGG | 0.425479 | 7_4:+34435923 | None:intergenic |
| ATTTGAGTTTGATAAAGAAA+AGG | 0.427297 | 7_4:+34439126 | None:intergenic |
| AGGTGAATAGTTAGGGTTAA+GGG | 0.439612 | 7_4:+34439206 | None:intergenic |
| GATTCTAGTTTGGGATTAAG+TGG | 0.440527 | 7_4:-34435199 | Msa1150670:three_prime_UTR |
| AACACGTCCAACAACCTGTT+TGG | 0.443229 | 7_4:-34436598 | Msa1150670:CDS |
| GCCCCTTACAGTCAATGGCC+GGG | 0.445987 | 7_4:-34436629 | Msa1150670:CDS |
| TTGCTTGCTATACTATGATT+CGG | 0.446410 | 7_4:+34435556 | None:intergenic |
| CTAATGTTGGCTAAACAAAC+TGG | 0.446507 | 7_4:-34435915 | Msa1150670:CDS |
| AAGGTGAATAGTTAGGGTTA+AGG | 0.455170 | 7_4:+34439205 | None:intergenic |
| CTCGGTCTTCATCAAAATCA+TGG | 0.458609 | 7_4:-34435463 | Msa1150670:CDS |
| CGCTCGGGGAGCCCTCTTTG+AGG | 0.461546 | 7_4:+34436572 | None:intergenic |
| AACCCCGGCCATTGACTGTA+AGG | 0.466601 | 7_4:+34436626 | None:intergenic |
| AATCAACAAGTTGGTAATGT+TGG | 0.479434 | 7_4:-34435535 | Msa1150670:CDS |
| GTTTAGTACTATGGCTGATG+AGG | 0.481895 | 7_4:-34439325 | Msa1150670:exon |
| AGCCCCTTACAGTCAATGGC+CGG | 0.485718 | 7_4:-34436630 | Msa1150670:CDS |
| AAGGTAAAGGTGAATAGTTA+GGG | 0.487879 | 7_4:+34439199 | None:intergenic |
| ATGGAGCCCCTTACAGTCAA+TGG | 0.496798 | 7_4:-34436634 | Msa1150670:CDS |
| GATAGTGAAATGAAAAGATA+TGG | 0.499077 | 7_4:+34439437 | None:intergenic |
| AGAACACTGACAGCACGCTC+GGG | 0.500223 | 7_4:+34436557 | None:intergenic |
| AAAGAGAGTGATGGAAGTGA+CGG | 0.501058 | 7_4:+34439401 | None:intergenic |
| TTTAGTACTATGGCTGATGA+GGG | 0.503174 | 7_4:-34439324 | Msa1150670:exon |
| TTACTGTTTATAGCATCTAA+AGG | 0.509725 | 7_4:+34439150 | None:intergenic |
| GAGGTCGCCAAACAGGTTGT+TGG | 0.511201 | 7_4:+34436591 | None:intergenic |
| GATGATACACTTGGTGATGA+TGG | 0.511653 | 7_4:-34438745 | Msa1150670:CDS |
| ATGTGTATTTCCTCCACCAT+TGG | 0.521327 | 7_4:+34435739 | None:intergenic |
| CCATCGCCATTGTGAAACCT+TGG | 0.533113 | 7_4:+34436653 | None:intergenic |
| AAGAACACTGACAGCACGCT+CGG | 0.533120 | 7_4:+34436556 | None:intergenic |
| ATTAGCTTGTCGGTATCAGT+AGG | 0.537414 | 7_4:+34435933 | None:intergenic |
| TTATCAGATAAGCAATAGAA+AGG | 0.539123 | 7_4:-34436684 | Msa1150670:CDS |
| CTGTCAGTGTTCTTAGGGGA+TGG | 0.544619 | 7_4:-34436547 | Msa1150670:CDS |
| GGAGTGAGCATGATGAATAA+TGG | 0.547619 | 7_4:-34435514 | Msa1150670:CDS |
| AACTTGTCTGTGGAGGTAGA+TGG | 0.550200 | 7_4:+34435631 | None:intergenic |
| TTATTACTGCATGAATCTGC+TGG | 0.550815 | 7_4:+34436840 | None:intergenic |
| TGCGCGGCACTCATGTTGAA+AGG | 0.555710 | 7_4:+34435424 | None:intergenic |
| CCAAGGTTTCACAATGGCGA+TGG | 0.556719 | 7_4:-34436653 | Msa1150670:CDS |
| AGAAAAGAGAAAGAGAGTGA+TGG | 0.561774 | 7_4:+34439392 | None:intergenic |
| AGTGAAGGATCGTAAAGAGA+AGG | 0.562891 | 7_4:+34439180 | None:intergenic |
| CCCCGGCCATTGACTGTAAG+GGG | 0.567814 | 7_4:+34436628 | None:intergenic |
| GGCACTCATGTTGAAAGGCT+CGG | 0.569858 | 7_4:+34435429 | None:intergenic |
| GGATCGTAAAGAGAAGGTAA+AGG | 0.570346 | 7_4:+34439186 | None:intergenic |
| TTGGATGAGATATGTGATGT+TGG | 0.571767 | 7_4:-34438856 | Msa1150670:CDS |
| TTTATAGCCAAACTTGCATA+CGG | 0.572894 | 7_4:+34436779 | None:intergenic |
| AACTGGTCTATCTCGTAACC+AGG | 0.577110 | 7_4:-34435898 | Msa1150670:intron |
| TCTTTGATGGAAACTAATCA+TGG | 0.579826 | 7_4:-34438796 | Msa1150670:CDS |
| ATAGCAAGCAATCAACAAGT+TGG | 0.581336 | 7_4:-34435544 | Msa1150670:CDS |
| GCTTTGGAAGCCAATGGTGG+AGG | 0.582607 | 7_4:-34435749 | Msa1150670:CDS |
| ACCCCGGCCATTGACTGTAA+GGG | 0.583644 | 7_4:+34436627 | None:intergenic |
| TGATACCGACAAGCTAATGT+TGG | 0.589026 | 7_4:-34435928 | Msa1150670:CDS |
| TGAATAGTTAGGGTTAAGGG+TGG | 0.589670 | 7_4:+34439209 | None:intergenic |
| TTCCATCAAAGATGCATCAA+CGG | 0.593348 | 7_4:+34438807 | None:intergenic |
| CTGTTTGGCGACCTCAAAGA+GGG | 0.600827 | 7_4:-34436583 | Msa1150670:CDS |
| GAAACTAATCATGGTAACAG+TGG | 0.611291 | 7_4:-34438787 | Msa1150670:CDS |
| CGTGCTGTCAGTGTTCTTAG+GGG | 0.616281 | 7_4:-34436551 | Msa1150670:CDS |
| AATAATGGTGCAACAAGCAA+TGG | 0.619469 | 7_4:-34435499 | Msa1150670:CDS |
| ATTATGAAACCCAAGAAACA+TGG | 0.619967 | 7_4:+34435252 | None:intergenic |
| ACCGATAAACTGAATCTGGT+CGG | 0.620017 | 7_4:+34436715 | None:intergenic |
| AGTAAGGCTTTGGAAGCCAA+TGG | 0.623632 | 7_4:-34435755 | Msa1150670:CDS |
| TGATCATGTTTCTAGGAACA+CGG | 0.625288 | 7_4:-34438953 | Msa1150670:CDS |
| CCTGTTTGGCGACCTCAAAG+AGG | 0.626862 | 7_4:-34436584 | Msa1150670:CDS |
| AATGGTGTATCTCTGACGCT+CGG | 0.628944 | 7_4:-34435481 | Msa1150670:CDS |
| TGAATCACAGCAATCTCCAA+AGG | 0.631385 | 7_4:-34435713 | Msa1150670:CDS |
| GAACACTGACAGCACGCTCG+GGG | 0.631474 | 7_4:+34436558 | None:intergenic |
| ATTGTTAACAGTGCTTGATG+AGG | 0.636658 | 7_4:-34438704 | Msa1150670:intron |
| TCTAAAGGTGAAATGAGTGA+AGG | 0.639475 | 7_4:+34439165 | None:intergenic |
| TGGACGTGTTCTATAAACCC+CGG | 0.639880 | 7_4:+34436611 | None:intergenic |
| ATACACTTGGTGATGATGGA+AGG | 0.640811 | 7_4:-34438741 | Msa1150670:CDS |
| AAGGCTTTGGAAGCCAATGG+TGG | 0.647272 | 7_4:-34435752 | Msa1150670:CDS |
| ATAGAAAGGATGCATCTCCA+AGG | 0.647361 | 7_4:-34436670 | Msa1150670:CDS |
| GAATCTAAAATGTTTAGACA+TGG | 0.648388 | 7_4:+34436754 | None:intergenic |
| ATGAATCATGTATACAACGA+TGG | 0.656023 | 7_4:-34439105 | Msa1150670:CDS |
| ATCGTGAAACTTGTCTGTGG+AGG | 0.656497 | 7_4:+34435624 | None:intergenic |
| CATACGGAGCAGCGTTACCG+AGG | 0.661288 | 7_4:+34436795 | None:intergenic |
| TGCTAGACCAAAACGCTGCG+CGG | 0.661483 | 7_4:+34435408 | None:intergenic |
| TTAGCTTGTCGGTATCAGTA+GGG | 0.677537 | 7_4:+34435934 | None:intergenic |
| CTGCAATTGAAAACCACTCG+CGG | 0.686077 | 7_4:+34435366 | None:intergenic |
| AATCATGTATACAACGATGG+TGG | 0.691205 | 7_4:-34439102 | Msa1150670:CDS |
| ATCATGAACAGGTTTGCAGG+AGG | 0.698719 | 7_4:-34436877 | Msa1150670:intron |
| GGTGTTGATGATGATACACT+TGG | 0.700349 | 7_4:-34438754 | Msa1150670:CDS |
| GCATCTCCAAGGTTTCACAA+TGG | 0.730768 | 7_4:-34436659 | Msa1150670:CDS |
| AACATCGTGAAACTTGTCTG+TGG | 0.748355 | 7_4:+34435621 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAATAATAAAGAATA+GGG | + | chr7_4:34435273-34435292 | None:intergenic | 10.0% |
| !! | AAAAATCAATAATAAAGAAT+AGG | + | chr7_4:34435274-34435293 | None:intergenic | 10.0% |
| !! | AGAAAAAACAATATAATAAT+TGG | - | chr7_4:34436088-34436107 | Msa1150670:intron | 10.0% |
| !! | TGTTAAAAAAAAAAAAACAA+TGG | - | chr7_4:34436887-34436906 | Msa1150670:intron | 10.0% |
| !!! | GTTTATATAAGTATTGTTTT+AGG | + | chr7_4:34436421-34436440 | None:intergenic | 15.0% |
| !! | AATGAAATTAAAAACATTGT+TGG | - | chr7_4:34436648-34436667 | Msa1150670:CDS | 15.0% |
| !! | AAAAAACATTAAAACTCATT+TGG | - | chr7_4:34436736-34436755 | Msa1150670:CDS | 15.0% |
| !! | TCACTTTAATAAAATACAAA+TGG | + | chr7_4:34437104-34437123 | None:intergenic | 15.0% |
| !!! | ATTTTATTAAAGTGATTGAT+TGG | - | chr7_4:34437109-34437128 | Msa1150670:intron | 15.0% |
| !!! | CAAAAAAACTTTTTTTTTGA+AGG | + | chr7_4:34437240-34437259 | None:intergenic | 15.0% |
| !!! | TTTGAGTTTGATAAAGAAAA+GGG | + | chr7_4:34435504-34435523 | None:intergenic | 20.0% |
| !!! | ATTTGAGTTTGATAAAGAAA+AGG | + | chr7_4:34435505-34435524 | None:intergenic | 20.0% |
| !! | GATGATAAAGATAAAGATAA+AGG | + | chr7_4:34435595-34435614 | None:intergenic | 20.0% |
| !! | TATGTATGTATGTATGAATA+GGG | + | chr7_4:34436117-34436136 | None:intergenic | 20.0% |
| !! | TATTCATACATACATACATA+CGG | - | chr7_4:34436117-34436136 | Msa1150670:intron | 20.0% |
| !! | GCTCTCAAAAAAAAATTATA+TGG | + | chr7_4:34436195-34436214 | None:intergenic | 20.0% |
| !!! | AGCATAATCCATATAATTTT+TGG | - | chr7_4:34436212-34436231 | Msa1150670:intron | 20.0% |
| !! | TAGCATAACCAAAAATTATA+TGG | + | chr7_4:34436223-34436242 | None:intergenic | 20.0% |
| !!! | TTGGTTATGCTATTTTTTTA+TGG | - | chr7_4:34436231-34436250 | Msa1150670:intron | 20.0% |
| !!! | CGAATCATTTTTTTAATCAA+CGG | - | chr7_4:34436306-34436325 | Msa1150670:intron | 20.0% |
| !! | AGACAAAAAGTAATCATATT+AGG | + | chr7_4:34436577-34436596 | None:intergenic | 20.0% |
| !!! | TAAATCAAAACACACTTTTT+TGG | + | chr7_4:34437163-34437182 | None:intergenic | 20.0% |
| !! | TGAAACAATATATATTCTAC+CGG | + | chr7_4:34437525-34437544 | None:intergenic | 20.0% |
| !! | AAGCGTTTAAAAAGAATATT+TGG | + | chr7_4:34438419-34438438 | None:intergenic | 20.0% |
| !! | TATAGATGATCATAGAAAAA+GGG | + | chr7_4:34438472-34438491 | None:intergenic | 20.0% |
| !! | TTATAGATGATCATAGAAAA+AGG | + | chr7_4:34438473-34438492 | None:intergenic | 20.0% |
| !! | TAAAATAGTTGAAATAGCAA+CGG | - | chr7_4:34438490-34438509 | Msa1150670:intron | 20.0% |
| !! | TTAATCATGAAAAATTTACC+TGG | + | chr7_4:34438751-34438770 | None:intergenic | 20.0% |
| !! | TCATAATCACAAGATAAATT+AGG | - | chr7_4:34439392-34439411 | Msa1150670:five_prime_UTR | 20.0% |
| !!! | ATTGAAATTTGATTCTAGTT+TGG | - | chr7_4:34439419-34439438 | Msa1150670:five_prime_UTR | 20.0% |
| !!! | TTGAAATTTGATTCTAGTTT+GGG | - | chr7_4:34439420-34439439 | Msa1150670:five_prime_UTR | 20.0% |
| ! | GATAGTGAAATGAAAAGATA+TGG | + | chr7_4:34435194-34435213 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTGTTTAGTACTA+TGG | - | chr7_4:34435294-34435313 | Msa1150670:exon | 25.0% |
| !! | AAGATTCAATGAAACTTGTT+TGG | + | chr7_4:34435396-34435415 | None:intergenic | 25.0% |
| ! | TTACTGTTTATAGCATCTAA+AGG | + | chr7_4:34435481-34435500 | None:intergenic | 25.0% |
| ! | GTATGTATGTATGTATGAAT+AGG | + | chr7_4:34436118-34436137 | None:intergenic | 25.0% |
| ! | ATTCATACATACATACATAC+GGG | - | chr7_4:34436118-34436137 | Msa1150670:intron | 25.0% |
| !!! | CAAATCAATACGGTTTTTTA+CGG | + | chr7_4:34436278-34436297 | None:intergenic | 25.0% |
| ! | CGAATAGATTCAAATCAATA+CGG | + | chr7_4:34436288-34436307 | None:intergenic | 25.0% |
| ! | GTTGTATTTATGTGACTATA+TGG | - | chr7_4:34436943-34436962 | Msa1150670:intron | 25.0% |
| ! | AAACTTATCCCATAGTATAT+CGG | + | chr7_4:34436982-34437001 | None:intergenic | 25.0% |
| ! | CTCATCAATACTTTACAAAA+AGG | + | chr7_4:34437019-34437038 | None:intergenic | 25.0% |
| !!! | TTTGTAAAGTATTGATGAGA+AGG | - | chr7_4:34437020-34437039 | Msa1150670:intron | 25.0% |
| !! | TGGTATAAAATCTTTGCTAT+GGG | + | chr7_4:34437084-34437103 | None:intergenic | 25.0% |
| ! | ATGGTATAAAATCTTTGCTA+TGG | + | chr7_4:34437085-34437104 | None:intergenic | 25.0% |
| ! | TATTAAAGTGATTGATTGGT+AGG | - | chr7_4:34437113-34437132 | Msa1150670:intron | 25.0% |
| !!! | GTTTTTTTGCCTAAAAAGAT+TGG | - | chr7_4:34437251-34437270 | Msa1150670:intron | 25.0% |
| !! | TTTCAGAAACCAATCTTTTT+AGG | + | chr7_4:34437263-34437282 | None:intergenic | 25.0% |
| !!! | AAGATTGGTTTCTGAAATTT+TGG | - | chr7_4:34437266-34437285 | Msa1150670:intron | 25.0% |
| ! | ATAGAATCAGAATATGCAAA+TGG | - | chr7_4:34437324-34437343 | Msa1150670:intron | 25.0% |
| ! | AATGTCCAATCTCAAAATAT+CGG | - | chr7_4:34437385-34437404 | Msa1150670:intron | 25.0% |
| !!! | TATTTTGAGATCTTACGAAT+CGG | + | chr7_4:34437448-34437467 | None:intergenic | 25.0% |
| ! | TTGTTTCACTGTAATTTATC+CGG | - | chr7_4:34437537-34437556 | Msa1150670:intron | 25.0% |
| ! | AATTTCATCTTGCATCAAAT+TGG | + | chr7_4:34437575-34437594 | None:intergenic | 25.0% |
| ! | AATTTGATGCAAGATGAAAT+TGG | - | chr7_4:34437574-34437593 | Msa1150670:intron | 25.0% |
| ! | ATTGATATTGTGTAGTTTGA+GGG | - | chr7_4:34437604-34437623 | Msa1150670:intron | 25.0% |
| !! | GAATCTAAAATGTTTAGACA+TGG | + | chr7_4:34437877-34437896 | None:intergenic | 25.0% |
| ! | TTATCAGATAAGCAATAGAA+AGG | - | chr7_4:34437944-34437963 | Msa1150670:intron | 25.0% |
| ! | AGATTGAAATAACACACTTA+CGG | + | chr7_4:34438128-34438147 | None:intergenic | 25.0% |
| ! | AATCACAAGTGATTGAATAT+TGG | - | chr7_4:34438200-34438219 | Msa1150670:intron | 25.0% |
| !! | CATACTGAAAGCATATAATT+TGG | + | chr7_4:34438246-34438265 | None:intergenic | 25.0% |
| ! | ATTATATGCTTTCAGTATGA+AGG | - | chr7_4:34438247-34438266 | Msa1150670:intron | 25.0% |
| ! | AAAATAGTTGAAATAGCAAC+GGG | - | chr7_4:34438491-34438510 | Msa1150670:intron | 25.0% |
| ! | ATATATATAGTGACCGAATT+TGG | + | chr7_4:34438524-34438543 | None:intergenic | 25.0% |
| ! | GGGATGGAAAAATATAAAAT+CGG | + | chr7_4:34438572-34438591 | None:intergenic | 25.0% |
| ! | TTCTAGTAGTGATATGTATA+TGG | - | chr7_4:34438606-34438625 | Msa1150670:intron | 25.0% |
| ! | TAAACACATGTCTTGTAAAA+TGG | + | chr7_4:34438641-34438660 | None:intergenic | 25.0% |
| ! | TTCATCAAAATCATGGAATT+GGG | - | chr7_4:34439172-34439191 | Msa1150670:CDS | 25.0% |
| !! | CATTCTTTTTATCTTAGTAG+TGG | - | chr7_4:34439459-34439478 | Msa1150670:five_prime_UTR | 25.0% |
| AAGGTAAAGGTGAATAGTTA+GGG | + | chr7_4:34435432-34435451 | None:intergenic | 30.0% | |
| ATGAATCATGTATACAACGA+TGG | - | chr7_4:34435523-34435542 | Msa1150670:CDS | 30.0% | |
| TCTTTGATGGAAACTAATCA+TGG | - | chr7_4:34435832-34435851 | Msa1150670:intron | 30.0% | |
| !!! | AATACGGTTTTTTACGGTTT+TGG | + | chr7_4:34436272-34436291 | None:intergenic | 30.0% |
| !! | CATTCTCTAAAAGTTCTAAG+TGG | + | chr7_4:34436526-34436545 | None:intergenic | 30.0% |
| TAGATAACTCCATTGAACTA+AGG | + | chr7_4:34436766-34436785 | None:intergenic | 30.0% | |
| TTCAATGGAGTTATCTACTT+GGG | - | chr7_4:34436769-34436788 | Msa1150670:CDS | 30.0% | |
| GGACATGACATTAATAACAA+TGG | - | chr7_4:34436790-34436809 | Msa1150670:CDS | 30.0% | |
| ! | CTCTTTTTGTGGATAGATTT+TGG | - | chr7_4:34436915-34436934 | Msa1150670:intron | 30.0% |
| ! | ACTTTTTACCCGATATACTA+TGG | - | chr7_4:34436970-34436989 | Msa1150670:intron | 30.0% |
| ! | CTTTTTACCCGATATACTAT+GGG | - | chr7_4:34436971-34436990 | Msa1150670:intron | 30.0% |
| AACTTATCCCATAGTATATC+GGG | + | chr7_4:34436981-34437000 | None:intergenic | 30.0% | |
| AAGGAATATATGCTGAAGAA+TGG | - | chr7_4:34437039-34437058 | Msa1150670:intron | 30.0% | |
| AGGAATATATGCTGAAGAAT+GGG | - | chr7_4:34437040-34437059 | Msa1150670:intron | 30.0% | |
| ! | GGAGCAAAAATCTTTTCTAA+AGG | + | chr7_4:34437142-34437161 | None:intergenic | 30.0% |
| GATTTATTCATCTTGCTCAA+AGG | - | chr7_4:34437177-34437196 | Msa1150670:intron | 30.0% | |
| TTCTGATTCTATCACTACTT+TGG | + | chr7_4:34437316-34437335 | None:intergenic | 30.0% | |
| AATATATATTCTACCGGATC+CGG | + | chr7_4:34437519-34437538 | None:intergenic | 30.0% | |
| AAATTGGTCATAGTTATTGC+CGG | + | chr7_4:34437559-34437578 | None:intergenic | 30.0% | |
| CTCAAACTACACAATATCAA+TGG | + | chr7_4:34437605-34437624 | None:intergenic | 30.0% | |
| CATTGATATTGTGTAGTTTG+AGG | - | chr7_4:34437603-34437622 | Msa1150670:intron | 30.0% | |
| TTGATTTCTTGATGTAGAAG+TGG | - | chr7_4:34437676-34437695 | Msa1150670:intron | 30.0% | |
| ACTTCATTTGAATATGTTGC+TGG | - | chr7_4:34437810-34437829 | Msa1150670:intron | 30.0% | |
| TTTATAGCCAAACTTGCATA+CGG | + | chr7_4:34437852-34437871 | None:intergenic | 30.0% | |
| AACTAATATTAGTGTCATGC+TGG | + | chr7_4:34438177-34438196 | None:intergenic | 30.0% | |
| CCATAATTCTCACGTTATTA+AGG | + | chr7_4:34438327-34438346 | None:intergenic | 30.0% | |
| CCTTAATAACGTGAGAATTA+TGG | - | chr7_4:34438324-34438343 | Msa1150670:intron | 30.0% | |
| GTGAGAATTATGGTCAAATA+TGG | - | chr7_4:34438334-34438353 | Msa1150670:intron | 30.0% | |
| ATTAGCGACAGAAATTATAG+AGG | - | chr7_4:34438546-34438565 | Msa1150670:intron | 30.0% | |
| CTAGAAAAAGCTGAAATAGA+GGG | + | chr7_4:34438592-34438611 | None:intergenic | 30.0% | |
| ACTAGAAAAAGCTGAAATAG+AGG | + | chr7_4:34438593-34438612 | None:intergenic | 30.0% | |
| TAACAATGTCTATGTGTTAC+AGG | - | chr7_4:34438825-34438844 | Msa1150670:CDS | 30.0% | |
| GGTTTATAAATGCAAGAGTA+AGG | - | chr7_4:34438857-34438876 | Msa1150670:CDS | 30.0% | |
| !! | TTGCTTGCTATACTATGATT+CGG | + | chr7_4:34439075-34439094 | None:intergenic | 30.0% |
| !! | AATCAACAAGTTGGTAATGT+TGG | - | chr7_4:34439093-34439112 | Msa1150670:CDS | 30.0% |
| CTTCATCAAAATCATGGAAT+TGG | - | chr7_4:34439171-34439190 | Msa1150670:CDS | 30.0% | |
| AATTGCAGAATAGGCAATTT+GGG | - | chr7_4:34439277-34439296 | Msa1150670:CDS | 30.0% | |
| ! | CAATTTGGGAGAGATTTTAT+TGG | - | chr7_4:34439291-34439310 | Msa1150670:CDS | 30.0% |
| AACTACTAACCATGTTTCTT+GGG | - | chr7_4:34439367-34439386 | Msa1150670:five_prime_UTR | 30.0% | |
| ATTATGAAACCCAAGAAACA+TGG | + | chr7_4:34439379-34439398 | None:intergenic | 30.0% | |
| AGAAAAGAGAAAGAGAGTGA+TGG | + | chr7_4:34435239-34435258 | None:intergenic | 35.0% | |
| TTTAGTACTATGGCTGATGA+GGG | - | chr7_4:34435304-34435323 | Msa1150670:exon | 35.0% | |
| ! | TTTCTCTTCTGCTTTGTTGT+GGG | + | chr7_4:34435351-34435370 | None:intergenic | 35.0% |
| !! | TTTTCTCTTCTGCTTTGTTG+TGG | + | chr7_4:34435352-34435371 | None:intergenic | 35.0% |
| AGGTGAATAGTTAGGGTTAA+GGG | + | chr7_4:34435425-34435444 | None:intergenic | 35.0% | |
| AAGGTGAATAGTTAGGGTTA+AGG | + | chr7_4:34435426-34435445 | None:intergenic | 35.0% | |
| GAAGGTAAAGGTGAATAGTT+AGG | + | chr7_4:34435433-34435452 | None:intergenic | 35.0% | |
| TCTAAAGGTGAAATGAGTGA+AGG | + | chr7_4:34435466-34435485 | None:intergenic | 35.0% | |
| AATCATGTATACAACGATGG+TGG | - | chr7_4:34435526-34435545 | Msa1150670:CDS | 35.0% | |
| CTGTTGTTGATCATGTTTCT+AGG | - | chr7_4:34435668-34435687 | Msa1150670:CDS | 35.0% | |
| !! | TGATCATGTTTCTAGGAACA+CGG | - | chr7_4:34435675-34435694 | Msa1150670:CDS | 35.0% |
| ! | ACAGAAGCATAACCTGTAAA+TGG | + | chr7_4:34435712-34435731 | None:intergenic | 35.0% |
| !! | AGGTTATGCTTCTGTTTTGA+AGG | - | chr7_4:34435717-34435736 | Msa1150670:CDS | 35.0% |
| !! | GGTTATGCTTCTGTTTTGAA+GGG | - | chr7_4:34435718-34435737 | Msa1150670:CDS | 35.0% |
| GAAACCTGCACAACAATTAT+TGG | - | chr7_4:34435753-34435772 | Msa1150670:CDS | 35.0% | |
| TCATCCAATAATTGTTGTGC+AGG | + | chr7_4:34435760-34435779 | None:intergenic | 35.0% | |
| TTGGATGAGATATGTGATGT+TGG | - | chr7_4:34435772-34435791 | Msa1150670:CDS | 35.0% | |
| TTCCATCAAAGATGCATCAA+CGG | + | chr7_4:34435824-34435843 | None:intergenic | 35.0% | |
| GAAACTAATCATGGTAACAG+TGG | - | chr7_4:34435841-34435860 | Msa1150670:intron | 35.0% | |
| GGTAACAGTGGAATGATTAA+TGG | - | chr7_4:34435853-34435872 | Msa1150670:intron | 35.0% | |
| ATTGTTAACAGTGCTTGATG+AGG | - | chr7_4:34435924-34435943 | Msa1150670:CDS | 35.0% | |
| ACAATAGTGAGACATCGTAT+TGG | - | chr7_4:34436027-34436046 | Msa1150670:intron | 35.0% | |
| ! | TTTTAATCAACGGCATGTGT+TGG | - | chr7_4:34436316-34436335 | Msa1150670:intron | 35.0% |
| !! | TTTGGTGTTCCTTAGTTCAA+TGG | - | chr7_4:34436754-34436773 | Msa1150670:CDS | 35.0% |
| GTTCAATGGAGTTATCTACT+TGG | - | chr7_4:34436768-34436787 | Msa1150670:CDS | 35.0% | |
| ! | CAATGGTTGTACTCTTTTTG+TGG | - | chr7_4:34436904-34436923 | Msa1150670:intron | 35.0% |
| TCCAATCTCAAAATATCGGT+CGG | - | chr7_4:34437389-34437408 | Msa1150670:intron | 35.0% | |
| !! | AAGTGCAGCTTTAGATCTTT+AGG | - | chr7_4:34437645-34437664 | Msa1150670:intron | 35.0% |
| CTTCTTTGTCAATCATGAAC+AGG | - | chr7_4:34437740-34437759 | Msa1150670:intron | 35.0% | |
| TTATTACTGCATGAATCTGC+TGG | + | chr7_4:34437791-34437810 | None:intergenic | 35.0% | |
| ACTTACCGATAAACTGAATC+TGG | + | chr7_4:34437920-34437939 | None:intergenic | 35.0% | |
| ATGGTCAAATATGGATGATG+CGG | - | chr7_4:34438343-34438362 | Msa1150670:intron | 35.0% | |
| CTATCAAGTCACACTTCAAT+TGG | - | chr7_4:34438439-34438458 | Msa1150670:intron | 35.0% | |
| AAAAAGCTGAAATAGAGGGA+TGG | + | chr7_4:34438588-34438607 | None:intergenic | 35.0% | |
| CACATGTCTTGTAAAATGGT+TGG | + | chr7_4:34438637-34438656 | None:intergenic | 35.0% | |
| !! | TTTAGCCAACATTAGCTTGT+CGG | + | chr7_4:34438708-34438727 | None:intergenic | 35.0% |
| ! | CTAATGTTGGCTAAACAAAC+TGG | - | chr7_4:34438713-34438732 | Msa1150670:CDS | 35.0% |
| TCTGTTTCATTTCATGCTTG+AGG | - | chr7_4:34438781-34438800 | Msa1150670:CDS | 35.0% | |
| CTGTTTCATTTCATGCTTGA+GGG | - | chr7_4:34438782-34438801 | Msa1150670:CDS | 35.0% | |
| ATGTGTTACAGGTGTCTAAT+TGG | - | chr7_4:34438836-34438855 | Msa1150670:CDS | 35.0% | |
| TAAATGCAAGAGTAAGGCTT+TGG | - | chr7_4:34438863-34438882 | Msa1150670:CDS | 35.0% | |
| ATAGCAAGCAATCAACAAGT+TGG | - | chr7_4:34439084-34439103 | Msa1150670:CDS | 35.0% | |
| AATAATGGTGCAACAAGCAA+TGG | - | chr7_4:34439129-34439148 | Msa1150670:CDS | 35.0% | |
| ! | GTGGTTTTCAATTGCAGAAT+AGG | - | chr7_4:34439268-34439287 | Msa1150670:CDS | 35.0% |
| CAATTGCAGAATAGGCAATT+TGG | - | chr7_4:34439276-34439295 | Msa1150670:CDS | 35.0% | |
| ! | TTTGGGAGAGATTTTATTGG+TGG | - | chr7_4:34439294-34439313 | Msa1150670:CDS | 35.0% |
| ! | TTGGGAGAGATTTTATTGGT+GGG | - | chr7_4:34439295-34439314 | Msa1150670:CDS | 35.0% |
| GTTAGTAGTTGCTTAGTTAG+TGG | + | chr7_4:34439357-34439376 | None:intergenic | 35.0% | |
| CAACTACTAACCATGTTTCT+TGG | - | chr7_4:34439366-34439385 | Msa1150670:five_prime_UTR | 35.0% | |
| !! | GATTCTAGTTTGGGATTAAG+TGG | - | chr7_4:34439429-34439448 | Msa1150670:five_prime_UTR | 35.0% |
| ! | AAAGAGAGTGATGGAAGTGA+CGG | + | chr7_4:34435230-34435249 | None:intergenic | 40.0% |
| GTTTAGTACTATGGCTGATG+AGG | - | chr7_4:34435303-34435322 | Msa1150670:exon | 40.0% | |
| TGAATAGTTAGGGTTAAGGG+TGG | + | chr7_4:34435422-34435441 | None:intergenic | 40.0% | |
| GGATCGTAAAGAGAAGGTAA+AGG | + | chr7_4:34435445-34435464 | None:intergenic | 40.0% | |
| AGTGAAGGATCGTAAAGAGA+AGG | + | chr7_4:34435451-34435470 | None:intergenic | 40.0% | |
| TAACCTGTAAATGGCCCTAA+TGG | + | chr7_4:34435703-34435722 | None:intergenic | 40.0% | |
| !! | GGTGTTGATGATGATACACT+TGG | - | chr7_4:34435874-34435893 | Msa1150670:intron | 40.0% |
| !! | GATGATACACTTGGTGATGA+TGG | - | chr7_4:34435883-34435902 | Msa1150670:intron | 40.0% |
| !! | ATACACTTGGTGATGATGGA+AGG | - | chr7_4:34435887-34435906 | Msa1150670:intron | 40.0% |
| ! | AGTGAGACATCGTATTGGTA+TGG | - | chr7_4:34436032-34436051 | Msa1150670:intron | 40.0% |
| !!! | ACCGACCGATATTTTGAGAT+TGG | + | chr7_4:34437393-34437412 | None:intergenic | 40.0% |
| TCTTGATGTAGAAGTGGAAG+TGG | - | chr7_4:34437682-34437701 | Msa1150670:intron | 40.0% | |
| TCAATCATGAACAGGTTTGC+AGG | - | chr7_4:34437748-34437767 | Msa1150670:intron | 40.0% | |
| ! | TTTGAATATGTTGCTGGCCT+CGG | - | chr7_4:34437816-34437835 | Msa1150670:intron | 40.0% |
| ACCGACCAGATTCAGTTTAT+CGG | - | chr7_4:34437912-34437931 | Msa1150670:intron | 40.0% | |
| ACCGATAAACTGAATCTGGT+CGG | + | chr7_4:34437916-34437935 | None:intergenic | 40.0% | |
| ATAGAAAGGATGCATCTCCA+AGG | - | chr7_4:34437958-34437977 | Msa1150670:intron | 40.0% | |
| TATTGGACACTAGCATCTGT+CGG | - | chr7_4:34438217-34438236 | Msa1150670:intron | 40.0% | |
| ! | TGCTTTCAGTATGAAGGTGT+TGG | - | chr7_4:34438253-34438272 | Msa1150670:intron | 40.0% |
| TAGTTGAAATAGCAACGGGT+TGG | - | chr7_4:34438495-34438514 | Msa1150670:intron | 40.0% | |
| !! | TTAGCTTGTCGGTATCAGTA+GGG | + | chr7_4:34438697-34438716 | None:intergenic | 40.0% |
| !! | ATTAGCTTGTCGGTATCAGT+AGG | + | chr7_4:34438698-34438717 | None:intergenic | 40.0% |
| TGATACCGACAAGCTAATGT+TGG | - | chr7_4:34438700-34438719 | Msa1150670:intron | 40.0% | |
| ATGTGTATTTCCTCCACCAT+TGG | + | chr7_4:34438892-34438911 | None:intergenic | 40.0% | |
| TGAATCACAGCAATCTCCAA+AGG | - | chr7_4:34438915-34438934 | Msa1150670:CDS | 40.0% | |
| TCATCTCTCTGTGATTCCTT+TGG | + | chr7_4:34438934-34438953 | None:intergenic | 40.0% | |
| AACATCGTGAAACTTGTCTG+TGG | + | chr7_4:34439010-34439029 | None:intergenic | 40.0% | |
| GGAGTGAGCATGATGAATAA+TGG | - | chr7_4:34439114-34439133 | Msa1150670:CDS | 40.0% | |
| CTCGGTCTTCATCAAAATCA+TGG | - | chr7_4:34439165-34439184 | Msa1150670:CDS | 40.0% | |
| ! | CAACTTTTGCGTGACTATGT+AGG | - | chr7_4:34439318-34439337 | Msa1150670:CDS | 40.0% |
| !!! | GCTGCTGATTTTCAGCGTTA+TGG | - | chr7_4:34435643-34435662 | Msa1150670:CDS | 45.0% |
| TCTAGGAACACGGTTCCATT+AGG | - | chr7_4:34435685-34435704 | Msa1150670:CDS | 45.0% | |
| CTAGGAACACGGTTCCATTA+GGG | - | chr7_4:34435686-34435705 | Msa1150670:CDS | 45.0% | |
| GTTCCATTAGGGCCATTTAC+AGG | - | chr7_4:34435697-34435716 | Msa1150670:CDS | 45.0% | |
| !!! | CTTCTGTTTTGAAGGGATCG+AGG | - | chr7_4:34435725-34435744 | Msa1150670:CDS | 45.0% |
| TGCCGTTGATGCATCTTTGA+TGG | - | chr7_4:34435819-34435838 | Msa1150670:intron | 45.0% | |
| !! | CATACATACGGGTGTTGATG+TGG | - | chr7_4:34436129-34436148 | Msa1150670:intron | 45.0% |
| !! | ATCAACGGCATGTGTTGGTT+CGG | - | chr7_4:34436321-34436340 | Msa1150670:intron | 45.0% |
| ! | TGCAAATGCGTGCTACTCTT+GGG | - | chr7_4:34437490-34437509 | Msa1150670:intron | 45.0% |
| ATCATGAACAGGTTTGCAGG+AGG | - | chr7_4:34437751-34437770 | Msa1150670:intron | 45.0% | |
| GCATCTCCAAGGTTTCACAA+TGG | - | chr7_4:34437969-34437988 | Msa1150670:intron | 45.0% | |
| TGGACGTGTTCTATAAACCC+CGG | + | chr7_4:34438020-34438039 | None:intergenic | 45.0% | |
| AACACGTCCAACAACCTGTT+TGG | - | chr7_4:34438030-34438049 | Msa1150670:intron | 45.0% | |
| AATTGACGTCTCCTCAACTG+AGG | + | chr7_4:34438369-34438388 | None:intergenic | 45.0% | |
| !! | AACGGGTTGGTCACCAAATT+CGG | - | chr7_4:34438508-34438527 | Msa1150670:intron | 45.0% |
| ! | AACTGGTCTATCTCGTAACC+AGG | - | chr7_4:34438730-34438749 | Msa1150670:CDS | 45.0% |
| !! | AGTAAGGCTTTGGAAGCCAA+TGG | - | chr7_4:34438873-34438892 | Msa1150670:CDS | 45.0% |
| AACTTGTCTGTGGAGGTAGA+TGG | + | chr7_4:34439000-34439019 | None:intergenic | 45.0% | |
| ATCGTGAAACTTGTCTGTGG+AGG | + | chr7_4:34439007-34439026 | None:intergenic | 45.0% | |
| AATGGTGTATCTCTGACGCT+CGG | - | chr7_4:34439147-34439166 | Msa1150670:CDS | 45.0% | |
| CTGCAATTGAAAACCACTCG+CGG | + | chr7_4:34439265-34439284 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAAAAAAAAACAA+TGG | - | chr7_4:34436828-34436847 | Msa1150670:CDS | 5.0% |
| CAGCAGCACTCATCTGATTC+TGG | + | chr7_4:34435630-34435649 | None:intergenic | 50.0% | |
| ! | GTGCAAATGCGTGCTACTCT+TGG | - | chr7_4:34437489-34437508 | Msa1150670:intron | 50.0% |
| TACTCTTGGGAATCCGGATC+CGG | - | chr7_4:34437503-34437522 | Msa1150670:intron | 50.0% | |
| CCATCGCCATTGTGAAACCT+TGG | + | chr7_4:34437978-34437997 | None:intergenic | 50.0% | |
| CCAAGGTTTCACAATGGCGA+TGG | - | chr7_4:34437975-34437994 | Msa1150670:intron | 50.0% | |
| ATGGAGCCCCTTACAGTCAA+TGG | - | chr7_4:34437994-34438013 | Msa1150670:intron | 50.0% | |
| CTGTTTGGCGACCTCAAAGA+GGG | - | chr7_4:34438045-34438064 | Msa1150670:intron | 50.0% | |
| AAGAACACTGACAGCACGCT+CGG | + | chr7_4:34438075-34438094 | None:intergenic | 50.0% | |
| AGCGTGCTGTCAGTGTTCTT+AGG | - | chr7_4:34438075-34438094 | Msa1150670:intron | 50.0% | |
| GCGTGCTGTCAGTGTTCTTA+GGG | - | chr7_4:34438076-34438095 | Msa1150670:intron | 50.0% | |
| CGTGCTGTCAGTGTTCTTAG+GGG | - | chr7_4:34438077-34438096 | Msa1150670:intron | 50.0% | |
| CTGTCAGTGTTCTTAGGGGA+TGG | - | chr7_4:34438081-34438100 | Msa1150670:intron | 50.0% | |
| !! | AAGGCTTTGGAAGCCAATGG+TGG | - | chr7_4:34438876-34438895 | Msa1150670:CDS | 50.0% |
| GGCACTCATGTTGAAAGGCT+CGG | + | chr7_4:34439202-34439221 | None:intergenic | 50.0% | |
| ! | GCGTGCTACTCTTGGGAATC+CGG | - | chr7_4:34437497-34437516 | Msa1150670:intron | 55.0% |
| CGCTGCTCCGTATGCAAGTT+TGG | - | chr7_4:34437842-34437861 | Msa1150670:intron | 55.0% | |
| AGCCCCTTACAGTCAATGGC+CGG | - | chr7_4:34437998-34438017 | Msa1150670:intron | 55.0% | |
| ! | ACCCCGGCCATTGACTGTAA+GGG | + | chr7_4:34438004-34438023 | None:intergenic | 55.0% |
| ! | AACCCCGGCCATTGACTGTA+AGG | + | chr7_4:34438005-34438024 | None:intergenic | 55.0% |
| GAGGTCGCCAAACAGGTTGT+TGG | + | chr7_4:34438040-34438059 | None:intergenic | 55.0% | |
| !! | CCTCTTTGAGGTCGCCAAAC+AGG | + | chr7_4:34438047-34438066 | None:intergenic | 55.0% |
| CCTGTTTGGCGACCTCAAAG+AGG | - | chr7_4:34438044-34438063 | Msa1150670:intron | 55.0% | |
| AGAACACTGACAGCACGCTC+GGG | + | chr7_4:34438074-34438093 | None:intergenic | 55.0% | |
| !! | GCTTTGGAAGCCAATGGTGG+AGG | - | chr7_4:34438879-34438898 | Msa1150670:CDS | 55.0% |
| TGCGCGGCACTCATGTTGAA+AGG | + | chr7_4:34439207-34439226 | None:intergenic | 55.0% | |
| TGCTAGACCAAAACGCTGCG+CGG | + | chr7_4:34439223-34439242 | None:intergenic | 55.0% | |
| CATACGGAGCAGCGTTACCG+AGG | + | chr7_4:34437836-34437855 | None:intergenic | 60.0% | |
| GCCCCTTACAGTCAATGGCC+GGG | - | chr7_4:34437999-34438018 | Msa1150670:intron | 60.0% | |
| ! | CCCCGGCCATTGACTGTAAG+GGG | + | chr7_4:34438003-34438022 | None:intergenic | 60.0% |
| CCCCTTACAGTCAATGGCCG+GGG | - | chr7_4:34438000-34438019 | Msa1150670:intron | 60.0% | |
| GAACACTGACAGCACGCTCG+GGG | + | chr7_4:34438073-34438092 | None:intergenic | 60.0% | |
| GGATGATGCGGCCTCAGTTG+AGG | - | chr7_4:34438355-34438374 | Msa1150670:intron | 60.0% | |
| !! | ATGAGTGCCGCGCAGCGTTT+TGG | - | chr7_4:34439213-34439232 | Msa1150670:CDS | 60.0% |
| CCACTCGCGGCGTAACTATC+AGG | + | chr7_4:34439252-34439271 | None:intergenic | 60.0% | |
| CCTGATAGTTACGCCGCGAG+TGG | - | chr7_4:34439249-34439268 | Msa1150670:CDS | 60.0% | |
| CGCTCGGGGAGCCCTCTTTG+AGG | + | chr7_4:34438059-34438078 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 34435154 | 34439496 | 34435154 | ID=Msa1150670;Name=Msa1150670 |
| chr7_4 | mRNA | 34435154 | 34439496 | 34435154 | ID=Msa1150670-mRNA-1;Parent=Msa1150670;Name=Msa1150670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=159|1|1|1|1|1|4|152|518 |
| chr7_4 | exon | 34435154 | 34435803 | 34435154 | ID=Msa1150670-mRNA-1:exon:8166;Parent=Msa1150670-mRNA-1 |
| chr7_4 | exon | 34435899 | 34435959 | 34435899 | ID=Msa1150670-mRNA-1:exon:8165;Parent=Msa1150670-mRNA-1 |
| chr7_4 | exon | 34436524 | 34436888 | 34436524 | ID=Msa1150670-mRNA-1:exon:8164;Parent=Msa1150670-mRNA-1 |
| chr7_4 | exon | 34438705 | 34439496 | 34438705 | ID=Msa1150670-mRNA-1:exon:8163;Parent=Msa1150670-mRNA-1 |
| chr7_4 | five_prime_UTR | 34439338 | 34439496 | 34439338 | ID=Msa1150670-mRNA-1:five_prime_utr;Parent=Msa1150670-mRNA-1 |
| chr7_4 | CDS | 34438705 | 34439337 | 34438705 | ID=Msa1150670-mRNA-1:cds;Parent=Msa1150670-mRNA-1 |
| chr7_4 | CDS | 34436524 | 34436888 | 34436524 | ID=Msa1150670-mRNA-1:cds;Parent=Msa1150670-mRNA-1 |
| chr7_4 | CDS | 34435899 | 34435959 | 34435899 | ID=Msa1150670-mRNA-1:cds;Parent=Msa1150670-mRNA-1 |
| chr7_4 | CDS | 34435306 | 34435803 | 34435306 | ID=Msa1150670-mRNA-1:cds;Parent=Msa1150670-mRNA-1 |
| chr7_4 | three_prime_UTR | 34435154 | 34435305 | 34435154 | ID=Msa1150670-mRNA-1:three_prime_utr;Parent=Msa1150670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
