AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1150770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1150770 MtrunA17_Chr7g0240551 94.196 224 13 0 1 224 1 224 4.33e-155 429
Msa1150770 MtrunA17_Chr7g0240531 87.946 224 27 0 1 224 1 224 2.39e-143 399
Msa1150770 MtrunA17_Chr7g0240541 84.375 224 35 0 1 224 1 224 3.92e-140 391
Msa1150770 MtrunA17_Chr7g0240581 79.018 224 47 0 1 224 1 224 8.92e-132 370
Msa1150770 MtrunA17_Chr7g0240561 77.679 224 50 0 1 224 1 224 4.27e-128 360
Msa1150770 MtrunA17_Chr7g0240511 79.464 224 41 1 1 224 1 219 9.90e-127 357
Msa1150770 MtrunA17_Chr7g0240521 76.889 225 51 1 1 224 8 232 9.84e-118 335
Msa1150770 MtrunA17_Chr7g0240681 70.222 225 66 1 1 224 1 225 1.40e-114 326
Msa1150770 MtrunA17_Chr7g0240631 68.161 223 71 0 1 223 1 223 2.34e-114 326
Msa1150770 MtrunA17_Chr7g0240641 67.713 223 72 0 1 223 1 223 2.93e-112 320
Msa1150770 MtrunA17_Chr7g0240611 67.580 219 67 1 1 219 1 215 1.16e-105 303
Msa1150770 MtrunA17_Chr4g0008791 63.927 219 79 0 1 219 1 219 4.69e-105 302
Msa1150770 MtrunA17_Chr7g0240691 66.047 215 72 1 6 219 36 250 1.02e-102 297
Msa1150770 MtrunA17_Chr7g0240671 64.251 207 70 1 8 214 5 207 1.47e-94 275
Msa1150770 MtrunA17_Chr4g0008781 60.748 214 82 2 3 215 4 216 5.58e-94 274
Msa1150770 MtrunA17_Chr7g0240651 63.927 219 75 1 1 219 1 215 4.55e-89 261
Msa1150770 MtrunA17_Chr7g0240661 64.019 214 73 1 1 214 1 210 6.53e-87 256
Msa1150770 MtrunA17_Chr6g0483141 48.077 208 106 2 7 213 3 209 6.45e-66 203
Msa1150770 MtrunA17_Chr1g0196771 46.729 214 109 3 6 216 2 213 1.38e-62 194
Msa1150770 MtrunA17_Chr3g0132581 47.867 211 108 2 6 215 4 213 2.34e-62 194
Msa1150770 MtrunA17_Chr8g0379581 43.182 220 123 2 4 222 2 220 6.84e-60 187
Msa1150770 MtrunA17_Chr1g0212301 44.495 218 118 2 7 221 3 220 2.52e-57 181
Msa1150770 MtrunA17_Chr5g0417011 42.793 222 119 3 1 215 1 221 6.09e-56 177
Msa1150770 MtrunA17_Chr8g0379561 43.318 217 120 3 1 216 1 215 4.07e-55 175
Msa1150770 MtrunA17_Chr1g0196691 41.892 222 122 3 7 223 28 247 1.16e-53 172
Msa1150770 MtrunA17_Chr1g0196661 42.105 209 117 2 7 212 3 210 2.73e-52 168
Msa1150770 MtrunA17_Chr1g0196711 41.905 210 118 2 7 213 3 211 2.84e-51 166
Msa1150770 MtrunA17_Chr4g0029341 41.121 214 120 3 6 215 3 214 3.68e-51 165
Msa1150770 MtrunA17_Chr1g0196721 41.589 214 121 2 8 218 3 215 7.22e-51 164
Msa1150770 MtrunA17_Chr8g0363751 42.922 219 117 3 5 215 3 221 1.76e-50 164
Msa1150770 MtrunA17_Chr5g0415411 41.704 223 120 3 1 215 1 221 1.96e-49 161
Msa1150770 MtrunA17_Chr2g0312771 40.670 209 119 5 6 212 3 208 7.56e-45 149
Msa1150770 MtrunA17_Chr2g0312751 40.191 209 120 5 6 212 3 208 3.08e-44 147
Msa1150770 MtrunA17_Chr3g0107731 41.546 207 116 5 16 220 18 221 3.25e-44 147
Msa1150770 MtrunA17_Chr2g0312731 40.777 206 117 5 6 209 3 205 1.03e-43 146
Msa1150770 MtrunA17_Chr2g0312791 41.667 204 115 4 6 207 3 204 2.57e-41 140
Msa1150770 MtrunA17_Chr3g0107741 37.900 219 131 5 4 220 6 221 4.62e-41 139
Msa1150770 MtrunA17_Chr2g0312811 41.038 212 116 7 6 212 3 210 1.33e-40 138
Msa1150770 MtrunA17_Chr8g0357211 39.423 208 118 5 16 218 13 217 5.35e-40 136
Msa1150770 MtrunA17_Chr8g0357241 39.423 208 118 5 16 218 13 217 6.15e-40 136
Msa1150770 MtrunA17_Chr2g0312781 37.915 211 126 5 1 209 15 222 1.02e-39 136
Msa1150770 MtrunA17_Chr4g0069471 45.652 184 92 5 6 186 24 202 1.85e-39 134
Msa1150770 MtrunA17_Chr2g0312721 35.909 220 136 4 6 223 3 219 8.15e-39 133
Msa1150770 MtrunA17_Chr8g0391631 48.077 156 71 4 7 153 21 175 1.41e-37 129
Msa1150770 MtrunA17_Chr5g0433801 37.264 212 128 4 3 212 2 210 2.86e-37 129
Msa1150770 MtrunA17_Chr2g0312681 36.058 208 128 4 7 212 4 208 3.37e-34 121
Msa1150770 MtrunA17_Chr2g0312691 37.019 208 126 4 7 212 4 208 3.83e-34 121
Msa1150770 MtrunA17_Chr2g0312711 38.743 191 111 5 16 204 13 199 7.50e-29 107
Msa1150770 MtrunA17_Chr2g0313561 48.276 58 29 1 51 107 2 59 5.45e-14 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1150770 AT3G09270.1 53.636 220 98 4 3 219 2 220 4.72e-76 229
Msa1150770 AT2G29420.1 47.465 217 112 2 3 218 5 220 2.60e-70 214
Msa1150770 AT2G29490.1 48.325 209 105 3 1 207 1 208 2.70e-60 189
Msa1150770 AT2G29480.1 48.095 210 104 4 1 207 1 208 4.67e-58 183
Msa1150770 AT2G29450.1 46.860 207 108 2 3 207 2 208 8.88e-58 182
Msa1150770 AT2G29460.1 45.933 209 110 3 1 207 1 208 1.65e-54 174
Msa1150770 AT2G29470.1 44.762 210 112 4 1 207 1 209 6.44e-53 170
Msa1150770 AT2G29440.1 44.976 209 111 4 1 207 1 207 1.76e-52 169
Msa1150770 AT1G10370.1 42.857 224 113 5 1 214 1 219 3.55e-50 163
Msa1150770 AT1G27130.1 39.556 225 127 4 1 217 1 224 3.81e-49 160
Msa1150770 AT1G69930.1 37.500 224 134 2 2 219 7 230 4.09e-49 160
Msa1150770 AT1G59670.1 42.130 216 117 3 5 212 4 219 9.67e-48 157
Msa1150770 AT5G62480.1 39.908 218 120 4 8 215 9 225 7.96e-46 152
Msa1150770 AT1G59700.1 42.661 218 117 4 5 214 4 221 9.01e-46 152
Msa1150770 AT1G78340.1 43.721 215 113 6 6 216 3 213 1.32e-44 149
Msa1150770 AT1G78370.1 40.097 207 118 6 16 220 13 215 1.04e-43 146
Msa1150770 AT1G27140.1 37.826 230 133 4 1 221 1 229 1.65e-43 147
Msa1150770 AT1G78380.1 41.346 208 117 4 7 212 4 208 2.47e-43 145
Msa1150770 AT1G74590.1 35.909 220 134 3 1 214 1 219 3.67e-43 145
Msa1150770 AT1G10360.1 36.574 216 130 2 6 214 4 219 7.10e-43 144
Msa1150770 AT1G69920.1 37.281 228 133 4 1 218 26 253 3.00e-42 144
Msa1150770 AT1G78320.1 40.580 207 118 4 6 210 3 206 1.53e-41 141
Msa1150770 AT1G17170.1 41.315 213 119 6 6 216 3 211 1.65e-41 140
Msa1150770 AT1G53680.1 39.151 212 124 4 1 209 1 210 7.85e-40 137
Msa1150770 AT1G17180.1 39.713 209 121 5 6 212 3 208 2.15e-39 135
Msa1150770 AT1G78360.1 40.191 209 119 6 7 212 4 209 3.63e-36 127
Msa1150770 AT1G17190.1 42.697 178 97 5 16 191 14 188 6.22e-35 124
Msa1150770 AT3G43800.1 37.198 207 121 6 4 204 2 205 1.41e-33 120
Msa1150770 AT5G62480.2 31.336 217 114 4 8 215 9 199 5.92e-28 105
Msa1150770 AT5G62480.3 31.336 217 113 4 8 215 9 198 1.05e-27 105
Msa1150770 AT1G78320.2 33.010 206 108 4 6 210 3 179 1.01e-24 97.1
Msa1150770 AT2G02380.1 27.397 219 132 7 5 207 9 216 2.43e-14 69.7
Msa1150770 AT2G02390.1 27.602 221 133 6 3 207 4 213 1.89e-13 67.4
Msa1150770 AT2G02390.3 27.511 229 130 8 3 207 4 220 1.06e-12 65.5
Msa1150770 AT2G02390.2 35.714 98 59 2 3 97 4 100 7.92e-11 59.7

Find 50 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAGCCTTGACTCGTTTC+TGG 0.137920 7_4:-34582538 Msa1150770:CDS
CTCCTTGGATAATAAATTAT+TGG 0.190682 7_4:-34580613 Msa1150770:three_prime_UTR
GCTCGTTATGAAAGTCATTT+TGG 0.207854 7_4:-34580759 Msa1150770:CDS
GCTCTACGATGGCATCAAAT+AGG 0.260080 7_4:-34582823 Msa1150770:exon
GGATAATAAATTATTGGATT+TGG 0.260089 7_4:-34580607 Msa1150770:three_prime_UTR
ATATGTACTTGTGAGATTTA+AGG 0.269889 7_4:-34580712 Msa1150770:three_prime_UTR
CCAAATGCTTCTTGTATAAC+AGG 0.284363 7_4:+34580903 None:intergenic
TTGGGTGATTGTTGAATTCT+TGG 0.291920 7_4:+34580832 None:intergenic
ATTATCCAAGGAGAAATCTT+AGG 0.294121 7_4:+34580623 None:intergenic
ACAGGAACTTTCTTGTAAAC+AGG 0.303772 7_4:+34582662 None:intergenic
GAGCTCAAGGACAAATTCTT+TGG 0.339009 7_4:-34580981 Msa1150770:CDS
AATCACAAGTGACTCAGATA+TGG 0.347078 7_4:+34582619 None:intergenic
TGGCTCCAAATGTAAAGCTT+TGG 0.348494 7_4:+34580852 None:intergenic
ATCTCCACTCTTGTTACAAA+TGG 0.364739 7_4:+34582767 None:intergenic
TAAGGATCAGAAGGTAAGAT+TGG 0.370607 7_4:+34582563 None:intergenic
AATTTCCAAAGCTTTACATT+TGG 0.388847 7_4:-34580857 Msa1150770:CDS
CCTGTTATACAAGAAGCATT+TGG 0.389924 7_4:-34580903 Msa1150770:CDS
GTTCAAAATAGATCAACTTA+AGG 0.392026 7_4:-34580737 Msa1150770:exon
AATACGAGAAAGAGAAGTTT+AGG 0.396279 7_4:-34582715 Msa1150770:CDS
TTCATAACGAGCTTTGTAGA+AGG 0.410089 7_4:+34580770 None:intergenic
TTCTTTGGTGGGGAGGAGAT+TGG 0.423974 7_4:-34580966 Msa1150770:CDS
GCCTCCTAGAGAGACCCTTT+TGG 0.431280 7_4:-34580793 Msa1150770:CDS
CTCTACGATGGCATCAAATA+GGG 0.433000 7_4:-34582822 Msa1150770:exon
ATCAAATAGGGAAGAGGTAA+AGG 0.451305 7_4:-34582810 Msa1150770:CDS
TACCTTGTCATCTATGAACT+TGG 0.462042 7_4:+34582514 None:intergenic
ATCCAATAATTTATTATCCA+AGG 0.481656 7_4:+34580611 None:intergenic
TCTCCACTCTTGTTACAAAT+GGG 0.486382 7_4:+34582768 None:intergenic
GAGCTTTGTAGAAGGCCAAA+AGG 0.488923 7_4:+34580778 None:intergenic
ATCACAAGTGACTCAGATAT+GGG 0.497397 7_4:+34582620 None:intergenic
TTGAGTATATTGATGAGACT+TGG 0.504629 7_4:-34582595 Msa1150770:CDS
CAGGAACTTTCTTGTAAACA+GGG 0.506672 7_4:+34582663 None:intergenic
CTCAAGGACAAATTCTTTGG+TGG 0.512720 7_4:-34580978 Msa1150770:CDS
TCAAGGACAAATTCTTTGGT+GGG 0.523453 7_4:-34580977 Msa1150770:CDS
AGAACGTGAGAAGAGTATTG+AGG 0.526929 7_4:-34581036 Msa1150770:CDS
TGCAACCTAAGATTTCTCCT+TGG 0.545237 7_4:-34580628 Msa1150770:three_prime_UTR
AGCTTTGTAGAAGGCCAAAA+GGG 0.545982 7_4:+34580779 None:intergenic
ATTTCTTGAGAATGAGCTCA+AGG 0.546430 7_4:-34580994 Msa1150770:CDS
GAGTATTGAGGAAACAAAAG+AGG 0.559224 7_4:-34581024 Msa1150770:CDS
GATGGCATCAAATAGGGAAG+AGG 0.573950 7_4:-34582816 Msa1150770:CDS
CAAGGACAAATTCTTTGGTG+GGG 0.574827 7_4:-34580976 Msa1150770:CDS
GGACAAATTCTTTGGTGGGG+AGG 0.574875 7_4:-34580973 Msa1150770:CDS
AAGGCCAAAAGGGTCTCTCT+AGG 0.576747 7_4:+34580789 None:intergenic
GGAGATTGCACTAAAACTGA+AGG 0.581543 7_4:-34582750 Msa1150770:CDS
CAACAATCACCCAATTGTCA+AGG 0.594522 7_4:-34580823 Msa1150770:CDS
AAGCCCATTTGTAACAAGAG+TGG 0.618332 7_4:-34582771 Msa1150770:CDS
GACCAAGTTCATAGATGACA+AGG 0.631987 7_4:-34582516 Msa1150770:intron
GCCAAAAGGGTCTCTCTAGG+AGG 0.635297 7_4:+34580792 None:intergenic
GAGATTGCACTAAAACTGAA+GGG 0.650761 7_4:-34582749 Msa1150770:CDS
TAATTGAACAAGCTCTACGA+TGG 0.673591 7_4:-34582834 Msa1150770:exon
CTTGGTCCAGAAACGAGTCA+AGG 0.679207 7_4:+34582532 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTACTCATTTTTAAT+TGG + chr7_4:34581393-34581412 None:intergenic 10.0%
!!! TTCTATTAATTTTTTAAGTA+AGG + chr7_4:34582247-34582266 None:intergenic 10.0%
!!! TCATTAATTTGTTTTTATAT+AGG + chr7_4:34582318-34582337 None:intergenic 10.0%
!!! AAATATTACTCATTTTTAAT+TGG + chr7_4:34581393-34581412 None:intergenic 10.0%
!!! TTCTATTAATTTTTTAAGTA+AGG + chr7_4:34582247-34582266 None:intergenic 10.0%
!!! TCATTAATTTGTTTTTATAT+AGG + chr7_4:34582318-34582337 None:intergenic 10.0%
!! TTATCATTATGAATAAAAAC+AGG + chr7_4:34580814-34580833 None:intergenic 15.0%
!!! AGAATAATTTTAGAAAAACA+TGG + chr7_4:34581082-34581101 None:intergenic 15.0%
!!! TTTTCTAAAATTATTCTGAA+TGG - chr7_4:34581085-34581104 Msa1150770:intron 15.0%
!!! TTTTTAATTGGAAAAATGAT+AGG + chr7_4:34581381-34581400 None:intergenic 15.0%
!! CATTTAAAAACAAATATTCT+AGG + chr7_4:34581926-34581945 None:intergenic 15.0%
!!! CTAGAATATTTGTTTTTAAA+TGG - chr7_4:34581924-34581943 Msa1150770:intron 15.0%
!!! CTGAAAATATTTTTTTTAGA+AGG - chr7_4:34581964-34581983 Msa1150770:intron 15.0%
!! TTAACTTATGTTAATTGTTA+GGG + chr7_4:34582193-34582212 None:intergenic 15.0%
!! ATTAACTTATGTTAATTGTT+AGG + chr7_4:34582194-34582213 None:intergenic 15.0%
!! TTATCATTATGAATAAAAAC+AGG + chr7_4:34580814-34580833 None:intergenic 15.0%
!!! AGAATAATTTTAGAAAAACA+TGG + chr7_4:34581082-34581101 None:intergenic 15.0%
!!! TTTTCTAAAATTATTCTGAA+TGG - chr7_4:34581085-34581104 Msa1150770:intron 15.0%
!!! TTTTTAATTGGAAAAATGAT+AGG + chr7_4:34581381-34581400 None:intergenic 15.0%
!! CATTTAAAAACAAATATTCT+AGG + chr7_4:34581926-34581945 None:intergenic 15.0%
!!! CTAGAATATTTGTTTTTAAA+TGG - chr7_4:34581924-34581943 Msa1150770:intron 15.0%
!!! CTGAAAATATTTTTTTTAGA+AGG - chr7_4:34581964-34581983 Msa1150770:intron 15.0%
!! TTAACTTATGTTAATTGTTA+GGG + chr7_4:34582193-34582212 None:intergenic 15.0%
!! ATTAACTTATGTTAATTGTT+AGG + chr7_4:34582194-34582213 None:intergenic 15.0%
!! TAAAGTTTGATATTTGAACT+TGG + chr7_4:34581005-34581024 None:intergenic 20.0%
!! AGAATAAAAGAATAGATAAG+AGG + chr7_4:34581166-34581185 None:intergenic 20.0%
!!! TTTTTAATGAGAAAAGTTCA+GGG + chr7_4:34581559-34581578 None:intergenic 20.0%
!!! ATTTTTAATGAGAAAAGTTC+AGG + chr7_4:34581560-34581579 None:intergenic 20.0%
!!! TTTATGTGACTCATTTTTAT+TGG + chr7_4:34581717-34581736 None:intergenic 20.0%
!!! TTTTAAATGGTCTATTAGAA+AGG - chr7_4:34581937-34581956 Msa1150770:intron 20.0%
!!! TAATCATATGAGTAGATTTT+GGG + chr7_4:34582067-34582086 None:intergenic 20.0%
!!! TAATCATATGAGTAGATTTT+GGG + chr7_4:34582067-34582086 None:intergenic 20.0%
!! TAACTTATGTTAATTGTTAG+GGG + chr7_4:34582192-34582211 None:intergenic 20.0%
!!! TTTATATAGGAAGTTTTCTA+TGG + chr7_4:34582305-34582324 None:intergenic 20.0%
!! ATCCAATAATTTATTATCCA+AGG + chr7_4:34582847-34582866 None:intergenic 20.0%
!! GGATAATAAATTATTGGATT+TGG - chr7_4:34582848-34582867 Msa1150770:five_prime_UTR 20.0%
!! TAAAGTTTGATATTTGAACT+TGG + chr7_4:34581005-34581024 None:intergenic 20.0%
!! AGAATAAAAGAATAGATAAG+AGG + chr7_4:34581166-34581185 None:intergenic 20.0%
!!! TTTTTAATGAGAAAAGTTCA+GGG + chr7_4:34581559-34581578 None:intergenic 20.0%
!!! ATTTTTAATGAGAAAAGTTC+AGG + chr7_4:34581560-34581579 None:intergenic 20.0%
!!! TTTATGTGACTCATTTTTAT+TGG + chr7_4:34581717-34581736 None:intergenic 20.0%
!!! TTTTAAATGGTCTATTAGAA+AGG - chr7_4:34581937-34581956 Msa1150770:intron 20.0%
!!! TAATCATATGAGTAGATTTT+GGG + chr7_4:34582067-34582086 None:intergenic 20.0%
!!! TAATCATATGAGTAGATTTT+GGG + chr7_4:34582067-34582086 None:intergenic 20.0%
!! TAACTTATGTTAATTGTTAG+GGG + chr7_4:34582192-34582211 None:intergenic 20.0%
!!! TTTATATAGGAAGTTTTCTA+TGG + chr7_4:34582305-34582324 None:intergenic 20.0%
!! ATCCAATAATTTATTATCCA+AGG + chr7_4:34582847-34582866 None:intergenic 20.0%
!! GGATAATAAATTATTGGATT+TGG - chr7_4:34582848-34582867 Msa1150770:five_prime_UTR 20.0%
! ATAAAAACAACCCTTATACA+TGG - chr7_4:34581194-34581213 Msa1150770:intron 25.0%
!! TCAACACTAATTTTACATCT+TGG - chr7_4:34581419-34581438 Msa1150770:intron 25.0%
!! TTTTAATGAGAAAAGTTCAG+GGG + chr7_4:34581558-34581577 None:intergenic 25.0%
!! GAAAATAGTCTATTTTACAG+GGG + chr7_4:34581811-34581830 None:intergenic 25.0%
!! CGAAAATAGTCTATTTTACA+GGG + chr7_4:34581812-34581831 None:intergenic 25.0%
!! CCTGTAAAATAGACTATTTT+CGG - chr7_4:34581810-34581829 Msa1150770:intron 25.0%
!! CTAGGAAAAAATTCTGAAAA+TGG + chr7_4:34581908-34581927 None:intergenic 25.0%
!! TTCCAAACCAAAAATTTTCT+AGG - chr7_4:34581992-34582011 Msa1150770:intron 25.0%
!! TCCAAACCAAAAATTTTCTA+GGG - chr7_4:34581993-34582012 Msa1150770:intron 25.0%
!!! TGCTTTTTTTCCTGTAAAAT+AGG + chr7_4:34582036-34582055 None:intergenic 25.0%
!! AATCATATGAGTAGATTTTG+GGG + chr7_4:34582066-34582085 None:intergenic 25.0%
!! CTAATCATATGAGTAGATTT+TGG + chr7_4:34582068-34582087 None:intergenic 25.0%
!! AATCATATGAGTAGATTTTG+GGG + chr7_4:34582066-34582085 None:intergenic 25.0%
!! CTAATCATATGAGTAGATTT+TGG + chr7_4:34582068-34582087 None:intergenic 25.0%
! AATTTCCAAAGCTTTACATT+TGG - chr7_4:34582598-34582617 Msa1150770:CDS 25.0%
! GTTCAAAATAGATCAACTTA+AGG - chr7_4:34582718-34582737 Msa1150770:CDS 25.0%
! ATATGTACTTGTGAGATTTA+AGG - chr7_4:34582743-34582762 Msa1150770:CDS 25.0%
! CTCCTTGGATAATAAATTAT+TGG - chr7_4:34582842-34582861 Msa1150770:five_prime_UTR 25.0%
! ATAAAAACAACCCTTATACA+TGG - chr7_4:34581194-34581213 Msa1150770:intron 25.0%
!! TCAACACTAATTTTACATCT+TGG - chr7_4:34581419-34581438 Msa1150770:intron 25.0%
!! TTTTAATGAGAAAAGTTCAG+GGG + chr7_4:34581558-34581577 None:intergenic 25.0%
!! GAAAATAGTCTATTTTACAG+GGG + chr7_4:34581811-34581830 None:intergenic 25.0%
!! CGAAAATAGTCTATTTTACA+GGG + chr7_4:34581812-34581831 None:intergenic 25.0%
!! CCTGTAAAATAGACTATTTT+CGG - chr7_4:34581810-34581829 Msa1150770:intron 25.0%
!! CTAGGAAAAAATTCTGAAAA+TGG + chr7_4:34581908-34581927 None:intergenic 25.0%
!! TTCCAAACCAAAAATTTTCT+AGG - chr7_4:34581992-34582011 Msa1150770:intron 25.0%
!! TCCAAACCAAAAATTTTCTA+GGG - chr7_4:34581993-34582012 Msa1150770:intron 25.0%
!!! TGCTTTTTTTCCTGTAAAAT+AGG + chr7_4:34582036-34582055 None:intergenic 25.0%
!! AATCATATGAGTAGATTTTG+GGG + chr7_4:34582066-34582085 None:intergenic 25.0%
!! CTAATCATATGAGTAGATTT+TGG + chr7_4:34582068-34582087 None:intergenic 25.0%
!! AATCATATGAGTAGATTTTG+GGG + chr7_4:34582066-34582085 None:intergenic 25.0%
!! CTAATCATATGAGTAGATTT+TGG + chr7_4:34582068-34582087 None:intergenic 25.0%
! AATTTCCAAAGCTTTACATT+TGG - chr7_4:34582598-34582617 Msa1150770:CDS 25.0%
! GTTCAAAATAGATCAACTTA+AGG - chr7_4:34582718-34582737 Msa1150770:CDS 25.0%
! ATATGTACTTGTGAGATTTA+AGG - chr7_4:34582743-34582762 Msa1150770:CDS 25.0%
! CTCCTTGGATAATAAATTAT+TGG - chr7_4:34582842-34582861 Msa1150770:five_prime_UTR 25.0%
! ATGTACTCAAACTACGTTTT+TGG + chr7_4:34580602-34580621 None:intergenic 30.0%
AATACGAGAAAGAGAAGTTT+AGG - chr7_4:34580740-34580759 Msa1150770:exon 30.0%
TTGAGTATATTGATGAGACT+TGG - chr7_4:34580860-34580879 Msa1150770:CDS 30.0%
TACACAAAGAAAACAGAAGA+GGG + chr7_4:34580974-34580993 None:intergenic 30.0%
TTACACAAAGAAAACAGAAG+AGG + chr7_4:34580975-34580994 None:intergenic 30.0%
! GCAAGTAAATTTGAGATCTT+AGG - chr7_4:34581044-34581063 Msa1150770:CDS 30.0%
AATGAAACTCATCCAAAAAG+AGG - chr7_4:34581277-34581296 Msa1150770:intron 30.0%
AGAGAGGAGAAATAAAGATA+GGG - chr7_4:34581484-34581503 Msa1150770:intron 30.0%
TGAAACCATTTGCAAAATCT+AGG - chr7_4:34581768-34581787 Msa1150770:intron 30.0%
GAAACCATTTGCAAAATCTA+GGG - chr7_4:34581769-34581788 Msa1150770:intron 30.0%
! TTAACCCTAGATTTTGCAAA+TGG + chr7_4:34581776-34581795 None:intergenic 30.0%
! CCGAAAATAGTCTATTTTAC+AGG + chr7_4:34581813-34581832 None:intergenic 30.0%
! TTTACTCCCTAGGAAATTTT+TGG - chr7_4:34581833-34581852 Msa1150770:intron 30.0%
TCCAAACCAAAAATTTCCTA+GGG + chr7_4:34581842-34581861 None:intergenic 30.0%
TTCCAAACCAAAAATTTCCT+AGG + chr7_4:34581843-34581862 None:intergenic 30.0%
! ATTCTGGATTGTTTTCTAAC+AGG + chr7_4:34581871-34581890 None:intergenic 30.0%
! ATTCTGAAAATGGCCTATTA+AGG + chr7_4:34581898-34581917 None:intergenic 30.0%
!!! TCCCTAGAAAATTTTTGGTT+TGG + chr7_4:34581997-34582016 None:intergenic 30.0%
!! AAACCAAAAATTTTCTAGGG+AGG - chr7_4:34581996-34582015 Msa1150770:intron 30.0%
! TTACCTCCCTAGAAAATTTT+TGG + chr7_4:34582002-34582021 None:intergenic 30.0%
!! CCTGTAAAATAGGTCATTTT+TGG + chr7_4:34582026-34582045 None:intergenic 30.0%
! CCAAAAATGACCTATTTTAC+AGG - chr7_4:34582023-34582042 Msa1150770:intron 30.0%
! TTCTTTTTACAGTGTTTGAG+TGG - chr7_4:34582363-34582382 Msa1150770:intron 30.0%
AATCCAAAAAGCTATGAGTA+CGG + chr7_4:34582532-34582551 None:intergenic 30.0%
ATTATCCAAGGAGAAATCTT+AGG + chr7_4:34582835-34582854 None:intergenic 30.0%
! ATGTACTCAAACTACGTTTT+TGG + chr7_4:34580602-34580621 None:intergenic 30.0%
AATACGAGAAAGAGAAGTTT+AGG - chr7_4:34580740-34580759 Msa1150770:exon 30.0%
TTGAGTATATTGATGAGACT+TGG - chr7_4:34580860-34580879 Msa1150770:CDS 30.0%
TACACAAAGAAAACAGAAGA+GGG + chr7_4:34580974-34580993 None:intergenic 30.0%
TTACACAAAGAAAACAGAAG+AGG + chr7_4:34580975-34580994 None:intergenic 30.0%
! GCAAGTAAATTTGAGATCTT+AGG - chr7_4:34581044-34581063 Msa1150770:CDS 30.0%
AATGAAACTCATCCAAAAAG+AGG - chr7_4:34581277-34581296 Msa1150770:intron 30.0%
AGAGAGGAGAAATAAAGATA+GGG - chr7_4:34581484-34581503 Msa1150770:intron 30.0%
TGAAACCATTTGCAAAATCT+AGG - chr7_4:34581768-34581787 Msa1150770:intron 30.0%
GAAACCATTTGCAAAATCTA+GGG - chr7_4:34581769-34581788 Msa1150770:intron 30.0%
! TTAACCCTAGATTTTGCAAA+TGG + chr7_4:34581776-34581795 None:intergenic 30.0%
! CCGAAAATAGTCTATTTTAC+AGG + chr7_4:34581813-34581832 None:intergenic 30.0%
! TTTACTCCCTAGGAAATTTT+TGG - chr7_4:34581833-34581852 Msa1150770:intron 30.0%
TCCAAACCAAAAATTTCCTA+GGG + chr7_4:34581842-34581861 None:intergenic 30.0%
TTCCAAACCAAAAATTTCCT+AGG + chr7_4:34581843-34581862 None:intergenic 30.0%
! ATTCTGGATTGTTTTCTAAC+AGG + chr7_4:34581871-34581890 None:intergenic 30.0%
! ATTCTGAAAATGGCCTATTA+AGG + chr7_4:34581898-34581917 None:intergenic 30.0%
!!! TCCCTAGAAAATTTTTGGTT+TGG + chr7_4:34581997-34582016 None:intergenic 30.0%
!! AAACCAAAAATTTTCTAGGG+AGG - chr7_4:34581996-34582015 Msa1150770:intron 30.0%
! TTACCTCCCTAGAAAATTTT+TGG + chr7_4:34582002-34582021 None:intergenic 30.0%
!! CCTGTAAAATAGGTCATTTT+TGG + chr7_4:34582026-34582045 None:intergenic 30.0%
! CCAAAAATGACCTATTTTAC+AGG - chr7_4:34582023-34582042 Msa1150770:intron 30.0%
! TTCTTTTTACAGTGTTTGAG+TGG - chr7_4:34582363-34582382 Msa1150770:intron 30.0%
AATCCAAAAAGCTATGAGTA+CGG + chr7_4:34582532-34582551 None:intergenic 30.0%
ATTATCCAAGGAGAAATCTT+AGG + chr7_4:34582835-34582854 None:intergenic 30.0%
TAATTGAACAAGCTCTACGA+TGG - chr7_4:34580621-34580640 Msa1150770:three_prime_UTR 35.0%
ATCAAATAGGGAAGAGGTAA+AGG - chr7_4:34580645-34580664 Msa1150770:three_prime_UTR 35.0%
!! AGAGGTAAAGGTTTTTGGAT+TGG - chr7_4:34580657-34580676 Msa1150770:three_prime_UTR 35.0%
TCTCCACTCTTGTTACAAAT+GGG + chr7_4:34580690-34580709 None:intergenic 35.0%
ATCTCCACTCTTGTTACAAA+TGG + chr7_4:34580691-34580710 None:intergenic 35.0%
GAGATTGCACTAAAACTGAA+GGG - chr7_4:34580706-34580725 Msa1150770:three_prime_UTR 35.0%
CAGGAACTTTCTTGTAAACA+GGG + chr7_4:34580795-34580814 None:intergenic 35.0%
ACAGGAACTTTCTTGTAAAC+AGG + chr7_4:34580796-34580815 None:intergenic 35.0%
ATCACAAGTGACTCAGATAT+GGG + chr7_4:34580838-34580857 None:intergenic 35.0%
AATCACAAGTGACTCAGATA+TGG + chr7_4:34580839-34580858 None:intergenic 35.0%
TAAGGATCAGAAGGTAAGAT+TGG + chr7_4:34580895-34580914 None:intergenic 35.0%
TACCTTGTCATCTATGAACT+TGG + chr7_4:34580944-34580963 None:intergenic 35.0%
ACACAAAGAAAACAGAAGAG+GGG + chr7_4:34580973-34580992 None:intergenic 35.0%
TTAAGGTGGTCCATGTATAA+GGG + chr7_4:34581207-34581226 None:intergenic 35.0%
AATTGTATGTGGGTGTCAAA+GGG + chr7_4:34581240-34581259 None:intergenic 35.0%
CACGTATCACAATTGTATGT+GGG + chr7_4:34581250-34581269 None:intergenic 35.0%
TTACTAAAATACCTCTCACG+TGG - chr7_4:34581319-34581338 Msa1150770:intron 35.0%
TTATGCCTATAGAGAACATG+TGG + chr7_4:34581457-34581476 None:intergenic 35.0%
TAGGCATAAAACAATGAGAG+AGG - chr7_4:34581468-34581487 Msa1150770:intron 35.0%
GAGAGAGGAGAAATAAAGAT+AGG - chr7_4:34581483-34581502 Msa1150770:intron 35.0%
GAGAGGAGAAATAAAGATAG+GGG - chr7_4:34581485-34581504 Msa1150770:intron 35.0%
! TTGCAAAATCTAGGGTTAAC+AGG - chr7_4:34581777-34581796 Msa1150770:intron 35.0%
! TGCAAAATCTAGGGTTAACA+GGG - chr7_4:34581778-34581797 Msa1150770:intron 35.0%
!!! TCCCTAGGAAATTTTTGGTT+TGG - chr7_4:34581838-34581857 Msa1150770:intron 35.0%
AAGTTATCCACCACTCTTTA+AGG - chr7_4:34582156-34582175 Msa1150770:intron 35.0%
AGTTATCCACCACTCTTTAA+GGG - chr7_4:34582157-34582176 Msa1150770:intron 35.0%
!! GAGTATTGAGGAAACAAAAG+AGG - chr7_4:34582431-34582450 Msa1150770:intron 35.0%
ATTTCTTGAGAATGAGCTCA+AGG - chr7_4:34582461-34582480 Msa1150770:intron 35.0%
TCAAGGACAAATTCTTTGGT+GGG - chr7_4:34582478-34582497 Msa1150770:intron 35.0%
CCAAATGCTTCTTGTATAAC+AGG + chr7_4:34582555-34582574 None:intergenic 35.0%
!! CCTGTTATACAAGAAGCATT+TGG - chr7_4:34582552-34582571 Msa1150770:CDS 35.0%
TTGGGTGATTGTTGAATTCT+TGG + chr7_4:34582626-34582645 None:intergenic 35.0%
! GCAGTTTTTCCTTGACAATT+GGG + chr7_4:34582644-34582663 None:intergenic 35.0%
! TTCATAACGAGCTTTGTAGA+AGG + chr7_4:34582688-34582707 None:intergenic 35.0%
! GCTCGTTATGAAAGTCATTT+TGG - chr7_4:34582696-34582715 Msa1150770:CDS 35.0%
TAATTGAACAAGCTCTACGA+TGG - chr7_4:34580621-34580640 Msa1150770:three_prime_UTR 35.0%
ATCAAATAGGGAAGAGGTAA+AGG - chr7_4:34580645-34580664 Msa1150770:three_prime_UTR 35.0%
!! AGAGGTAAAGGTTTTTGGAT+TGG - chr7_4:34580657-34580676 Msa1150770:three_prime_UTR 35.0%
TCTCCACTCTTGTTACAAAT+GGG + chr7_4:34580690-34580709 None:intergenic 35.0%
ATCTCCACTCTTGTTACAAA+TGG + chr7_4:34580691-34580710 None:intergenic 35.0%
GAGATTGCACTAAAACTGAA+GGG - chr7_4:34580706-34580725 Msa1150770:three_prime_UTR 35.0%
CAGGAACTTTCTTGTAAACA+GGG + chr7_4:34580795-34580814 None:intergenic 35.0%
ACAGGAACTTTCTTGTAAAC+AGG + chr7_4:34580796-34580815 None:intergenic 35.0%
ATCACAAGTGACTCAGATAT+GGG + chr7_4:34580838-34580857 None:intergenic 35.0%
AATCACAAGTGACTCAGATA+TGG + chr7_4:34580839-34580858 None:intergenic 35.0%
TAAGGATCAGAAGGTAAGAT+TGG + chr7_4:34580895-34580914 None:intergenic 35.0%
TACCTTGTCATCTATGAACT+TGG + chr7_4:34580944-34580963 None:intergenic 35.0%
ACACAAAGAAAACAGAAGAG+GGG + chr7_4:34580973-34580992 None:intergenic 35.0%
TTAAGGTGGTCCATGTATAA+GGG + chr7_4:34581207-34581226 None:intergenic 35.0%
AATTGTATGTGGGTGTCAAA+GGG + chr7_4:34581240-34581259 None:intergenic 35.0%
CACGTATCACAATTGTATGT+GGG + chr7_4:34581250-34581269 None:intergenic 35.0%
TTACTAAAATACCTCTCACG+TGG - chr7_4:34581319-34581338 Msa1150770:intron 35.0%
TTATGCCTATAGAGAACATG+TGG + chr7_4:34581457-34581476 None:intergenic 35.0%
TAGGCATAAAACAATGAGAG+AGG - chr7_4:34581468-34581487 Msa1150770:intron 35.0%
GAGAGAGGAGAAATAAAGAT+AGG - chr7_4:34581483-34581502 Msa1150770:intron 35.0%
GAGAGGAGAAATAAAGATAG+GGG - chr7_4:34581485-34581504 Msa1150770:intron 35.0%
! TTGCAAAATCTAGGGTTAAC+AGG - chr7_4:34581777-34581796 Msa1150770:intron 35.0%
! TGCAAAATCTAGGGTTAACA+GGG - chr7_4:34581778-34581797 Msa1150770:intron 35.0%
!!! TCCCTAGGAAATTTTTGGTT+TGG - chr7_4:34581838-34581857 Msa1150770:intron 35.0%
AAGTTATCCACCACTCTTTA+AGG - chr7_4:34582156-34582175 Msa1150770:intron 35.0%
AGTTATCCACCACTCTTTAA+GGG - chr7_4:34582157-34582176 Msa1150770:intron 35.0%
!! GAGTATTGAGGAAACAAAAG+AGG - chr7_4:34582431-34582450 Msa1150770:intron 35.0%
ATTTCTTGAGAATGAGCTCA+AGG - chr7_4:34582461-34582480 Msa1150770:intron 35.0%
TCAAGGACAAATTCTTTGGT+GGG - chr7_4:34582478-34582497 Msa1150770:intron 35.0%
CCAAATGCTTCTTGTATAAC+AGG + chr7_4:34582555-34582574 None:intergenic 35.0%
!! CCTGTTATACAAGAAGCATT+TGG - chr7_4:34582552-34582571 Msa1150770:CDS 35.0%
TTGGGTGATTGTTGAATTCT+TGG + chr7_4:34582626-34582645 None:intergenic 35.0%
! GCAGTTTTTCCTTGACAATT+GGG + chr7_4:34582644-34582663 None:intergenic 35.0%
! TTCATAACGAGCTTTGTAGA+AGG + chr7_4:34582688-34582707 None:intergenic 35.0%
! GCTCGTTATGAAAGTCATTT+TGG - chr7_4:34582696-34582715 Msa1150770:CDS 35.0%
CTCTACGATGGCATCAAATA+GGG - chr7_4:34580633-34580652 Msa1150770:three_prime_UTR 40.0%
! AGGGAAGAGGTAAAGGTTTT+TGG - chr7_4:34580652-34580671 Msa1150770:three_prime_UTR 40.0%
!! GGTAAAGGTTTTTGGATTGG+TGG - chr7_4:34580660-34580679 Msa1150770:three_prime_UTR 40.0%
AAGCCCATTTGTAACAAGAG+TGG - chr7_4:34580684-34580703 Msa1150770:three_prime_UTR 40.0%
GGAGATTGCACTAAAACTGA+AGG - chr7_4:34580705-34580724 Msa1150770:three_prime_UTR 40.0%
! GCTCTTTTGTAAGGATCAGA+AGG + chr7_4:34580904-34580923 None:intergenic 40.0%
GACCAAGTTCATAGATGACA+AGG - chr7_4:34580939-34580958 Msa1150770:CDS 40.0%
TGAGATCTTAGGTGTGTCTT+TGG - chr7_4:34581055-34581074 Msa1150770:CDS 40.0%
GAGATCTTAGGTGTGTCTTT+GGG - chr7_4:34581056-34581075 Msa1150770:CDS 40.0%
CTTAAGGTGGTCCATGTATA+AGG + chr7_4:34581208-34581227 None:intergenic 40.0%
TATACATGGACCACCTTAAG+TGG - chr7_4:34581208-34581227 Msa1150770:intron 40.0%
CAATTGTATGTGGGTGTCAA+AGG + chr7_4:34581241-34581260 None:intergenic 40.0%
CCACGTATCACAATTGTATG+TGG + chr7_4:34581251-34581270 None:intergenic 40.0%
CCACATACAATTGTGATACG+TGG - chr7_4:34581248-34581267 Msa1150770:intron 40.0%
CTCATCCAAAAAGAGGATGA+TGG - chr7_4:34581284-34581303 Msa1150770:intron 40.0%
! TCACACCATCATCCTCTTTT+TGG + chr7_4:34581292-34581311 None:intergenic 40.0%
TCACACCACATGTTCTCTAT+AGG - chr7_4:34581449-34581468 Msa1150770:intron 40.0%
! CTATTTTCGGTTTACTCCCT+AGG - chr7_4:34581823-34581842 Msa1150770:intron 40.0%
ATCCAGAATACCGCCTTAAT+AGG - chr7_4:34581882-34581901 Msa1150770:intron 40.0%
CTGAAAATGGCCTATTAAGG+CGG + chr7_4:34581895-34581914 None:intergenic 40.0%
!! AGAACGTGAGAAGAGTATTG+AGG - chr7_4:34582419-34582438 Msa1150770:intron 40.0%
GAGCTCAAGGACAAATTCTT+TGG - chr7_4:34582474-34582493 Msa1150770:intron 40.0%
CTCAAGGACAAATTCTTTGG+TGG - chr7_4:34582477-34582496 Msa1150770:intron 40.0%
CAAGGACAAATTCTTTGGTG+GGG - chr7_4:34582479-34582498 Msa1150770:intron 40.0%
TGGCTCCAAATGTAAAGCTT+TGG + chr7_4:34582606-34582625 None:intergenic 40.0%
CAACAATCACCCAATTGTCA+AGG - chr7_4:34582632-34582651 Msa1150770:CDS 40.0%
! GGCAGTTTTTCCTTGACAAT+TGG + chr7_4:34582645-34582664 None:intergenic 40.0%
! AGCTTTGTAGAAGGCCAAAA+GGG + chr7_4:34582679-34582698 None:intergenic 40.0%
TGCAACCTAAGATTTCTCCT+TGG - chr7_4:34582827-34582846 Msa1150770:exon 40.0%
CTCTACGATGGCATCAAATA+GGG - chr7_4:34580633-34580652 Msa1150770:three_prime_UTR 40.0%
! AGGGAAGAGGTAAAGGTTTT+TGG - chr7_4:34580652-34580671 Msa1150770:three_prime_UTR 40.0%
!! GGTAAAGGTTTTTGGATTGG+TGG - chr7_4:34580660-34580679 Msa1150770:three_prime_UTR 40.0%
AAGCCCATTTGTAACAAGAG+TGG - chr7_4:34580684-34580703 Msa1150770:three_prime_UTR 40.0%
GGAGATTGCACTAAAACTGA+AGG - chr7_4:34580705-34580724 Msa1150770:three_prime_UTR 40.0%
! GCTCTTTTGTAAGGATCAGA+AGG + chr7_4:34580904-34580923 None:intergenic 40.0%
GACCAAGTTCATAGATGACA+AGG - chr7_4:34580939-34580958 Msa1150770:CDS 40.0%
TGAGATCTTAGGTGTGTCTT+TGG - chr7_4:34581055-34581074 Msa1150770:CDS 40.0%
GAGATCTTAGGTGTGTCTTT+GGG - chr7_4:34581056-34581075 Msa1150770:CDS 40.0%
CTTAAGGTGGTCCATGTATA+AGG + chr7_4:34581208-34581227 None:intergenic 40.0%
TATACATGGACCACCTTAAG+TGG - chr7_4:34581208-34581227 Msa1150770:intron 40.0%
CAATTGTATGTGGGTGTCAA+AGG + chr7_4:34581241-34581260 None:intergenic 40.0%
CCACGTATCACAATTGTATG+TGG + chr7_4:34581251-34581270 None:intergenic 40.0%
CCACATACAATTGTGATACG+TGG - chr7_4:34581248-34581267 Msa1150770:intron 40.0%
CTCATCCAAAAAGAGGATGA+TGG - chr7_4:34581284-34581303 Msa1150770:intron 40.0%
! TCACACCATCATCCTCTTTT+TGG + chr7_4:34581292-34581311 None:intergenic 40.0%
TCACACCACATGTTCTCTAT+AGG - chr7_4:34581449-34581468 Msa1150770:intron 40.0%
! CTATTTTCGGTTTACTCCCT+AGG - chr7_4:34581823-34581842 Msa1150770:intron 40.0%
ATCCAGAATACCGCCTTAAT+AGG - chr7_4:34581882-34581901 Msa1150770:intron 40.0%
CTGAAAATGGCCTATTAAGG+CGG + chr7_4:34581895-34581914 None:intergenic 40.0%
!! AGAACGTGAGAAGAGTATTG+AGG - chr7_4:34582419-34582438 Msa1150770:intron 40.0%
GAGCTCAAGGACAAATTCTT+TGG - chr7_4:34582474-34582493 Msa1150770:intron 40.0%
CTCAAGGACAAATTCTTTGG+TGG - chr7_4:34582477-34582496 Msa1150770:intron 40.0%
CAAGGACAAATTCTTTGGTG+GGG - chr7_4:34582479-34582498 Msa1150770:intron 40.0%
TGGCTCCAAATGTAAAGCTT+TGG + chr7_4:34582606-34582625 None:intergenic 40.0%
CAACAATCACCCAATTGTCA+AGG - chr7_4:34582632-34582651 Msa1150770:CDS 40.0%
! GGCAGTTTTTCCTTGACAAT+TGG + chr7_4:34582645-34582664 None:intergenic 40.0%
! AGCTTTGTAGAAGGCCAAAA+GGG + chr7_4:34582679-34582698 None:intergenic 40.0%
TGCAACCTAAGATTTCTCCT+TGG - chr7_4:34582827-34582846 Msa1150770:exon 40.0%
GCTCTACGATGGCATCAAAT+AGG - chr7_4:34580632-34580651 Msa1150770:three_prime_UTR 45.0%
GATGGCATCAAATAGGGAAG+AGG - chr7_4:34580639-34580658 Msa1150770:three_prime_UTR 45.0%
! CGAGTCAAGGCTCTTTTGTA+AGG + chr7_4:34580913-34580932 None:intergenic 45.0%
! AAAGAGCCTTGACTCGTTTC+TGG - chr7_4:34580917-34580936 Msa1150770:CDS 45.0%
! CAAAGGGTGTATGCCACTTA+AGG + chr7_4:34581224-34581243 None:intergenic 45.0%
ATAGGGGAGAGATGTGAGTT+GGG - chr7_4:34581501-34581520 Msa1150770:intron 45.0%
! AGATGTGAGTTGGGTGGATT+GGG - chr7_4:34581510-34581529 Msa1150770:intron 45.0%
GAACTCTTCTTCGAGAAGAG+TGG + chr7_4:34581591-34581610 None:intergenic 45.0%
! TATCCACCACTCTTTAAGGG+TGG - chr7_4:34582160-34582179 Msa1150770:intron 45.0%
! CTGCCGTACTCATAGCTTTT+TGG - chr7_4:34582526-34582545 Msa1150770:CDS 45.0%
! GAGCTTTGTAGAAGGCCAAA+AGG + chr7_4:34582680-34582699 None:intergenic 45.0%
GCTCTACGATGGCATCAAAT+AGG - chr7_4:34580632-34580651 Msa1150770:three_prime_UTR 45.0%
GATGGCATCAAATAGGGAAG+AGG - chr7_4:34580639-34580658 Msa1150770:three_prime_UTR 45.0%
! CGAGTCAAGGCTCTTTTGTA+AGG + chr7_4:34580913-34580932 None:intergenic 45.0%
! AAAGAGCCTTGACTCGTTTC+TGG - chr7_4:34580917-34580936 Msa1150770:CDS 45.0%
! CAAAGGGTGTATGCCACTTA+AGG + chr7_4:34581224-34581243 None:intergenic 45.0%
ATAGGGGAGAGATGTGAGTT+GGG - chr7_4:34581501-34581520 Msa1150770:intron 45.0%
! AGATGTGAGTTGGGTGGATT+GGG - chr7_4:34581510-34581529 Msa1150770:intron 45.0%
GAACTCTTCTTCGAGAAGAG+TGG + chr7_4:34581591-34581610 None:intergenic 45.0%
! TATCCACCACTCTTTAAGGG+TGG - chr7_4:34582160-34582179 Msa1150770:intron 45.0%
! CTGCCGTACTCATAGCTTTT+TGG - chr7_4:34582526-34582545 Msa1150770:CDS 45.0%
! GAGCTTTGTAGAAGGCCAAA+AGG + chr7_4:34582680-34582699 None:intergenic 45.0%
CTTGGTCCAGAAACGAGTCA+AGG + chr7_4:34580926-34580945 None:intergenic 50.0%
! AGGGTGTATGCCACTTAAGG+TGG + chr7_4:34581221-34581240 None:intergenic 50.0%
CATGTACACTTCCACGTGAG+AGG + chr7_4:34581333-34581352 None:intergenic 50.0%
! CACGTGGAAGTGTACATGAG+AGG - chr7_4:34581335-34581354 Msa1150770:intron 50.0%
GATAGGGGAGAGATGTGAGT+TGG - chr7_4:34581500-34581519 Msa1150770:intron 50.0%
! GAGATGTGAGTTGGGTGGAT+TGG - chr7_4:34581509-34581528 Msa1150770:intron 50.0%
!! GATGTGAGTTGGGTGGATTG+GGG - chr7_4:34581511-34581530 Msa1150770:intron 50.0%
!! TTGGGTGGATTGGGGTTTGT+TGG - chr7_4:34581519-34581538 Msa1150770:intron 50.0%
!! TGGGTGGATTGGGGTTTGTT+GGG - chr7_4:34581520-34581539 Msa1150770:intron 50.0%
GGCCTATTAAGGCGGTATTC+TGG + chr7_4:34581887-34581906 None:intergenic 50.0%
ATGCCACCCTTAAAGAGTGG+TGG + chr7_4:34582166-34582185 None:intergenic 50.0%
CCTATGCCACCCTTAAAGAG+TGG + chr7_4:34582169-34582188 None:intergenic 50.0%
! CCACTCTTTAAGGGTGGCAT+AGG - chr7_4:34582166-34582185 Msa1150770:intron 50.0%
GGACAAATTCTTTGGTGGGG+AGG - chr7_4:34582482-34582501 Msa1150770:intron 50.0%
TTCTTTGGTGGGGAGGAGAT+TGG - chr7_4:34582489-34582508 Msa1150770:intron 50.0%
AAGGCCAAAAGGGTCTCTCT+AGG + chr7_4:34582669-34582688 None:intergenic 50.0%
CTTGGTCCAGAAACGAGTCA+AGG + chr7_4:34580926-34580945 None:intergenic 50.0%
! AGGGTGTATGCCACTTAAGG+TGG + chr7_4:34581221-34581240 None:intergenic 50.0%
CATGTACACTTCCACGTGAG+AGG + chr7_4:34581333-34581352 None:intergenic 50.0%
! CACGTGGAAGTGTACATGAG+AGG - chr7_4:34581335-34581354 Msa1150770:intron 50.0%
GATAGGGGAGAGATGTGAGT+TGG - chr7_4:34581500-34581519 Msa1150770:intron 50.0%
! GAGATGTGAGTTGGGTGGAT+TGG - chr7_4:34581509-34581528 Msa1150770:intron 50.0%
!! GATGTGAGTTGGGTGGATTG+GGG - chr7_4:34581511-34581530 Msa1150770:intron 50.0%
!! TTGGGTGGATTGGGGTTTGT+TGG - chr7_4:34581519-34581538 Msa1150770:intron 50.0%
!! TGGGTGGATTGGGGTTTGTT+GGG - chr7_4:34581520-34581539 Msa1150770:intron 50.0%
GGCCTATTAAGGCGGTATTC+TGG + chr7_4:34581887-34581906 None:intergenic 50.0%
ATGCCACCCTTAAAGAGTGG+TGG + chr7_4:34582166-34582185 None:intergenic 50.0%
CCTATGCCACCCTTAAAGAG+TGG + chr7_4:34582169-34582188 None:intergenic 50.0%
! CCACTCTTTAAGGGTGGCAT+AGG - chr7_4:34582166-34582185 Msa1150770:intron 50.0%
GGACAAATTCTTTGGTGGGG+AGG - chr7_4:34582482-34582501 Msa1150770:intron 50.0%
TTCTTTGGTGGGGAGGAGAT+TGG - chr7_4:34582489-34582508 Msa1150770:intron 50.0%
AAGGCCAAAAGGGTCTCTCT+AGG + chr7_4:34582669-34582688 None:intergenic 50.0%
!! GGGTGGATTGGGGTTTGTTG+GGG - chr7_4:34581521-34581540 Msa1150770:intron 55.0%
!! GGTGGATTGGGGTTTGTTGG+GGG - chr7_4:34581522-34581541 Msa1150770:intron 55.0%
!! ATTGGGGTTTGTTGGGGGCA+GGG - chr7_4:34581527-34581546 Msa1150770:intron 55.0%
! GCCTCCTAGAGAGACCCTTT+TGG - chr7_4:34582662-34582681 Msa1150770:CDS 55.0%
GCCAAAAGGGTCTCTCTAGG+AGG + chr7_4:34582666-34582685 None:intergenic 55.0%
!! GGGTGGATTGGGGTTTGTTG+GGG - chr7_4:34581521-34581540 Msa1150770:intron 55.0%
!! GGTGGATTGGGGTTTGTTGG+GGG - chr7_4:34581522-34581541 Msa1150770:intron 55.0%
!! ATTGGGGTTTGTTGGGGGCA+GGG - chr7_4:34581527-34581546 Msa1150770:intron 55.0%
! GCCTCCTAGAGAGACCCTTT+TGG - chr7_4:34582662-34582681 Msa1150770:CDS 55.0%
GCCAAAAGGGTCTCTCTAGG+AGG + chr7_4:34582666-34582685 None:intergenic 55.0%
! GGGGAGAGATGTGAGTTGGG+TGG - chr7_4:34581504-34581523 Msa1150770:intron 60.0%
!! GATTGGGGTTTGTTGGGGGC+AGG - chr7_4:34581526-34581545 Msa1150770:intron 60.0%
!! TTGGGGTTTGTTGGGGGCAG+GGG - chr7_4:34581528-34581547 Msa1150770:intron 60.0%
! GGGGAGAGATGTGAGTTGGG+TGG - chr7_4:34581504-34581523 Msa1150770:intron 60.0%
!! GATTGGGGTTTGTTGGGGGC+AGG - chr7_4:34581526-34581545 Msa1150770:intron 60.0%
!! TTGGGGTTTGTTGGGGGCAG+GGG - chr7_4:34581528-34581547 Msa1150770:intron 60.0%
!! TGGGGTTTGTTGGGGGCAGG+GGG - chr7_4:34581529-34581548 Msa1150770:intron 65.0%
!! TGGGGTTTGTTGGGGGCAGG+GGG - chr7_4:34581529-34581548 Msa1150770:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 34580592 34582885 34580592 ID=Msa1150770;Name=Msa1150770
chr7_4 mRNA 34580592 34582885 34580592 ID=Msa1150770-mRNA-1;Parent=Msa1150770;Name=Msa1150770-mRNA-1;_AED=0.41;_eAED=0.41;_QI=48|1|1|1|1|1|2|157|224
chr7_4 exon 34580592 34581102 34580592 ID=Msa1150770-mRNA-1:exon:8220;Parent=Msa1150770-mRNA-1
chr7_4 exon 34582517 34582885 34582517 ID=Msa1150770-mRNA-1:exon:8219;Parent=Msa1150770-mRNA-1
chr7_4 five_prime_UTR 34582838 34582885 34582838 ID=Msa1150770-mRNA-1:five_prime_utr;Parent=Msa1150770-mRNA-1
chr7_4 CDS 34582517 34582837 34582517 ID=Msa1150770-mRNA-1:cds;Parent=Msa1150770-mRNA-1
chr7_4 CDS 34580749 34581102 34580749 ID=Msa1150770-mRNA-1:cds;Parent=Msa1150770-mRNA-1
chr7_4 three_prime_UTR 34580592 34580748 34580592 ID=Msa1150770-mRNA-1:three_prime_utr;Parent=Msa1150770-mRNA-1
Gene Sequence

>Msa1150770

ATGGCATCAAATAGGGAAGAGGTAAAGGTTTTTGGATTGGTGGAAAGCCCATTTGTAACAAGAGTGGAGATTGCACTAAAACTGAAGGGAGTTGAATACAAATACGAGAAAGAGAAGTTTAGGAACTTGAGTGATACACTCAAAAAATACAACCCTGTTTACAAGAAAGTTCCTGTTTTTATTCATAATGATAAGCCCATATCTGAGTCACTTGTGATTCTTGAGTATATTGATGAGACTTGGAAACAAAATCCAATCTTACCTTCTGATCCTTACAAAAGAGCCTTGACTCGTTTCTGGACCAAGTTCATAGATGACAAGTGTTTGAGTGGTGTACTGAAAGCTTGTTACACTCTTGATGAGAAAGAACGTGAGAAGAGTATTGAGGAAACAAAAGAGGCTCTTCAATTTCTTGAGAATGAGCTCAAGGACAAATTCTTTGGTGGGGAGGAGATTGGCTTTGTTGACATTGCTGCCGTACTCATAGCTTTTTGGATTCCTGTTATACAAGAAGCATTTGGACTGAAATTATTCACTAGTGAAGAATTTCCAAAGCTTTACATTTGGAGCCAAGAATTCAACAATCACCCAATTGTCAAGGAAAAACTGCCTCCTAGAGAGACCCTTTTGGCCTTCTACAAAGCTCGTTATGAAAGTCATTTTGGTTCAAAATAG
Protein sequence

>Msa1150770

MASNREEVKVFGLVESPFVTRVEIALKLKGVEYKYEKEKFRNLSDTLKKYNPVYKKVPVFIHNDKPISESLVILEYIDETWKQNPILPSDPYKRALTRFWTKFIDDKCLSGVLKACYTLDEKEREKSIEETKEALQFLENELKDKFFGGEEIGFVDIAAVLIAFWIPVIQEAFGLKLFTSEEFPKLYIWSQEFNNHPIVKEKLPPRETLLAFYKARYESHFGSK*