AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1152260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1152260 MtrunA17_Chr7g0242291 75.871 373 43 1 228 553 21 393 0.0 550
Msa1152260 MtrunA17_Chr7g0242291 94.512 164 6 1 70 230 225 388 6.53e-104 318
Msa1152260 MtrunA17_Chr7g0242291 74.257 101 18 1 1 93 1 101 1.11e-37 143
Msa1152260 MtrunA17_Chr7g0242301 85.538 325 33 1 243 553 1 325 0.0 531
Msa1152260 MtrunA17_Chr7g0242301 70.122 164 19 2 70 233 190 323 6.57e-69 225
Msa1152260 MtrunA17_Chr7g0242301 85.366 41 5 1 36 76 1 40 2.83e-14 74.3
Msa1152260 MtrunA17_Chr3g0125911 42.857 371 161 5 230 553 12 378 1.84e-99 306
Msa1152260 MtrunA17_Chr3g0125911 44.578 166 88 2 71 233 212 376 1.85e-44 161
Msa1152260 MtrunA17_Chr3g0125911 53.448 58 27 0 12 69 1 58 5.61e-13 70.9
Msa1152260 MtrunA17_Chr3g0125961 42.588 371 162 5 230 553 12 378 2.57e-99 305
Msa1152260 MtrunA17_Chr3g0125961 44.578 166 88 2 71 233 212 376 2.31e-44 161
Msa1152260 MtrunA17_Chr3g0125961 51.724 58 28 0 12 69 1 58 1.30e-12 69.7
Msa1152260 MtrunA17_Chr3g0125941 42.935 368 159 5 233 553 16 379 2.00e-98 303
Msa1152260 MtrunA17_Chr3g0125941 44.578 166 88 2 71 233 213 377 2.75e-44 161
Msa1152260 MtrunA17_Chr3g0125941 52.727 55 26 0 15 69 5 59 1.46e-11 66.2
Msa1152260 MtrunA17_Chr7g0262421 43.617 376 155 6 228 553 11 379 7.52e-98 302
Msa1152260 MtrunA17_Chr7g0262421 49.405 168 81 2 70 234 212 378 5.51e-50 176
Msa1152260 MtrunA17_Chr7g0262421 54.098 61 28 0 13 73 3 63 4.17e-14 74.3
Msa1152260 MtrunA17_Chr1g0183131 42.819 376 158 6 228 553 9 377 1.58e-97 301
Msa1152260 MtrunA17_Chr1g0183131 47.024 168 85 2 70 234 210 376 9.60e-46 165
Msa1152260 MtrunA17_Chr1g0183131 54.237 59 27 0 15 73 3 61 3.78e-14 74.3
Msa1152260 MtrunA17_Chr6g0478081 41.935 372 163 4 228 553 11 375 7.75e-96 296
Msa1152260 MtrunA17_Chr6g0478081 44.118 170 85 4 70 233 208 373 1.75e-39 148
Msa1152260 MtrunA17_Chr6g0478081 52.727 55 26 0 13 67 3 57 4.04e-12 68.2
Msa1152260 MtrunA17_Chr5g0440521 41.129 372 168 4 230 553 21 389 4.39e-93 290
Msa1152260 MtrunA17_Chr5g0440521 47.929 169 82 4 70 233 220 387 1.32e-40 151
Msa1152260 MtrunA17_Chr5g0440521 52.000 50 24 0 18 67 16 65 3.47e-11 65.1
Msa1152260 MtrunA17_Chr3g0132351 42.257 381 163 7 226 553 13 389 1.83e-89 280
Msa1152260 MtrunA17_Chr3g0132351 48.235 170 78 5 75 237 225 391 3.62e-41 153
Msa1152260 MtrunA17_Chr3g0132351 53.704 54 25 0 14 67 10 63 8.04e-12 67.4
Msa1152260 MtrunA17_Chr3g0118441 39.153 378 177 5 226 553 10 384 2.99e-83 264
Msa1152260 MtrunA17_Chr3g0118441 44.970 169 87 4 70 233 215 382 5.73e-37 141
Msa1152260 MtrunA17_Chr3g0118441 59.615 52 21 0 13 64 6 57 4.93e-12 67.8
Msa1152260 MtrunA17_Chr5g0419681 37.892 351 164 7 238 541 19 362 8.42e-69 226
Msa1152260 MtrunA17_Chr5g0419681 41.139 158 87 4 70 223 207 362 2.57e-26 110
Msa1152260 MtrunA17_Chr4g0021211 37.143 350 167 6 238 541 44 386 3.08e-68 225
Msa1152260 MtrunA17_Chr4g0021211 40.909 154 86 3 73 223 235 386 1.20e-25 109
Msa1152260 MtrunA17_Chr4g0021211 56.863 51 22 0 18 68 31 81 4.08e-11 65.1
Msa1152260 MtrunA17_Chr3g0118431 39.194 273 116 3 320 544 19 289 2.17e-54 186
Msa1152260 MtrunA17_Chr3g0118431 46.296 162 81 4 70 226 129 289 1.42e-35 135
Msa1152260 MtrunA17_Chr8g0385221 26.685 371 209 12 229 545 54 415 3.86e-21 96.3
Msa1152260 MtrunA17_Chr1g0157021 33.898 118 71 3 255 366 38 154 1.07e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1152260 AT1G32780.1 57.218 381 106 5 228 553 10 388 6.33e-146 426
Msa1152260 AT1G32780.1 70.122 164 45 2 70 230 221 383 2.05e-72 236
Msa1152260 AT1G32780.1 63.077 65 23 1 12 76 1 64 1.75e-18 88.2
Msa1152260 AT1G64710.1 52.957 372 125 4 230 553 11 380 2.28e-135 398
Msa1152260 AT1G64710.1 61.078 167 61 2 70 233 213 378 1.06e-63 213
Msa1152260 AT1G64710.1 69.841 63 18 1 14 76 2 63 2.46e-20 93.6
Msa1152260 AT1G64710.2 52.925 359 119 4 243 553 1 357 3.73e-131 387
Msa1152260 AT1G64710.2 61.078 167 61 2 70 233 190 355 6.02e-64 213
Msa1152260 AT1G77120.1 44.744 371 154 6 230 553 11 377 5.63e-100 308
Msa1152260 AT1G77120.1 43.373 166 90 2 71 233 211 375 1.90e-42 156
Msa1152260 AT1G77120.1 58.182 55 23 0 15 69 3 57 2.57e-13 72.0
Msa1152260 AT5G43940.1 44.652 374 150 6 228 551 9 375 1.38e-99 306
Msa1152260 AT5G43940.1 48.171 164 81 2 70 230 210 372 4.06e-46 166
Msa1152260 AT5G43940.1 59.322 59 24 0 15 73 3 61 1.29e-15 79.3
Msa1152260 AT5G43940.2 45.283 371 146 6 231 551 24 387 3.48e-99 306
Msa1152260 AT5G43940.2 48.171 164 81 2 70 230 222 384 7.60e-46 166
Msa1152260 AT5G43940.2 47.887 71 25 1 15 73 3 73 2.68e-12 69.3
Msa1152260 AT1G64710.3 50.325 308 103 4 294 553 6 311 1.81e-98 301
Msa1152260 AT1G64710.3 61.078 167 61 2 70 233 144 309 1.33e-64 213
Msa1152260 AT5G24760.1 43.750 368 152 5 233 553 20 379 4.78e-98 303
Msa1152260 AT5G24760.1 46.951 164 83 2 70 230 212 374 7.05e-41 152
Msa1152260 AT5G24760.1 51.923 52 25 0 18 69 12 63 1.87e-11 66.6
Msa1152260 AT4G22110.2 44.709 378 157 4 226 553 12 387 1.03e-94 294
Msa1152260 AT4G22110.2 52.121 165 74 3 70 230 219 382 2.35e-40 151
Msa1152260 AT4G22110.2 56.667 60 26 0 16 75 11 70 3.60e-12 68.6
Msa1152260 AT4G22110.1 44.709 378 157 4 226 553 12 387 1.03e-94 294
Msa1152260 AT4G22110.1 52.121 165 74 3 70 230 219 382 2.35e-40 151
Msa1152260 AT4G22110.1 56.667 60 26 0 16 75 11 70 3.60e-12 68.6
Msa1152260 AT1G22430.2 45.187 374 151 5 230 553 17 386 3.01e-94 293
Msa1152260 AT1G22430.2 53.333 165 72 3 70 230 218 381 3.31e-42 156
Msa1152260 AT1G22430.2 60.714 56 22 0 12 67 6 61 7.86e-14 73.9
Msa1152260 AT1G22430.1 45.187 374 151 5 230 553 17 386 3.01e-94 293
Msa1152260 AT1G22430.1 53.333 165 72 3 70 230 218 381 3.31e-42 156
Msa1152260 AT1G22430.1 60.714 56 22 0 12 67 6 61 7.86e-14 73.9
Msa1152260 AT5G24760.2 43.017 358 149 5 243 553 1 350 1.01e-93 290
Msa1152260 AT5G24760.2 46.951 164 83 2 70 230 183 345 5.80e-41 152
Msa1152260 AT5G24760.3 43.017 358 149 5 243 553 1 350 1.01e-93 290
Msa1152260 AT5G24760.3 46.951 164 83 2 70 230 183 345 5.80e-41 152
Msa1152260 AT5G42250.1 39.733 375 170 6 230 553 20 389 2.14e-89 281
Msa1152260 AT5G42250.1 44.578 166 86 4 70 230 220 384 6.77e-36 139
Msa1152260 AT5G42250.1 48.611 72 35 1 8 77 3 74 7.60e-14 73.9
Msa1152260 AT1G22440.1 41.005 378 171 4 226 553 9 384 6.79e-86 271
Msa1152260 AT1G22440.1 46.429 168 85 3 70 233 216 382 2.19e-37 142
Msa1152260 AT1G22440.1 54.545 66 30 0 10 75 2 67 3.78e-14 74.7
Msa1152260 AT1G22430.3 43.060 281 110 3 228 460 15 293 3.33e-65 215
Msa1152260 AT1G22430.3 61.039 77 28 2 70 145 218 293 9.64e-20 90.9
Msa1152260 AT1G22430.3 60.714 56 22 0 12 67 6 61 4.31e-14 73.9
Msa1152260 AT1G22430.4 51.220 205 97 2 228 431 15 217 1.82e-61 204
Msa1152260 AT1G22430.4 60.714 56 22 0 12 67 6 61 3.49e-14 73.9
Msa1152260 AT1G22430.5 51.220 205 97 2 228 431 15 217 1.82e-61 204
Msa1152260 AT1G22430.5 60.714 56 22 0 12 67 6 61 3.49e-14 73.9
Msa1152260 AT4G22110.3 50.718 209 98 3 226 431 12 218 2.25e-60 201
Msa1152260 AT4G22110.3 56.667 60 26 0 16 75 11 70 1.72e-12 68.6
Msa1152260 AT5G24760.4 40.149 269 110 4 332 553 1 265 2.12e-55 187
Msa1152260 AT5G24760.4 46.667 165 84 2 69 230 97 260 5.40e-42 152
Msa1152260 AT5G63620.1 25.936 374 214 12 226 545 53 417 3.55e-22 99.8
Msa1152260 AT5G63620.2 25.668 374 215 12 226 545 53 417 1.53e-21 97.8
Msa1152260 AT5G63620.3 29.384 211 137 6 226 429 53 258 2.88e-18 86.7

Find 146 sgRNAs with CRISPR-Local

Find 666 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAGTCAGTCTTTGGTTTC+AGG 0.106831 7_4:+37548180 None:intergenic
TCTTAGAACGTTCAAATTTC+CGG 0.226370 7_4:-37555354 None:intergenic
TTGTCTTGTGAAAGGAAATA+TGG 0.240136 7_4:-37548230 None:intergenic
GGTTCTTCTGTAGCAATCTT+TGG 0.244410 7_4:+37558426 Msa1152260:CDS
GTCTGTGATTCCTAATGTTT+TGG 0.256129 7_4:-37555158 None:intergenic
CCTGTGGTATTGAATTTGTC+TGG 0.261689 7_4:-37555042 None:intergenic
TGTACAACCTCCTCAGAAAA+TGG 0.292390 7_4:+37548511 Msa1152260:CDS
TGTACAACCTCCTCAGAAAA+TGG 0.294563 7_4:+37557486 Msa1152260:CDS
ACCGGCTTCTCTTCATCCTT+TGG 0.305016 7_4:-37555190 None:intergenic
GTGGGTGAAACTATTGAAAA+AGG 0.315652 7_4:-37548203 None:intergenic
ATCTTTGGTTTAGGTGCAAT+AGG 0.335612 7_4:+37558441 Msa1152260:CDS
GTGCTCAAAGCCAAAACATT+AGG 0.343563 7_4:+37555148 Msa1152260:intron
TGTTATTGTATTAGCCTTTG+TGG 0.352510 7_4:+37557423 Msa1152260:intron
AGTAGATTCTCTACAATAGA+TGG 0.364695 7_4:+37558131 Msa1152260:CDS
ACTGTACTATTGGGAATTCA+TGG 0.365358 7_4:+37555693 Msa1152260:CDS
GAGTACACAGTGGTGGATTC+AGG 0.368035 7_4:+37558194 Msa1152260:CDS
TTGGGGATTGACTGTACTAT+TGG 0.373454 7_4:+37555683 Msa1152260:CDS
TGCATTACCAAGGGTTCTCC+TGG 0.377736 7_4:-37557454 None:intergenic
AAGACATCTCAGTGACTTCC+CGG 0.378288 7_4:-37559960 None:intergenic
TTCCCTTTGTCTCACTTAAG+TGG 0.380570 7_4:-37548295 None:intergenic
AAAATCGAAGGATCGGTCTT+TGG 0.382992 7_4:+37559725 Msa1152260:CDS
TCTGTAGCAATCTTTGGTTT+AGG 0.386862 7_4:+37558432 Msa1152260:CDS
GCGTTCGATCTCTTGATTGC+AGG 0.400200 7_4:+37555984 Msa1152260:CDS
ATTCGTACCCGGAAGCTTCA+TGG 0.413281 7_4:-37557713 None:intergenic
CGGCCATCAAAGAGCTCCAT+TGG 0.419924 7_4:-37559701 None:intergenic
TGGGGATTGACTGTACTATT+GGG 0.420562 7_4:+37555684 Msa1152260:CDS
GTAGGATTGTGGAGAGTGTA+GGG 0.426096 7_4:+37557958 Msa1152260:intron
CACCCAATGGAGCTCTTTGA+TGG 0.428932 7_4:+37559698 Msa1152260:CDS
GCCTTTGTGGCAAATGCTCC+AGG 0.432392 7_4:+37557436 Msa1152260:intron
AAGTGGTGCTAATATTCAAC+GGG 0.436433 7_4:+37558012 Msa1152260:CDS
TGTGACAAATGGAAGTATAT+AGG 0.438272 7_4:-37548550 None:intergenic
AGAATTTGTTCCACTACAAA+GGG 0.439017 7_4:-37548488 None:intergenic
CACCCGATGGAGCTCTTTGA+TGG 0.443825 7_4:+37555738 Msa1152260:CDS
TCCACTACAAAGGGTTCTCC+TGG 0.444615 7_4:-37548479 None:intergenic
TCTTTGGTTTAGGTGCAATA+GGG 0.448731 7_4:+37558442 Msa1152260:CDS
AGAATCGAAGGTTCGGTGTT+CGG 0.449330 7_4:+37555765 Msa1152260:CDS
ACTGAGATCGGTGTGACAAA+TGG 0.452624 7_4:-37557536 None:intergenic
ATGCATTCTGTGGCAAGATT+AGG 0.465959 7_4:-37555813 None:intergenic
ATGCATTCTGTGGCAAGATT+AGG 0.465959 7_4:-37559773 None:intergenic
CTGTGGTATTGAATTTGTCT+GGG 0.470315 7_4:-37555041 None:intergenic
ACCAACATGTGTGAGAAGTA+TGG 0.472304 7_4:+37558071 Msa1152260:CDS
TGTAGGATTGTGGAGAGTGT+AGG 0.472961 7_4:+37557957 Msa1152260:intron
TTGGGGATTGACTGTACTAC+TGG 0.477884 7_4:+37559643 Msa1152260:CDS
TTTAATTCTTGTCTTGTGAA+AGG 0.478412 7_4:-37548238 None:intergenic
AAAGAGCTCCATCGGGTGGA+TGG 0.480463 7_4:-37555733 None:intergenic
GGCTTTGTTTATCTCGTCAA+AGG 0.484785 7_4:-37559921 None:intergenic
GGGTGGATGGGAAGCAACTT+TGG 0.487545 7_4:-37555720 None:intergenic
CGACCATCAAAGAGCTCCAT+CGG 0.489430 7_4:-37555741 None:intergenic
CTTAGTTGTGGAGTTTCCAC+AGG 0.494020 7_4:+37558272 Msa1152260:CDS
AAGAATTTGTTCCACTACAA+AGG 0.494916 7_4:-37548489 None:intergenic
CTACCTACCTTTGCAAGTAA+TGG 0.503735 7_4:-37548321 None:intergenic
ACTGAGATCAGTGTGACAAA+TGG 0.504154 7_4:-37548561 None:intergenic
AAACTCACCTTGCTTAGTTG+TGG 0.504966 7_4:+37558260 Msa1152260:CDS
GCCTTTCCAACCACTGAGAT+CGG 0.504977 7_4:-37557548 None:intergenic
AGACAAGAATTAAAAGAAGA+TGG 0.505357 7_4:+37548247 Msa1152260:exon
CAATCAAGAGATCGAACGCT+TGG 0.506378 7_4:-37555980 None:intergenic
TTGCCACAGAATGCATGAAA+GGG 0.506811 7_4:+37555820 Msa1152260:CDS
TTGCCACAGAATGCATGAAA+GGG 0.506811 7_4:+37559780 Msa1152260:CDS
GCTGCTGTGGCACATGGTCC+AGG 0.509304 7_4:+37548461 Msa1152260:intron
CGCTTGGTTTATCTCGTCAA+AGG 0.512734 7_4:-37555964 None:intergenic
ATGAATTTGTTGCATTACCA+AGG 0.515147 7_4:-37557464 None:intergenic
TCGGTCTTTGGAGGTTTCAA+AGG 0.516366 7_4:+37559737 Msa1152260:CDS
TTCCTTCTTGTCCTGTCATG+AGG 0.517426 7_4:+37559534 Msa1152260:CDS
AACTTGGGTCAGGTTGCAGA+AGG 0.521661 7_4:+37554973 Msa1152260:intron
GTATTAGCTGCTGTGGCACA+TGG 0.524288 7_4:+37548455 Msa1152260:intron
TCCAAAGGATGAAGAGAAGC+CGG 0.524825 7_4:+37555189 Msa1152260:CDS
ACCATACTTCTCACACATGT+TGG 0.526918 7_4:-37558072 None:intergenic
GGGTGGAGAGGAAGTAACTT+TGG 0.528694 7_4:-37559680 None:intergenic
CTTGGGTCAGGTTGCAGAAG+GGG 0.532137 7_4:+37554975 Msa1152260:intron
CGTTCGATCTCTTGATTGCA+GGG 0.533940 7_4:+37555985 Msa1152260:CDS
CATTCTCTATATCTAAATGT+TGG 0.534429 7_4:-37560158 None:intergenic
CTTGCCACAGAATGCATGAA+AGG 0.536757 7_4:+37555819 Msa1152260:CDS
CTTGCCACAGAATGCATGAA+AGG 0.536757 7_4:+37559779 Msa1152260:CDS
ATGTAGGAATTGGAGCTGCT+TGG 0.539264 7_4:+37558382 Msa1152260:intron
GCAACTTCAGAAGTTGCAAA+TGG 0.539401 7_4:+37548269 Msa1152260:CDS
GCTTGGTTTATCTCGTCAAA+GGG 0.540633 7_4:-37555963 None:intergenic
ATCGAAGGATCGGTCTTTGG+AGG 0.541756 7_4:+37559728 Msa1152260:CDS
AATTGTATAATGCAGGGTTG+GGG 0.543938 7_4:+37559626 Msa1152260:intron
ATCGAAGGTTCGGTGTTCGG+AGG 0.546601 7_4:+37555768 Msa1152260:CDS
TGAATTTGTTGCATTACCAA+GGG 0.546922 7_4:-37557463 None:intergenic
TCCTGGAGCATTTGCCACAA+AGG 0.548305 7_4:-37557437 None:intergenic
GGCCATCAAAGAGCTCCATT+GGG 0.551117 7_4:-37559700 None:intergenic
TGTGACAAATGGAAGTATAG+AGG 0.551460 7_4:-37557525 None:intergenic
TGGTCGCAGAATCGAAGGTT+CGG 0.551474 7_4:+37555758 Msa1152260:CDS
ACCGATCTCAGTGGTTGGAA+AGG 0.553026 7_4:+37557547 Msa1152260:CDS
TCGGTGTTCGGAGGTTTCAA+AGG 0.553116 7_4:+37555777 Msa1152260:CDS
AAATGCTCCAGGAGAACCCT+TGG 0.553640 7_4:+37557447 Msa1152260:CDS
CAGAGAATCAGAGAAATGAC+TGG 0.554058 7_4:+37559457 Msa1152260:intron
AAGAGCTCCATCGGGTGGAT+GGG 0.555389 7_4:-37555732 None:intergenic
GCTTTGTTTATCTCGTCAAA+GGG 0.557660 7_4:-37559920 None:intergenic
TACCCCTTTCATGCATTCTG+TGG 0.558507 7_4:-37555823 None:intergenic
TACCCCTTTCATGCATTCTG+TGG 0.558507 7_4:-37559783 None:intergenic
GTCACACTGATCTCAGTGGT+TGG 0.560551 7_4:+37548567 Msa1152260:CDS
GACCATCAAAGAGCTCCATC+GGG 0.563032 7_4:-37555740 None:intergenic
ACTGATCTCAGTGGTTGGAA+AGG 0.564267 7_4:+37548572 Msa1152260:CDS
AAGTTGAAGAGTTCAAGAAA+TGG 0.565220 7_4:-37558166 None:intergenic
TTTGATGGTCGCAGAATCGA+AGG 0.568190 7_4:+37555753 Msa1152260:CDS
CTAATATTCAACGGGGAGTG+TGG 0.570878 7_4:+37558020 Msa1152260:CDS
GGAAAGACCATTACTTGCAA+AGG 0.572082 7_4:+37548314 Msa1152260:CDS
GTCACACCGATCTCAGTGGT+TGG 0.575089 7_4:+37557542 Msa1152260:CDS
GCAGAAGGGGCACGAGCCAG+AGG 0.577664 7_4:+37554988 Msa1152260:CDS
TAAATTATATACCTCATGAC+AGG 0.578734 7_4:-37559545 None:intergenic
ATTGTGGAGAGTGTAGGGGA+AGG 0.579424 7_4:+37557963 Msa1152260:CDS
CCAGACAAATTCAATACCAC+AGG 0.583734 7_4:+37555042 Msa1152260:CDS
CAACCACTTAAGTGAGACAA+AGG 0.588680 7_4:+37548292 Msa1152260:CDS
CACAGACTTCATAAATCCAA+AGG 0.589396 7_4:+37555174 Msa1152260:CDS
AAGAGCTCCATTGGGTGGAG+AGG 0.590631 7_4:-37559692 None:intergenic
AGAGAATCAGAGAAATGACT+GGG 0.592679 7_4:+37559458 Msa1152260:intron
TGAAAGGAAATATGGATAGG+TGG 0.592899 7_4:-37548222 None:intergenic
GTTACTTCCTCTCCACCCAA+TGG 0.594383 7_4:+37559685 Msa1152260:CDS
TACCTCATGACAGGACAAGA+AGG 0.596837 7_4:-37559536 None:intergenic
GTTGCTTCCCATCCACCCGA+TGG 0.597342 7_4:+37555725 Msa1152260:CDS
GAAAGGAAATATGGATAGGT+GGG 0.597590 7_4:-37548221 None:intergenic
ATCAGAGAAATGACTGAAGG+AGG 0.600126 7_4:+37555308 Msa1152260:CDS
TTTGATGGCCGCAAAATCGA+AGG 0.602335 7_4:+37559713 Msa1152260:CDS
TAGGATTGTGGAGAGTGTAG+GGG 0.604363 7_4:+37557959 Msa1152260:intron
CCCGGCAATCAAAAGATCGA+AGG 0.604920 7_4:-37559942 None:intergenic
TGGGGATTGACTGTACTACT+GGG 0.605656 7_4:+37559644 Msa1152260:CDS
AACCACTTAAGTGAGACAAA+GGG 0.605703 7_4:+37548293 Msa1152260:CDS
ATAATCAGAGAAATGACTGA+AGG 0.605943 7_4:+37555305 Msa1152260:CDS
CATCAAAGAGCTCCATCGGG+TGG 0.612111 7_4:-37555737 None:intergenic
ACTTGGGTCAGGTTGCAGAA+GGG 0.614461 7_4:+37554974 Msa1152260:intron
TCCAGGAGAACCCTTTGTAG+TGG 0.614887 7_4:+37548478 Msa1152260:CDS
CTTAAAAGAAAATGACAAAG+TGG 0.617928 7_4:+37557995 Msa1152260:CDS
CATCAAAGAGCTCCATTGGG+TGG 0.622133 7_4:-37559697 None:intergenic
GGAAACTCCACAACTAAGCA+AGG 0.622794 7_4:-37558267 None:intergenic
ATTTGTCACACTGATCTCAG+TGG 0.626164 7_4:+37548563 Msa1152260:CDS
TGGCCGCAAAATCGAAGGAT+CGG 0.626280 7_4:+37559718 Msa1152260:CDS
AAAGTGGTGCTAATATTCAA+CGG 0.627186 7_4:+37558011 Msa1152260:CDS
TTTCACTGAGTACACAGTGG+TGG 0.644223 7_4:+37558187 Msa1152260:CDS
AATAATGCTAATGTGCATGC+TGG 0.646212 7_4:+37558405 Msa1152260:CDS
TGAAGAGAAGCCGGTATACG+AGG 0.647999 7_4:+37555198 Msa1152260:CDS
ATTTGTCACACCGATCTCAG+TGG 0.650521 7_4:+37557538 Msa1152260:CDS
TTGTGAAAGGAAATATGGAT+AGG 0.654318 7_4:-37548225 None:intergenic
TGCCACAGAATGCATGAAAG+GGG 0.655237 7_4:+37555821 Msa1152260:CDS
TGCCACAGAATGCATGAAAG+GGG 0.655237 7_4:+37559781 Msa1152260:CDS
TCTCAGTGGTTGGAAAGGAG+AGG 0.655831 7_4:+37548577 Msa1152260:CDS
TCTCAGTGGTTGGAAAGGCG+AGG 0.664563 7_4:+37557552 Msa1152260:CDS
GAGAATCAGAGAAATGACTG+GGG 0.687287 7_4:+37559459 Msa1152260:intron
ATGAAGAGACTAATGTGTGA+TGG 0.689352 7_4:+37558104 Msa1152260:CDS
ATCCGAGGAAAAGCACGTTG+AGG 0.697016 7_4:-37557684 None:intergenic
AGAATCAGAGAAATGACTGG+GGG 0.700621 7_4:+37559460 Msa1152260:CDS
ACAACCTCCTCAGAAAATGG+AGG 0.703186 7_4:+37548514 Msa1152260:CDS
ACAACCTCCTCAGAAAATGG+AGG 0.703186 7_4:+37557489 Msa1152260:CDS
AACTTTCACTGAGTACACAG+TGG 0.735925 7_4:+37558184 Msa1152260:CDS
AGTGGTGCTAATATTCAACG+GGG 0.821851 7_4:+37558013 Msa1152260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAATTAGAAACTATA+TGG - chr7_4:37548654-37548673 None:intergenic 10.0%
!! TATATAAAAATTCAATTTGA+TGG + chr7_4:37548926-37548945 Msa1152260:intron 10.0%
!! AACTATAATAATTAATAACA+TGG - chr7_4:37550267-37550286 None:intergenic 10.0%
!! ATTATAGTTATAATTAAGAT+TGG + chr7_4:37550278-37550297 Msa1152260:intron 10.0%
!!! ATTATTTTCTTTTATTTTGA+AGG - chr7_4:37550674-37550693 None:intergenic 10.0%
!! ATATCTTTCAAAAAAAAAAA+TGG - chr7_4:37550975-37550994 None:intergenic 10.0%
!!! AAAAGCTTTTTTTTTTATTA+AGG + chr7_4:37551502-37551521 Msa1152260:intron 10.0%
!!! AAAGCTTTTTTTTTTATTAA+GGG + chr7_4:37551503-37551522 Msa1152260:intron 10.0%
!!! ATTTTTTTTTCAAAAAAATG+TGG - chr7_4:37552977-37552996 None:intergenic 10.0%
!!! CATTTTTTTGAAAAAAAAAT+TGG + chr7_4:37552977-37552996 Msa1152260:intron 10.0%
!!! TTTTTTTGAAAAAAAAATTG+GGG + chr7_4:37552979-37552998 Msa1152260:intron 10.0%
!!! TGAAATAAAATATATTTTTG+AGG + chr7_4:37553404-37553423 Msa1152260:intron 10.0%
!! AAGATAATGTTAATAATTAA+TGG + chr7_4:37553822-37553841 Msa1152260:intron 10.0%
!!! TATATTCTTCTATTATTTTT+AGG + chr7_4:37555905-37555924 Msa1152260:intron 10.0%
!! ATGTAAAAATGAAAAAAATA+TGG + chr7_4:37556292-37556311 Msa1152260:intron 10.0%
!! AAATTAAAAAGCAATTAAAA+AGG + chr7_4:37558724-37558743 Msa1152260:intron 10.0%
!! AATTAAAAAGCAATTAAAAA+GGG + chr7_4:37558725-37558744 Msa1152260:intron 10.0%
!!! AGATTTTTATAAATTTGTTT+TGG - chr7_4:37558978-37558997 None:intergenic 10.0%
!! AAACAAATTTATAAAAATCT+TGG + chr7_4:37558978-37558997 Msa1152260:intron 10.0%
!!! TTTTGTTAATTAGAAATACA+CGG + chr7_4:37548801-37548820 Msa1152260:intron 15.0%
!! AGAAAAATTATTTATCATAG+AGG - chr7_4:37549988-37550007 None:intergenic 15.0%
!! AAAGTGAAAAATAATGATTA+TGG - chr7_4:37550131-37550150 None:intergenic 15.0%
!! GGAAATAATTATAACTAAAA+TGG - chr7_4:37550776-37550795 None:intergenic 15.0%
!!! ATCTTTAAAAAAAAAGTAGA+TGG - chr7_4:37550797-37550816 None:intergenic 15.0%
!!! TTTTTTTTTTGAAAGATATG+AGG + chr7_4:37550976-37550995 Msa1152260:intron 15.0%
!! TTTCATTGAAGATTAAATAA+TGG + chr7_4:37551063-37551082 Msa1152260:intron 15.0%
!! ATTATAGTAAATGAAGATAT+GGG - chr7_4:37551292-37551311 None:intergenic 15.0%
!! TATTATAGTAAATGAAGATA+TGG - chr7_4:37551293-37551312 None:intergenic 15.0%
!! TATCTTCATTTACTATAATA+AGG + chr7_4:37551293-37551312 Msa1152260:intron 15.0%
!!! TTTTTTTTTATTAAGGGAAA+TGG + chr7_4:37551509-37551528 Msa1152260:intron 15.0%
!!! TATTAGATTTTGCTAATTTT+TGG + chr7_4:37551545-37551564 Msa1152260:intron 15.0%
!!! AATTTGATATAATTTTTTGC+AGG + chr7_4:37551582-37551601 Msa1152260:intron 15.0%
!! TATTTATGAAAAAAACATGA+CGG - chr7_4:37551646-37551665 None:intergenic 15.0%
!!! AAAAATGTGGATTTTTTTTA+CGG - chr7_4:37552964-37552983 None:intergenic 15.0%
!!! TGTCGTAATATTTTTTTTTA+TGG + chr7_4:37553712-37553731 Msa1152260:intron 15.0%
!!! TTTAAGATAATATACTCATA+TGG - chr7_4:37553796-37553815 None:intergenic 15.0%
!! ATATGAGTATATTATCTTAA+AGG + chr7_4:37553795-37553814 Msa1152260:intron 15.0%
!!! TAAAACTTTTAAAACTTTCA+AGG - chr7_4:37554148-37554167 None:intergenic 15.0%
!!! GATTTTTATGAATTTGTTTT+TGG - chr7_4:37554928-37554947 None:intergenic 15.0%
!! AAACAAATTCATAAAAATCT+TGG + chr7_4:37554929-37554948 Msa1152260:intron 15.0%
!!! AATATTTTCTTTTGTGAAAT+GGG - chr7_4:37555240-37555259 None:intergenic 15.0%
!!! TAATATTTTCTTTTGTGAAA+TGG - chr7_4:37555241-37555260 None:intergenic 15.0%
!!! TAATTTTTTTTGTATAATGC+AGG + chr7_4:37555659-37555678 Msa1152260:intron 15.0%
!!! AATTTTTTTTGTATAATGCA+GGG + chr7_4:37555660-37555679 Msa1152260:intron 15.0%
!!! TTGTATAAAGTTGATTTTTA+GGG - chr7_4:37556481-37556500 None:intergenic 15.0%
!!! TTTGTATAAAGTTGATTTTT+AGG - chr7_4:37556482-37556501 None:intergenic 15.0%
!! ATAAAATAAGTATTATCCTA+AGG - chr7_4:37557859-37557878 None:intergenic 15.0%
!!! ATAGAACATATTTTTTTTGT+AGG + chr7_4:37557940-37557959 Msa1152260:intron 15.0%
!!! AAATTTGTTTAATTTATTCG+TGG + chr7_4:37558340-37558359 Msa1152260:intron 15.0%
!! TCAAAAACTAAAATAAATGT+AGG + chr7_4:37558366-37558385 Msa1152260:intron 15.0%
!!! AAAAAAATAGCTACTTTATA+TGG - chr7_4:37558497-37558516 None:intergenic 15.0%
!! TAACAACACTATTAAAATAA+AGG + chr7_4:37558792-37558811 Msa1152260:intron 15.0%
!! AACAACACTATTAAAATAAA+GGG + chr7_4:37558793-37558812 Msa1152260:intron 15.0%
!!! TTTGTTTTGGTTAATATATT+AGG - chr7_4:37558965-37558984 None:intergenic 15.0%
!! ATGAGGTATATAATTTATAT+TGG + chr7_4:37559551-37559570 Msa1152260:intron 15.0%
!!! TATATTCTTCTGTTATTTTT+AGG + chr7_4:37559862-37559881 Msa1152260:intron 15.0%
!! ATTAACAAAAGGAAATTTGT+TGG - chr7_4:37548791-37548810 None:intergenic 20.0%
!!! GTGTATTTCTAATTAACAAA+AGG - chr7_4:37548802-37548821 None:intergenic 20.0%
!! CTTGTATTGTAAAGTTAAAT+TGG - chr7_4:37548885-37548904 None:intergenic 20.0%
!! TAAAAATGAACATGATCATA+AGG - chr7_4:37548908-37548927 None:intergenic 20.0%
!! CATAATTAAGTCAACATTAT+TGG - chr7_4:37549131-37549150 None:intergenic 20.0%
!!! AAAGTGGTTTTAATATTCAA+TGG + chr7_4:37549236-37549255 Msa1152260:intron 20.0%
!! GTGTTCAAAAAATGAAAAAT+GGG - chr7_4:37549386-37549405 None:intergenic 20.0%
!! AGTGTTCAAAAAATGAAAAA+TGG - chr7_4:37549387-37549406 None:intergenic 20.0%
!!! ACTATGTAATTTTTATTGAG+TGG + chr7_4:37549584-37549603 Msa1152260:intron 20.0%
!! ATGATCTTTAGTGAAAAATT+TGG - chr7_4:37549854-37549873 None:intergenic 20.0%
!! ATTAAAATTAACGACGTAAT+TGG - chr7_4:37549898-37549917 None:intergenic 20.0%
!! CGATTATGACATTTATAATA+GGG - chr7_4:37550014-37550033 None:intergenic 20.0%
!! GATAAGTGTATATTATTAGA+TGG - chr7_4:37550105-37550124 None:intergenic 20.0%
!! TTGTTCAAAAAAACATAACA+TGG - chr7_4:37550236-37550255 None:intergenic 20.0%
!! GTAGAGATATATTATGAATT+AGG + chr7_4:37550921-37550940 Msa1152260:intron 20.0%
!!! TATTATGAATTAGGATTTTG+CGG + chr7_4:37550930-37550949 Msa1152260:intron 20.0%
!!! TATATCTTGATGGTATATAA+AGG - chr7_4:37551826-37551845 None:intergenic 20.0%
!! TACCATCAAGATATATTTAA+TGG + chr7_4:37551831-37551850 Msa1152260:intron 20.0%
!! AATAATGCCTTCAAATAAAA+TGG + chr7_4:37552092-37552111 Msa1152260:intron 20.0%
!!! TCTCAGTCTTTTTTTTAATA+AGG - chr7_4:37552126-37552145 None:intergenic 20.0%
!!! GCATTTTCTATTATCAAAAA+TGG - chr7_4:37552403-37552422 None:intergenic 20.0%
!!! ATCATTTCTTGTAGTTTTAT+AGG - chr7_4:37552611-37552630 None:intergenic 20.0%
!! ACCATAATTATAAATTTCAG+AGG + chr7_4:37552924-37552943 Msa1152260:intron 20.0%
!!! ACCTCTGAAATTTATAATTA+TGG - chr7_4:37552928-37552947 None:intergenic 20.0%
!!! ATAATTGTTTTTCAATTACG+TGG - chr7_4:37553244-37553263 None:intergenic 20.0%
!!! ATATATTTTTGAGGAATTCA+AGG + chr7_4:37553413-37553432 Msa1152260:intron 20.0%
!!! TATATTTTTGAGGAATTCAA+GGG + chr7_4:37553414-37553433 Msa1152260:intron 20.0%
!!! ATTCTTAGTCAATTTTTTAG+TGG - chr7_4:37553470-37553489 None:intergenic 20.0%
!! CATTATCGAACAATAAATAT+GGG - chr7_4:37553963-37553982 None:intergenic 20.0%
!! ACATTATCGAACAATAAATA+TGG - chr7_4:37553964-37553983 None:intergenic 20.0%
!! TGTACTATTAAACCTAAATT+GGG - chr7_4:37554053-37554072 None:intergenic 20.0%
!! ATGTACTATTAAACCTAAAT+TGG - chr7_4:37554054-37554073 None:intergenic 20.0%
!! TTTAATAGTACATCTCAATA+GGG + chr7_4:37554061-37554080 Msa1152260:intron 20.0%
!!! AAATGCAAACTAAGTTTTTT+TGG - chr7_4:37554293-37554312 None:intergenic 20.0%
!! GTAGAGTTGTATTTATATAA+TGG + chr7_4:37554317-37554336 Msa1152260:intron 20.0%
!! GTTTAAACACAAATAAATGT+AGG + chr7_4:37554626-37554645 Msa1152260:intron 20.0%
!!! TTAATTTGATTTCAAGAGTT+AGG + chr7_4:37555081-37555100 Msa1152260:intron 20.0%
!!! TTTCCTTTTCTTTTAAAACT+CGG + chr7_4:37555455-37555474 Msa1152260:intron 20.0%
!!! TTTTAGGGAAACATTTAAAA+TGG - chr7_4:37556466-37556485 None:intergenic 20.0%
!!! AATTATGTTGATGTTTTCTT+AGG - chr7_4:37556512-37556531 None:intergenic 20.0%
!!! AATGGCTATTCTATTTTTTT+TGG + chr7_4:37556608-37556627 Msa1152260:intron 20.0%
!! AAAGTGTAAAATGTGTAAAA+TGG - chr7_4:37556652-37556671 None:intergenic 20.0%
!!! TTTTACACATTTTACACTTT+AGG + chr7_4:37556652-37556671 Msa1152260:intron 20.0%
!!! ATATTTTTTTTGTAGGATTG+TGG + chr7_4:37557947-37557966 Msa1152260:intron 20.0%
!! ACTAAAATAAATGTAGGAAT+TGG + chr7_4:37558372-37558391 Msa1152260:intron 20.0%
!! TTGGTTAATATATTAGGTAT+TGG - chr7_4:37558959-37558978 None:intergenic 20.0%
!! TCTTTATTATTACAAGAGTT+AGG + chr7_4:37559189-37559208 Msa1152260:intron 20.0%
! TTTAATTCTTGTCTTGTGAA+AGG - chr7_4:37548241-37548260 None:intergenic 25.0%
! AGACAAGAATTAAAAGAAGA+TGG + chr7_4:37548247-37548266 Msa1152260:exon 25.0%
!! GGTATAAAAATTTTCTTACC+CGG - chr7_4:37548770-37548789 None:intergenic 25.0%
! TTGTTCGATGAAGATTATAT+AGG + chr7_4:37548843-37548862 Msa1152260:intron 25.0%
! CAACTATTCAATTCATCAAA+TGG + chr7_4:37548960-37548979 Msa1152260:intron 25.0%
! TACAAAAAAATCAAGGTCAT+TGG - chr7_4:37549166-37549185 None:intergenic 25.0%
!!! AATGACCTTGATTTTTTTGT+AGG + chr7_4:37549165-37549184 Msa1152260:intron 25.0%
!!! ATGACCTTGATTTTTTTGTA+GGG + chr7_4:37549166-37549185 Msa1152260:intron 25.0%
!! AGTAGATTTTCTTCAATAGA+TGG + chr7_4:37549356-37549375 Msa1152260:intron 25.0%
!! AAATTTTCTCAAAAACTCCA+TGG - chr7_4:37549545-37549564 None:intergenic 25.0%
!!! CAAGTTTGTTATAAGTTAGT+TGG - chr7_4:37549752-37549771 None:intergenic 25.0%
!!! TACGTCGTTAATTTTAATCT+AGG + chr7_4:37549900-37549919 Msa1152260:intron 25.0%
! GCGATTATGACATTTATAAT+AGG - chr7_4:37550015-37550034 None:intergenic 25.0%
!!! TTTTAATTACCTGATTGGTT+TGG - chr7_4:37550454-37550473 None:intergenic 25.0%
!!! TCGTTTTTTAATTACCTGAT+TGG - chr7_4:37550459-37550478 None:intergenic 25.0%
!! AGGAATTAAAGTACCTAAAA+TGG - chr7_4:37551004-37551023 None:intergenic 25.0%
!!! TTTTAGGTACTTTAATTCCT+CGG + chr7_4:37551004-37551023 Msa1152260:intron 25.0%
!! CACAACATTAAATGTTGATT+GGG - chr7_4:37551169-37551188 None:intergenic 25.0%
! ACACAACATTAAATGTTGAT+TGG - chr7_4:37551170-37551189 None:intergenic 25.0%
!! ATTCAACTTCAAACCTTTTT+CGG + chr7_4:37551254-37551273 Msa1152260:intron 25.0%
! TAGACCACTAATTATAAAAC+TGG + chr7_4:37551754-37551773 Msa1152260:intron 25.0%
! GACCATTAAATATATCTTGA+TGG - chr7_4:37551836-37551855 None:intergenic 25.0%
! TAGATGAGTTAGAAAAGAAA+AGG + chr7_4:37551856-37551875 Msa1152260:intron 25.0%
! ATAGATGGAAACAATAGATT+TGG - chr7_4:37552175-37552194 None:intergenic 25.0%
! CGAAAAGAATAAGAAAACTT+CGG - chr7_4:37552206-37552225 None:intergenic 25.0%
! AAAAACATAAGAACTTGAGA+AGG - chr7_4:37552329-37552348 None:intergenic 25.0%
! TAATAGAAAATGCAACCATA+TGG + chr7_4:37552410-37552429 Msa1152260:intron 25.0%
! TGATGAATAATGAAATTGTG+TGG + chr7_4:37552511-37552530 Msa1152260:intron 25.0%
! GATGAATAATGAAATTGTGT+GGG + chr7_4:37552512-37552531 Msa1152260:intron 25.0%
! AATCTGATGGTTAAAATTAG+TGG + chr7_4:37552542-37552561 Msa1152260:intron 25.0%
!!! ATTTCTTGTAGTTTTATAGG+TGG - chr7_4:37552608-37552627 None:intergenic 25.0%
! TGAAATTCAAGTCAAACATA+CGG - chr7_4:37552894-37552913 None:intergenic 25.0%
!!! TGAAGTTTTGTTAATTTGTC+AGG + chr7_4:37553147-37553166 Msa1152260:intron 25.0%
!!! CGTTTGAATTTTGAGTAAAT+AGG - chr7_4:37553209-37553228 None:intergenic 25.0%
!!! GAATATGTCATTTTTTGAGT+CGG + chr7_4:37553769-37553788 Msa1152260:intron 25.0%
!! TATAAGTTCCTTGTTTACAA+AGG + chr7_4:37553860-37553879 Msa1152260:intron 25.0%
!! ATAAGTTCCTTGTTTACAAA+GGG + chr7_4:37553861-37553880 Msa1152260:intron 25.0%
! GTTTAATAGTACATCTCAAT+AGG + chr7_4:37554060-37554079 Msa1152260:intron 25.0%
! TTAATAGTACATCTCAATAG+GGG + chr7_4:37554062-37554081 Msa1152260:intron 25.0%
! ACACAAATAAATGTAGGAAT+AGG + chr7_4:37554632-37554651 Msa1152260:intron 25.0%
! CCAAGTTTGATATAAATTCA+GGG - chr7_4:37554960-37554979 None:intergenic 25.0%
! CCTGAATTTATATCAAACTT+GGG + chr7_4:37554958-37554977 Msa1152260:intron 25.0%
! TACATTTATGTTCAAGTCTT+AGG - chr7_4:37555120-37555139 None:intergenic 25.0%
! AACTATGCAAACGAAATTAT+TGG - chr7_4:37555437-37555456 None:intergenic 25.0%
!!! ATACCGAGTTTTAAAAGAAA+AGG - chr7_4:37555461-37555480 None:intergenic 25.0%
!! TTTTGCATCCTGTAAATAAA+TGG + chr7_4:37556189-37556208 Msa1152260:intron 25.0%
!! TAAATAAATGGTTCTGTTGA+AGG + chr7_4:37556201-37556220 Msa1152260:intron 25.0%
! GTAGTGACATAAATACATAA+TGG - chr7_4:37556269-37556288 None:intergenic 25.0%
!! TGAAAAAAATATGGTTTGCA+AGG + chr7_4:37556301-37556320 Msa1152260:intron 25.0%
!! GAAAAAAATATGGTTTGCAA+GGG + chr7_4:37556302-37556321 Msa1152260:intron 25.0%
!! GAAACATTTAAAATGGTGAT+GGG - chr7_4:37556459-37556478 None:intergenic 25.0%
! AAATAGAATAGCCATTTATG+AGG - chr7_4:37556604-37556623 None:intergenic 25.0%
! TGTAAAATGTGTAAAATGGA+TGG - chr7_4:37556648-37556667 None:intergenic 25.0%
! TTGTTTGTTTATTGGATTGT+AGG - chr7_4:37556691-37556710 None:intergenic 25.0%
! TACTTTGTGAACTTACTTAT+GGG - chr7_4:37556891-37556910 None:intergenic 25.0%
! ATACTTTGTGAACTTACTTA+TGG - chr7_4:37556892-37556911 None:intergenic 25.0%
! TCATATCTCACTTAATTTAG+TGG + chr7_4:37557229-37557248 Msa1152260:intron 25.0%
! AATTGATTAATGTAATCGAG+AGG - chr7_4:37557333-37557352 None:intergenic 25.0%
!! CATATAGCTTCTTATCATTT+TGG + chr7_4:37557623-37557642 Msa1152260:intron 25.0%
! TTGTGTATTTCACTAATGAA+AGG - chr7_4:37557758-37557777 None:intergenic 25.0%
! ATTAGTGAAATACACAATTG+CGG + chr7_4:37557761-37557780 Msa1152260:intron 25.0%
!!! TTTGTACTTTGAAGTTGATT+TGG - chr7_4:37557836-37557855 None:intergenic 25.0%
!! ATTATTTGGTGAATTCATAG+TGG + chr7_4:37557882-37557901 Msa1152260:intron 25.0%
! CTTAAAAGAAAATGACAAAG+TGG + chr7_4:37557995-37558014 Msa1152260:CDS 25.0%
! AGGAAATAAAAACTGTTACA+TGG - chr7_4:37558823-37558842 None:intergenic 25.0%
! ATTGTCTTAAAGAGTTATCA+AGG - chr7_4:37558843-37558862 None:intergenic 25.0%
!!! CATAGGTAACATACTTTTTA+CGG + chr7_4:37559104-37559123 Msa1152260:intron 25.0%
!!! ATAGGTAACATACTTTTTAC+GGG + chr7_4:37559105-37559124 Msa1152260:intron 25.0%
! CAAATTATAAAGTCACATCA+GGG - chr7_4:37559259-37559278 None:intergenic 25.0%
! TAAATTATATACCTCATGAC+AGG - chr7_4:37559548-37559567 None:intergenic 25.0%
! TATGTCAAATTGTATAATGC+AGG + chr7_4:37559619-37559638 Msa1152260:intron 25.0%
! ATGTCAAATTGTATAATGCA+GGG + chr7_4:37559620-37559639 Msa1152260:intron 25.0%
!!! TTATTTTTAGGCGATAAAGT+TGG + chr7_4:37559874-37559893 Msa1152260:intron 25.0%
TTGTGAAAGGAAATATGGAT+AGG - chr7_4:37548228-37548247 None:intergenic 30.0%
TTGTCTTGTGAAAGGAAATA+TGG - chr7_4:37548233-37548252 None:intergenic 30.0%
AAGAAAGTGATGAGAAAGTT+TGG - chr7_4:37548395-37548414 None:intergenic 30.0%
! AGAATTTGTTCCACTACAAA+GGG - chr7_4:37548491-37548510 None:intergenic 30.0%
! AAGAATTTGTTCCACTACAA+AGG - chr7_4:37548492-37548511 None:intergenic 30.0%
! TGTGACAAATGGAAGTATAT+AGG - chr7_4:37548553-37548572 None:intergenic 30.0%
ACAACCCTACAAAAAAATCA+AGG - chr7_4:37549173-37549192 None:intergenic 30.0%
!!! TTGATTTTTTTGTAGGGTTG+TGG + chr7_4:37549172-37549191 Msa1152260:intron 30.0%
CTTGAAAGAAAATGACAAAG+TGG + chr7_4:37549220-37549239 Msa1152260:intron 30.0%
TTAATATTCAATGGTGAGTG+TGG + chr7_4:37549245-37549264 Msa1152260:intron 30.0%
ATGAAGAAGTTAATGTGTGA+TGG + chr7_4:37549329-37549348 Msa1152260:intron 30.0%
TTCAACTTTCACTGAGTATA+CGG + chr7_4:37549406-37549425 Msa1152260:intron 30.0%
CCATGGTTATAAAGAAAAGA+AGG - chr7_4:37549528-37549547 None:intergenic 30.0%
! CCTTCTTTTCTTTATAACCA+TGG + chr7_4:37549525-37549544 Msa1152260:intron 30.0%
TATACCTCACCGTATATAAA+GGG - chr7_4:37549652-37549671 None:intergenic 30.0%
ACTTGATCGTAGAATTTACT+TGG - chr7_4:37549700-37549719 None:intergenic 30.0%
!!! TTTTTTAGCAAAGGAGTGTT+AGG - chr7_4:37549824-37549843 None:intergenic 30.0%
!!! GGTTGATCATTTTTTAGCAA+AGG - chr7_4:37549833-37549852 None:intergenic 30.0%
AAGATCATCATCAAAGTCAA+TGG + chr7_4:37549866-37549885 Msa1152260:intron 30.0%
ATCAAATGCCATGATAATTG+TGG + chr7_4:37550166-37550185 Msa1152260:intron 30.0%
TCAAATGCCATGATAATTGT+GGG + chr7_4:37550167-37550186 Msa1152260:intron 30.0%
!!! ACCTGTTTTTATAATGGTGT+AGG + chr7_4:37550363-37550382 Msa1152260:intron 30.0%
TCCTACACCATTATAAAAAC+AGG - chr7_4:37550367-37550386 None:intergenic 30.0%
! TTTTATAATGGTGTAGGACA+TGG + chr7_4:37550369-37550388 Msa1152260:intron 30.0%
TTCAGTTATCGTATTCCAAA+GGG + chr7_4:37550392-37550411 Msa1152260:intron 30.0%
AAACTTCCAAACAAAGTCTT+AGG - chr7_4:37550493-37550512 None:intergenic 30.0%
! TAAGACTTTGTTTGGAAGTT+TGG + chr7_4:37550492-37550511 Msa1152260:intron 30.0%
ATAACTAAAATGGTAGATCG+AGG - chr7_4:37550766-37550785 None:intergenic 30.0%
AAAAAAAAATGGAGCCTCAT+AGG - chr7_4:37550964-37550983 None:intergenic 30.0%
! GAGAGTATAGTGATATAGAA+AGG + chr7_4:37551318-37551337 Msa1152260:intron 30.0%
GAGATACACTAAAAAAAGTG+AGG + chr7_4:37551393-37551412 Msa1152260:intron 30.0%
ACCACTAATTATAAAACTGG+TGG + chr7_4:37551757-37551776 Msa1152260:intron 30.0%
!! ACCACCAGTTTTATAATTAG+TGG - chr7_4:37551761-37551780 None:intergenic 30.0%
! ATCTTGATGGTATATAAAGG+TGG - chr7_4:37551823-37551842 None:intergenic 30.0%
CTGATAAAATTGCAAGAGAT+GGG - chr7_4:37551944-37551963 None:intergenic 30.0%
TCTGATAAAATTGCAAGAGA+TGG - chr7_4:37551945-37551964 None:intergenic 30.0%
!! ATGACAGCCATTTTATTTGA+AGG - chr7_4:37552102-37552121 None:intergenic 30.0%
! AAGAGAGAGAAGAAATTTTG+TGG + chr7_4:37552446-37552465 Msa1152260:intron 30.0%
!! AGTTTTATAGGTGGATTCTA+GGG - chr7_4:37552599-37552618 None:intergenic 30.0%
!!! TAGTTTTATAGGTGGATTCT+AGG - chr7_4:37552600-37552619 None:intergenic 30.0%
TGACTAACAGAGAAAATTGA+TGG + chr7_4:37553081-37553100 Msa1152260:intron 30.0%
TAACAGAGAAAATTGATGGA+TGG + chr7_4:37553085-37553104 Msa1152260:intron 30.0%
TAACGTTATGCAATTTCGAA+AGG + chr7_4:37553119-37553138 Msa1152260:intron 30.0%
! CAAGTCAGTTTCTGAAAATT+TGG + chr7_4:37553533-37553552 Msa1152260:intron 30.0%
!!! GTTTTATTTCCCCTCTTTTA+TGG - chr7_4:37553596-37553615 None:intergenic 30.0%
CATCTCTTTCAACAAAACAT+TGG - chr7_4:37553931-37553950 None:intergenic 30.0%
AACAATAAATATGGGAGATG+TGG - chr7_4:37553955-37553974 None:intergenic 30.0%
TGTTCGATAATGTCTCAATT+CGG + chr7_4:37553971-37553990 Msa1152260:intron 30.0%
!! TGCTATACCGTAATTTTTAG+CGG + chr7_4:37554022-37554041 Msa1152260:intron 30.0%
GGTTTATCCGCTAAAAATTA+CGG - chr7_4:37554032-37554051 None:intergenic 30.0%
! GCAAACTTTTCACACAAAAA+AGG - chr7_4:37554176-37554195 None:intergenic 30.0%
!!! GCAAACTAAGTTTTTTTGGA+AGG - chr7_4:37554289-37554308 None:intergenic 30.0%
CGTTATTATACTAAGGGTTA+AGG - chr7_4:37554506-37554525 None:intergenic 30.0%
CCCTGAATTTATATCAAACT+TGG + chr7_4:37554957-37554976 Msa1152260:intron 30.0%
CCCAAGTTTGATATAAATTC+AGG - chr7_4:37554961-37554980 None:intergenic 30.0%
ATTTATATCAAACTTGGGTC+AGG + chr7_4:37554963-37554982 Msa1152260:intron 30.0%
!!! TATTATTTTTGAAGCACCTC+TGG - chr7_4:37555007-37555026 None:intergenic 30.0%
!! AGAGGTGCTTCAAAAATAAT+AGG + chr7_4:37555006-37555025 Msa1152260:CDS 30.0%
TGCTTCAAAAATAATAGGTG+TGG + chr7_4:37555011-37555030 Msa1152260:CDS 30.0%
ATAATCAGAGAAATGACTGA+AGG + chr7_4:37555305-37555324 Msa1152260:CDS 30.0%
!!! GACTATAGTTTTGAATGTAC+CGG + chr7_4:37555335-37555354 Msa1152260:CDS 30.0%
TCTTAGAACGTTCAAATTTC+CGG - chr7_4:37555357-37555376 None:intergenic 30.0%
!!! TTCTTTTAAAACTCGGTATC+CGG + chr7_4:37555462-37555481 Msa1152260:intron 30.0%
ATGACGACGAAATCTTTAAA+TGG - chr7_4:37555542-37555561 None:intergenic 30.0%
!!! TTTTTTGTATAATGCAGGGT+TGG + chr7_4:37555664-37555683 Msa1152260:intron 30.0%
! TTTTTGTATAATGCAGGGTT+GGG + chr7_4:37555665-37555684 Msa1152260:intron 30.0%
!!! TTATTTTTAGGCGATAAAGC+TGG + chr7_4:37555917-37555936 Msa1152260:intron 30.0%
GAACTCAGATATCATAAAAC+TGG - chr7_4:37556085-37556104 None:intergenic 30.0%
CAACAGAACCATTTATTTAC+AGG - chr7_4:37556200-37556219 None:intergenic 30.0%
! GGAAACATTTAAAATGGTGA+TGG - chr7_4:37556460-37556479 None:intergenic 30.0%
TATTGGATTGTAGGAATATG+AGG - chr7_4:37556682-37556701 None:intergenic 30.0%
CTCTCTACTTGTTTGTTTAT+TGG - chr7_4:37556699-37556718 None:intergenic 30.0%
CAATAAACAAACAAGTAGAG+AGG + chr7_4:37556697-37556716 Msa1152260:intron 30.0%
! AACTTTTCCCTCTCTTTTTA+TGG + chr7_4:37556769-37556788 Msa1152260:intron 30.0%
ATGAAATGCATGCAACAAAA+GGG - chr7_4:37556966-37556985 None:intergenic 30.0%
AATGAAATGCATGCAACAAA+AGG - chr7_4:37556967-37556986 None:intergenic 30.0%
! TTTCATTCAAGTAGGTCTTT+TGG + chr7_4:37556980-37556999 Msa1152260:intron 30.0%
TGGATGAAACTAATGAACAA+AGG - chr7_4:37557013-37557032 None:intergenic 30.0%
TGTGAAAACAAATTGATCGT+TGG - chr7_4:37557033-37557052 None:intergenic 30.0%
CTACTAGAATTAAAAGACGA+TGG + chr7_4:37557055-37557074 Msa1152260:intron 30.0%
! CACAAGTTAGTTTCTACTAT+TGG - chr7_4:37557269-37557288 None:intergenic 30.0%
!! TGTTATTGTATTAGCCTTTG+TGG + chr7_4:37557423-37557442 Msa1152260:intron 30.0%
!! TGAATTTGTTGCATTACCAA+GGG - chr7_4:37557466-37557485 None:intergenic 30.0%
!! ATGAATTTGTTGCATTACCA+AGG - chr7_4:37557467-37557486 None:intergenic 30.0%
CACTAATGAAAGGAAATTCA+TGG - chr7_4:37557748-37557767 None:intergenic 30.0%
AACTTCAAAGTACAAACCTT+AGG + chr7_4:37557840-37557859 Msa1152260:intron 30.0%
! AAAGTGGTGCTAATATTCAA+CGG + chr7_4:37558011-37558030 Msa1152260:CDS 30.0%
AGTAGATTCTCTACAATAGA+TGG + chr7_4:37558131-37558150 Msa1152260:CDS 30.0%
AAGTTGAAGAGTTCAAGAAA+TGG - chr7_4:37558169-37558188 None:intergenic 30.0%
GTAGACTTTCATTCAGAAAT+TGG - chr7_4:37558751-37558770 None:intergenic 30.0%
TGTTACAGCAGAAAAACAAA+TGG - chr7_4:37558777-37558796 None:intergenic 30.0%
TTGTTAGCACAAACAAATCA+TGG + chr7_4:37558904-37558923 Msa1152260:intron 30.0%
ACCCTGAATTATATTGAACT+TGG + chr7_4:37559005-37559024 Msa1152260:intron 30.0%
CCCAAGTTCAATATAATTCA+GGG - chr7_4:37559009-37559028 None:intergenic 30.0%
CCCTGAATTATATTGAACTT+GGG + chr7_4:37559006-37559025 Msa1152260:intron 30.0%
!!! TATTATTTTTGAAGCACCTC+TGG - chr7_4:37555007-37555026 None:intergenic 30.0%
!! AGAGGTGCTTCAAAAATAAT+AGG + chr7_4:37555006-37555025 Msa1152260:CDS 30.0%
TGCTTCAAAAATAATAGGTG+TGG + chr7_4:37555011-37555030 Msa1152260:CDS 30.0%
TACCTATGGTTAATTTCTCT+GGG - chr7_4:37559092-37559111 None:intergenic 30.0%
TTACCTATGGTTAATTTCTC+TGG - chr7_4:37559093-37559112 None:intergenic 30.0%
! CGTAAAAAGTATGTTACCTA+TGG - chr7_4:37559106-37559125 None:intergenic 30.0%
GCAAATTATAAAGTCACATC+AGG - chr7_4:37559260-37559279 None:intergenic 30.0%
! GTATTCTTTTGTGAAATGCA+AGG - chr7_4:37559406-37559425 None:intergenic 30.0%
! AGGAAATGTGAACGTTTTAA+GGG + chr7_4:37559510-37559529 Msa1152260:CDS 30.0%
AAATTGTATAATGCAGGGTT+GGG + chr7_4:37559625-37559644 Msa1152260:intron 30.0%
!! TTATGCAATGAGTTTTAGTG+TGG + chr7_4:37559832-37559851 Msa1152260:intron 30.0%
! GTTTTTGAACAGTACTTACA+CGG + chr7_4:37560062-37560081 Msa1152260:three_prime_UTR 30.0%
!! TCACTTCTACTTTTCTTTCT+TGG - chr7_4:37560119-37560138 None:intergenic 30.0%
GTGGGTGAAACTATTGAAAA+AGG - chr7_4:37548206-37548225 None:intergenic 35.0%
GAAAGGAAATATGGATAGGT+GGG - chr7_4:37548224-37548243 None:intergenic 35.0%
TGAAAGGAAATATGGATAGG+TGG - chr7_4:37548225-37548244 None:intergenic 35.0%
AACCACTTAAGTGAGACAAA+GGG + chr7_4:37548293-37548312 Msa1152260:CDS 35.0%
! ATTCTAACCTCCATTTTCTG+AGG - chr7_4:37548524-37548543 None:intergenic 35.0%
CGCAATAACCCCTTTATATA+CGG + chr7_4:37549640-37549659 Msa1152260:intron 35.0%
ATACCTCACCGTATATAAAG+GGG - chr7_4:37549651-37549670 None:intergenic 35.0%
GTATACCTCACCGTATATAA+AGG - chr7_4:37549653-37549672 None:intergenic 35.0%
CCATTATAAAAACAGGTAGC+AGG - chr7_4:37550360-37550379 None:intergenic 35.0%
!!! CCTGCTACCTGTTTTTATAA+TGG + chr7_4:37550357-37550376 Msa1152260:intron 35.0%
GTTCAGTTATCGTATTCCAA+AGG + chr7_4:37550391-37550410 Msa1152260:intron 35.0%
AATCTTACACCAAACCAATC+AGG + chr7_4:37550442-37550461 Msa1152260:intron 35.0%
TCATCTCCTAAGACTTTGTT+TGG + chr7_4:37550484-37550503 Msa1152260:intron 35.0%
! ACTTTGTTTGGAAGTTTGGA+AGG + chr7_4:37550496-37550515 Msa1152260:intron 35.0%
TGGGCTAAAAAAAATCGAGA+AGG + chr7_4:37550527-37550546 Msa1152260:intron 35.0%
GGGCTAAAAAAAATCGAGAA+GGG + chr7_4:37550528-37550547 Msa1152260:intron 35.0%
TTTGCGAGTTTAAAGGAGAA+GGG - chr7_4:37550560-37550579 None:intergenic 35.0%
!! AGCTTTGTTTGCGAGTTTAA+AGG - chr7_4:37550567-37550586 None:intergenic 35.0%
! AAGATATGAGGCTCCATTTT+AGG + chr7_4:37550988-37551007 Msa1152260:intron 35.0%
! TCTTCCTTTTCCTTTTCGTA+TGG + chr7_4:37551115-37551134 Msa1152260:intron 35.0%
! CTTCCTTTTCCTTTTCGTAT+GGG + chr7_4:37551116-37551135 Msa1152260:intron 35.0%
AATCCCATACGAAAAGGAAA+AGG - chr7_4:37551122-37551141 None:intergenic 35.0%
! TTTCCTTTTCGTATGGGATT+TGG + chr7_4:37551122-37551141 Msa1152260:intron 35.0%
! TTCCTTTTCGTATGGGATTT+GGG + chr7_4:37551123-37551142 Msa1152260:intron 35.0%
GCACAAAACTTAAGAGTCAA+GGG - chr7_4:37551222-37551241 None:intergenic 35.0%
TGCACAAAACTTAAGAGTCA+AGG - chr7_4:37551223-37551242 None:intergenic 35.0%
GTTTCGTTATTGACCGAAAA+AGG - chr7_4:37551270-37551289 None:intergenic 35.0%
!! GCTTTCTGAGTCTTGTTAAA+AGG + chr7_4:37551453-37551472 Msa1152260:intron 35.0%
!! TCTCTTGTAAGGATGGATTA+GGG - chr7_4:37551696-37551715 None:intergenic 35.0%
AAGATTTCGACTCTCTTGTA+AGG - chr7_4:37551707-37551726 None:intergenic 35.0%
! TTATAAAACTGGTGGTGTCT+AGG + chr7_4:37551765-37551784 Msa1152260:intron 35.0%
! TATAAAACTGGTGGTGTCTA+GGG + chr7_4:37551766-37551785 Msa1152260:intron 35.0%
ATAAAATTGCAAGAGATGGG+AGG - chr7_4:37551941-37551960 None:intergenic 35.0%
TTCAACGGTGTCTCAAATTT+GGG - chr7_4:37551981-37552000 None:intergenic 35.0%
TTTCAACGGTGTCTCAAATT+TGG - chr7_4:37551982-37552001 None:intergenic 35.0%
! ATAGTTTGTGGCAGTTTCAA+CGG - chr7_4:37551996-37552015 None:intergenic 35.0%
! TTTTTCCCCTTCCTTTCAAA+TGG + chr7_4:37552055-37552074 Msa1152260:intron 35.0%
! TTTTCCCCTTCCTTTCAAAT+GGG + chr7_4:37552056-37552075 Msa1152260:intron 35.0%
GATGGAAACAATAGATTTGG+TGG - chr7_4:37552172-37552191 None:intergenic 35.0%
ACTTCGGTGAAAAGAATAGA+TGG - chr7_4:37552190-37552209 None:intergenic 35.0%
TCTCTCTCTTGAATGTTCAT+GGG - chr7_4:37552436-37552455 None:intergenic 35.0%
TTCTCTCTCTTGAATGTTCA+TGG - chr7_4:37552437-37552456 None:intergenic 35.0%
TTCATTATTCATCACCACAC+TGG - chr7_4:37552505-37552524 None:intergenic 35.0%
GGTTAAAATTAGTGGTACAC+CGG + chr7_4:37552550-37552569 Msa1152260:intron 35.0%
CATGAGAGAACTTAGATGTT+AGG - chr7_4:37552858-37552877 None:intergenic 35.0%
ACAAATCTGCAAAGAACACA+TGG + chr7_4:37553285-37553304 Msa1152260:intron 35.0%
GGGAATATAATAGCAAGACT+TGG + chr7_4:37553434-37553453 Msa1152260:intron 35.0%
! GTCAGTTTCTGAAAATTTGG+TGG + chr7_4:37553536-37553555 Msa1152260:intron 35.0%
TCTAGGTTGTCCATAAAAGA+GGG + chr7_4:37553583-37553602 Msa1152260:intron 35.0%
! AATAGACTTTTCTTCTCTGC+AGG - chr7_4:37553691-37553710 None:intergenic 35.0%
! TTAGCGGATAAACCCAATTT+AGG + chr7_4:37554038-37554057 Msa1152260:intron 35.0%
! CAACACAAATTGAGTTGCTA+AGG + chr7_4:37554241-37554260 Msa1152260:intron 35.0%
TTGGTTCATACTATGAAGCA+CGG - chr7_4:37554909-37554928 None:intergenic 35.0%
! CTGTGGTATTGAATTTGTCT+GGG - chr7_4:37555044-37555063 None:intergenic 35.0%
! GTCTGTGATTCCTAATGTTT+TGG - chr7_4:37555161-37555180 None:intergenic 35.0%
CACAGACTTCATAAATCCAA+AGG + chr7_4:37555174-37555193 Msa1152260:CDS 35.0%
GAAAAACTAACCTCGTATAC+CGG - chr7_4:37555211-37555230 None:intergenic 35.0%
!! GATTAGCTTGATTCTTTGAC+CGG - chr7_4:37555484-37555503 None:intergenic 35.0%
! TTTTGTATAATGCAGGGTTG+GGG + chr7_4:37555666-37555685 Msa1152260:intron 35.0%
ACTGTACTATTGGGAATTCA+TGG + chr7_4:37555693-37555712 Msa1152260:CDS 35.0%
GGTTCTGTTGAAGGAATAAA+TGG + chr7_4:37556210-37556229 Msa1152260:intron 35.0%
! GGAATAAATGGTTCTGTTGA+AGG + chr7_4:37556222-37556241 Msa1152260:intron 35.0%
! TTGCATGTGCAAAGTTGTTT+TGG + chr7_4:37556425-37556444 Msa1152260:intron 35.0%
AAGTTGCAACACCTCATAAA+TGG + chr7_4:37556590-37556609 Msa1152260:intron 35.0%
TAAACAAACAAGTAGAGAGG+AGG + chr7_4:37556700-37556719 Msa1152260:intron 35.0%
AAGTAGAGAGGAGGAAAATA+AGG + chr7_4:37556709-37556728 Msa1152260:intron 35.0%
AAAAGAGAGGGAAAAGTTTG+TGG - chr7_4:37556767-37556786 None:intergenic 35.0%
! TTCCCTCTCTTTTTATGGTA+AGG + chr7_4:37556774-37556793 Msa1152260:intron 35.0%
GTCCTTACCATAAAAAGAGA+GGG - chr7_4:37556779-37556798 None:intergenic 35.0%
AGTCCTTACCATAAAAAGAG+AGG - chr7_4:37556780-37556799 None:intergenic 35.0%
! GTGAACTTACTTATGGGTTA+TGG - chr7_4:37556885-37556904 None:intergenic 35.0%
TGCATGCATTTCATTCAAGT+AGG + chr7_4:37556972-37556991 Msa1152260:intron 35.0%
AACTTCAAAAAGTGAGACCA+AGG + chr7_4:37557079-37557098 Msa1152260:intron 35.0%
ACTTCAAAAAGTGAGACCAA+GGG + chr7_4:37557080-37557099 Msa1152260:intron 35.0%
GGAAAGATCATTACTTGCAA+AGG + chr7_4:37557101-37557120 Msa1152260:intron 35.0%
AGATCATTACTTGCAAAGGT+AGG + chr7_4:37557105-37557124 Msa1152260:intron 35.0%
TCTCACTTAATTTAGTGGTG+TGG + chr7_4:37557234-37557253 Msa1152260:intron 35.0%
! ATTCTAACCTCCATTTTCTG+AGG - chr7_4:37548524-37548543 None:intergenic 35.0%
! TGTGACAAATGGAAGTATAG+AGG - chr7_4:37557528-37557547 None:intergenic 35.0%
!! GTGAATTCATAGTGGATTAG+TGG + chr7_4:37557890-37557909 Msa1152260:intron 35.0%
! AAGTGGTGCTAATATTCAAC+GGG + chr7_4:37558012-37558031 Msa1152260:CDS 35.0%
ATGAAGAGACTAATGTGTGA+TGG + chr7_4:37558104-37558123 Msa1152260:CDS 35.0%
!!! TAAGCAAGGTGAGTTTTTTG+AGG - chr7_4:37549481-37549500 None:intergenic 35.0%
AATAATGCTAATGTGCATGC+TGG + chr7_4:37558405-37558424 Msa1152260:CDS 35.0%
! TCTGTAGCAATCTTTGGTTT+AGG + chr7_4:37558432-37558451 Msa1152260:CDS 35.0%
! ATCTTTGGTTTAGGTGCAAT+AGG + chr7_4:37558441-37558460 Msa1152260:CDS 35.0%
! TCTTTGGTTTAGGTGCAATA+GGG + chr7_4:37558442-37558461 Msa1152260:CDS 35.0%
! CTGTAAGATTCCTCATTTTC+TGG + chr7_4:37558469-37558488 Msa1152260:intron 35.0%
TTATATGGCACCAGAAAATG+AGG - chr7_4:37558482-37558501 None:intergenic 35.0%
!! GTATTTGTTTTCTCCTCTCA+AGG + chr7_4:37558557-37558576 Msa1152260:intron 35.0%
GCCCAAGTTCAATATAATTC+AGG - chr7_4:37559010-37559029 None:intergenic 35.0%
AATTATATTGAACTTGGGCC+AGG + chr7_4:37559011-37559030 Msa1152260:intron 35.0%
AACCCAGAGAAATTAACCAT+AGG + chr7_4:37559087-37559106 Msa1152260:intron 35.0%
TTATAAAGTCACATCAGGGA+AGG - chr7_4:37559255-37559274 None:intergenic 35.0%
TGTACTCAAAGCGAAATCAA+TGG + chr7_4:37559315-37559334 Msa1152260:intron 35.0%
GTACTCAAAGCGAAATCAAT+GGG + chr7_4:37559316-37559335 Msa1152260:intron 35.0%
TCACAGACTTCATAAATCCA+AGG + chr7_4:37555173-37555192 Msa1152260:CDS 35.0%
CACAGACTTCATAAATCCAA+GGG + chr7_4:37555174-37555193 Msa1152260:CDS 35.0%
AGAGAATCAGAGAAATGACT+GGG + chr7_4:37559458-37559477 Msa1152260:intron 35.0%
! CAGGAAATGTGAACGTTTTA+AGG + chr7_4:37559509-37559528 Msa1152260:CDS 35.0%
CAAATTGTATAATGCAGGGT+TGG + chr7_4:37559624-37559643 Msa1152260:intron 35.0%
AATTGTATAATGCAGGGTTG+GGG + chr7_4:37559626-37559645 Msa1152260:intron 35.0%
!! GCTTTGTTTATCTCGTCAAA+GGG - chr7_4:37559923-37559942 None:intergenic 35.0%
GCAACTTCAGAAGTTGCAAA+TGG + chr7_4:37548269-37548288 Msa1152260:CDS 40.0%
CAACCACTTAAGTGAGACAA+AGG + chr7_4:37548292-37548311 Msa1152260:CDS 40.0%
TTCCCTTTGTCTCACTTAAG+TGG - chr7_4:37548298-37548317 None:intergenic 40.0%
GGAAAGACCATTACTTGCAA+AGG + chr7_4:37548314-37548333 Msa1152260:CDS 40.0%
AGACCATTACTTGCAAAGGT+AGG + chr7_4:37548318-37548337 Msa1152260:intron 40.0%
CTACCTACCTTTGCAAGTAA+TGG - chr7_4:37548324-37548343 None:intergenic 40.0%
! GCTTTTTGTATTAGCTGCTG+TGG + chr7_4:37548448-37548467 Msa1152260:intron 40.0%
TGTACAACCTCCTCAGAAAA+TGG + chr7_4:37548511-37548530 Msa1152260:CDS 40.0%
ACTGAGATCAGTGTGACAAA+TGG - chr7_4:37548564-37548583 None:intergenic 40.0%
ATTTGTCACACTGATCTCAG+TGG + chr7_4:37548563-37548582 Msa1152260:CDS 40.0%
!!! ATTTTTGGCCATGAAGCTTC+CGG + chr7_4:37548748-37548767 Msa1152260:intron 40.0%
ACCAACATGTGTGAGAAATC+TGG + chr7_4:37549296-37549315 Msa1152260:intron 40.0%
TCCAGATTTCTCACACATGT+TGG - chr7_4:37549300-37549319 None:intergenic 40.0%
AACTTTCACTGAGTATACGG+TGG + chr7_4:37549409-37549428 Msa1152260:intron 40.0%
AAACTCACCTTGCTTAGTTG+TGG + chr7_4:37549485-37549504 Msa1152260:intron 40.0%
AGAAAAGAAGGACTTACCTG+TGG - chr7_4:37549516-37549535 None:intergenic 40.0%
TAACCCCTTTATATACGGTG+AGG + chr7_4:37549645-37549664 Msa1152260:intron 40.0%
ATGCCATGATAATTGTGGGA+CGG + chr7_4:37550171-37550190 Msa1152260:intron 40.0%
TTTGGAAGTTTGGAAGGAAG+AGG + chr7_4:37550502-37550521 Msa1152260:intron 40.0%
AAGTTTGGAAGGAAGAGGAA+TGG + chr7_4:37550507-37550526 Msa1152260:intron 40.0%
AGTTTGGAAGGAAGAGGAAT+GGG + chr7_4:37550508-37550527 Msa1152260:intron 40.0%
GTTTGCGAGTTTAAAGGAGA+AGG - chr7_4:37550561-37550580 None:intergenic 40.0%
GGCAGATGCATGATTTAACT+CGG - chr7_4:37550653-37550672 None:intergenic 40.0%
ATAACAAAAATGGGACACCG+AGG - chr7_4:37551024-37551043 None:intergenic 40.0%
ATCCCAAATCCCATACGAAA+AGG - chr7_4:37551128-37551147 None:intergenic 40.0%
! AGTCAAGGGAGCATAAGATA+AGG - chr7_4:37551208-37551227 None:intergenic 40.0%
! CTCTCTTGTAAGGATGGATT+AGG - chr7_4:37551697-37551716 None:intergenic 40.0%
TTTCGACTCTCTTGTAAGGA+TGG - chr7_4:37551703-37551722 None:intergenic 40.0%
AGGGTGAACCATCAATTGAA+TGG + chr7_4:37551785-37551804 Msa1152260:intron 40.0%
CCATCAATTGAATGGTTCAC+CGG + chr7_4:37551793-37551812 Msa1152260:intron 40.0%
GGGTTTGTAGAGATAGTTTG+TGG - chr7_4:37552008-37552027 None:intergenic 40.0%
TATCTTACGAGAGGATTCAG+TGG - chr7_4:37552035-37552054 None:intergenic 40.0%
GGGGAAAAATATCTTACGAG+AGG - chr7_4:37552044-37552063 None:intergenic 40.0%
AGAGTCCCATTTGAAAGGAA+GGG - chr7_4:37552064-37552083 None:intergenic 40.0%
AAGAGTCCCATTTGAAAGGA+AGG - chr7_4:37552065-37552084 None:intergenic 40.0%
GCAAAAGAGTCCCATTTGAA+AGG - chr7_4:37552069-37552088 None:intergenic 40.0%
TTGAATGTTCATGGGCCATA+TGG - chr7_4:37552428-37552447 None:intergenic 40.0%
TGTGGGTGTGTTTAATCTGA+TGG + chr7_4:37552529-37552548 Msa1152260:intron 40.0%
GGTTCAATTAAGTCTCTCAC+CGG - chr7_4:37552572-37552591 None:intergenic 40.0%
!!! TTTTTTTACCCTCTGTTGCG+TGG + chr7_4:37553005-37553024 Msa1152260:intron 40.0%
CTCTTAGACATGAGTGGAAT+AGG - chr7_4:37553510-37553529 None:intergenic 40.0%
GAACTAAAATATCGCCGTCT+AGG + chr7_4:37553558-37553577 Msa1152260:intron 40.0%
CTCTAGGTTGTCCATAAAAG+AGG + chr7_4:37553582-37553601 Msa1152260:intron 40.0%
CTAGGTTGTCCATAAAAGAG+GGG + chr7_4:37553584-37553603 Msa1152260:intron 40.0%
! TCCTTGTTTACAAAGGGTGT+TGG + chr7_4:37553867-37553886 Msa1152260:intron 40.0%
TCCAACACCCTTTGTAAACA+AGG - chr7_4:37553871-37553890 None:intergenic 40.0%
!! TTACAAAGGGTGTTGGATCT+AGG + chr7_4:37553874-37553893 Msa1152260:intron 40.0%
!! TACAAAGGGTGTTGGATCTA+GGG + chr7_4:37553875-37553894 Msa1152260:intron 40.0%
TCTCTCTCTCTCTCTTAACT+TGG + chr7_4:37554107-37554126 Msa1152260:intron 40.0%
ACCCTTAGTATAATAACGCG+TGG + chr7_4:37554508-37554527 Msa1152260:intron 40.0%
CCCACGCGTTATTATACTAA+GGG - chr7_4:37554512-37554531 None:intergenic 40.0%
CCCTTAGTATAATAACGCGT+GGG + chr7_4:37554509-37554528 Msa1152260:intron 40.0%
ACCCACGCGTTATTATACTA+AGG - chr7_4:37554513-37554532 None:intergenic 40.0%
AATACTGCTAATGTGCATGC+TGG + chr7_4:37554665-37554684 Msa1152260:intron 40.0%
! TCTGTAGCTGTCTTTGGTTT+AGG + chr7_4:37554692-37554711 Msa1152260:intron 40.0%
! TCTTTGGTTTAGGTGCAGTT+GGG + chr7_4:37554702-37554721 Msa1152260:intron 40.0%
!! CTCGCTGTAAGTTTTATGCA+CGG + chr7_4:37554725-37554744 Msa1152260:intron 40.0%
TTTATGCACGGATACGAACA+CGG + chr7_4:37554737-37554756 Msa1152260:intron 40.0%
TACAAGTGTCAGTGTCATGT+CGG + chr7_4:37554834-37554853 Msa1152260:intron 40.0%
! CCTGTGGTATTGAATTTGTC+TGG - chr7_4:37555045-37555064 None:intergenic 40.0%
CCAGACAAATTCAATACCAC+AGG + chr7_4:37555042-37555061 Msa1152260:CDS 40.0%
GTGCTCAAAGCCAAAACATT+AGG + chr7_4:37555148-37555167 Msa1152260:intron 40.0%
ATCAGAGAAATGACTGAAGG+AGG + chr7_4:37555308-37555327 Msa1152260:CDS 40.0%
AATCTTATCGTCCACCTACA+GGG + chr7_4:37555513-37555532 Msa1152260:intron 40.0%
TTGGGGATTGACTGTACTAT+TGG + chr7_4:37555683-37555702 Msa1152260:CDS 40.0%
TGGGGATTGACTGTACTATT+GGG + chr7_4:37555684-37555703 Msa1152260:CDS 40.0%
ATGCATTCTGTGGCAAGATT+AGG - chr7_4:37555816-37555835 None:intergenic 40.0%
TTGCCACAGAATGCATGAAA+GGG + chr7_4:37555820-37555839 Msa1152260:CDS 40.0%
GCTTGGTTTATCTCGTCAAA+GGG - chr7_4:37555966-37555985 None:intergenic 40.0%
GGTTCTGTTGAAGGAATTCT+AGG + chr7_4:37556231-37556250 Msa1152260:intron 40.0%
TGCAACTTGCATGTGTATTG+TGG - chr7_4:37556578-37556597 None:intergenic 40.0%
GGAGGAAAATAAGGAAAGAG+AGG + chr7_4:37556718-37556737 Msa1152260:intron 40.0%
GGAAAATAAGGAAAGAGAGG+AGG + chr7_4:37556721-37556740 Msa1152260:intron 40.0%
AATAAGGAAAGAGAGGAGGT+AGG + chr7_4:37556725-37556744 Msa1152260:intron 40.0%
GCAAGTAATGATCTTTCCCT+TGG - chr7_4:37557099-37557118 None:intergenic 40.0%
CTCAAGCAGATGAGAAAGTT+TGG - chr7_4:37557364-37557383 None:intergenic 40.0%
TGTACAACCTCCTCAGAAAA+TGG + chr7_4:37548511-37548530 Msa1152260:CDS 40.0%
!!! ATTTTTGGCCATGAAGCTTC+CGG + chr7_4:37548748-37548767 Msa1152260:intron 40.0%
GGTGTGAAAATATTCGTACC+CGG - chr7_4:37557727-37557746 None:intergenic 40.0%
! AGTGGTGCTAATATTCAACG+GGG + chr7_4:37558013-37558032 Msa1152260:CDS 40.0%
ACCAACATGTGTGAGAAGTA+TGG + chr7_4:37558071-37558090 Msa1152260:CDS 40.0%
ACCATACTTCTCACACATGT+TGG - chr7_4:37558075-37558094 None:intergenic 40.0%
!!! GGTGAGTTTTTTGAGGCTAA+GGG - chr7_4:37558249-37558268 None:intergenic 40.0%
!!! AGGTGAGTTTTTTGAGGCTA+AGG - chr7_4:37558250-37558269 None:intergenic 40.0%
AAACTCACCTTGCTTAGTTG+TGG + chr7_4:37549485-37549504 Msa1152260:intron 40.0%
AAGAGAGAGTAACTTACCTG+TGG - chr7_4:37558291-37558310 None:intergenic 40.0%
GGTTCTTCTGTAGCAATCTT+TGG + chr7_4:37558426-37558445 Msa1152260:CDS 40.0%
AAGGACAATTTCACTGCATC+AGG + chr7_4:37558576-37558595 Msa1152260:intron 40.0%
TGAAGAGAAGTCTGTAGTTG+AGG + chr7_4:37559366-37559385 Msa1152260:intron 40.0%
CAGAGAATCAGAGAAATGAC+TGG + chr7_4:37559457-37559476 Msa1152260:intron 40.0%
GAGAATCAGAGAAATGACTG+GGG + chr7_4:37559459-37559478 Msa1152260:intron 40.0%
AGAATCAGAGAAATGACTGG+GGG + chr7_4:37559460-37559479 Msa1152260:CDS 40.0%
!!! CACTACAGTTTTGAATGCAC+AGG + chr7_4:37559490-37559509 Msa1152260:CDS 40.0%
AAAATCGAAGGATCGGTCTT+TGG + chr7_4:37559725-37559744 Msa1152260:CDS 40.0%
ATGCATTCTGTGGCAAGATT+AGG - chr7_4:37555816-37555835 None:intergenic 40.0%
TTGCCACAGAATGCATGAAA+GGG + chr7_4:37555820-37555839 Msa1152260:CDS 40.0%
!! GGCTTTGTTTATCTCGTCAA+AGG - chr7_4:37559924-37559943 None:intergenic 40.0%
ACAACCTCCTCAGAAAATGG+AGG + chr7_4:37548514-37548533 Msa1152260:CDS 45.0%
!! CTAACCTCCATTTTCTGAGG+AGG - chr7_4:37548521-37548540 None:intergenic 45.0%
ACTGATCTCAGTGGTTGGAA+AGG + chr7_4:37548572-37548591 Msa1152260:CDS 45.0%
GCTCGCACTTTGATTGATGA+AGG - chr7_4:37548708-37548727 None:intergenic 45.0%
! CGTGCTTATCCTCGGATTTT+TGG + chr7_4:37548733-37548752 Msa1152260:intron 45.0%
!! TTTTTGGCCATGAAGCTTCC+GGG + chr7_4:37548749-37548768 Msa1152260:intron 45.0%
TTTCTTACCCGGAAGCTTCA+TGG - chr7_4:37548759-37548778 None:intergenic 45.0%
! TGTAGGGTTGTGGAAAGTGT+AGG + chr7_4:37549182-37549201 Msa1152260:intron 45.0%
! GTAGGGTTGTGGAAAGTGTA+GGG + chr7_4:37549183-37549202 Msa1152260:intron 45.0%
! TAGGGTTGTGGAAAGTGTAG+GGG + chr7_4:37549184-37549203 Msa1152260:intron 45.0%
TTTCACTGAGTATACGGTGG+TGG + chr7_4:37549412-37549431 Msa1152260:intron 45.0%
GGAAACTCCACAACTAAGCA+AGG - chr7_4:37549495-37549514 None:intergenic 45.0%
CTTAGTTGTGGAGTTTCCAC+AGG + chr7_4:37549497-37549516 Msa1152260:intron 45.0%
TCACCGTCCCACAATTATCA+TGG - chr7_4:37550177-37550196 None:intergenic 45.0%
! GGGAGCATAAGATAAGGAGA+GGG - chr7_4:37551202-37551221 None:intergenic 45.0%
! AGGGAGCATAAGATAAGGAG+AGG - chr7_4:37551203-37551222 None:intergenic 45.0%
CCGGTGAACCATTCAATTGA+TGG - chr7_4:37551796-37551815 None:intergenic 45.0%
TCAATTGAATGGTTCACCGG+TGG + chr7_4:37551796-37551815 Msa1152260:intron 45.0%
GGTATATAAAGGTGGTCCAC+CGG - chr7_4:37551815-37551834 None:intergenic 45.0%
GAGTCCCATTTGAAAGGAAG+GGG - chr7_4:37552063-37552082 None:intergenic 45.0%
TTTGTGGTGAAGAGAGAGAG+TGG + chr7_4:37552462-37552481 Msa1152260:intron 45.0%
CAACATGCAAAGATCCAGTG+TGG + chr7_4:37552488-37552507 Msa1152260:intron 45.0%
!! ATAGGTGGATTCTAGGGTGA+GGG - chr7_4:37552593-37552612 None:intergenic 45.0%
!! TATAGGTGGATTCTAGGGTG+AGG - chr7_4:37552594-37552613 None:intergenic 45.0%
TTGTCGCTCTTAGACATGAG+TGG - chr7_4:37553516-37553535 None:intergenic 45.0%
! CTCTTAACTTGGATTCCGTG+AGG + chr7_4:37554118-37554137 Msa1152260:intron 45.0%
! TTAACTTGGATTCCGTGAGG+AGG + chr7_4:37554121-37554140 Msa1152260:intron 45.0%
AACTTTCAAGGTCCTCCTCA+CGG - chr7_4:37554136-37554155 None:intergenic 45.0%
TCTTATCCGCGTTTGAACTC+AGG + chr7_4:37554470-37554489 Msa1152260:intron 45.0%
CTTATCCGCGTTTGAACTCA+GGG + chr7_4:37554471-37554490 Msa1152260:intron 45.0%
ATGTAGGAATAGGAGCTGCT+TGG + chr7_4:37554642-37554661 Msa1152260:intron 45.0%
GGTTCATCTGTAGCTGTCTT+TGG + chr7_4:37554686-37554705 Msa1152260:intron 45.0%
! GTCTTTGGTTTAGGTGCAGT+TGG + chr7_4:37554701-37554720 Msa1152260:intron 45.0%
! TTGGATTACTGTCTCGGTGT+CGG - chr7_4:37554879-37554898 None:intergenic 45.0%
CACTCCTTGGATTACTGTCT+CGG - chr7_4:37554885-37554904 None:intergenic 45.0%
! GAAGTGTTTGAAGCTACCTG+TGG - chr7_4:37555061-37555080 None:intergenic 45.0%
TCCAAAGGATGAAGAGAAGC+CGG + chr7_4:37555189-37555208 Msa1152260:CDS 45.0%
TAGCTTCTTGTCTGTGCATG+AGG + chr7_4:37555379-37555398 Msa1152260:intron 45.0%
TAGGTGGACGATAAGATTGG+TGG - chr7_4:37555511-37555530 None:intergenic 45.0%
CTGTAGGTGGACGATAAGAT+TGG - chr7_4:37555514-37555533 None:intergenic 45.0%
CAATCTTATCGTCCACCTAC+AGG + chr7_4:37555512-37555531 Msa1152260:intron 45.0%
TCTTTAAATGGCCACCCTGT+AGG - chr7_4:37555530-37555549 None:intergenic 45.0%
! TTTGATGGTCGCAGAATCGA+AGG + chr7_4:37555753-37555772 Msa1152260:CDS 45.0%
!! AGAATCGAAGGTTCGGTGTT+CGG + chr7_4:37555765-37555784 Msa1152260:CDS 45.0%
CTTGCCACAGAATGCATGAA+AGG + chr7_4:37555819-37555838 Msa1152260:CDS 45.0%
TGCCACAGAATGCATGAAAG+GGG + chr7_4:37555821-37555840 Msa1152260:CDS 45.0%
TACCCCTTTCATGCATTCTG+TGG - chr7_4:37555826-37555845 None:intergenic 45.0%
CGCTTGGTTTATCTCGTCAA+AGG - chr7_4:37555967-37555986 None:intergenic 45.0%
CAATCAAGAGATCGAACGCT+TGG - chr7_4:37555983-37556002 None:intergenic 45.0%
CGTTCGATCTCTTGATTGCA+GGG + chr7_4:37555985-37556004 Msa1152260:CDS 45.0%
ACAACCTCCTCAGAAAATGG+AGG + chr7_4:37548514-37548533 Msa1152260:CDS 45.0%
!! CTAACCTCCATTTTCTGAGG+AGG - chr7_4:37548521-37548540 None:intergenic 45.0%
ACTGAGATCGGTGTGACAAA+TGG - chr7_4:37557539-37557558 None:intergenic 45.0%
ATTTGTCACACCGATCTCAG+TGG + chr7_4:37557538-37557557 Msa1152260:CDS 45.0%
! AACCTCAACGTGCTTTTCCT+CGG + chr7_4:37557682-37557701 Msa1152260:CDS 45.0%
! CGTGCTTTTCCTCGGATTTT+TGG + chr7_4:37557690-37557709 Msa1152260:CDS 45.0%
!! TTTTTGGCCATGAAGCTTCC+GGG + chr7_4:37548749-37548768 Msa1152260:intron 45.0%
! TGTAGGATTGTGGAGAGTGT+AGG + chr7_4:37557957-37557976 Msa1152260:intron 45.0%
! GTAGGATTGTGGAGAGTGTA+GGG + chr7_4:37557958-37557977 Msa1152260:intron 45.0%
! TAGGATTGTGGAGAGTGTAG+GGG + chr7_4:37557959-37557978 Msa1152260:intron 45.0%
CTAATATTCAACGGGGAGTG+TGG + chr7_4:37558020-37558039 Msa1152260:CDS 45.0%
GGAAACTCCACAACTAAGCA+AGG - chr7_4:37549495-37549514 None:intergenic 45.0%
CTTAGTTGTGGAGTTTCCAC+AGG + chr7_4:37549497-37549516 Msa1152260:intron 45.0%
ATGTAGGAATTGGAGCTGCT+TGG + chr7_4:37558382-37558401 Msa1152260:intron 45.0%
GCAGTGAAATTGTCCTTGAG+AGG - chr7_4:37558573-37558592 None:intergenic 45.0%
TTGTTAACCCTCCGATTCTC+AGG + chr7_4:37559135-37559154 Msa1152260:intron 45.0%
TGTTAACCCTCCGATTCTCA+GGG + chr7_4:37559136-37559155 Msa1152260:intron 45.0%
TAAAGTCACATCAGGGAAGG+AGG - chr7_4:37559252-37559271 None:intergenic 45.0%
ACAGACTTCTCTTCATCCCT+TGG - chr7_4:37559361-37559380 None:intergenic 45.0%
GAGAAGTCTGTAGTTGAGGT+TGG + chr7_4:37559370-37559389 Msa1152260:intron 45.0%
TTCCTTCTTGTCCTGTCATG+AGG + chr7_4:37559534-37559553 Msa1152260:CDS 45.0%
TACCTCATGACAGGACAAGA+AGG - chr7_4:37559539-37559558 None:intergenic 45.0%
TTGGGGATTGACTGTACTAC+TGG + chr7_4:37559643-37559662 Msa1152260:CDS 45.0%
TGGGGATTGACTGTACTACT+GGG + chr7_4:37559644-37559663 Msa1152260:CDS 45.0%
! TTTGATGGCCGCAAAATCGA+AGG + chr7_4:37559713-37559732 Msa1152260:CDS 45.0%
! AGACCGATCCTTCGATTTTG+CGG - chr7_4:37559724-37559743 None:intergenic 45.0%
! TCGGTCTTTGGAGGTTTCAA+AGG + chr7_4:37559737-37559756 Msa1152260:CDS 45.0%
CTTGCCACAGAATGCATGAA+AGG + chr7_4:37555819-37555838 Msa1152260:CDS 45.0%
TGCCACAGAATGCATGAAAG+GGG + chr7_4:37555821-37555840 Msa1152260:CDS 45.0%
TACCCCTTTCATGCATTCTG+TGG - chr7_4:37555826-37555845 None:intergenic 45.0%
!! GCCTTCGATCTTTTGATTGC+CGG + chr7_4:37559941-37559960 Msa1152260:CDS 45.0%
!! CCTTCGATCTTTTGATTGCC+GGG + chr7_4:37559942-37559961 Msa1152260:CDS 45.0%
AAGACATCTCAGTGACTTCC+CGG - chr7_4:37559963-37559982 None:intergenic 45.0%
!! TAAATAATTATAACAAAAAT+GGG - chr7_4:37551033-37551052 None:intergenic 5.0%
!! TTAAATAATTATAACAAAAA+TGG - chr7_4:37551034-37551053 None:intergenic 5.0%
!!! ATTTTTTTGAAAAAAAAATT+GGG + chr7_4:37552978-37552997 Msa1152260:intron 5.0%
!!! TACTTTTTTTTTTTTTTTAT+TGG + chr7_4:37556917-37556936 Msa1152260:intron 5.0%
!!! ACTTATTTTATAAAATTATT+TGG + chr7_4:37557868-37557887 Msa1152260:intron 5.0%
GTATTAGCTGCTGTGGCACA+TGG + chr7_4:37548455-37548474 Msa1152260:intron 50.0%
TCCAGGAGAACCCTTTGTAG+TGG + chr7_4:37548478-37548497 Msa1152260:CDS 50.0%
TCCACTACAAAGGGTTCTCC+TGG - chr7_4:37548482-37548501 None:intergenic 50.0%
GTCACACTGATCTCAGTGGT+TGG + chr7_4:37548567-37548586 Msa1152260:CDS 50.0%
TCTCAGTGGTTGGAAAGGAG+AGG + chr7_4:37548577-37548596 Msa1152260:CDS 50.0%
GCTTCATGGCCAAAAATCCG+AGG - chr7_4:37548745-37548764 None:intergenic 50.0%
! GTTGTGGAAAGTGTAGGGGA+AGG + chr7_4:37549188-37549207 Msa1152260:intron 50.0%
CAAGACGCACAACTACCCTT+TGG - chr7_4:37550410-37550429 None:intergenic 50.0%
CACGTGCTAGTCAAGGCTAT+TGG - chr7_4:37551090-37551109 None:intergenic 50.0%
GAAGACACACGTGCTAGTCA+AGG - chr7_4:37551097-37551116 None:intergenic 50.0%
GATGGGAGGAGAGACAAAGA+GGG - chr7_4:37551927-37551946 None:intergenic 50.0%
AGATGGGAGGAGAGACAAAG+AGG - chr7_4:37551928-37551947 None:intergenic 50.0%
CGAGAGGATTCAGTGGAGAT+GGG - chr7_4:37552028-37552047 None:intergenic 50.0%
ACGAGAGGATTCAGTGGAGA+TGG - chr7_4:37552029-37552048 None:intergenic 50.0%
! ATATCGCCGTCTAGGACTCT+AGG + chr7_4:37553566-37553585 Msa1152260:intron 50.0%
GGACAACCTAGAGTCCTAGA+CGG - chr7_4:37553575-37553594 None:intergenic 50.0%
TGATGCCCTGAGTTCAAACG+CGG - chr7_4:37554479-37554498 None:intergenic 50.0%
TGTCAGTGTCATGTCGGTGT+CGG + chr7_4:37554840-37554859 Msa1152260:intron 50.0%
GACACCGAGACAGTAATCCA+AGG + chr7_4:37554878-37554897 Msa1152260:intron 50.0%
TATGAAGCACGGACACTCCT+TGG - chr7_4:37554898-37554917 None:intergenic 50.0%
! AACTTGGGTCAGGTTGCAGA+AGG + chr7_4:37554973-37554992 Msa1152260:intron 50.0%
! ACTTGGGTCAGGTTGCAGAA+GGG + chr7_4:37554974-37554993 Msa1152260:intron 50.0%
! ACCGGCTTCTCTTCATCCTT+TGG - chr7_4:37555193-37555212 None:intergenic 50.0%
TGAAGAGAAGCCGGTATACG+AGG + chr7_4:37555198-37555217 Msa1152260:CDS 50.0%
! GGACGATAAGATTGGTGGTC+TGG - chr7_4:37555506-37555525 None:intergenic 50.0%
TTAAATGGCCACCCTGTAGG+TGG - chr7_4:37555527-37555546 None:intergenic 50.0%
GACCATCAAAGAGCTCCATC+GGG - chr7_4:37555743-37555762 None:intergenic 50.0%
CGACCATCAAAGAGCTCCAT+CGG - chr7_4:37555744-37555763 None:intergenic 50.0%
TGGTCGCAGAATCGAAGGTT+CGG + chr7_4:37555758-37555777 Msa1152260:CDS 50.0%
! TCGGTGTTCGGAGGTTTCAA+AGG + chr7_4:37555777-37555796 Msa1152260:CDS 50.0%
GCGTTCGATCTCTTGATTGC+AGG + chr7_4:37555984-37556003 Msa1152260:CDS 50.0%
GGAAAGAGAGGAGGTAGGTT+AGG + chr7_4:37556730-37556749 Msa1152260:intron 50.0%
! TCCTGGAGCATTTGCCACAA+AGG - chr7_4:37557440-37557459 None:intergenic 50.0%
AAATGCTCCAGGAGAACCCT+TGG + chr7_4:37557447-37557466 Msa1152260:CDS 50.0%
TGCATTACCAAGGGTTCTCC+TGG - chr7_4:37557457-37557476 None:intergenic 50.0%
ACCGATCTCAGTGGTTGGAA+AGG + chr7_4:37557547-37557566 Msa1152260:CDS 50.0%
GCCTTTCCAACCACTGAGAT+CGG - chr7_4:37557551-37557570 None:intergenic 50.0%
! ATCCGAGGAAAAGCACGTTG+AGG - chr7_4:37557687-37557706 None:intergenic 50.0%
GCTTCATGGCCAAAAATCCG+AGG - chr7_4:37548745-37548764 None:intergenic 50.0%
ATTCGTACCCGGAAGCTTCA+TGG - chr7_4:37557716-37557735 None:intergenic 50.0%
! ATTGTGGAGAGTGTAGGGGA+AGG + chr7_4:37557963-37557982 Msa1152260:CDS 50.0%
!! GAGTACACAGTGGTGGATTC+AGG + chr7_4:37558194-37558213 Msa1152260:CDS 50.0%
CTCTTTCCCTGAGAATCGGA+GGG - chr7_4:37559145-37559164 None:intergenic 50.0%
CTCCGATTCTCAGGGAAAGA+GGG + chr7_4:37559144-37559163 Msa1152260:intron 50.0%
AGCCCTCTTTCCCTGAGAAT+CGG - chr7_4:37559149-37559168 None:intergenic 50.0%
ATCAGAGAAATGACTGGGGG+AGG + chr7_4:37559463-37559482 Msa1152260:CDS 50.0%
GGGTGGAGAGGAAGTAACTT+TGG - chr7_4:37559683-37559702 None:intergenic 50.0%
GTTACTTCCTCTCCACCCAA+TGG + chr7_4:37559685-37559704 Msa1152260:CDS 50.0%
CATCAAAGAGCTCCATTGGG+TGG - chr7_4:37559700-37559719 None:intergenic 50.0%
CACCCAATGGAGCTCTTTGA+TGG + chr7_4:37559698-37559717 Msa1152260:CDS 50.0%
GGCCATCAAAGAGCTCCATT+GGG - chr7_4:37559703-37559722 None:intergenic 50.0%
TGGCCGCAAAATCGAAGGAT+CGG + chr7_4:37559718-37559737 Msa1152260:CDS 50.0%
ATCGAAGGATCGGTCTTTGG+AGG + chr7_4:37559728-37559747 Msa1152260:CDS 50.0%
CCCGGCAATCAAAAGATCGA+AGG - chr7_4:37559945-37559964 None:intergenic 50.0%
AGCCTCAGCGTGCTTATCCT+CGG + chr7_4:37548725-37548744 Msa1152260:intron 55.0%
ATCCGAGGATAAGCACGCTG+AGG - chr7_4:37548730-37548749 None:intergenic 55.0%
TTGCGGACGAGAGTCCTATG+AGG + chr7_4:37550947-37550966 Msa1152260:intron 55.0%
AGAGGGAGGAGGTGGGAAAA+GGG - chr7_4:37551910-37551929 None:intergenic 55.0%
AAGAGGGAGGAGGTGGGAAA+AGG - chr7_4:37551911-37551930 None:intergenic 55.0%
GAGACAAAGAGGGAGGAGGT+GGG - chr7_4:37551917-37551936 None:intergenic 55.0%
AGAGACAAAGAGGGAGGAGG+TGG - chr7_4:37551918-37551937 None:intergenic 55.0%
AGGAGAGACAAAGAGGGAGG+AGG - chr7_4:37551921-37551940 None:intergenic 55.0%
GACGAATGCCACGCAACAGA+GGG - chr7_4:37553016-37553035 None:intergenic 55.0%
CTCTGTTGCGTGGCATTCGT+CGG + chr7_4:37553015-37553034 Msa1152260:intron 55.0%
ACGGATACGAACACGGACAC+CGG + chr7_4:37554744-37554763 Msa1152260:intron 55.0%
GTCAGTATCCGTGTCGTGTC+CGG - chr7_4:37554766-37554785 None:intergenic 55.0%
! CTTGGGTCAGGTTGCAGAAG+GGG + chr7_4:37554975-37554994 Msa1152260:intron 55.0%
CTTATCGTCCACCTACAGGG+TGG + chr7_4:37555516-37555535 Msa1152260:intron 55.0%
GGGTGGATGGGAAGCAACTT+TGG - chr7_4:37555723-37555742 None:intergenic 55.0%
AAGAGCTCCATCGGGTGGAT+GGG - chr7_4:37555735-37555754 None:intergenic 55.0%
AAAGAGCTCCATCGGGTGGA+TGG - chr7_4:37555736-37555755 None:intergenic 55.0%
CATCAAAGAGCTCCATCGGG+TGG - chr7_4:37555740-37555759 None:intergenic 55.0%
CACCCGATGGAGCTCTTTGA+TGG + chr7_4:37555738-37555757 Msa1152260:CDS 55.0%
!! ATCGAAGGTTCGGTGTTCGG+AGG + chr7_4:37555768-37555787 Msa1152260:CDS 55.0%
GCCTTTGTGGCAAATGCTCC+AGG + chr7_4:37557436-37557455 Msa1152260:intron 55.0%
GTCACACCGATCTCAGTGGT+TGG + chr7_4:37557542-37557561 Msa1152260:CDS 55.0%
TCTCAGTGGTTGGAAAGGCG+AGG + chr7_4:37557552-37557571 Msa1152260:CDS 55.0%
AACTTGGGCCAGGTTGCTCT+AGG + chr7_4:37559021-37559040 Msa1152260:intron 55.0%
ACTTGGGCCAGGTTGCTCTA+GGG + chr7_4:37559022-37559041 Msa1152260:intron 55.0%
CCTCTTTCCCTGAGAATCGG+AGG - chr7_4:37559146-37559165 None:intergenic 55.0%
CCTCCGATTCTCAGGGAAAG+AGG + chr7_4:37559143-37559162 Msa1152260:intron 55.0%
TTCTCAGGGAAAGAGGGCTC+TGG + chr7_4:37559150-37559169 Msa1152260:intron 55.0%
AAGAGCTCCATTGGGTGGAG+AGG - chr7_4:37559695-37559714 None:intergenic 55.0%
CGGCCATCAAAGAGCTCCAT+TGG - chr7_4:37559704-37559723 None:intergenic 55.0%
GGGAGGAGAGACAAAGAGGG+AGG - chr7_4:37551924-37551943 None:intergenic 60.0%
CGACGAATGCCACGCAACAG+AGG - chr7_4:37553017-37553036 None:intergenic 60.0%
GTTGCTTCCCATCCACCCGA+TGG + chr7_4:37555725-37555744 Msa1152260:CDS 60.0%
CTTGGGCCAGGTTGCTCTAG+GGG + chr7_4:37559023-37559042 Msa1152260:intron 60.0%
GCTGCTGTGGCACATGGTCC+AGG + chr7_4:37548461-37548480 Msa1152260:intron 65.0%
CGTGGCATTCGTCGGACACG+TGG + chr7_4:37553023-37553042 Msa1152260:intron 65.0%
CACGGACACCGGACACGACA+CGG + chr7_4:37554755-37554774 Msa1152260:intron 65.0%
CTCGTGCCCCTAGAGCAACC+TGG - chr7_4:37559032-37559051 None:intergenic 65.0%
! GCAGAAGGGGCACGAGCCAG+AGG + chr7_4:37554988-37555007 Msa1152260:CDS 70.0%
!! GCTCTAGGGGCACGAGCCAG+AGG + chr7_4:37559036-37559055 Msa1152260:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 37548190 37560173 37548190 ID=Msa1152260;Name=Msa1152260
chr7_4 mRNA 37548190 37560173 37548190 ID=Msa1152260-mRNA-1;Parent=Msa1152260;Name=Msa1152260-mRNA-1;_AED=0.27;_eAED=0.27;_QI=76|0.69|0.78|1|1|1|14|179|553
chr7_4 exon 37548190 37548335 37548190 ID=Msa1152260-mRNA-1:exon:8889;Parent=Msa1152260-mRNA-1
chr7_4 exon 37548462 37548598 37548462 ID=Msa1152260-mRNA-1:exon:8890;Parent=Msa1152260-mRNA-1
chr7_4 exon 37554985 37555063 37554985 ID=Msa1152260-mRNA-1:exon:8891;Parent=Msa1152260-mRNA-1
chr7_4 exon 37555158 37555219 37555158 ID=Msa1152260-mRNA-1:exon:8892;Parent=Msa1152260-mRNA-1
chr7_4 exon 37555305 37555391 37555305 ID=Msa1152260-mRNA-1:exon:8893;Parent=Msa1152260-mRNA-1
chr7_4 exon 37555681 37555842 37555681 ID=Msa1152260-mRNA-1:exon:8894;Parent=Msa1152260-mRNA-1
chr7_4 exon 37555927 37556020 37555927 ID=Msa1152260-mRNA-1:exon:8895;Parent=Msa1152260-mRNA-1
chr7_4 exon 37557437 37557573 37557437 ID=Msa1152260-mRNA-1:exon:8896;Parent=Msa1152260-mRNA-1
chr7_4 exon 37557678 37557727 37557678 ID=Msa1152260-mRNA-1:exon:8897;Parent=Msa1152260-mRNA-1
chr7_4 exon 37557962 37558293 37557962 ID=Msa1152260-mRNA-1:exon:8898;Parent=Msa1152260-mRNA-1
chr7_4 exon 37558388 37558470 37558388 ID=Msa1152260-mRNA-1:exon:8899;Parent=Msa1152260-mRNA-1
chr7_4 exon 37559460 37559555 37559460 ID=Msa1152260-mRNA-1:exon:8900;Parent=Msa1152260-mRNA-1
chr7_4 exon 37559641 37559802 37559641 ID=Msa1152260-mRNA-1:exon:8901;Parent=Msa1152260-mRNA-1
chr7_4 exon 37559884 37560173 37559884 ID=Msa1152260-mRNA-1:exon:8902;Parent=Msa1152260-mRNA-1
chr7_4 five_prime_UTR 37548190 37548265 37548190 ID=Msa1152260-mRNA-1:five_prime_utr;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37548266 37548335 37548266 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37548462 37548598 37548462 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37554985 37555063 37554985 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37555158 37555219 37555158 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37555305 37555391 37555305 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37555681 37555842 37555681 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37555927 37556020 37555927 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37557437 37557573 37557437 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37557678 37557727 37557678 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37557962 37558293 37557962 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37558388 37558470 37558388 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37559460 37559555 37559460 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37559641 37559802 37559641 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 CDS 37559884 37559994 37559884 ID=Msa1152260-mRNA-1:cds;Parent=Msa1152260-mRNA-1
chr7_4 three_prime_UTR 37559995 37560173 37559995 ID=Msa1152260-mRNA-1:three_prime_utr;Parent=Msa1152260-mRNA-1
Gene Sequence

>Msa1152260

ATGGCAACTTCAGAAGTTGCAAATGGCAACCACTTAAGTGAGACAAAGGGAAAGACCATTACTTGCAAAGCTGCTGTGGCACATGGTCCAGGAGAACCCTTTGTAGTGGAACAAATTCTTGTACAACCTCCTCAGAAAATGGAGGTTAGAATCAAGATCCTATATACTTCCATTTGTCACACTGATCTCAGTGGTTGGAAAGGAGAGGTTGCAGAAGGGGCACGAGCCAGAGGTGCTTCAAAAATAATAGGTGTGGATATTAACCCAGACAAATTCAATACCACAGCCAAAACATTAGGAATCACAGACTTCATAAATCCAAAGGATGAAGAGAAGCCGGTATACGAGATAATCAGAGAAATGACTGAAGGAGGTGTAGACTATAGTTTTGAATGTACCGGAAATTTGAACGTTCTAAGAGATAGCTTCTTGTCTGGTTGGGGATTGACTGTACTATTGGGAATTCATGGATCACCAAAGTTGCTTCCCATCCACCCGATGGAGCTCTTTGATGGTCGCAGAATCGAAGGTTCGGTGTTCGGAGGTTTCAAAGGCAAAAGTCAATTGCCTAATCTTGCCACAGAATGCATGAAAGGGGCGATAAAGCTGGATAATTTCATCACTCACGAGCTTCCCTTTGACGAGATAAACCAAGCGTTCGATCTCTTGATTGCAGGGAAGTCATTGAGATCCTTTGTGGCAAATGCTCCAGGAGAACCCTTGGTAATGCAACAAATTCATGTACAACCTCCTCAGAAAATGGAGGTTAGAATCAAGATCCTCTATACTTCCATTTGTCACACCGATCTCAGTGGTTGGAAAGGCGAGTCTGAACCTCAACGTGCTTTTCCTCGGATTTTTGGCCATGAAGCTTCCGGGATTGTGGAGAGTGTAGGGGAAGGAGTGAAAGACTTAAAAGAAAATGACAAAGTGGTGCTAATATTCAACGGGGAGTGTGGTGAGTGTAATTACTGCAAGTGTGAGAAAACCAACATGTGTGAGAAGTATGGTGTAAACATAATGAAGAGACTAATGTGTGATGGTACAAGTAGATTCTCTACAATAGATGGAAAACTCATTTACCATTTCTTGAACTCTTCAACTTTCACTGAGTACACAGTGGTGGATTCAGGTTGTGCTCTTAAGCTCAACACTGAAGACACCCTTAGCCTCAAAAAACTCACCTTGCTTAGTTGTGGAGTTTCCACAGGAATTGGAGCTGCTTGGAATAATGCTAATGTGCATGCTGGTTCTTCTGTAGCAATCTTTGGTTTAGGTGCAATAGGGCTCGCTAGAATCAGAGAAATGACTGGGGGAGGTGTACACTACAGTTTTGAATGCACAGGAAATGTGAACGTTTTAAGGGATTCCTTCTTGTCCTGTCATGAGGGTTGGGGATTGACTGTACTACTGGGAATTCATGCATCACCAAAGTTACTTCCTCTCCACCCAATGGAGCTCTTTGATGGCCGCAAAATCGAAGGATCGGTCTTTGGAGGTTTCAAAGGCAAAAGTCAATTGCCTAATCTTGCCACAGAATGCATGAAAGGGGCGATAAAGTTGGATGATTTCATCACTCACGAACTTCCCTTTGACGAGATAAACAAAGCCTTCGATCTTTTGATTGCCGGGAAGTCACTGAGATGTCTTCTGACACTCTAA
Protein sequence

>Msa1152260

MATSEVANGNHLSETKGKTITCKAAVAHGPGEPFVVEQILVQPPQKMEVRIKILYTSICHTDLSGWKGEVAEGARARGASKIIGVDINPDKFNTTAKTLGITDFINPKDEEKPVYEIIREMTEGGVDYSFECTGNLNVLRDSFLSGWGLTVLLGIHGSPKLLPIHPMELFDGRRIEGSVFGGFKGKSQLPNLATECMKGAIKLDNFITHELPFDEINQAFDLLIAGKSLRSFVANAPGEPLVMQQIHVQPPQKMEVRIKILYTSICHTDLSGWKGESEPQRAFPRIFGHEASGIVESVGEGVKDLKENDKVVLIFNGECGECNYCKCEKTNMCEKYGVNIMKRLMCDGTSRFSTIDGKLIYHFLNSSTFTEYTVVDSGCALKLNTEDTLSLKKLTLLSCGVSTGIGAAWNNANVHAGSSVAIFGLGAIGLARIREMTGGGVHYSFECTGNVNVLRDSFLSCHEGWGLTVLLGIHASPKLLPLHPMELFDGRKIEGSVFGGFKGKSQLPNLATECMKGAIKLDDFITHELPFDEINKAFDLLIAGKSLRCLLTL*