AlfalfaGEDB | Msa0201500

M. sativa cultivar zhongmu-4 / Msa0201500

KEGG: K12128|K14689
GO: GO:0000041 GO:0000325 GO:0003674 GO:0005215 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006873 GO:0006875 GO:0006882 GO:0008150 GO:0008324 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0015075 GO:0015318 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031090 GO:0032879 GO:0034220 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0046916 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0061088 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0072503 GO:0072507 GO:0072509 GO:0072511 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805
PFAM: PF01545.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0201500	ACR54455.1	98.775	408	5	0	1	408	1	408	0.0	812

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0201500	sp\|Q9ZT63\|MTP1_ARATH	68.750	416	104	4	1	408	1	398	8.20e-179	506

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0201500	C9WEK2	98.775	408	5	0	1	408	1	408	0.0	812

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003700	Msa0201500	0.809222	2.104657e-50	-8.615850e-47
Msa0026430	Msa0201500	0.804242	2.372985e-49	-8.615850e-47
Msa0035150	Msa0201500	0.812241	4.680840e-51	-8.615850e-47
Msa0043560	Msa0201500	0.808482	3.030924e-50	-8.615850e-47
Msa0046100	Msa0201500	0.836346	9.874824e-57	-8.615850e-47
Msa0061340	Msa0201500	0.802449	5.580516e-49	-8.615850e-47
Msa0089360	Msa0201500	0.802609	5.172481e-49	-8.615850e-47
Msa0097840	Msa0201500	0.844730	6.306896e-59	-8.615850e-47
Msa0127800	Msa0201500	0.814397	1.573433e-51	-8.615850e-47
Msa0146260	Msa0201500	0.804459	2.138259e-49	-8.615850e-47
Msa0152400	Msa0201500	0.804730	1.877445e-49	-8.615850e-47
Msa0201500	Msa0225680	0.804001	2.663808e-49	-8.615850e-47
Msa0201500	Msa0244110	0.930244	2.172318e-93	-8.615850e-47
Msa0201500	Msa0244160	0.933288	2.358657e-95	-8.615850e-47
Msa0201500	Msa0376350	0.812248	4.665174e-51	-8.615850e-47
Msa0201500	Msa0378980	0.803924	2.763551e-49	-8.615850e-47
Msa0201500	Msa0417360	0.833153	6.281171e-56	-8.615850e-47
Msa0201500	Msa0469850	0.809817	1.568862e-50	-8.615850e-47
Msa0201500	Msa0475790	0.803448	3.469978e-49	-8.615850e-47
Msa0201500	Msa0495320	0.824677	7.090340e-54	-8.615850e-47
Msa0201500	Msa0495330	0.819209	1.309937e-52	-8.615850e-47
Msa0201500	Msa0516170	0.805982	1.026192e-49	-8.615850e-47
Msa0201500	Msa0524500	0.807464	4.990092e-50	-8.615850e-47
Msa0201500	Msa0544830	0.810890	9.203984e-51	-8.615850e-47
Msa0201500	Msa0546300	0.842588	2.359819e-58	-8.615850e-47
Msa0201500	Msa0576880	0.812133	4.941652e-51	-8.615850e-47
Msa0201500	Msa0587940	0.807155	5.803359e-50	-8.615850e-47
Msa0201500	Msa0600430	0.800571	1.354067e-48	-8.615850e-47
Msa0201500	Msa0615710	0.811954	5.405746e-51	-8.615850e-47
Msa0201500	Msa0638540	0.809229	2.098126e-50	-8.615850e-47
Msa0201500	Msa0642720	0.852350	4.889183e-61	-8.615850e-47
Msa0201500	Msa0657750	0.816652	4.952021e-52	-8.615850e-47
Msa0201500	Msa0681800	0.836213	1.067457e-56	-8.615850e-47
Msa0201500	Msa0683730	0.800534	1.378051e-48	-8.615850e-47
Msa0201500	Msa0703050	0.814418	1.556578e-51	-8.615850e-47
Msa0201500	Msa0711130	0.809027	2.317405e-50	-8.615850e-47
Msa0201500	Msa0713820	0.806594	7.625451e-50	-8.615850e-47
Msa0201500	Msa0728630	0.808525	2.967803e-50	-8.615850e-47
Msa0201500	Msa0740640	0.817585	3.054803e-52	-8.615850e-47
Msa0201500	Msa0756060	0.808270	3.362819e-50	-8.615850e-47
Msa0201500	Msa0795250	0.820136	8.044446e-53	-8.615850e-47
Msa0201500	Msa0813860	0.830810	2.380613e-55	-8.615850e-47
Msa0201500	Msa0828920	0.816352	5.779706e-52	-8.615850e-47
Msa0201500	Msa0832340	0.808397	3.160240e-50	-8.615850e-47
Msa0201500	Msa0832700	0.802007	6.881042e-49	-8.615850e-47
Msa0201500	Msa0868440	0.806343	8.612458e-50	-8.615850e-47
Msa0201500	Msa0938480	0.824486	7.864935e-54	-8.615850e-47
Msa0201500	Msa0945110	0.808143	3.579376e-50	-8.615850e-47
Msa0201500	Msa0969520	0.836465	9.211477e-57	-8.615850e-47
Msa0201500	Msa1004010	0.806236	9.071574e-50	-8.615850e-47
Msa0201500	Msa1046280	0.804959	1.681418e-49	-8.615850e-47
Msa0201500	Msa1048160	0.816815	4.553540e-52	-8.615850e-47
Msa0201500	Msa1098120	0.821351	4.228447e-53	-8.615850e-47
Msa0201500	Msa1100050	0.802988	4.319400e-49	-8.615850e-47
Msa0201500	Msa1135470	0.812248	4.665174e-51	-8.615850e-47
Msa0201500	Msa1137570	0.819140	1.358011e-52	-8.615850e-47
Msa0201500	Msa1152260	0.813228	2.847109e-51	-8.615850e-47
Msa0201500	Msa1179940	0.810813	9.563208e-51	-8.615850e-47
Msa0201500	Msa1179970	0.813162	2.942837e-51	-8.615850e-47
Msa0201500	Msa1188710	0.800227	1.590708e-48	-8.615850e-47
Msa0201500	Msa1196440	0.804801	1.814131e-49	-8.615850e-47
Msa0201500	Msa1199570	0.818413	1.986124e-52	-8.615850e-47
Msa0201500	Msa1231820	0.802242	6.156203e-49	-8.615850e-47
Msa0201500	Msa1236100	0.826389	2.786839e-54	-8.615850e-47
Msa0201500	Msa1243640	0.847390	1.191795e-59	-8.615850e-47
Msa0201500	Msa1250530	0.848473	5.992109e-60	-8.615850e-47
Msa0201500	Msa1255190	0.807542	4.803293e-50	-8.615850e-47
Msa0201500	Msa1269480	0.812462	4.189001e-51	-8.615850e-47
Msa0201500	Msa1274520	0.800289	1.545630e-48	-8.615850e-47
Msa0201500	Msa1279400	0.803803	2.928393e-49	-8.615850e-47
Msa0201500	Msa1284040	0.819077	1.403821e-52	-8.615850e-47
Msa0201500	Msa1328640	0.811770	5.927804e-51	-8.615850e-47
Msa0201500	Msa1328710	0.819019	1.447084e-52	-8.615850e-47
Msa0201500	Msa1336710	0.823977	1.035507e-53	-8.615850e-47
Msa0201500	Msa1340020	0.805110	1.563379e-49	-8.615850e-47
Msa0201500	Msa1353470	0.818746	1.669045e-52	-8.615850e-47
Msa0201500	Msa1435270	0.823912	1.073019e-53	-8.615850e-47
Msa0201500	Msa1454570	0.808401	3.153359e-50	-8.615850e-47
Msa0201500	Msa1465300	0.800358	1.496580e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0201500	MtrunA17_Chr2g0297881	97.549	408	9	1	1	408	2	408	0.0	795
Msa0201500	MtrunA17_Chr8g0345881	77.206	408	70	4	1	408	2	386	0.0	556
Msa0201500	MtrunA17_Chr4g0032191	47.368	380	175	4	31	407	37	394	3.48e-100	303

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0201500	AT2G46800.5	68.750	416	104	4	1	408	1	398	8.33e-180	506
Msa0201500	AT2G46800.1	68.750	416	104	4	1	408	1	398	8.33e-180	506
Msa0201500	AT2G46800.3	68.750	416	104	4	1	408	1	398	8.33e-180	506
Msa0201500	AT2G46800.4	68.750	416	104	4	1	408	1	398	8.33e-180	506
Msa0201500	AT2G46800.2	68.750	416	104	4	1	408	1	398	8.33e-180	506
Msa0201500	AT3G58810.1	66.835	395	93	4	15	408	74	431	6.16e-168	478
Msa0201500	AT3G58810.2	66.835	395	93	4	15	408	35	392	7.44e-168	476
Msa0201500	AT3G61940.1	71.341	164	42	1	245	408	176	334	3.24e-74	235
Msa0201500	AT3G61940.1	67.320	153	46	2	24	175	7	156	4.40e-65	211
Msa0201500	AT2G29410.1	50.000	146	73	0	31	176	36	181	4.81e-43	155
Msa0201500	AT2G04620.1	28.608	395	227	10	33	383	386	769	5.53e-33	131
Msa0201500	AT2G04620.2	29.134	381	229	9	33	381	218	589	8.55e-31	124
Msa0201500	AT1G33020.1	62.069	58	18	1	351	408	491	544	7.73e-14	73.6

Find 119 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAGAGTTGGAAGCAGAATT+TGG	0.206519	2_1:+23054042	Msa0201500:five_prime_UTR
ATCATTATGGCTTTGGTATT+GGG	0.244966	2_1:+23056794	Msa0201500:CDS
TGGTTTCTATGCAATTAATA+TGG	0.258906	2_1:+23056660	Msa0201500:CDS
TCCAGCCCATATAGAAAATA+AGG	0.287725	2_1:-23056576	None:intergenic
TATGTTCCGTTTCTTCTTCT+CGG	0.293379	2_1:-23057068	None:intergenic
CATCATTATGGCTTTGGTAT+TGG	0.295955	2_1:+23056793	Msa0201500:CDS
TGAGGTAGTTGGTGGTATTA+AGG	0.314580	2_1:+23056487	Msa0201500:CDS
ATGGGGAAGTTTGAACTTAC+AGG	0.320283	2_1:+23057706	Msa0201500:three_prime_UTR
TTTCGTACTCCTTTGTTTGT+TGG	0.320701	2_1:-23054089	None:intergenic
CAACATGCTGAGAAACATTC+TGG	0.322869	2_1:+23057246	Msa0201500:CDS
GAGGTTACTGAACCACTTCT+TGG	0.325560	2_1:+23057028	Msa0201500:CDS
CAATTAATATGGCTGCTTGC+TGG	0.329178	2_1:+23056671	Msa0201500:CDS
CCGAATCCTCGTCAGTCATT+TGG	0.330373	2_1:+23056608	Msa0201500:CDS
CTGTTCATGAGCTGCACATA+TGG	0.341164	2_1:+23057350	Msa0201500:CDS
TCAGATTCAAAAGGGGCTAT+TGG	0.341343	2_1:+23057309	Msa0201500:CDS
GATGGATTTAGTTTAGACTA+TGG	0.343040	2_1:+23057559	Msa0201500:three_prime_UTR
TTTGTTTAGTGATGATTTGA+TGG	0.363040	2_1:+23057537	Msa0201500:three_prime_UTR
TCTTGTGGTGAACATCATTA+TGG	0.376777	2_1:+23056781	Msa0201500:CDS
AATAGAGATTCTTGGTGCTT+TGG	0.384622	2_1:+23056640	Msa0201500:CDS
CAGAGTATTGGTGTAATGAT+TGG	0.384953	2_1:+23057133	Msa0201500:CDS
AGAGTATTGGTGTAATGATT+GGG	0.403737	2_1:+23057134	Msa0201500:CDS
AAACATTCTGGAAGTCTTGA+TGG	0.415617	2_1:+23057258	Msa0201500:CDS
ATGTTTGTAGTTGCTGCATT+TGG	0.417750	2_1:+23056758	Msa0201500:CDS
GGTGAACATCATTATGGCTT+TGG	0.430114	2_1:+23056787	Msa0201500:CDS
AATTAATATGGCTGCTTGCT+GGG	0.433529	2_1:+23056672	Msa0201500:CDS
CCAAATGACTGACGAGGATT+CGG	0.433628	2_1:-23056608	None:intergenic
GCCATTGCTAGACTCATTGC+AGG	0.434083	2_1:+23056710	Msa0201500:CDS
CAGTAACCTCTTTGTGGTCA+TGG	0.441794	2_1:-23057015	None:intergenic
ATGTTCCGTTTCTTCTTCTC+GGG	0.446423	2_1:-23057067	None:intergenic
TTCATGTCCGTTGAGGTAGT+TGG	0.447396	2_1:+23056476	Msa0201500:CDS
TTTCTATATGGGCTGGAGGA+TGG	0.450599	2_1:+23056582	Msa0201500:CDS
TTCTATATGGGCTGGAGGAT+GGG	0.456683	2_1:+23056583	Msa0201500:CDS
CATGGCCATGGCCGTGATCA+TGG	0.461736	2_1:-23056817	None:intergenic
GGTGCGCATCATCATGAGTA+TGG	0.464413	2_1:-23056985	None:intergenic
ATCACATCAGCGTCTGCTTC+AGG	0.464844	2_1:-23057421	None:intergenic
TTTGGGGTTTATTCGGAGTG+TGG	0.467772	2_1:-23053998	None:intergenic
TTGGGGTTTATTCGGAGTGT+GGG	0.469683	2_1:-23053997	None:intergenic
GGGGCATATCTCCACGTACT+TGG	0.471011	2_1:+23057100	Msa0201500:CDS
AGATGCTACTCAGATTCAAA+AGG	0.472347	2_1:+23057300	Msa0201500:CDS
CTGGGATAATATTGCGAACA+TGG	0.474282	2_1:+23057687	Msa0201500:three_prime_UTR
GCCGACCCGAGAAGAAGAAA+CGG	0.483223	2_1:+23057062	Msa0201500:CDS
AAGCACCAAGAATCTCTATT+CGG	0.486057	2_1:-23056637	None:intergenic
TTTAGTGATGATTTGATGGA+TGG	0.488504	2_1:+23057541	Msa0201500:three_prime_UTR
CCACTTCTTGGTGAATCAAA+AGG	0.490972	2_1:+23057040	Msa0201500:CDS
CCATGTGAGTTCTCAGATGC+AGG	0.494225	2_1:+23056377	Msa0201500:CDS
TCATATGGTATAAACCTGAA+TGG	0.495450	2_1:+23057164	Msa0201500:CDS
CACATATGGGCCATTACAGT+GGG	0.495527	2_1:+23057364	Msa0201500:CDS
CAATACCTTCCCCACTGTAA+TGG	0.500293	2_1:-23057374	None:intergenic
ATGTCCGTTGAGGTAGTTGG+TGG	0.504771	2_1:+23056479	Msa0201500:CDS
AGCAGACGCTGATGTGATGC+TGG	0.509043	2_1:+23057426	Msa0201500:CDS
GATGCTACTCAGATTCAAAA+GGG	0.519531	2_1:+23057301	Msa0201500:CDS
CATGATCACGGCCATGGCCA+TGG	0.520047	2_1:+23056818	Msa0201500:CDS
ACAAGGTCGTAGACTACATC+AGG	0.528566	2_1:+23057449	Msa0201500:CDS
TCTCAGCATGTTGATAGTTG+TGG	0.528970	2_1:-23057236	None:intergenic
TCAAAAGGGGCTATTGGAGA+TGG	0.528979	2_1:+23057315	Msa0201500:CDS
ATGATGCTCATCTGTATGCT+TGG	0.529964	2_1:-23056900	None:intergenic
TGATTTCAATTATTTGCCCA+TGG	0.531617	2_1:-23056310	None:intergenic
TTGGTATTGGGCCATGATCA+CGG	0.532393	2_1:+23056806	Msa0201500:CDS
TTGGGCCATGATCACGGCCA+TGG	0.533606	2_1:+23056812	Msa0201500:CDS
CTTTGTGGTCATGGTCATGA+TGG	0.535439	2_1:-23057006	None:intergenic
AACAATATAAACGAAAGAGT+TGG	0.542850	2_1:+23054029	Msa0201500:five_prime_UTR
AGTTGCTGCATTTGGTCTTG+TGG	0.544560	2_1:+23056766	Msa0201500:CDS
CGTGATCATGTCCATGGCCA+TGG	0.547666	2_1:-23056829	None:intergenic
CAATCATTACACCAATACTC+TGG	0.548068	2_1:-23057132	None:intergenic
TCCGTTTCTTCTTCTCGGGT+CGG	0.548332	2_1:-23057063	None:intergenic
ATGTAGGAAGGAAAATTTGT+GGG	0.548918	2_1:+23056348	Msa0201500:CDS
GGACATGAAAATAACGCAAA+GGG	0.552650	2_1:-23056462	None:intergenic
GCAGGTCCTCAAGAAGTGGA+TGG	0.553959	2_1:+23056728	Msa0201500:CDS
CAGGTCCTCAAGAAGTGGAT+GGG	0.559249	2_1:+23056729	Msa0201500:CDS
GTGGTTCAGTAACCTCTTTG+TGG	0.561769	2_1:-23057021	None:intergenic
AGTGGAGAACTCCCTGATGT+AGG	0.568018	2_1:+23056332	Msa0201500:CDS
AAACGGAACATAAATGTACA+TGG	0.573750	2_1:+23057079	Msa0201500:CDS
TGTTCATGAGCTGCACATAT+GGG	0.573784	2_1:+23057351	Msa0201500:CDS
CATTGCAGGTCCTCAAGAAG+TGG	0.575236	2_1:+23056724	Msa0201500:CDS
GGAGACTCTATCCAGAGTAT+TGG	0.578371	2_1:+23057121	Msa0201500:CDS
CATGGCCATGGACATGATCA+CGG	0.583188	2_1:+23056830	Msa0201500:CDS
CATGGACATGATCACGGCCA+CGG	0.584750	2_1:+23056836	Msa0201500:CDS
TGGGATAATATTGCGAACAT+GGG	0.590170	2_1:+23057688	Msa0201500:three_prime_UTR
ATGGGCCATTACAGTGGGGA+AGG	0.591116	2_1:+23057369	Msa0201500:CDS
GAGTATTGGTGTAATGATTG+GGG	0.591360	2_1:+23057135	Msa0201500:CDS
GGGCAAATAATTGAAATCAG+TGG	0.595396	2_1:+23056314	Msa0201500:CDS
CCATATAGAAAATAAGGAGA+TGG	0.595760	2_1:-23056570	None:intergenic
AAGAAACAACCAACAAACAA+AGG	0.596231	2_1:+23054080	Msa0201500:five_prime_UTR
CGCTGATGTGATGCTGGACA+AGG	0.600547	2_1:+23057432	Msa0201500:CDS
ACCTGCAATGAGTCTAGCAA+TGG	0.601692	2_1:-23056711	None:intergenic
ATTGGAGATGGAAGAAGTAG+TGG	0.601966	2_1:+23057327	Msa0201500:CDS
AAACTGAAATACCATGGCTG+TGG	0.606255	2_1:-23056874	None:intergenic
CGTGGCCGTGATCATGTCCA+TGG	0.606876	2_1:-23056835	None:intergenic
GAGAACTCCCTGATGTAGGA+AGG	0.609906	2_1:+23056336	Msa0201500:CDS
AAGCACAAAGTGGTCACCAT+GGG	0.612715	2_1:+23056294	Msa0201500:CDS
TGGGGAAGTTTGAACTTACA+GGG	0.613955	2_1:+23057707	Msa0201500:three_prime_UTR
GATGTAGGAAGGAAAATTTG+TGG	0.619238	2_1:+23056347	Msa0201500:CDS
AACGGAACATAAATGTACAT+GGG	0.622867	2_1:+23057080	Msa0201500:CDS
GGCCACGGACATGATCATCA+TGG	0.626939	2_1:+23056851	Msa0201500:CDS
TTTCGAAGGATTCTGAAGAA+CGG	0.630672	2_1:+23056405	Msa0201500:CDS
CCTGCATCTGAGAACTCACA+TGG	0.630931	2_1:-23056377	None:intergenic
AGATGCAGGATCTATTTCGA+AGG	0.632610	2_1:+23056391	Msa0201500:CDS
GCACATATGGGCCATTACAG+TGG	0.634593	2_1:+23057363	Msa0201500:CDS
CGGACATGAAAATAACGCAA+AGG	0.635615	2_1:-23056463	None:intergenic
AATACCACCAACTACCTCAA+CGG	0.636394	2_1:-23056483	None:intergenic
GAAGCACAAAGTGGTCACCA+TGG	0.639833	2_1:+23056293	Msa0201500:CDS
GCGAAAGCTTCTGATAGCAG+TGG	0.645701	2_1:+23056439	Msa0201500:CDS
GGGATAATATTGCGAACATG+GGG	0.648396	2_1:+23057689	Msa0201500:three_prime_UTR
TCATGACCATGACCACAAAG+AGG	0.650002	2_1:+23057009	Msa0201500:CDS
GATCATCATGGCCACAGCCA+TGG	0.655433	2_1:+23056863	Msa0201500:CDS
TGAGTAGCATCTATCTCGCG+TGG	0.657042	2_1:-23057289	None:intergenic
GGATAGAGTCTCCAAGTACG+TGG	0.658730	2_1:-23057111	None:intergenic
AGGTCGTAGACTACATCAGG+AGG	0.671694	2_1:+23057452	Msa0201500:CDS
ATGCTACTCAGATTCAAAAG+GGG	0.673395	2_1:+23057302	Msa0201500:CDS
ACGGAACATAAATGTACATG+GGG	0.674674	2_1:+23057081	Msa0201500:CDS
TTGCAGATGGAAGCACAAAG+TGG	0.690821	2_1:+23056284	Msa0201500:intron
TGTAGGAAGGAAAATTTGTG+GGG	0.696003	2_1:+23056349	Msa0201500:CDS
GATGAGCATCATCACACACA+TGG	0.698036	2_1:+23056911	Msa0201500:CDS
AGTATTGGTGTAATGATTGG+GGG	0.700635	2_1:+23057136	Msa0201500:CDS
TGGTAGAAACTGAAATACCA+TGG	0.701092	2_1:-23056880	None:intergenic
GGCCATGATGATCATGTCCG+TGG	0.701854	2_1:-23056853	None:intergenic
GCGCATCATCATGAGTATGG+TGG	0.706117	2_1:-23056982	None:intergenic
GGTCGTAGACTACATCAGGA+GGG	0.723067	2_1:+23057453	Msa0201500:CDS
ACATATGGGCCATTACAGTG+GGG	0.768745	2_1:+23057365	Msa0201500:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTTATTAATTCTTTTTTG+TGG	+	chr2_1:23054240-23054259	Msa0201500:intron	10.0%
!!!	TATATTGTTGTTTTTGTTTT+GGG	-	chr2_1:23054018-23054037	None:intergenic	15.0%
!!!	TTATATTGTTGTTTTTGTTT+TGG	-	chr2_1:23054019-23054038	None:intergenic	15.0%
!!	CAAAATAATAATAGAATAGA+AGG	-	chr2_1:23054394-23054413	None:intergenic	15.0%
!!!	AATTTTAATACAAAGAAAGA+GGG	-	chr2_1:23054590-23054609	None:intergenic	15.0%
!!!	AAATGATATATTATTTTCCA+TGG	-	chr2_1:23055082-23055101	None:intergenic	15.0%
!!	ATGGAAAATAATATATCATT+TGG	+	chr2_1:23055081-23055100	Msa0201500:intron	15.0%
!!	TATTTCAGTATAATTGTATA+AGG	+	chr2_1:23055233-23055252	Msa0201500:intron	15.0%
!!!	TTTGGTAATTTAAGATAATT+AGG	+	chr2_1:23055619-23055638	Msa0201500:intron	15.0%
!!!	TTGGTAATTTAAGATAATTA+GGG	+	chr2_1:23055620-23055639	Msa0201500:intron	15.0%
!!!	TAATTTTATTACAGACAATT+AGG	-	chr2_1:23055883-23055902	None:intergenic	15.0%
!!!	AAATGTTTTATAAAAACTAC+TGG	+	chr2_1:23056074-23056093	Msa0201500:intron	15.0%
!!!	ATATTGTTGTTTTTGTTTTG+GGG	-	chr2_1:23054017-23054036	None:intergenic	20.0%
!!!	ACAAATTTATGTGAGATTTT+AGG	+	chr2_1:23054423-23054442	Msa0201500:intron	20.0%
!!!	GAATTTTAATACAAAGAAAG+AGG	-	chr2_1:23054591-23054610	None:intergenic	20.0%
!!	CTTTCTTTGTATTAAAATTC+CGG	+	chr2_1:23054591-23054610	Msa0201500:intron	20.0%
!!	TTTCTTTGTATTAAAATTCC+GGG	+	chr2_1:23054592-23054611	Msa0201500:intron	20.0%
!!	AGTTAGCAATTTCATTTATA+TGG	+	chr2_1:23054640-23054659	Msa0201500:intron	20.0%
!!!	AATTCTTTTGGATTATGAAA+AGG	-	chr2_1:23055111-23055130	None:intergenic	20.0%
!!	ATATATAAATAATCGAAGAG+AGG	+	chr2_1:23055587-23055606	Msa0201500:intron	20.0%
!!	ATTGTTCTATAATAATCAAG+AGG	+	chr2_1:23055851-23055870	Msa0201500:intron	20.0%
!!!	TTTCTGATTTGATAATTTGT+TGG	+	chr2_1:23056032-23056051	Msa0201500:intron	20.0%
!!!	TTCCTGTTTCTTTTTATTTA+TGG	+	chr2_1:23056159-23056178	Msa0201500:intron	20.0%
!!	TTTCATTAATATATTGCAGA+TGG	+	chr2_1:23056271-23056290	Msa0201500:intron	20.0%
!!	AAATCATCACTAAACAAAAA+AGG	-	chr2_1:23057535-23057554	None:intergenic	20.0%
!!!	TTTTTGTTTTGGGGTTTATT+CGG	-	chr2_1:23054008-23054027	None:intergenic	25.0%
!	AACAATATAAACGAAAGAGT+TGG	+	chr2_1:23054029-23054048	Msa0201500:five_prime_UTR	25.0%
!	AAAGAGATAAGATTAAGGAA+CGG	-	chr2_1:23054161-23054180	None:intergenic	25.0%
!	GTAAGAAAGAGATAAGATTA+AGG	-	chr2_1:23054166-23054185	None:intergenic	25.0%
!	ATAATAGAATAGAAGGTTCT+AGG	-	chr2_1:23054387-23054406	None:intergenic	25.0%
!!!	AGAAACCTGAATATTGATTT+TGG	+	chr2_1:23054763-23054782	Msa0201500:intron	25.0%
!!!	GAAACCTGAATATTGATTTT+GGG	+	chr2_1:23054764-23054783	Msa0201500:intron	25.0%
!!	ATAAATTTTGTGAGACTGTT+TGG	+	chr2_1:23054824-23054843	Msa0201500:intron	25.0%
!!	TAAATTTTGTGAGACTGTTT+GGG	+	chr2_1:23054825-23054844	Msa0201500:intron	25.0%
!!	AATCCAAAAGAATTTTCAGA+AGG	+	chr2_1:23055117-23055136	Msa0201500:intron	25.0%
!!	TTTGATTGACTTAGTCTTTA+AGG	+	chr2_1:23055312-23055331	Msa0201500:intron	25.0%
!	TGTGAATAATGCATTGAAAA+AGG	+	chr2_1:23055417-23055436	Msa0201500:intron	25.0%
!	TAATGCATTGAAAAAGGAAA+AGG	+	chr2_1:23055423-23055442	Msa0201500:intron	25.0%
!	TTGCTTTGATTATAGAACAA+AGG	+	chr2_1:23055691-23055710	Msa0201500:intron	25.0%
!	TGCTTTGATTATAGAACAAA+GGG	+	chr2_1:23055692-23055711	Msa0201500:intron	25.0%
!	TAAGAGACTTAAGTAGTTAA+TGG	-	chr2_1:23055790-23055809	None:intergenic	25.0%
!!	TGTTTTATAAAAACTACTGG+TGG	+	chr2_1:23056077-23056096	Msa0201500:intron	25.0%
!	TTAGATGTTGAATTGGATAA+TGG	+	chr2_1:23056102-23056121	Msa0201500:intron	25.0%
!	AGCCATAAATAAAAAGAAAC+AGG	-	chr2_1:23056164-23056183	None:intergenic	25.0%
!	AACTGTACAATTCTGTTTAA+TGG	+	chr2_1:23056220-23056239	Msa0201500:intron	25.0%
!!!	CATCTCCTTATTTTCTATAT+GGG	+	chr2_1:23056571-23056590	Msa0201500:CDS	25.0%
!	TGGTTTCTATGCAATTAATA+TGG	+	chr2_1:23056660-23056679	Msa0201500:CDS	25.0%
!!	AATCTTTTCTGTAATTGTCT+TGG	+	chr2_1:23057213-23057232	Msa0201500:CDS	25.0%
!	TTTGTTTAGTGATGATTTGA+TGG	+	chr2_1:23057537-23057556	Msa0201500:three_prime_UTR	25.0%
!!	TCATACCAAATTTTTATGTC+TGG	+	chr2_1:23057668-23057687	Msa0201500:three_prime_UTR	25.0%
!!	CATACCAAATTTTTATGTCT+GGG	+	chr2_1:23057669-23057688	Msa0201500:three_prime_UTR	25.0%
!	TTATCCCAGACATAAAAATT+TGG	-	chr2_1:23057676-23057695	None:intergenic	25.0%
	AAGAAACAACCAACAAACAA+AGG	+	chr2_1:23054080-23054099	Msa0201500:five_prime_UTR	30.0%
!!	GATTTTAGGTCGATAATCAT+TGG	+	chr2_1:23054437-23054456	Msa0201500:intron	30.0%
!!!	ATATTGATTTTGGGCTTGTT+TGG	+	chr2_1:23054773-23054792	Msa0201500:intron	30.0%
	GCTTATTTGAGCTTATTTAC+TGG	+	chr2_1:23054800-23054819	Msa0201500:intron	30.0%
!	ATTATTTTCCATGGTCTGTT+TGG	-	chr2_1:23055073-23055092	None:intergenic	30.0%
!!	ACTCCTTCTGAAAATTCTTT+TGG	-	chr2_1:23055123-23055142	None:intergenic	30.0%
!	AATTTTCAGAAGGAGTCATT+AGG	+	chr2_1:23055127-23055146	Msa0201500:intron	30.0%
	GTATAATTGTATAAGGATGC+TGG	+	chr2_1:23055240-23055259	Msa0201500:intron	30.0%
	AATCAAAGCAAAGCAAATAG+AGG	-	chr2_1:23055299-23055318	None:intergenic	30.0%
	ATGCATTATTCACAAAAGCA+TGG	-	chr2_1:23055411-23055430	None:intergenic	30.0%
	CAGTACAAATGAGTCTTTAT+TGG	+	chr2_1:23055510-23055529	Msa0201500:intron	30.0%
!	TTAAGATAATTAGGGCCTTT+TGG	+	chr2_1:23055628-23055647	Msa0201500:intron	30.0%
!	ACAATAATCCAAAGCTTTGA+GGG	-	chr2_1:23055836-23055855	None:intergenic	30.0%
	AACAATAATCCAAAGCTTTG+AGG	-	chr2_1:23055837-23055856	None:intergenic	30.0%
!	AAACATTTAGACCTCTGAAA+TGG	-	chr2_1:23056062-23056081	None:intergenic	30.0%
!	TTTTGCTTCCATTTAATGCT+CGG	+	chr2_1:23056197-23056216	Msa0201500:intron	30.0%
	TGATTTCAATTATTTGCCCA+TGG	-	chr2_1:23056313-23056332	None:intergenic	30.0%
!	AAATTTTCCTTCCTACATCA+GGG	-	chr2_1:23056346-23056365	None:intergenic	30.0%
	ATGTAGGAAGGAAAATTTGT+GGG	+	chr2_1:23056348-23056367	Msa0201500:CDS	30.0%
	CCATATAGAAAATAAGGAGA+TGG	-	chr2_1:23056573-23056592	None:intergenic	30.0%
!!!	CCATCTCCTTATTTTCTATA+TGG	+	chr2_1:23056570-23056589	Msa0201500:CDS	30.0%
!	TTTTTCCGAATAGAGATTCT+TGG	+	chr2_1:23056632-23056651	Msa0201500:CDS	30.0%
!!	ATCATTATGGCTTTGGTATT+GGG	+	chr2_1:23056794-23056813	Msa0201500:CDS	30.0%
!	AATGCTTTTCATCATCATGA+TGG	-	chr2_1:23056949-23056968	None:intergenic	30.0%
	AAACGGAACATAAATGTACA+TGG	+	chr2_1:23057079-23057098	Msa0201500:CDS	30.0%
	AACGGAACATAAATGTACAT+GGG	+	chr2_1:23057080-23057099	Msa0201500:CDS	30.0%
!!	AGAGTATTGGTGTAATGATT+GGG	+	chr2_1:23057134-23057153	Msa0201500:CDS	30.0%
	TCATATGGTATAAACCTGAA+TGG	+	chr2_1:23057164-23057183	Msa0201500:CDS	30.0%
!	AAATCGACTATTTTCCATTC+AGG	-	chr2_1:23057181-23057200	None:intergenic	30.0%
	TTTAGTGATGATTTGATGGA+TGG	+	chr2_1:23057541-23057560	Msa0201500:three_prime_UTR	30.0%
!	GATGGATTTAGTTTAGACTA+TGG	+	chr2_1:23057559-23057578	Msa0201500:three_prime_UTR	30.0%
	AAAGAGTTGGAAGCAGAATT+TGG	+	chr2_1:23054042-23054061	Msa0201500:five_prime_UTR	35.0%
!	TTTCGTACTCCTTTGTTTGT+TGG	-	chr2_1:23054092-23054111	None:intergenic	35.0%
	TGAGAAATCTAATACGAACC+CGG	-	chr2_1:23054613-23054632	None:intergenic	35.0%
	CAAGCCCAAAATCAATATTC+AGG	-	chr2_1:23054771-23054790	None:intergenic	35.0%
!	TCAATGAAGTTTTCGCTACT+AGG	+	chr2_1:23055180-23055199	Msa0201500:intron	35.0%
!	AACAAAGTACAATGGTGTCA+AGG	-	chr2_1:23055388-23055407	None:intergenic	35.0%
	AAGCATGGAACAAAGTACAA+TGG	-	chr2_1:23055396-23055415	None:intergenic	35.0%
	CATAAATCGTACAAGCCAAT+TGG	-	chr2_1:23055546-23055565	None:intergenic	35.0%
	ATTATGTAGTAACCCTCTGA+GGG	-	chr2_1:23055966-23055985	None:intergenic	35.0%
	TATTATGTAGTAACCCTCTG+AGG	-	chr2_1:23055967-23055986	None:intergenic	35.0%
	AAGCTATTACGTAGTTGAAC+CGG	+	chr2_1:23055987-23056006	Msa0201500:intron	35.0%
	TCTAGTTGCAATTTCATTCC+CGG	-	chr2_1:23056009-23056028	None:intergenic	35.0%
	AAAAGAAACAGGAAGTTCTG+AGG	-	chr2_1:23056153-23056172	None:intergenic	35.0%
	GGGCAAATAATTGAAATCAG+TGG	+	chr2_1:23056314-23056333	Msa0201500:CDS	35.0%
!	CAAATTTTCCTTCCTACATC+AGG	-	chr2_1:23056347-23056366	None:intergenic	35.0%
	GATGTAGGAAGGAAAATTTG+TGG	+	chr2_1:23056347-23056366	Msa0201500:CDS	35.0%
	TGTAGGAAGGAAAATTTGTG+GGG	+	chr2_1:23056349-23056368	Msa0201500:CDS	35.0%
!	TTTCGAAGGATTCTGAAGAA+CGG	+	chr2_1:23056405-23056424	Msa0201500:CDS	35.0%
	GGACATGAAAATAACGCAAA+GGG	-	chr2_1:23056465-23056484	None:intergenic	35.0%
!!!	TCCTTATTTTCTATATGGGC+TGG	+	chr2_1:23056575-23056594	Msa0201500:CDS	35.0%
	TCCAGCCCATATAGAAAATA+AGG	-	chr2_1:23056579-23056598	None:intergenic	35.0%
!!!	TTATTTTCTATATGGGCTGG+AGG	+	chr2_1:23056578-23056597	Msa0201500:CDS	35.0%
	AAAAATCCAAATGACTGACG+AGG	-	chr2_1:23056617-23056636	None:intergenic	35.0%
	AAGCACCAAGAATCTCTATT+CGG	-	chr2_1:23056640-23056659	None:intergenic	35.0%
!!	AATAGAGATTCTTGGTGCTT+TGG	+	chr2_1:23056640-23056659	Msa0201500:CDS	35.0%
	AATTAATATGGCTGCTTGCT+GGG	+	chr2_1:23056672-23056691	Msa0201500:CDS	35.0%
	ATGTTTGTAGTTGCTGCATT+TGG	+	chr2_1:23056758-23056777	Msa0201500:CDS	35.0%
	TCTTGTGGTGAACATCATTA+TGG	+	chr2_1:23056781-23056800	Msa0201500:CDS	35.0%
!!	CATCATTATGGCTTTGGTAT+TGG	+	chr2_1:23056793-23056812	Msa0201500:CDS	35.0%
	TGGTAGAAACTGAAATACCA+TGG	-	chr2_1:23056883-23056902	None:intergenic	35.0%
	TATGTTCCGTTTCTTCTTCT+CGG	-	chr2_1:23057071-23057090	None:intergenic	35.0%
	ACGGAACATAAATGTACATG+GGG	+	chr2_1:23057081-23057100	Msa0201500:CDS	35.0%
	CAATCATTACACCAATACTC+TGG	-	chr2_1:23057135-23057154	None:intergenic	35.0%
!!	CAGAGTATTGGTGTAATGAT+TGG	+	chr2_1:23057133-23057152	Msa0201500:CDS	35.0%
!!	GAGTATTGGTGTAATGATTG+GGG	+	chr2_1:23057135-23057154	Msa0201500:CDS	35.0%
!!	AGTATTGGTGTAATGATTGG+GGG	+	chr2_1:23057136-23057155	Msa0201500:CDS	35.0%
!	AAACATTCTGGAAGTCTTGA+TGG	+	chr2_1:23057258-23057277	Msa0201500:CDS	35.0%
	AGATGCTACTCAGATTCAAA+AGG	+	chr2_1:23057300-23057319	Msa0201500:CDS	35.0%
	GATGCTACTCAGATTCAAAA+GGG	+	chr2_1:23057301-23057320	Msa0201500:CDS	35.0%
	ATGCTACTCAGATTCAAAAG+GGG	+	chr2_1:23057302-23057321	Msa0201500:CDS	35.0%
	TGGGATAATATTGCGAACAT+GGG	+	chr2_1:23057688-23057707	Msa0201500:three_prime_UTR	35.0%
	GCAGCTAATAAGATACTCCA+AGG	-	chr2_1:23054539-23054558	None:intergenic	40.0%
!!	GATTTTGGGCTTGTTTGGTT+TGG	+	chr2_1:23054778-23054797	Msa0201500:intron	40.0%
	CTGTTTATCCAAACAGACCA+TGG	+	chr2_1:23055062-23055081	Msa0201500:intron	40.0%
	TGTCTGTAAGCACTTTCTTG+TGG	+	chr2_1:23055457-23055476	Msa0201500:intron	40.0%
!!	ATTGGAGCTTGCTAACCAAT+TGG	+	chr2_1:23055528-23055547	Msa0201500:intron	40.0%
	GGCTTGTACGATTTATGATG+AGG	+	chr2_1:23055549-23055568	Msa0201500:intron	40.0%
!!	TTATAGAACAAAGGGCATCG+AGG	+	chr2_1:23055700-23055719	Msa0201500:intron	40.0%
!!	TATAGAACAAAGGGCATCGA+GGG	+	chr2_1:23055701-23055720	Msa0201500:intron	40.0%
	TGTGTGTGTGTGTGTGTAAT+CGG	-	chr2_1:23055742-23055761	None:intergenic	40.0%
	AGCTATTACGTAGTTGAACC+GGG	+	chr2_1:23055988-23056007	Msa0201500:intron	40.0%
	TTGTTGGTCATCCATTTCAG+AGG	+	chr2_1:23056048-23056067	Msa0201500:intron	40.0%
!	GGTGGTCTTAGATGTTGAAT+TGG	+	chr2_1:23056095-23056114	Msa0201500:intron	40.0%
	GTACAGTTCCGAGCATTAAA+TGG	-	chr2_1:23056208-23056227	None:intergenic	40.0%
	AGATGCAGGATCTATTTCGA+AGG	+	chr2_1:23056391-23056410	Msa0201500:CDS	40.0%
	CGGACATGAAAATAACGCAA+AGG	-	chr2_1:23056466-23056485	None:intergenic	40.0%
!!	CGTTATTTTCATGTCCGTTG+AGG	+	chr2_1:23056469-23056488	Msa0201500:CDS	40.0%
	AATACCACCAACTACCTCAA+CGG	-	chr2_1:23056486-23056505	None:intergenic	40.0%
!!	TGAGGTAGTTGGTGGTATTA+AGG	+	chr2_1:23056487-23056506	Msa0201500:CDS	40.0%
	CAATTAATATGGCTGCTTGC+TGG	+	chr2_1:23056671-23056690	Msa0201500:CDS	40.0%
	AAAAACCCATCCACTTCTTG+AGG	-	chr2_1:23056737-23056756	None:intergenic	40.0%
	GGTGAACATCATTATGGCTT+TGG	+	chr2_1:23056787-23056806	Msa0201500:CDS	40.0%
	AAACTGAAATACCATGGCTG+TGG	-	chr2_1:23056877-23056896	None:intergenic	40.0%
	ATGATGCTCATCTGTATGCT+TGG	-	chr2_1:23056903-23056922	None:intergenic	40.0%
!!	CCTTTTGATTCACCAAGAAG+TGG	-	chr2_1:23057043-23057062	None:intergenic	40.0%
	CCACTTCTTGGTGAATCAAA+AGG	+	chr2_1:23057040-23057059	Msa0201500:CDS	40.0%
	ATGTTCCGTTTCTTCTTCTC+GGG	-	chr2_1:23057070-23057089	None:intergenic	40.0%
!!	TCTCAGCATGTTGATAGTTG+TGG	-	chr2_1:23057239-23057258	None:intergenic	40.0%
	CAACATGCTGAGAAACATTC+TGG	+	chr2_1:23057246-23057265	Msa0201500:CDS	40.0%
	TCAGATTCAAAAGGGGCTAT+TGG	+	chr2_1:23057309-23057328	Msa0201500:CDS	40.0%
	ATTGGAGATGGAAGAAGTAG+TGG	+	chr2_1:23057327-23057346	Msa0201500:CDS	40.0%
	TGTTCATGAGCTGCACATAT+GGG	+	chr2_1:23057351-23057370	Msa0201500:CDS	40.0%
	CTGGGATAATATTGCGAACA+TGG	+	chr2_1:23057687-23057706	Msa0201500:three_prime_UTR	40.0%
	GGGATAATATTGCGAACATG+GGG	+	chr2_1:23057689-23057708	Msa0201500:three_prime_UTR	40.0%
	ATGGGGAAGTTTGAACTTAC+AGG	+	chr2_1:23057706-23057725	Msa0201500:three_prime_UTR	40.0%
	TGGGGAAGTTTGAACTTACA+GGG	+	chr2_1:23057707-23057726	Msa0201500:three_prime_UTR	40.0%
	TTGGGGTTTATTCGGAGTGT+GGG	-	chr2_1:23054000-23054019	None:intergenic	45.0%
!	TTTGGGGTTTATTCGGAGTG+TGG	-	chr2_1:23054001-23054020	None:intergenic	45.0%
!!	TCTGCGCTTATTTTCGACCT+TGG	+	chr2_1:23054519-23054538	Msa0201500:intron	45.0%
	TAGCTGCTGTATTCAACTCC+TGG	+	chr2_1:23054552-23054571	Msa0201500:intron	45.0%
	TGCTGTATTCAACTCCTGGA+AGG	+	chr2_1:23054556-23054575	Msa0201500:intron	45.0%
	GCTGTATTCAACTCCTGGAA+GGG	+	chr2_1:23054557-23054576	Msa0201500:intron	45.0%
	AGAGGGAAAAATACCCTTCC+AGG	-	chr2_1:23054573-23054592	None:intergenic	45.0%
	TAAGCACTTTCTTGTGGACG+TGG	+	chr2_1:23055463-23055482	Msa0201500:intron	45.0%
!!	GAAGAGAGGAGAGAAGTGTT+TGG	+	chr2_1:23055601-23055620	Msa0201500:intron	45.0%
!	AATTAGGGCCTTTTGGCATG+TGG	+	chr2_1:23055635-23055654	Msa0201500:intron	45.0%
!	ATTAGGGCCTTTTGGCATGT+GGG	+	chr2_1:23055636-23055655	Msa0201500:intron	45.0%
	ACCTATGACCCTCAAAGCTT+TGG	+	chr2_1:23055825-23055844	Msa0201500:intron	45.0%
!!	TCCAAAGCTTTGAGGGTCAT+AGG	-	chr2_1:23055829-23055848	None:intergenic	45.0%
	TATACTATCTCCTCCCTCAG+AGG	+	chr2_1:23055950-23055969	Msa0201500:intron	45.0%
	ATACTATCTCCTCCCTCAGA+GGG	+	chr2_1:23055951-23055970	Msa0201500:intron	45.0%
	GTTGATGCAGCTCCTATTAG+TGG	+	chr2_1:23056124-23056143	Msa0201500:intron	45.0%
!!	GTTCTGAGGACTCCACTAAT+AGG	-	chr2_1:23056139-23056158	None:intergenic	45.0%
!	TTGCAGATGGAAGCACAAAG+TGG	+	chr2_1:23056284-23056303	Msa0201500:intron	45.0%
	AAGCACAAAGTGGTCACCAT+GGG	+	chr2_1:23056294-23056313	Msa0201500:CDS	45.0%
	TTCATGTCCGTTGAGGTAGT+TGG	+	chr2_1:23056476-23056495	Msa0201500:CDS	45.0%
!!	TTTCTATATGGGCTGGAGGA+TGG	+	chr2_1:23056582-23056601	Msa0201500:CDS	45.0%
!!	TTCTATATGGGCTGGAGGAT+GGG	+	chr2_1:23056583-23056602	Msa0201500:CDS	45.0%
	CCAAATGACTGACGAGGATT+CGG	-	chr2_1:23056611-23056630	None:intergenic	45.0%
	ACCTGCAATGAGTCTAGCAA+TGG	-	chr2_1:23056714-23056733	None:intergenic	45.0%
!!	AGTTGCTGCATTTGGTCTTG+TGG	+	chr2_1:23056766-23056785	Msa0201500:CDS	45.0%
!	TTGGTATTGGGCCATGATCA+CGG	+	chr2_1:23056806-23056825	Msa0201500:CDS	45.0%
	GATGAGCATCATCACACACA+TGG	+	chr2_1:23056911-23056930	Msa0201500:CDS	45.0%
	CTTTGTGGTCATGGTCATGA+TGG	-	chr2_1:23057009-23057028	None:intergenic	45.0%
	TCATGACCATGACCACAAAG+AGG	+	chr2_1:23057009-23057028	Msa0201500:CDS	45.0%
	CAGTAACCTCTTTGTGGTCA+TGG	-	chr2_1:23057018-23057037	None:intergenic	45.0%
	GTGGTTCAGTAACCTCTTTG+TGG	-	chr2_1:23057024-23057043	None:intergenic	45.0%
	GAGGTTACTGAACCACTTCT+TGG	+	chr2_1:23057028-23057047	Msa0201500:CDS	45.0%
	GGAGACTCTATCCAGAGTAT+TGG	+	chr2_1:23057121-23057140	Msa0201500:CDS	45.0%
	TGATTGGGGGAGCAATCATA+TGG	+	chr2_1:23057149-23057168	Msa0201500:CDS	45.0%
	TCAAAAGGGGCTATTGGAGA+TGG	+	chr2_1:23057315-23057334	Msa0201500:CDS	45.0%
	CTGTTCATGAGCTGCACATA+TGG	+	chr2_1:23057350-23057369	Msa0201500:CDS	45.0%
	CACATATGGGCCATTACAGT+GGG	+	chr2_1:23057364-23057383	Msa0201500:CDS	45.0%
	ACATATGGGCCATTACAGTG+GGG	+	chr2_1:23057365-23057384	Msa0201500:CDS	45.0%
	CAATACCTTCCCCACTGTAA+TGG	-	chr2_1:23057377-23057396	None:intergenic	45.0%
	ACAAGGTCGTAGACTACATC+AGG	+	chr2_1:23057449-23057468	Msa0201500:CDS	45.0%
	AGGTCGTTGAGCGTCTGTAA+GGG	+	chr2_1:23055659-23055678	Msa0201500:intron	50.0%
	GTGTGTAATCGGAGCTAGCT+GGG	-	chr2_1:23055731-23055750	None:intergenic	50.0%
	TGTGTGTAATCGGAGCTAGC+TGG	-	chr2_1:23055732-23055751	None:intergenic	50.0%
!	ATGTAGTAACCCTCTGAGGG+AGG	-	chr2_1:23055963-23055982	None:intergenic	50.0%
	GAAGCACAAAGTGGTCACCA+TGG	+	chr2_1:23056293-23056312	Msa0201500:CDS	50.0%
	AGTGGAGAACTCCCTGATGT+AGG	+	chr2_1:23056332-23056351	Msa0201500:CDS	50.0%
	GAGAACTCCCTGATGTAGGA+AGG	+	chr2_1:23056336-23056355	Msa0201500:CDS	50.0%
	CCTGCATCTGAGAACTCACA+TGG	-	chr2_1:23056380-23056399	None:intergenic	50.0%
	CCATGTGAGTTCTCAGATGC+AGG	+	chr2_1:23056377-23056396	Msa0201500:CDS	50.0%
	GCGAAAGCTTCTGATAGCAG+TGG	+	chr2_1:23056439-23056458	Msa0201500:CDS	50.0%
	ATGTCCGTTGAGGTAGTTGG+TGG	+	chr2_1:23056479-23056498	Msa0201500:CDS	50.0%
	CCGAATCCTCGTCAGTCATT+TGG	+	chr2_1:23056608-23056627	Msa0201500:CDS	50.0%
	GCCATTGCTAGACTCATTGC+AGG	+	chr2_1:23056710-23056729	Msa0201500:CDS	50.0%
	CATTGCAGGTCCTCAAGAAG+TGG	+	chr2_1:23056724-23056743	Msa0201500:CDS	50.0%
	CAGGTCCTCAAGAAGTGGAT+GGG	+	chr2_1:23056729-23056748	Msa0201500:CDS	50.0%
	CATGGCCATGGACATGATCA+CGG	+	chr2_1:23056830-23056849	Msa0201500:CDS	50.0%
	GCGCATCATCATGAGTATGG+TGG	-	chr2_1:23056985-23057004	None:intergenic	50.0%
	GGTGCGCATCATCATGAGTA+TGG	-	chr2_1:23056988-23057007	None:intergenic	50.0%
	TCCGTTTCTTCTTCTCGGGT+CGG	-	chr2_1:23057066-23057085	None:intergenic	50.0%
	GGATAGAGTCTCCAAGTACG+TGG	-	chr2_1:23057114-23057133	None:intergenic	50.0%
	TGAGTAGCATCTATCTCGCG+TGG	-	chr2_1:23057292-23057311	None:intergenic	50.0%
	GCACATATGGGCCATTACAG+TGG	+	chr2_1:23057363-23057382	Msa0201500:CDS	50.0%
	ATCACATCAGCGTCTGCTTC+AGG	-	chr2_1:23057424-23057443	None:intergenic	50.0%
	AGGTCGTAGACTACATCAGG+AGG	+	chr2_1:23057452-23057471	Msa0201500:CDS	50.0%
	GGTCGTAGACTACATCAGGA+GGG	+	chr2_1:23057453-23057472	Msa0201500:CDS	50.0%
	ACGACCTCCCACATGCCAAA+AGG	-	chr2_1:23055646-23055665	None:intergenic	55.0%
	GAGGTCGTTGAGCGTCTGTA+AGG	+	chr2_1:23055658-23055677	Msa0201500:intron	55.0%
	GCAGGTCCTCAAGAAGTGGA+TGG	+	chr2_1:23056728-23056747	Msa0201500:CDS	55.0%
	CGTGATCATGTCCATGGCCA+TGG	-	chr2_1:23056832-23056851	None:intergenic	55.0%
	CATGGACATGATCACGGCCA+CGG	+	chr2_1:23056836-23056855	Msa0201500:CDS	55.0%
	GGCCACGGACATGATCATCA+TGG	+	chr2_1:23056851-23056870	Msa0201500:CDS	55.0%
	GGCCATGATGATCATGTCCG+TGG	-	chr2_1:23056856-23056875	None:intergenic	55.0%
	GATCATCATGGCCACAGCCA+TGG	+	chr2_1:23056863-23056882	Msa0201500:CDS	55.0%
	GCCGACCCGAGAAGAAGAAA+CGG	+	chr2_1:23057062-23057081	Msa0201500:CDS	55.0%
	GGGGCATATCTCCACGTACT+TGG	+	chr2_1:23057100-23057119	Msa0201500:CDS	55.0%
	ATGGGCCATTACAGTGGGGA+AGG	+	chr2_1:23057369-23057388	Msa0201500:CDS	55.0%
	AGCAGACGCTGATGTGATGC+TGG	+	chr2_1:23057426-23057445	Msa0201500:CDS	55.0%
	CGCTGATGTGATGCTGGACA+AGG	+	chr2_1:23057432-23057451	Msa0201500:CDS	55.0%
!	AGGGCCTTTTGGCATGTGGG+AGG	+	chr2_1:23055639-23055658	Msa0201500:intron	60.0%
	TTGGGCCATGATCACGGCCA+TGG	+	chr2_1:23056812-23056831	Msa0201500:CDS	60.0%
	CATGGCCATGGCCGTGATCA+TGG	-	chr2_1:23056820-23056839	None:intergenic	60.0%
	CATGATCACGGCCATGGCCA+TGG	+	chr2_1:23056818-23056837	Msa0201500:CDS	60.0%
	CGTGGCCGTGATCATGTCCA+TGG	-	chr2_1:23056838-23056857	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_1	gene	23053991	23057747	23053991	ID=Msa0201500;Name=Msa0201500
chr2_1	mRNA	23053991	23057747	23053991	ID=Msa0201500-mRNA-1;Parent=Msa0201500;Name=Msa0201500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=160\|1\|1\|1\|0\|0.5\|2\|231\|408
chr2_1	exon	23053991	23054150	23053991	ID=Msa0201500-mRNA-1:exon:8988;Parent=Msa0201500-mRNA-1
chr2_1	exon	23056290	23057747	23056290	ID=Msa0201500-mRNA-1:exon:8989;Parent=Msa0201500-mRNA-1
chr2_1	five_prime_UTR	23053991	23054150	23053991	ID=Msa0201500-mRNA-1:five_prime_utr;Parent=Msa0201500-mRNA-1
chr2_1	CDS	23056290	23057516	23056290	ID=Msa0201500-mRNA-1:cds;Parent=Msa0201500-mRNA-1
chr2_1	three_prime_UTR	23057517	23057747	23057517	ID=Msa0201500-mRNA-1:three_prime_utr;Parent=Msa0201500-mRNA-1

Gene Sequence

>Msa0201500

ATGGAAGCACAAAGTGGTCACCATGGGCAAATAATTGAAATCAGTGGAGAACTCCCTGATGTAGGAAGGAAAATTTGTGGGGAAGCACCATGTGAGTTCTCAGATGCAGGATCTATTTCGAAGGATTCTGAAGAACGGTCAACTTCTATGCGAAAGCTTCTGATAGCAGTGGCCCTTTGCGTTATTTTCATGTCCGTTGAGGTAGTTGGTGGTATTAAGGCTAACAGTCTTGCAATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCATTTGCCATCTCCTTATTTTCTATATGGGCTGGAGGATGGGAACCGAATCCTCGTCAGTCATTTGGATTTTTCCGAATAGAGATTCTTGGTGCTTTGGTTTCTATGCAATTAATATGGCTGCTTGCTGGGATTCTTGTATATGAAGCCATTGCTAGACTCATTGCAGGTCCTCAAGAAGTGGATGGGTTTTTAATGTTTGTAGTTGCTGCATTTGGTCTTGTGGTGAACATCATTATGGCTTTGGTATTGGGCCATGATCACGGCCATGGCCATGGACATGATCACGGCCACGGACATGATCATCATGGCCACAGCCATGGTATTTCAGTTTCTACCAAGCATACAGATGAGCATCATCACACACATGGCGATCAGACTCACCATCATGATGATGAAAAGCATTCGAAAGATGAACACCACCATACTCATGATGATGCGCACCATCATGACCATGACCACAAAGAGGTTACTGAACCACTTCTTGGTGAATCAAAAGGCCGACCCGAGAAGAAGAAACGGAACATAAATGTACATGGGGCATATCTCCACGTACTTGGAGACTCTATCCAGAGTATTGGTGTAATGATTGGGGGAGCAATCATATGGTATAAACCTGAATGGAAAATAGTCGATTTGATTTGCACTCTAATCTTTTCTGTAATTGTCTTGGCCACAACTATCAACATGCTGAGAAACATTCTGGAAGTCTTGATGGAAAGCACACCACGCGAGATAGATGCTACTCAGATTCAAAAGGGGCTATTGGAGATGGAAGAAGTAGTGGCTGTTCATGAGCTGCACATATGGGCCATTACAGTGGGGAAGGTATTGCTAGCTTGTCATGTTAAAGTCATTCCTGAAGCAGACGCTGATGTGATGCTGGACAAGGTCGTAGACTACATCAGGAGGGTTCATAACATTAGTCATGTAACTATTCAAATAGAACGCTAA

Protein sequence

>Msa0201500

MEAQSGHHGQIIEISGELPDVGRKICGEAPCEFSDAGSISKDSEERSTSMRKLLIAVALCVIFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQLIWLLAGILVYEAIARLIAGPQEVDGFLMFVVAAFGLVVNIIMALVLGHDHGHGHGHDHGHGHDHHGHSHGISVSTKHTDEHHHTHGDQTHHHDDEKHSKDEHHHTHDDAHHHDHDHKEVTEPLLGESKGRPEKKKRNINVHGAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLATTINMLRNILEVLMESTPREIDATQIQKGLLEMEEVVAVHELHIWAITVGKVLLACHVKVIPEADADVMLDKVVDYIRRVHNISHVTIQIER*