Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152760 | XP_013453824.1 | 94.472 | 199 | 6 | 1 | 1 | 194 | 17 | 215 | 4.34e-134 | 388 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152760 | A0A072UPW2 | 94.472 | 199 | 6 | 1 | 1 | 194 | 17 | 215 | 2.08e-134 | 388 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1152760 | Msa1339400 | 0.801124 | 1.044038e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152760 | MtrunA17_Chr5g0419131 | 94.472 | 199 | 6 | 1 | 1 | 194 | 17 | 215 | 4.00e-138 | 388 |
| Msa1152760 | MtrunA17_Chr4g0043161 | 80.711 | 197 | 33 | 1 | 1 | 192 | 61 | 257 | 6.98e-118 | 338 |
| Msa1152760 | MtrunA17_Chr8g0372991 | 37.069 | 116 | 70 | 3 | 8 | 123 | 94 | 206 | 4.38e-16 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152760 | AT1G13820.1 | 69.000 | 200 | 57 | 1 | 1 | 195 | 70 | 269 | 9.89e-105 | 305 |
| Msa1152760 | AT5G39220.1 | 62.000 | 200 | 70 | 2 | 1 | 194 | 68 | 267 | 1.87e-91 | 271 |
| Msa1152760 | AT5G39220.2 | 59.000 | 200 | 68 | 3 | 1 | 194 | 68 | 259 | 7.25e-83 | 249 |
| Msa1152760 | AT4G36530.1 | 34.259 | 108 | 69 | 2 | 8 | 115 | 37 | 142 | 2.70e-14 | 70.9 |
| Msa1152760 | AT4G36530.2 | 34.259 | 108 | 69 | 2 | 8 | 115 | 94 | 199 | 3.96e-14 | 70.5 |
Find 88 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGGGTTTCTCTGATTT+AGG | 0.215057 | 7_4:-38607866 | Msa1152760:intron |
| GGAAATGCCGAAAATAAAAT+TGG | 0.297658 | 7_4:+38609962 | None:intergenic |
| TGGATGGCACATACAGCTTC+TGG | 0.302445 | 7_4:+38607282 | None:intergenic |
| TTGAATATACCTTTCTTATG+AGG | 0.323576 | 7_4:+38606608 | None:intergenic |
| GGTTATCGACATACTTGGTT+GGG | 0.334100 | 7_4:-38607882 | Msa1152760:CDS |
| CATCAGAAGGCCAATGATAT+TGG | 0.348222 | 7_4:-38607355 | Msa1152760:CDS |
| CCAACATAGGCTACCGATCT+AGG | 0.370224 | 7_4:+38607086 | None:intergenic |
| TACATCAAATATGTGCAGTA+TGG | 0.385142 | 7_4:+38606296 | None:intergenic |
| AAAACGCAATCACTTCTATC+AGG | 0.408162 | 7_4:-38607717 | Msa1152760:intron |
| TATCCATTGTTGGAAGAGTC+TGG | 0.412505 | 7_4:-38607917 | Msa1152760:CDS |
| TATTCAGTTCATGTTTAGAA+TGG | 0.414992 | 7_4:-38607949 | Msa1152760:intron |
| CAATTGTCTCTTTAGCTAGC+AGG | 0.425723 | 7_4:-38606391 | Msa1152760:intron |
| CTAGATCGGTAGCCTATGTT+GGG | 0.438798 | 7_4:-38607085 | Msa1152760:CDS |
| GAGACGACCACGAAAGATTC+CGG | 0.443414 | 7_4:+38609710 | None:intergenic |
| AAACCGTGTAGAAGAACAAT+TGG | 0.456619 | 7_4:+38608056 | None:intergenic |
| GAAGTGTTGAGGTTCAAGTA+GGG | 0.458109 | 7_4:+38609766 | None:intergenic |
| AGAAGTGTTGAGGTTCAAGT+AGG | 0.460430 | 7_4:+38609765 | None:intergenic |
| CCTAGATCGGTAGCCTATGT+TGG | 0.461188 | 7_4:-38607086 | Msa1152760:CDS |
| AGTGTATATACAGAGGGAAC+TGG | 0.463727 | 7_4:-38607125 | Msa1152760:CDS |
| AAGAACTTGCCTCACGAAGA+TGG | 0.472116 | 7_4:+38609687 | None:intergenic |
| GGGTTATCGACATACTTGGT+TGG | 0.476497 | 7_4:-38607883 | Msa1152760:CDS |
| TCCTTACGCACCATCCTTGA+CGG | 0.477641 | 7_4:-38606914 | Msa1152760:CDS |
| GCTTGCATTGCTTATTGCCA+TGG | 0.478104 | 7_4:-38606684 | Msa1152760:CDS |
| GAGATACAGATATCCATTGT+TGG | 0.483959 | 7_4:-38607927 | Msa1152760:CDS |
| TGAATATACCTTTCTTATGA+GGG | 0.484063 | 7_4:+38606609 | None:intergenic |
| AATAAGAGGGAAGAAAAGAG+AGG | 0.486927 | 7_4:+38609879 | None:intergenic |
| ACTTGGGTTATCGACATACT+TGG | 0.487875 | 7_4:-38607887 | Msa1152760:CDS |
| CTTGGTCCAACCAATATCAT+TGG | 0.498210 | 7_4:+38607345 | None:intergenic |
| CCGTACGCCGGAATCTTTCG+TGG | 0.499922 | 7_4:-38609717 | Msa1152760:five_prime_UTR |
| TATCATTGGCCTTCTGATGT+AGG | 0.502689 | 7_4:+38607359 | None:intergenic |
| AGCAAGTATGAAGAGGTACT+TGG | 0.503079 | 7_4:-38606327 | Msa1152760:exon |
| GTTAGTGAAGGTCAAATAGT+TGG | 0.503815 | 7_4:+38606940 | None:intergenic |
| GGAATACAACTTATTGGTAG+AGG | 0.504997 | 7_4:-38606353 | Msa1152760:CDS |
| GCATTGCTTATTGCCATGGT+GGG | 0.516840 | 7_4:-38606680 | Msa1152760:CDS |
| AGAACTTGCCTCACGAAGAT+GGG | 0.520489 | 7_4:+38609688 | None:intergenic |
| AATTGTCTCTTTAGCTAGCA+GGG | 0.522621 | 7_4:-38606390 | Msa1152760:intron |
| CTTAGCAACCTTACCTAGAT+CGG | 0.530689 | 7_4:-38607099 | Msa1152760:CDS |
| ATTTCACTGAAATGAAAAGA+AGG | 0.533850 | 7_4:+38609906 | None:intergenic |
| CCCGTCAAGGATGGTGCGTA+AGG | 0.540263 | 7_4:+38606913 | None:intergenic |
| AATTGCACCCCTCATAAGAA+AGG | 0.542107 | 7_4:-38606617 | Msa1152760:intron |
| ATAATTGACAGCAAAGTCAA+TGG | 0.542640 | 7_4:+38607305 | None:intergenic |
| CTTGACACAACTGCTCATGA+TGG | 0.544043 | 7_4:+38608103 | None:intergenic |
| TTCTTCTACACGGTTTCGAT+AGG | 0.544486 | 7_4:-38608049 | Msa1152760:intron |
| TTTGGAAGTCCTACATCAGA+AGG | 0.545172 | 7_4:-38607368 | Msa1152760:CDS |
| GTTATCGACATACTTGGTTG+GGG | 0.547806 | 7_4:-38607881 | Msa1152760:CDS |
| TAGTTGGCATATAAGCGTAA+TGG | 0.554089 | 7_4:+38606956 | None:intergenic |
| GAATACAACTTATTGGTAGA+GGG | 0.554646 | 7_4:-38606352 | Msa1152760:CDS |
| AGAAGGCCAATGATATTGGT+TGG | 0.555544 | 7_4:-38607351 | Msa1152760:CDS |
| CCTCCAATTGTTCTTCTACA+CGG | 0.558051 | 7_4:-38608059 | Msa1152760:CDS |
| CAAGGCACTGGTGCAGAACA+AGG | 0.558230 | 7_4:-38608084 | Msa1152760:CDS |
| GAGCAGTTGTGTCAAGGCAC+TGG | 0.559691 | 7_4:-38608096 | Msa1152760:CDS |
| TTGACACAACTGCTCATGAT+GGG | 0.564698 | 7_4:+38608104 | None:intergenic |
| CCGTGTAGAAGAACAATTGG+AGG | 0.565041 | 7_4:+38608059 | None:intergenic |
| CGAAAGATTCCGGCGTACGG+TGG | 0.567144 | 7_4:+38609720 | None:intergenic |
| CACATTAGTCCCGTCAAGGA+TGG | 0.568377 | 7_4:+38606904 | None:intergenic |
| GCAACAGCAGAACCGAGGCT+TGG | 0.569874 | 7_4:+38607327 | None:intergenic |
| AGAGAGAGATAGACAGAGAG+AGG | 0.573494 | 7_4:+38609808 | None:intergenic |
| CCACGAAAGATTCCGGCGTA+CGG | 0.578134 | 7_4:+38609717 | None:intergenic |
| CTACAATTACATAATCTGAC+AGG | 0.579589 | 7_4:+38606220 | None:intergenic |
| ATATTGGTTGGACCAAGCCT+CGG | 0.580618 | 7_4:-38607339 | Msa1152760:CDS |
| TGCATTGCTTATTGCCATGG+TGG | 0.580841 | 7_4:-38606681 | Msa1152760:CDS |
| GAAAGATTCCGGCGTACGGT+GGG | 0.583727 | 7_4:+38609721 | None:intergenic |
| AAACCAGACTCTTCCAACAA+TGG | 0.584131 | 7_4:+38607914 | None:intergenic |
| TTCTGTCTCCCACCGTACGC+CGG | 0.585554 | 7_4:-38609729 | Msa1152760:five_prime_UTR |
| CCTTACGCACCATCCTTGAC+GGG | 0.586415 | 7_4:-38606913 | Msa1152760:CDS |
| CATCATGAGCAGTTGTGTCA+AGG | 0.588221 | 7_4:-38608102 | Msa1152760:exon |
| ATAAGAGGGAAGAAAAGAGA+GGG | 0.589813 | 7_4:+38609880 | None:intergenic |
| ATAGGCTACCGATCTAGGTA+AGG | 0.590029 | 7_4:+38607091 | None:intergenic |
| GAATATACCTTTCTTATGAG+GGG | 0.592750 | 7_4:+38606610 | None:intergenic |
| CTGAAATGAAAAGAAGGAGA+GGG | 0.598566 | 7_4:+38609912 | None:intergenic |
| GGAGATATTTACCCCAACAT+AGG | 0.603722 | 7_4:+38607073 | None:intergenic |
| AACTCACATTAGTCCCGTCA+AGG | 0.617765 | 7_4:+38606900 | None:intergenic |
| GACGCTAGTGTATATACAGA+GGG | 0.618405 | 7_4:-38607131 | Msa1152760:CDS |
| GCGTAAGGACATGTTAGTGA+AGG | 0.631032 | 7_4:+38606928 | None:intergenic |
| GAGGGGAAGCAAGTATGAAG+AGG | 0.631298 | 7_4:-38606334 | Msa1152760:exon |
| AAAATAAAATTGGAGAATAG+CGG | 0.640516 | 7_4:+38609972 | None:intergenic |
| AATACAACTTATTGGTAGAG+GGG | 0.641649 | 7_4:-38606351 | Msa1152760:CDS |
| ATGACGAGAGAGAAGTGTTG+AGG | 0.646451 | 7_4:+38609755 | None:intergenic |
| ACTGAAATGAAAAGAAGGAG+AGG | 0.649412 | 7_4:+38609911 | None:intergenic |
| ATAAAATTGGAGAATAGCGG+CGG | 0.664168 | 7_4:+38609975 | None:intergenic |
| GGTCGTCTCCCATCTTCGTG+AGG | 0.670187 | 7_4:-38609696 | Msa1152760:intron |
| AAATCTTCCTCCTTGTGACG+TGG | 0.670338 | 7_4:-38607744 | Msa1152760:CDS |
| TGACGCTAGTGTATATACAG+AGG | 0.685376 | 7_4:-38607132 | Msa1152760:CDS |
| TAGATCGGTAGCCTATGTTG+GGG | 0.690553 | 7_4:-38607084 | Msa1152760:intron |
| CAATGGCAACAGCAGAACCG+AGG | 0.691199 | 7_4:+38607322 | None:intergenic |
| ATGGCAATAAGCAATGCAAG+CGG | 0.692723 | 7_4:+38606686 | None:intergenic |
| TTTGATACCACGTCACAAGG+AGG | 0.713535 | 7_4:+38607737 | None:intergenic |
| ACAGTAGCATCATCCCACCA+TGG | 0.730059 | 7_4:+38606667 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTGTAAATTTTTTAGAA+TGG | - | chr7_4:38607038-38607057 | Msa1152760:intron | 10.0% |
| !!! | AGTTTTTTTTTTTATCGATA+TGG | + | chr7_4:38606364-38606383 | None:intergenic | 15.0% |
| !!! | AAAAAAATTAGGGTTTTTAT+GGG | + | chr7_4:38606650-38606669 | None:intergenic | 15.0% |
| !!! | AAAAAAAATTAGGGTTTTTA+TGG | + | chr7_4:38606651-38606670 | None:intergenic | 15.0% |
| !! | NNNNNNNNGTGTGATATATT+TGG | - | chr7_4:38606982-38607001 | Msa1152760:intron | 15.0% |
| !!! | ATTAACATGATATTTGTTTT+TGG | - | chr7_4:38607223-38607242 | Msa1152760:intron | 15.0% |
| !!! | TTAACATGATATTTGTTTTT+GGG | - | chr7_4:38607224-38607243 | Msa1152760:intron | 15.0% |
| !!! | TAACAAAATTACTATTTCTT+TGG | - | chr7_4:38607869-38607888 | Msa1152760:CDS | 15.0% |
| !! | AATAAGACAATATAAAATTC+AGG | + | chr7_4:38608224-38608243 | None:intergenic | 15.0% |
| !! | AAAATGTTGAAACATATATT+GGG | + | chr7_4:38609462-38609481 | None:intergenic | 15.0% |
| !! | AAAAATGTTGAAACATATAT+TGG | + | chr7_4:38609463-38609482 | None:intergenic | 15.0% |
| !!! | TATGTTAATTTTATGGATTT+TGG | - | chr7_4:38609612-38609631 | Msa1152760:intron | 15.0% |
| !! | AAAATAAAATTGGAGAATAG+CGG | + | chr7_4:38606223-38606242 | None:intergenic | 20.0% |
| !!! | CTATTCTCCAATTTTATTTT+CGG | - | chr7_4:38606223-38606242 | Msa1152760:three_prime_UTR | 20.0% |
| !!! | AAAATTTGTTTTTTCAGAGA+GGG | + | chr7_4:38606254-38606273 | None:intergenic | 20.0% |
| !!! | AAAAATTTGTTTTTTCAGAG+AGG | + | chr7_4:38606255-38606274 | None:intergenic | 20.0% |
| !!! | AAATTTACAAATTTTACTCC+TGG | + | chr7_4:38607031-38607050 | None:intergenic | 20.0% |
| !! | ATTCATACTTTCTTTAACAT+TGG | - | chr7_4:38607101-38607120 | Msa1152760:CDS | 20.0% |
| !! | ATTAAGAGACCAATATAAAT+TGG | + | chr7_4:38607146-38607165 | None:intergenic | 20.0% |
| !!! | TAACATGATATTTGTTTTTG+GGG | - | chr7_4:38607225-38607244 | Msa1152760:intron | 20.0% |
| !!! | GAACTATAAAATTTTGTTGT+TGG | - | chr7_4:38607824-38607843 | Msa1152760:intron | 20.0% |
| !!! | TATAAAATTTTGTTGTTGGT+TGG | - | chr7_4:38607828-38607847 | Msa1152760:intron | 20.0% |
| !!! | TTACTATTTCTTTGGATTAA+TGG | - | chr7_4:38607877-38607896 | Msa1152760:CDS | 20.0% |
| !!! | ATTGCTATTCGAAATAAAAT+TGG | + | chr7_4:38607944-38607963 | None:intergenic | 20.0% |
| !! | CTTAATTCAAGATAATTGAA+TGG | - | chr7_4:38608608-38608627 | Msa1152760:intron | 20.0% |
| !! | TATCGAATCAGTTAAATTAT+TGG | - | chr7_4:38608670-38608689 | Msa1152760:intron | 20.0% |
| !! | TAAACTATCATCTGAATAAT+TGG | - | chr7_4:38608707-38608726 | Msa1152760:intron | 20.0% |
| !!! | GTATTTTTCTATAACAGTTT+TGG | - | chr7_4:38608806-38608825 | Msa1152760:intron | 20.0% |
| !! | ATATTAAGACGTGAAATTAT+TGG | + | chr7_4:38608933-38608952 | None:intergenic | 20.0% |
| !!! | TCACATTTTTATCTTCATAT+TGG | - | chr7_4:38609343-38609362 | Msa1152760:intron | 20.0% |
| !!! | CACATTTTTATCTTCATATT+GGG | - | chr7_4:38609344-38609363 | Msa1152760:intron | 20.0% |
| !!! | TTTTCATATATCCTCTTTAT+AGG | - | chr7_4:38609479-38609498 | Msa1152760:intron | 20.0% |
| ! | ATTTCACTGAAATGAAAAGA+AGG | + | chr7_4:38606289-38606308 | None:intergenic | 25.0% |
| ! | GAGAAAAAGAAAGAATAAGA+GGG | + | chr7_4:38606329-38606348 | None:intergenic | 25.0% |
| ! | AGAGAAAAAGAAAGAATAAG+AGG | + | chr7_4:38606330-38606349 | None:intergenic | 25.0% |
| !!! | TTTTTTATCGATATGGAGAA+TGG | + | chr7_4:38606357-38606376 | None:intergenic | 25.0% |
| !!! | AATTTTTTGTGTGTGTATCA+AGG | - | chr7_4:38606746-38606765 | Msa1152760:intron | 25.0% |
| !!! | TGATATATTTGGCTTTTAAC+TGG | - | chr7_4:38606993-38607012 | Msa1152760:intron | 25.0% |
| ! | TCTTAATATTGTAACCATGA+GGG | - | chr7_4:38607159-38607178 | Msa1152760:intron | 25.0% |
| !!! | GAATGTTTGATTTGTGTTTA+TGG | - | chr7_4:38607974-38607993 | Msa1152760:intron | 25.0% |
| ! | TTGTTTCGTATGATATGATT+AGG | - | chr7_4:38608048-38608067 | Msa1152760:intron | 25.0% |
| ! | TATTCAGTTCATGTTTAGAA+TGG | - | chr7_4:38608243-38608262 | Msa1152760:intron | 25.0% |
| !! | TATTTGCAATTCATCTTTTC+AGG | - | chr7_4:38609018-38609037 | Msa1152760:intron | 25.0% |
| !!! | CTTAATGTTTTAGTAAGATG+CGG | + | chr7_4:38609143-38609162 | None:intergenic | 25.0% |
| ! | TGAATATACCTTTCTTATGA+GGG | + | chr7_4:38609586-38609605 | None:intergenic | 25.0% |
| ! | TTGAATATACCTTTCTTATG+AGG | + | chr7_4:38609587-38609606 | None:intergenic | 25.0% |
| ! | AATACATCTTGTTGCAAAAT+TGG | + | chr7_4:38609745-38609764 | None:intergenic | 25.0% |
| !!! | TTTTGAGGAATACAACTTAT+TGG | - | chr7_4:38609833-38609852 | Msa1152760:five_prime_UTR | 25.0% |
| GGAAATGCCGAAAATAAAAT+TGG | + | chr7_4:38606233-38606252 | None:intergenic | 30.0% | |
| CTTACAGTTTCTACAAACAT+TGG | + | chr7_4:38606542-38606561 | None:intergenic | 30.0% | |
| CAATGTTTGTAGAAACTGTA+AGG | - | chr7_4:38606540-38606559 | Msa1152760:intron | 30.0% | |
| CGAGAAGGGAAAAAAAATTA+GGG | + | chr7_4:38606660-38606679 | None:intergenic | 30.0% | |
| ACGAGAAGGGAAAAAAAATT+AGG | + | chr7_4:38606661-38606680 | None:intergenic | 30.0% | |
| TACCCAACCAAAGAAAAATT+GGG | + | chr7_4:38606685-38606704 | None:intergenic | 30.0% | |
| ATACCCAACCAAAGAAAAAT+TGG | + | chr7_4:38606686-38606705 | None:intergenic | 30.0% | |
| ! | TATTAATTTTGCGTGTGTCA+AGG | - | chr7_4:38606703-38606722 | Msa1152760:intron | 30.0% |
| ATGCCAGTTCCAATTTATAT+TGG | - | chr7_4:38607134-38607153 | Msa1152760:CDS | 30.0% | |
| AGACCAATATAAATTGGAAC+TGG | + | chr7_4:38607140-38607159 | None:intergenic | 30.0% | |
| CTCTTAATATTGTAACCATG+AGG | - | chr7_4:38607158-38607177 | Msa1152760:intron | 30.0% | |
| CTTAATATTGTAACCATGAG+GGG | - | chr7_4:38607160-38607179 | Msa1152760:intron | 30.0% | |
| !! | AACAAATCAAAGTGTTGTCA+TGG | - | chr7_4:38607263-38607282 | Msa1152760:intron | 30.0% |
| !!! | GGTTGATTCGGTTTTATTTT+TGG | - | chr7_4:38607365-38607384 | Msa1152760:CDS | 30.0% |
| !!! | TGATTCGGTTTTATTTTTGG+TGG | - | chr7_4:38607368-38607387 | Msa1152760:CDS | 30.0% |
| !! | TTGATAGTAGCTTGTTTAGT+GGG | - | chr7_4:38607582-38607601 | Msa1152760:intron | 30.0% |
| !!! | TTTTTTAGTGAGTTGGTTCT+TGG | - | chr7_4:38607722-38607741 | Msa1152760:CDS | 30.0% |
| ! | AAAAAGAGTACAAATGGAGA+GGG | + | chr7_4:38607773-38607792 | None:intergenic | 30.0% |
| ! | AAAAAAGAGTACAAATGGAG+AGG | + | chr7_4:38607774-38607793 | None:intergenic | 30.0% |
| !!! | AAAATTTTGTTGTTGGTTGG+TGG | - | chr7_4:38607831-38607850 | Msa1152760:intron | 30.0% |
| AATTTCTGTTGCTCGAAAAA+CGG | - | chr7_4:38607910-38607929 | Msa1152760:CDS | 30.0% | |
| AACAGCAAAAATTAGTTGTG+AGG | + | chr7_4:38608014-38608033 | None:intergenic | 30.0% | |
| AAAAAAGCCTTACAGAGAAA+GGG | + | chr7_4:38608392-38608411 | None:intergenic | 30.0% | |
| AAAAAAAGCCTTACAGAGAA+AGG | + | chr7_4:38608393-38608412 | None:intergenic | 30.0% | |
| TTATAGGTTTGATCAACACT+CGG | + | chr7_4:38608542-38608561 | None:intergenic | 30.0% | |
| TGTTGAAAGAAATTGACCAT+CGG | + | chr7_4:38608742-38608761 | None:intergenic | 30.0% | |
| ATAATTGACAGCAAAGTCAA+TGG | + | chr7_4:38608890-38608909 | None:intergenic | 30.0% | |
| TAAGACGTGAAATTATTGGA+TGG | + | chr7_4:38608929-38608948 | None:intergenic | 30.0% | |
| AATTCAATGCTTACACTGTT+TGG | - | chr7_4:38609186-38609205 | Msa1152760:intron | 30.0% | |
| !! | CTAGTAGTCATTTTAAGGAT+AGG | + | chr7_4:38609320-38609339 | None:intergenic | 30.0% |
| CTATCCTTAAAATGACTACT+AGG | - | chr7_4:38609318-38609337 | Msa1152760:intron | 30.0% | |
| TATCTTCATATTGGGACATT+AGG | - | chr7_4:38609352-38609371 | Msa1152760:intron | 30.0% | |
| ! | TATTGGGTTGTTAAAACTCT+CGG | + | chr7_4:38609446-38609465 | None:intergenic | 30.0% |
| TCATATATCCTCTTTATAGG+TGG | - | chr7_4:38609482-38609501 | Msa1152760:intron | 30.0% | |
| CATATATCCTCTTTATAGGT+GGG | - | chr7_4:38609483-38609502 | Msa1152760:intron | 30.0% | |
| !!! | ACTGTTGATTTTATGACTAG+TGG | - | chr7_4:38609543-38609562 | Msa1152760:intron | 30.0% |
| GAATATACCTTTCTTATGAG+GGG | + | chr7_4:38609585-38609604 | None:intergenic | 30.0% | |
| ATGTATTCATTTGTCTCGAA+GGG | + | chr7_4:38609646-38609665 | None:intergenic | 30.0% | |
| AATGTATTCATTTGTCTCGA+AGG | + | chr7_4:38609647-38609666 | None:intergenic | 30.0% | |
| !! | ATGTATTAACTTGCTTTGAC+TGG | - | chr7_4:38609758-38609777 | Msa1152760:five_prime_UTR | 30.0% |
| GAATACAACTTATTGGTAGA+GGG | - | chr7_4:38609840-38609859 | Msa1152760:intron | 30.0% | |
| AATACAACTTATTGGTAGAG+GGG | - | chr7_4:38609841-38609860 | Msa1152760:intron | 30.0% | |
| TACATCAAATATGTGCAGTA+TGG | + | chr7_4:38609899-38609918 | None:intergenic | 30.0% | |
| CTACAATTACATAATCTGAC+AGG | + | chr7_4:38609975-38609994 | None:intergenic | 30.0% | |
| CTGAAATGAAAAGAAGGAGA+GGG | + | chr7_4:38606283-38606302 | None:intergenic | 35.0% | |
| ACTGAAATGAAAAGAAGGAG+AGG | + | chr7_4:38606284-38606303 | None:intergenic | 35.0% | |
| ATAAGAGGGAAGAAAAGAGA+GGG | + | chr7_4:38606315-38606334 | None:intergenic | 35.0% | |
| AATAAGAGGGAAGAAAAGAG+AGG | + | chr7_4:38606316-38606335 | None:intergenic | 35.0% | |
| ! | TCCCCAATTTTTCTTTGGTT+GGG | - | chr7_4:38606680-38606699 | Msa1152760:CDS | 35.0% |
| ACCCAACCAAAGAAAAATTG+GGG | + | chr7_4:38606684-38606703 | None:intergenic | 35.0% | |
| !! | AACTGGTTTGTTAAGATTCC+AGG | - | chr7_4:38607010-38607029 | Msa1152760:intron | 35.0% |
| TAGATATAATAAGCCCCTCA+TGG | + | chr7_4:38607176-38607195 | None:intergenic | 35.0% | |
| !!! | CATGATATTTGTTTTTGGGG+TGG | - | chr7_4:38607228-38607247 | Msa1152760:intron | 35.0% |
| CAACGTGTTTATTCTACGAA+TGG | - | chr7_4:38607314-38607333 | Msa1152760:CDS | 35.0% | |
| !!! | TGGTGTTTTGTGTGTTGTTT+GGG | - | chr7_4:38607388-38607407 | Msa1152760:intron | 35.0% |
| !! | GTTGATAGTAGCTTGTTTAG+TGG | - | chr7_4:38607581-38607600 | Msa1152760:intron | 35.0% |
| !! | GTGTTATTTAGTTCTGCTTC+AGG | - | chr7_4:38607682-38607701 | Msa1152760:intron | 35.0% |
| !!! | TGCTTCAGGCTTTGTTTTTA+GGG | - | chr7_4:38607696-38607715 | Msa1152760:intron | 35.0% |
| ! | GGAGGAAAAAAGAGTACAAA+TGG | + | chr7_4:38607779-38607798 | None:intergenic | 35.0% |
| AAGATGTACTTAACCTGCAT+AGG | + | chr7_4:38607800-38607819 | None:intergenic | 35.0% | |
| AAACCGTGTAGAAGAACAAT+TGG | + | chr7_4:38608139-38608158 | None:intergenic | 35.0% | |
| GAGATACAGATATCCATTGT+TGG | - | chr7_4:38608265-38608284 | Msa1152760:intron | 35.0% | |
| AAAAAGCCTTACAGAGAAAG+GGG | + | chr7_4:38608391-38608410 | None:intergenic | 35.0% | |
| AAAACGCAATCACTTCTATC+AGG | - | chr7_4:38608475-38608494 | Msa1152760:intron | 35.0% | |
| TATAGGTTTGATCAACACTC+GGG | + | chr7_4:38608541-38608560 | None:intergenic | 35.0% | |
| TGTCTGTGTCAGTACTTTAT+AGG | + | chr7_4:38608558-38608577 | None:intergenic | 35.0% | |
| TTGAATGTAACCACATGTGT+CGG | - | chr7_4:38608637-38608656 | Msa1152760:intron | 35.0% | |
| !! | TTGCAATTCATCTTTTCAGG+TGG | - | chr7_4:38609021-38609040 | Msa1152760:intron | 35.0% |
| TAGTTGGCATATAAGCGTAA+TGG | + | chr7_4:38609239-38609258 | None:intergenic | 35.0% | |
| GTTAGTGAAGGTCAAATAGT+TGG | + | chr7_4:38609255-38609274 | None:intergenic | 35.0% | |
| !! | GATGCCTAGTAGTCATTTTA+AGG | + | chr7_4:38609325-38609344 | None:intergenic | 35.0% |
| ! | ACATGTTCCCTTTGATAACT+TGG | - | chr7_4:38609376-38609395 | Msa1152760:intron | 35.0% |
| TGTGATGCCAAGTTATCAAA+GGG | + | chr7_4:38609386-38609405 | None:intergenic | 35.0% | |
| ATGTGATGCCAAGTTATCAA+AGG | + | chr7_4:38609387-38609406 | None:intergenic | 35.0% | |
| ATGATCAAGAACTTTGTGCT+TGG | - | chr7_4:38609405-38609424 | Msa1152760:intron | 35.0% | |
| !! | GTTGATTTTATGACTAGTGG+CGG | - | chr7_4:38609546-38609565 | Msa1152760:intron | 35.0% |
| TGTATTCATTTGTCTCGAAG+GGG | + | chr7_4:38609645-38609664 | None:intergenic | 35.0% | |
| AATTGTCTCTTTAGCTAGCA+GGG | - | chr7_4:38609802-38609821 | Msa1152760:five_prime_UTR | 35.0% | |
| GGAATACAACTTATTGGTAG+AGG | - | chr7_4:38609839-38609858 | Msa1152760:five_prime_UTR | 35.0% | |
| !! | GAAGTGTTGAGGTTCAAGTA+GGG | + | chr7_4:38606429-38606448 | None:intergenic | 40.0% |
| !! | AGAAGTGTTGAGGTTCAAGT+AGG | + | chr7_4:38606430-38606449 | None:intergenic | 40.0% |
| CTACAAACATTGGAGACAGA+GGG | + | chr7_4:38606532-38606551 | None:intergenic | 40.0% | |
| TCTACAAACATTGGAGACAG+AGG | + | chr7_4:38606533-38606552 | None:intergenic | 40.0% | |
| AGAAAAATTGGGGACGAGAA+GGG | + | chr7_4:38606674-38606693 | None:intergenic | 40.0% | |
| AAGAAAAATTGGGGACGAGA+AGG | + | chr7_4:38606675-38606694 | None:intergenic | 40.0% | |
| ! | TCTCGTCCCCAATTTTTCTT+TGG | - | chr7_4:38606675-38606694 | Msa1152760:CDS | 40.0% |
| ! | GTCCCCAATTTTTCTTTGGT+TGG | - | chr7_4:38606679-38606698 | Msa1152760:CDS | 40.0% |
| !! | TCAAAGTGTTGTCATGGCAA+TGG | - | chr7_4:38607269-38607288 | Msa1152760:intron | 40.0% |
| !! | GTGGTGTTTTGTGTGTTGTT+TGG | - | chr7_4:38607387-38607406 | Msa1152760:intron | 40.0% |
| !!! | GGTGTTTTGTGTGTTGTTTG+GGG | - | chr7_4:38607389-38607408 | Msa1152760:intron | 40.0% |
| !!! | GTGTTTTGTGTGTTGTTTGG+GGG | - | chr7_4:38607390-38607409 | Msa1152760:intron | 40.0% |
| ACAACAACAAAACTACTGCC+TGG | + | chr7_4:38607508-38607527 | None:intergenic | 40.0% | |
| ! | TTGTTTAGTGGGTCTGTTTG+CGG | - | chr7_4:38607593-38607612 | Msa1152760:intron | 40.0% |
| !!! | CTGCTTCAGGCTTTGTTTTT+AGG | - | chr7_4:38607695-38607714 | Msa1152760:intron | 40.0% |
| !!! | GCTTCAGGCTTTGTTTTTAG+GGG | - | chr7_4:38607697-38607716 | Msa1152760:intron | 40.0% |
| !!! | CTTCAGGCTTTGTTTTTAGG+GGG | - | chr7_4:38607698-38607717 | Msa1152760:intron | 40.0% |
| !!! | TTCAGGCTTTGTTTTTAGGG+GGG | - | chr7_4:38607699-38607718 | Msa1152760:intron | 40.0% |
| !! | TTTAGTGAGTTGGTTCTTGG+TGG | - | chr7_4:38607725-38607744 | Msa1152760:CDS | 40.0% |
| !!! | ACTCTTTTTTCCTCCTATGC+AGG | - | chr7_4:38607784-38607803 | Msa1152760:intron | 40.0% |
| ATGTACTTAACCTGCATAGG+AGG | + | chr7_4:38607797-38607816 | None:intergenic | 40.0% | |
| GCAGGTTAAGTACATCTTGT+TGG | - | chr7_4:38607802-38607821 | Msa1152760:intron | 40.0% | |
| TTGACACAACTGCTCATGAT+GGG | + | chr7_4:38608091-38608110 | None:intergenic | 40.0% | |
| CCTCCAATTGTTCTTCTACA+CGG | - | chr7_4:38608133-38608152 | Msa1152760:intron | 40.0% | |
| TTCTTCTACACGGTTTCGAT+AGG | - | chr7_4:38608143-38608162 | Msa1152760:intron | 40.0% | |
| TATCCATTGTTGGAAGAGTC+TGG | - | chr7_4:38608275-38608294 | Msa1152760:intron | 40.0% | |
| AAACCAGACTCTTCCAACAA+TGG | + | chr7_4:38608281-38608300 | None:intergenic | 40.0% | |
| !!! | AAGAGTCTGGTTTTGAGACT+TGG | - | chr7_4:38608288-38608307 | Msa1152760:intron | 40.0% |
| !!! | AGAGTCTGGTTTTGAGACTT+GGG | - | chr7_4:38608289-38608308 | Msa1152760:intron | 40.0% |
| ACTTGGGTTATCGACATACT+TGG | - | chr7_4:38608305-38608324 | Msa1152760:intron | 40.0% | |
| GGTTATCGACATACTTGGTT+GGG | - | chr7_4:38608310-38608329 | Msa1152760:intron | 40.0% | |
| GTTATCGACATACTTGGTTG+GGG | - | chr7_4:38608311-38608330 | Msa1152760:intron | 40.0% | |
| ! | CTTTTACCCCTTTCTCTGTA+AGG | - | chr7_4:38608382-38608401 | Msa1152760:intron | 40.0% |
| ! | CAAGGAGGAAGATTTTCTGA+TGG | + | chr7_4:38608443-38608462 | None:intergenic | 40.0% |
| ATAGGTTTGATCAACACTCG+GGG | + | chr7_4:38608540-38608559 | None:intergenic | 40.0% | |
| TGTCATTGTCACTGTTGTGT+CGG | + | chr7_4:38608588-38608607 | None:intergenic | 40.0% | |
| TGCATTGTTTCACTGTGTTG+AGG | - | chr7_4:38608776-38608795 | Msa1152760:intron | 40.0% | |
| GCATTGTTTCACTGTGTTGA+GGG | - | chr7_4:38608777-38608796 | Msa1152760:intron | 40.0% | |
| TTTGGAAGTCCTACATCAGA+AGG | - | chr7_4:38608824-38608843 | Msa1152760:intron | 40.0% | |
| !! | TATCATTGGCCTTCTGATGT+AGG | + | chr7_4:38608836-38608855 | None:intergenic | 40.0% |
| CATCAGAAGGCCAATGATAT+TGG | - | chr7_4:38608837-38608856 | Msa1152760:intron | 40.0% | |
| AGAAGGCCAATGATATTGGT+TGG | - | chr7_4:38608841-38608860 | Msa1152760:intron | 40.0% | |
| CTTGGTCCAACCAATATCAT+TGG | + | chr7_4:38608850-38608869 | None:intergenic | 40.0% | |
| TCACGTCTTAATATCCACCA+CGG | - | chr7_4:38608939-38608958 | Msa1152760:intron | 40.0% | |
| TGACGCTAGTGTATATACAG+AGG | - | chr7_4:38609060-38609079 | Msa1152760:intron | 40.0% | |
| GACGCTAGTGTATATACAGA+GGG | - | chr7_4:38609061-38609080 | Msa1152760:intron | 40.0% | |
| AGTGTATATACAGAGGGAAC+TGG | - | chr7_4:38609067-38609086 | Msa1152760:intron | 40.0% | |
| CTTAGCAACCTTACCTAGAT+CGG | - | chr7_4:38609093-38609112 | Msa1152760:intron | 40.0% | |
| GGAGATATTTACCCCAACAT+AGG | + | chr7_4:38609122-38609141 | None:intergenic | 40.0% | |
| TCAAGAACTTTGTGCTTGGT+TGG | - | chr7_4:38609409-38609428 | Msa1152760:intron | 40.0% | |
| !! | CTTTGTGCTTGGTTGGTAAT+AGG | - | chr7_4:38609416-38609435 | Msa1152760:intron | 40.0% |
| ATGGCAATAAGCAATGCAAG+CGG | + | chr7_4:38609509-38609528 | None:intergenic | 40.0% | |
| AATTGCACCCCTCATAAGAA+AGG | - | chr7_4:38609575-38609594 | Msa1152760:intron | 40.0% | |
| CAATTGTCTCTTTAGCTAGC+AGG | - | chr7_4:38609801-38609820 | Msa1152760:five_prime_UTR | 40.0% | |
| ! | AGCAGGGAACTATTCTTTTG+AGG | - | chr7_4:38609818-38609837 | Msa1152760:five_prime_UTR | 40.0% |
| !! | AGCAAGTATGAAGAGGTACT+TGG | - | chr7_4:38609865-38609884 | Msa1152760:intron | 40.0% |
| AGAGAGAGATAGACAGAGAG+AGG | + | chr7_4:38606387-38606406 | None:intergenic | 45.0% | |
| !! | ATGACGAGAGAGAAGTGTTG+AGG | + | chr7_4:38606440-38606459 | None:intergenic | 45.0% |
| AGAACTTGCCTCACGAAGAT+GGG | + | chr7_4:38606507-38606526 | None:intergenic | 45.0% | |
| AAGAACTTGCCTCACGAAGA+TGG | + | chr7_4:38606508-38606527 | None:intergenic | 45.0% | |
| !! | GCGTTTTTCAGCAACGATGA+GGG | + | chr7_4:38606576-38606595 | None:intergenic | 45.0% |
| !! | TGCGTTTTTCAGCAACGATG+AGG | + | chr7_4:38606577-38606596 | None:intergenic | 45.0% |
| TCATCGTTGCTGAAAAACGC+AGG | - | chr7_4:38606576-38606595 | Msa1152760:intron | 45.0% | |
| !!! | TGTTTTTGGGGTGGATGAGT+TGG | - | chr7_4:38607237-38607256 | Msa1152760:intron | 45.0% |
| !! | TCGAATCCTCGCTTTTGTCT+TGG | - | chr7_4:38607340-38607359 | Msa1152760:CDS | 45.0% |
| !! | CGAATCCTCGCTTTTGTCTT+GGG | - | chr7_4:38607341-38607360 | Msa1152760:CDS | 45.0% |
| !! | GAATCCTCGCTTTTGTCTTG+GGG | - | chr7_4:38607342-38607361 | Msa1152760:CDS | 45.0% |
| !! | AATCCTCGCTTTTGTCTTGG+GGG | - | chr7_4:38607343-38607362 | Msa1152760:CDS | 45.0% |
| ! | TTTGTCTTGGGGGGTTGATT+CGG | - | chr7_4:38607353-38607372 | Msa1152760:CDS | 45.0% |
| !!! | TTTTGTGTGTTGTTTGGGGG+TGG | - | chr7_4:38607393-38607412 | Msa1152760:intron | 45.0% |
| AGTGGAGTTTGTGCTGTCAT+AGG | - | chr7_4:38607450-38607469 | Msa1152760:intron | 45.0% | |
| GTTTGTGCTGTCATAGGTTC+TGG | - | chr7_4:38607456-38607475 | Msa1152760:intron | 45.0% | |
| ! | TGTCATAGGTTCTGGCTGTT+CGG | - | chr7_4:38607464-38607483 | Msa1152760:intron | 45.0% |
| AGTGTCTGTGTTCCTTGTGT+GGG | - | chr7_4:38607541-38607560 | Msa1152760:intron | 45.0% | |
| !!! | AGGGGGGTTTTTTAGTGAGT+TGG | - | chr7_4:38607715-38607734 | Msa1152760:intron | 45.0% |
| CTTGACACAACTGCTCATGA+TGG | + | chr7_4:38608092-38608111 | None:intergenic | 45.0% | |
| CATCATGAGCAGTTGTGTCA+AGG | - | chr7_4:38608090-38608109 | Msa1152760:CDS | 45.0% | |
| CCGTGTAGAAGAACAATTGG+AGG | + | chr7_4:38608136-38608155 | None:intergenic | 45.0% | |
| GGGTTATCGACATACTTGGT+TGG | - | chr7_4:38608309-38608328 | Msa1152760:intron | 45.0% | |
| GGTTGGGGTTTCTCTGATTT+AGG | - | chr7_4:38608326-38608345 | Msa1152760:intron | 45.0% | |
| AAATCTTCCTCCTTGTGACG+TGG | - | chr7_4:38608448-38608467 | Msa1152760:intron | 45.0% | |
| TTTGATACCACGTCACAAGG+AGG | + | chr7_4:38608458-38608477 | None:intergenic | 45.0% | |
| !! | CGTTTTGATACCACGTCACA+AGG | + | chr7_4:38608461-38608480 | None:intergenic | 45.0% |
| GTCATTGTCACTGTTGTGTC+GGG | + | chr7_4:38608587-38608606 | None:intergenic | 45.0% | |
| TAATTGGCTGTCTTCACCGA+TGG | - | chr7_4:38608723-38608742 | Msa1152760:intron | 45.0% | |
| ! | ATATTGGTTGGACCAAGCCT+CGG | - | chr7_4:38608853-38608872 | Msa1152760:intron | 45.0% |
| TCTTTCCAAAAACTGTGCCG+TGG | + | chr7_4:38608959-38608978 | None:intergenic | 45.0% | |
| ATAGGCTACCGATCTAGGTA+AGG | + | chr7_4:38609104-38609123 | None:intergenic | 45.0% | |
| CTAGATCGGTAGCCTATGTT+GGG | - | chr7_4:38609107-38609126 | Msa1152760:intron | 45.0% | |
| TAGATCGGTAGCCTATGTTG+GGG | - | chr7_4:38609108-38609127 | Msa1152760:intron | 45.0% | |
| TGCTTACACTGTTTGGCATC+AGG | - | chr7_4:38609193-38609212 | Msa1152760:intron | 45.0% | |
| GCGTAAGGACATGTTAGTGA+AGG | + | chr7_4:38609267-38609286 | None:intergenic | 45.0% | |
| AACTCACATTAGTCCCGTCA+AGG | + | chr7_4:38609295-38609314 | None:intergenic | 45.0% | |
| GCTTGCATTGCTTATTGCCA+TGG | - | chr7_4:38609508-38609527 | Msa1152760:intron | 45.0% | |
| TGCATTGCTTATTGCCATGG+TGG | - | chr7_4:38609511-38609530 | Msa1152760:intron | 45.0% | |
| GCATTGCTTATTGCCATGGT+GGG | - | chr7_4:38609512-38609531 | Msa1152760:intron | 45.0% | |
| TGCATCAGACCTTCTTACCA+TGG | - | chr7_4:38609681-38609700 | Msa1152760:intron | 45.0% | |
| GCATCAGACCTTCTTACCAT+GGG | - | chr7_4:38609682-38609701 | Msa1152760:intron | 45.0% | |
| CATCAGACCTTCTTACCATG+GGG | - | chr7_4:38609683-38609702 | Msa1152760:intron | 45.0% | |
| CATCATACCCCATGGTAAGA+AGG | + | chr7_4:38609693-38609712 | None:intergenic | 45.0% | |
| ACTACTGTCATCATACCCCA+TGG | + | chr7_4:38609701-38609720 | None:intergenic | 45.0% | |
| TGACAGTAGTCACTTGCTTG+TGG | - | chr7_4:38609711-38609730 | Msa1152760:five_prime_UTR | 45.0% | |
| !!! | AATATTTTATGTTAATTTTA+TGG | - | chr7_4:38609605-38609624 | Msa1152760:intron | 5.0% |
| GAGACGACCACGAAAGATTC+CGG | + | chr7_4:38606485-38606504 | None:intergenic | 50.0% | |
| !!! | TTTTGGGGTGGATGAGTTGG+TGG | - | chr7_4:38607240-38607259 | Msa1152760:intron | 50.0% |
| !! | ATCCTCGCTTTTGTCTTGGG+GGG | - | chr7_4:38607344-38607363 | Msa1152760:CDS | 50.0% |
| CAGCACAAACTCCACTGAAC+CGG | + | chr7_4:38607446-38607465 | None:intergenic | 50.0% | |
| ! | ATAGGTTCTGGCTGTTCGGT+GGG | - | chr7_4:38607468-38607487 | Msa1152760:intron | 50.0% |
| CAGTGTCTGTGTTCCTTGTG+TGG | - | chr7_4:38607540-38607559 | Msa1152760:intron | 50.0% | |
| TCTGTGTTCCTTGTGTGGGA+AGG | - | chr7_4:38607545-38607564 | Msa1152760:intron | 50.0% | |
| CTGTGTTCCTTGTGTGGGAA+GGG | - | chr7_4:38607546-38607565 | Msa1152760:intron | 50.0% | |
| TGTGTTCCTTGTGTGGGAAG+GGG | - | chr7_4:38607547-38607566 | Msa1152760:intron | 50.0% | |
| ! | TTTAGTGGGTCTGTTTGCGG+TGG | - | chr7_4:38607596-38607615 | Msa1152760:intron | 50.0% |
| ! | TTGTGCTGGTGGTTCTCTGT+GGG | - | chr7_4:38607660-38607679 | Msa1152760:intron | 50.0% |
| !! | TGAGTTGGTTCTTGGTGGAG+AGG | - | chr7_4:38607730-38607749 | Msa1152760:CDS | 50.0% |
| !! | CTATGTAGCACCGACACATG+TGG | + | chr7_4:38608650-38608669 | None:intergenic | 50.0% |
| TGGATGGCACATACAGCTTC+TGG | + | chr7_4:38608913-38608932 | None:intergenic | 50.0% | |
| ! | ATCCACCACGGCACAGTTTT+TGG | - | chr7_4:38608951-38608970 | Msa1152760:intron | 50.0% |
| TTCCAAAAACTGTGCCGTGG+TGG | + | chr7_4:38608956-38608975 | None:intergenic | 50.0% | |
| CCAACATAGGCTACCGATCT+AGG | + | chr7_4:38609109-38609128 | None:intergenic | 50.0% | |
| CCTAGATCGGTAGCCTATGT+TGG | - | chr7_4:38609106-38609125 | Msa1152760:intron | 50.0% | |
| TCCTTACGCACCATCCTTGA+CGG | - | chr7_4:38609278-38609297 | Msa1152760:intron | 50.0% | |
| CACATTAGTCCCGTCAAGGA+TGG | + | chr7_4:38609291-38609310 | None:intergenic | 50.0% | |
| ACAGTAGCATCATCCCACCA+TGG | + | chr7_4:38609528-38609547 | None:intergenic | 50.0% | |
| GAGGGGAAGCAAGTATGAAG+AGG | - | chr7_4:38609858-38609877 | Msa1152760:intron | 50.0% | |
| GAAAGATTCCGGCGTACGGT+GGG | + | chr7_4:38606474-38606493 | None:intergenic | 55.0% | |
| CCACGAAAGATTCCGGCGTA+CGG | + | chr7_4:38606478-38606497 | None:intergenic | 55.0% | |
| AACCCCCCAAGACAAAAGCG+AGG | + | chr7_4:38607349-38607368 | None:intergenic | 55.0% | |
| ! | TGTTGTTTGGGGGTGGCAGT+TGG | - | chr7_4:38607400-38607419 | Msa1152760:intron | 55.0% |
| !! | CTTTGGTTCTGCCGGTTCAG+TGG | - | chr7_4:38607432-38607451 | Msa1152760:intron | 55.0% |
| ! | CATAGGTTCTGGCTGTTCGG+TGG | - | chr7_4:38607467-38607486 | Msa1152760:intron | 55.0% |
| ! | TGGGCTGTTAGGCATTGTCC+AGG | - | chr7_4:38607487-38607506 | Msa1152760:intron | 55.0% |
| GTGTTCCTTGTGTGGGAAGG+GGG | - | chr7_4:38607548-38607567 | Msa1152760:intron | 55.0% | |
| TGCGAGCCTGTATACTGTCC+TGG | - | chr7_4:38607632-38607651 | Msa1152760:intron | 55.0% | |
| ACCACGCCAGGACAGTATAC+AGG | + | chr7_4:38607641-38607660 | None:intergenic | 55.0% | |
| ! | GTTGTGCTGGTGGTTCTCTG+TGG | - | chr7_4:38607659-38607678 | Msa1152760:intron | 55.0% |
| !! | GAGAGGTGTTCCTTGCGTCA+AGG | - | chr7_4:38607747-38607766 | Msa1152760:CDS | 55.0% |
| GAGCAGTTGTGTCAAGGCAC+TGG | - | chr7_4:38608096-38608115 | Msa1152760:CDS | 55.0% | |
| !! | CAAGGCACTGGTGCAGAACA+AGG | - | chr7_4:38608108-38608127 | Msa1152760:exon | 55.0% |
| CAATGGCAACAGCAGAACCG+AGG | + | chr7_4:38608873-38608892 | None:intergenic | 55.0% | |
| CCTTACGCACCATCCTTGAC+GGG | - | chr7_4:38609279-38609298 | Msa1152760:intron | 55.0% | |
| CAAGCGGCCCACCTATAAAG+AGG | + | chr7_4:38609493-38609512 | None:intergenic | 55.0% | |
| TTCTGTCTCCCACCGTACGC+CGG | - | chr7_4:38606463-38606482 | Msa1152760:intron | 60.0% | |
| CGAAAGATTCCGGCGTACGG+TGG | + | chr7_4:38606475-38606494 | None:intergenic | 60.0% | |
| CCGTACGCCGGAATCTTTCG+TGG | - | chr7_4:38606475-38606494 | Msa1152760:intron | 60.0% | |
| GGTCGTCTCCCATCTTCGTG+AGG | - | chr7_4:38606496-38606515 | Msa1152760:intron | 60.0% | |
| TGTTTGGGGGTGGCAGTTGG+TGG | - | chr7_4:38607403-38607422 | Msa1152760:intron | 60.0% | |
| !! | GCAGTTGGTGGTAGGGGCTT+TGG | - | chr7_4:38607415-38607434 | Msa1152760:intron | 60.0% |
| !! | GGTAGGGGCTTTGGTTCTGC+CGG | - | chr7_4:38607424-38607443 | Msa1152760:intron | 60.0% |
| !! | TGGCTGTTCGGTGGGCTGTT+AGG | - | chr7_4:38607476-38607495 | Msa1152760:intron | 60.0% |
| ATCTGCCCCCTTCCCACACA+AGG | + | chr7_4:38607556-38607575 | None:intergenic | 60.0% | |
| GGTCTGTTTGCGGTGGCACT+TGG | - | chr7_4:38607603-38607622 | Msa1152760:intron | 60.0% | |
| GCCTGTATACTGTCCTGGCG+TGG | - | chr7_4:38607637-38607656 | Msa1152760:intron | 60.0% | |
| ATGGAGAGGGCCTTGACGCA+AGG | + | chr7_4:38607760-38607779 | None:intergenic | 60.0% | |
| GCAACAGCAGAACCGAGGCT+TGG | + | chr7_4:38608868-38608887 | None:intergenic | 60.0% | |
| CCCGTCAAGGATGGTGCGTA+AGG | + | chr7_4:38609282-38609301 | None:intergenic | 60.0% | |
| !! | TGGGGGTGGCAGTTGGTGGT+AGG | - | chr7_4:38607407-38607426 | Msa1152760:intron | 65.0% |
| !! | GGGGGTGGCAGTTGGTGGTA+GGG | - | chr7_4:38607408-38607427 | Msa1152760:intron | 65.0% |
| !! | GGGGTGGCAGTTGGTGGTAG+GGG | - | chr7_4:38607409-38607428 | Msa1152760:intron | 65.0% |
| CTGTCCTGGCGTGGTTGTGC+TGG | - | chr7_4:38607646-38607665 | Msa1152760:intron | 65.0% | |
| TCCTGGCGTGGTTGTGCTGG+TGG | - | chr7_4:38607649-38607668 | Msa1152760:intron | 65.0% | |
| ACCACCAGCACAACCACGCC+AGG | + | chr7_4:38607653-38607672 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 38606218 | 38609996 | 38606218 | ID=Msa1152760;Name=Msa1152760 |
| chr7_4 | mRNA | 38606218 | 38609996 | 38606218 | ID=Msa1152760-mRNA-1;Parent=Msa1152760;Name=Msa1152760-mRNA-1;_AED=0.10;_eAED=0.10;_QI=301|0.88|0.9|1|0.55|0.6|10|121|212 |
| chr7_4 | exon | 38606218 | 38606398 | 38606218 | ID=Msa1152760-mRNA-1:exon:9306;Parent=Msa1152760-mRNA-1 |
| chr7_4 | exon | 38606618 | 38606713 | 38606618 | ID=Msa1152760-mRNA-1:exon:9305;Parent=Msa1152760-mRNA-1 |
| chr7_4 | exon | 38606907 | 38606984 | 38606907 | ID=Msa1152760-mRNA-1:exon:9304;Parent=Msa1152760-mRNA-1 |
| chr7_4 | exon | 38607085 | 38607174 | 38607085 | ID=Msa1152760-mRNA-1:exon:9303;Parent=Msa1152760-mRNA-1 |
| chr7_4 | exon | 38607296 | 38607391 | 38607296 | ID=Msa1152760-mRNA-1:exon:9302;Parent=Msa1152760-mRNA-1 |
| chr7_4 | exon | 38607718 | 38607767 | 38607718 | ID=Msa1152760-mRNA-1:exon:9301;Parent=Msa1152760-mRNA-1 |
| chr7_4 | exon | 38607867 | 38607964 | 38607867 | ID=Msa1152760-mRNA-1:exon:9300;Parent=Msa1152760-mRNA-1 |
| chr7_4 | exon | 38608050 | 38608144 | 38608050 | ID=Msa1152760-mRNA-1:exon:9299;Parent=Msa1152760-mRNA-1 |
| chr7_4 | exon | 38609697 | 38609858 | 38609697 | ID=Msa1152760-mRNA-1:exon:9298;Parent=Msa1152760-mRNA-1 |
| chr7_4 | exon | 38609882 | 38609996 | 38609882 | ID=Msa1152760-mRNA-1:exon:9297;Parent=Msa1152760-mRNA-1 |
| chr7_4 | five_prime_UTR | 38609882 | 38609996 | 38609882 | ID=Msa1152760-mRNA-1:five_prime_utr;Parent=Msa1152760-mRNA-1 |
| chr7_4 | five_prime_UTR | 38609697 | 38609858 | 38609697 | ID=Msa1152760-mRNA-1:five_prime_utr;Parent=Msa1152760-mRNA-1 |
| chr7_4 | five_prime_UTR | 38608121 | 38608144 | 38608121 | ID=Msa1152760-mRNA-1:five_prime_utr;Parent=Msa1152760-mRNA-1 |
| chr7_4 | CDS | 38608050 | 38608120 | 38608050 | ID=Msa1152760-mRNA-1:cds;Parent=Msa1152760-mRNA-1 |
| chr7_4 | CDS | 38607867 | 38607964 | 38607867 | ID=Msa1152760-mRNA-1:cds;Parent=Msa1152760-mRNA-1 |
| chr7_4 | CDS | 38607718 | 38607767 | 38607718 | ID=Msa1152760-mRNA-1:cds;Parent=Msa1152760-mRNA-1 |
| chr7_4 | CDS | 38607296 | 38607391 | 38607296 | ID=Msa1152760-mRNA-1:cds;Parent=Msa1152760-mRNA-1 |
| chr7_4 | CDS | 38607085 | 38607174 | 38607085 | ID=Msa1152760-mRNA-1:cds;Parent=Msa1152760-mRNA-1 |
| chr7_4 | CDS | 38606907 | 38606984 | 38606907 | ID=Msa1152760-mRNA-1:cds;Parent=Msa1152760-mRNA-1 |
| chr7_4 | CDS | 38606618 | 38606713 | 38606618 | ID=Msa1152760-mRNA-1:cds;Parent=Msa1152760-mRNA-1 |
| chr7_4 | CDS | 38606339 | 38606398 | 38606339 | ID=Msa1152760-mRNA-1:cds;Parent=Msa1152760-mRNA-1 |
| chr7_4 | three_prime_UTR | 38606218 | 38606338 | 38606218 | ID=Msa1152760-mRNA-1:three_prime_utr;Parent=Msa1152760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
