AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1153040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1153040 MtrunA17_Chr7g0243681 81.048 496 88 2 1 495 1 491 0.0 836
Msa1153040 MtrunA17_Chr7g0243631 79.800 500 98 2 1 497 1 500 0.0 826
Msa1153040 MtrunA17_Chr7g0243861 81.288 497 92 1 2 497 5 501 0.0 822
Msa1153040 MtrunA17_Chr7g0243951 78.916 498 103 2 1 497 1 497 0.0 815
Msa1153040 MtrunA17_Chr7g0243931 78.313 498 107 1 1 497 7 504 0.0 813
Msa1153040 MtrunA17_Chr4g0060511 78.044 501 106 2 1 497 1 501 0.0 809
Msa1153040 MtrunA17_Chr7g0243771 78.189 486 101 2 8 492 3 484 0.0 798
Msa1153040 MtrunA17_Chr7g0243801 77.079 493 104 3 1 492 1 485 0.0 794
Msa1153040 MtrunA17_Chr7g0243761 77.867 497 81 1 1 497 1 468 0.0 767
Msa1153040 MtrunA17_Chr7g0235051 77.465 497 82 1 1 497 1 467 0.0 764
Msa1153040 MtrunA17_Chr7g0243851 72.691 498 93 2 1 497 1 456 0.0 731
Msa1153040 MtrunA17_Chr7g0243871 68.367 490 144 3 1 490 1 479 0.0 685
Msa1153040 MtrunA17_Chr7g0243781 67.611 494 148 3 1 492 1 484 0.0 670
Msa1153040 MtrunA17_Chr5g0401851 53.374 489 225 2 5 491 4 491 0.0 540
Msa1153040 MtrunA17_Chr8g0355221 53.593 487 223 3 5 490 9 493 0.0 527
Msa1153040 MtrunA17_Chr7g0243811 65.000 400 127 2 23 422 1 387 0.0 516
Msa1153040 MtrunA17_Chr7g0243611 77.419 310 56 1 126 435 1 296 1.14e-177 500
Msa1153040 MtrunA17_Chr1g0165701 52.138 491 231 4 5 495 9 495 1.83e-177 508
Msa1153040 MtrunA17_Chr5g0416741 53.125 480 223 2 8 487 10 487 1.06e-173 498
Msa1153040 MtrunA17_Chr7g0243711 92.188 256 20 0 242 497 75 330 3.86e-171 485
Msa1153040 MtrunA17_Chr7g0243711 81.111 90 16 1 1 90 1 89 7.46e-41 149
Msa1153040 MtrunA17_Chr6g0463891 51.235 486 233 4 10 493 11 494 1.35e-169 487
Msa1153040 MtrunA17_Chr5g0416821 47.984 496 237 5 5 494 4 484 2.47e-159 461
Msa1153040 MtrunA17_Chr4g0044501 46.232 491 246 10 1 486 1 478 7.43e-138 406
Msa1153040 MtrunA17_Chr8g0366391 45.732 492 249 9 1 486 1 480 1.50e-136 403
Msa1153040 MtrunA17_Chr4g0044511 42.946 482 261 7 7 485 36 506 2.65e-135 400
Msa1153040 MtrunA17_Chr4g0066151 43.177 491 248 9 10 490 17 486 9.75e-122 365
Msa1153040 MtrunA17_Chr4g0066261 42.032 502 269 10 1 492 1 490 7.03e-121 363
Msa1153040 MtrunA17_Chr4g0044521 43.035 481 255 8 8 486 6 469 2.88e-120 360
Msa1153040 MtrunA17_Chr4g0066221 41.257 509 262 10 1 492 1 489 9.96e-120 360
Msa1153040 MtrunA17_Chr4g0066201 41.414 495 248 12 10 491 17 482 1.04e-117 355
Msa1153040 MtrunA17_Chr4g0066281 42.531 482 253 9 14 492 15 475 4.36e-117 353
Msa1153040 MtrunA17_Chr7g0275681 41.667 480 262 10 11 483 12 480 7.90e-116 350
Msa1153040 MtrunA17_Chr4g0014061 38.716 483 287 3 10 492 8 481 7.54e-115 347
Msa1153040 MtrunA17_Chr8g0350881 41.837 490 267 7 10 492 11 489 8.96e-115 347
Msa1153040 MtrunA17_Chr7g0243921 75.587 213 47 1 2 214 31 238 9.51e-115 338
Msa1153040 MtrunA17_Chr8g0374901 41.700 494 260 9 9 492 12 487 1.27e-114 347
Msa1153040 MtrunA17_Chr8g0374971 40.568 493 269 7 10 492 11 489 1.48e-113 344
Msa1153040 MtrunA17_Chr5g0419771 40.771 493 274 10 6 487 31 516 1.26e-112 343
Msa1153040 MtrunA17_Chr1g0179901 37.945 506 286 11 1 490 7 500 2.35e-112 341
Msa1153040 MtrunA17_Chr4g0066171 40.080 499 250 14 10 492 20 485 2.50e-112 341
Msa1153040 MtrunA17_Chr4g0066131 41.582 493 257 9 10 492 12 483 3.05e-112 340
Msa1153040 MtrunA17_Chr7g0243911 79.104 201 42 0 268 468 15 215 4.64e-111 328
Msa1153040 MtrunA17_Chr7g0265041 41.200 500 265 14 1 483 1 488 7.58e-111 337
Msa1153040 MtrunA17_Chr4g0011051 37.882 491 287 9 9 487 7 491 1.81e-109 334
Msa1153040 MtrunA17_Chr7g0265141 39.511 491 281 9 1 482 1 484 2.77e-109 333
Msa1153040 MtrunA17_Chr6g0463851 39.721 501 267 11 1 484 1 483 9.10e-109 332
Msa1153040 MtrunA17_Chr5g0419761 40.162 493 274 11 10 488 8 493 1.41e-108 332
Msa1153040 MtrunA17_Chr6g0463861 39.484 504 261 13 1 487 1 477 7.28e-108 329
Msa1153040 MtrunA17_Chr8g0374941 42.276 492 258 9 9 490 949 1424 2.73e-107 348
Msa1153040 MtrunA17_Chr8g0374941 40.710 479 260 8 1 469 1 465 4.35e-101 331
Msa1153040 MtrunA17_Chr8g0374941 41.350 474 256 7 1 465 466 926 2.04e-98 323
Msa1153040 MtrunA17_Chr4g0044481 44.418 421 196 9 11 428 27 412 3.14e-107 326
Msa1153040 MtrunA17_Chr8g0374931 39.726 511 264 13 1 490 1 488 1.36e-106 326
Msa1153040 MtrunA17_Chr7g0265151 38.400 500 274 15 1 483 1 483 8.32e-106 324
Msa1153040 MtrunA17_Chr5g0410941 39.645 507 266 11 1 490 13 496 2.23e-105 323
Msa1153040 MtrunA17_Chr7g0265111 37.402 508 288 12 3 493 31 525 1.19e-104 323
Msa1153040 MtrunA17_Chr2g0294931 39.530 511 269 11 1 492 1 490 2.21e-103 318
Msa1153040 MtrunA17_Chr7g0218311 39.521 501 262 11 10 492 15 492 2.34e-103 318
Msa1153040 MtrunA17_Chr5g0428081 38.976 508 270 10 1 490 1 486 3.10e-103 317
Msa1153040 MtrunA17_Chr7g0265101 36.217 497 294 9 9 492 7 493 5.37e-102 315
Msa1153040 MtrunA17_Chr7g0265051 36.895 496 290 11 9 492 7 491 1.31e-100 311
Msa1153040 MtrunA17_Chr2g0294921 38.867 512 267 13 1 490 150 637 1.70e-99 312
Msa1153040 MtrunA17_Chr7g0231631 52.190 274 111 5 216 487 8 263 1.25e-81 254
Msa1153040 MtrunA17_Chr2g0294941 38.544 371 186 10 119 468 15 364 2.99e-71 231
Msa1153040 MtrunA17_Chr5g0440421 29.191 507 321 12 3 486 2 493 2.51e-66 222
Msa1153040 MtrunA17_Chr7g0243721 73.571 140 37 0 186 325 1 140 2.60e-64 205
Msa1153040 MtrunA17_Chr8g0361411 31.653 496 278 13 9 487 6 457 3.60e-60 204
Msa1153040 MtrunA17_Chr6g0464861 28.343 501 293 15 1 483 1 453 6.27e-59 201
Msa1153040 MtrunA17_Chr2g0329111 28.247 485 289 14 12 469 7 459 2.27e-57 198
Msa1153040 MtrunA17_Chr6g0464881 28.283 495 312 13 1 488 1 459 1.17e-56 195
Msa1153040 MtrunA17_Chr2g0307961 31.697 489 285 15 11 483 13 468 3.33e-56 194
Msa1153040 MtrunA17_Chr6g0464921 29.577 497 294 19 1 483 1 455 4.25e-56 194
Msa1153040 MtrunA17_Chr6g0454341 28.889 495 303 16 11 483 10 477 1.44e-55 193
Msa1153040 MtrunA17_Chr7g0250001 28.715 498 280 19 8 483 3 447 4.74e-55 191
Msa1153040 MtrunA17_Chr6g0464841 28.685 502 291 17 1 483 1 454 8.46e-55 190
Msa1153040 MtrunA17_Chr6g0464871 27.968 497 301 16 1 483 13 466 8.83e-55 190
Msa1153040 MtrunA17_Chr7g0249931 28.513 491 296 17 6 483 35 483 1.15e-54 190
Msa1153040 MtrunA17_Chr1g0207971 27.823 496 307 16 6 489 3 459 1.73e-54 189
Msa1153040 MtrunA17_Chr3g0078841 29.550 511 279 16 11 483 10 477 2.14e-54 189
Msa1153040 MtrunA17_Chr2g0278711 28.854 506 295 16 11 487 11 480 1.61e-53 187
Msa1153040 MtrunA17_Chr6g0454331 27.092 502 317 11 6 483 2 478 1.12e-52 185
Msa1153040 MtrunA17_Chr6g0454191 28.599 521 290 18 3 483 2 480 1.15e-52 185
Msa1153040 MtrunA17_Chr5g0414331 28.659 492 301 14 1 483 3 453 2.75e-52 184
Msa1153040 MtrunA17_Chr7g0231651 46.040 202 102 3 5 201 4 203 3.41e-52 176
Msa1153040 MtrunA17_Chr6g0454261 28.599 514 297 17 11 491 10 486 1.18e-51 182
Msa1153040 MtrunA17_Chr7g0217881 28.776 490 294 15 11 483 10 461 1.67e-51 181
Msa1153040 MtrunA17_Chr6g0454321 28.687 495 294 14 11 478 10 472 2.33e-51 185
Msa1153040 MtrunA17_Chr5g0420801 28.827 503 293 18 6 486 2 461 2.50e-51 181
Msa1153040 MtrunA17_Chr8g0336331 28.740 508 286 16 11 483 10 476 2.64e-51 181
Msa1153040 MtrunA17_Chr7g0275511 31.250 496 273 17 12 479 16 471 2.69e-51 181
Msa1153040 MtrunA17_Chr5g0414321 28.773 497 304 15 1 488 1 456 4.18e-51 180
Msa1153040 MtrunA17_Chr6g0454291 28.544 515 291 16 6 483 2 476 5.90e-51 180
Msa1153040 MtrunA17_Chr7g0232411 38.176 296 145 9 208 486 194 468 1.38e-50 179
Msa1153040 MtrunA17_Chr8g0357361 48.276 203 98 4 214 416 60 255 1.45e-50 173
Msa1153040 MtrunA17_Chr6g0454361 28.431 510 288 16 11 483 11 480 2.01e-50 179
Msa1153040 MtrunA17_Chr5g0426431 30.237 506 290 16 6 483 7 477 2.36e-50 179
Msa1153040 MtrunA17_Chr8g0377921 27.959 490 302 15 11 481 4 461 2.53e-50 178
Msa1153040 MtrunA17_Chr8g0380531 28.773 497 297 16 4 484 3 458 3.67e-50 177
Msa1153040 MtrunA17_Chr7g0249981 27.530 494 305 17 1 483 15 466 3.93e-50 178
Msa1153040 MtrunA17_Chr3g0098111 27.879 495 315 15 6 485 4 471 4.24e-50 178
Msa1153040 MtrunA17_Chr6g0454401 27.027 518 302 15 3 483 2 480 1.55e-49 177
Msa1153040 MtrunA17_Chr4g0050341 30.279 502 293 16 11 484 19 491 2.30e-49 176
Msa1153040 MtrunA17_Chr7g0232391 29.719 498 287 18 10 482 5 464 3.00e-49 176
Msa1153040 MtrunA17_Chr6g0454201 28.543 508 290 15 11 483 11 480 3.44e-49 176
Msa1153040 MtrunA17_Chr8g0359821 28.231 503 296 15 11 483 10 477 4.23e-49 175
Msa1153040 MtrunA17_Chr3g0121991 27.108 498 317 15 11 488 79 550 4.87e-49 177
Msa1153040 MtrunA17_Chr8g0347281 30.632 506 286 18 1 479 1 468 6.48e-49 175
Msa1153040 MtrunA17_Chr5g0448521 27.607 489 312 15 9 481 3 465 7.02e-49 174
Msa1153040 MtrunA17_Chr6g0454301 27.381 504 299 13 11 483 263 730 1.05e-48 178
Msa1153040 MtrunA17_Chr6g0454301 33.061 245 137 6 243 482 6 228 5.40e-33 133
Msa1153040 MtrunA17_Chr6g0462551 33.067 375 207 11 122 481 117 462 1.13e-48 174
Msa1153040 MtrunA17_Chr3g0122001 28.427 496 303 17 11 483 486 952 1.80e-48 179
Msa1153040 MtrunA17_Chr3g0122001 26.854 499 314 17 11 486 6 476 8.53e-46 171
Msa1153040 MtrunA17_Chr6g0454151 28.008 507 292 16 11 483 10 477 1.89e-48 174
Msa1153040 MtrunA17_Chr3g0118701 28.039 510 288 18 11 483 15 482 2.81e-48 173
Msa1153040 MtrunA17_Chr5g0442541 28.112 498 292 16 11 481 5 463 2.83e-48 173
Msa1153040 MtrunA17_Chr3g0079731 27.545 501 301 15 12 480 7 477 2.98e-48 173
Msa1153040 MtrunA17_Chr6g0454181 27.059 510 311 16 3 483 2 479 3.77e-48 173
Msa1153040 MtrunA17_Chr8g0369341 29.762 504 297 20 6 486 2 471 3.81e-48 172
Msa1153040 MtrunA17_Chr6g0453951 27.976 504 298 18 11 483 57 526 4.43e-48 174
Msa1153040 MtrunA17_Chr6g0462531 30.495 505 268 22 12 479 5 463 5.30e-48 172
Msa1153040 MtrunA17_Chr3g0112771 28.039 510 297 16 1 491 1 459 1.51e-47 171
Msa1153040 MtrunA17_Chr1g0207981 27.143 490 328 13 2 483 4 472 1.62e-47 171
Msa1153040 MtrunA17_Chr6g0454141 26.984 504 303 16 11 483 10 479 1.67e-47 171
Msa1153040 MtrunA17_Chr5g0442521 29.006 493 302 15 12 481 6 473 4.69e-47 170
Msa1153040 MtrunA17_Chr5g0442561 27.092 502 299 17 11 481 5 470 5.11e-47 169
Msa1153040 MtrunA17_Chr3g0118691 27.701 509 291 18 11 483 15 482 7.35e-47 169
Msa1153040 MtrunA17_Chr1g0159551 29.959 484 278 17 6 472 9 448 8.88e-47 169
Msa1153040 MtrunA17_Chr3g0118711 27.961 515 304 19 1 483 1 480 1.30e-46 169
Msa1153040 MtrunA17_Chr1g0161351 26.223 511 316 14 1 487 28 501 1.47e-46 169
Msa1153040 MtrunA17_Chr3g0118671 28.911 505 294 19 9 483 4 473 1.48e-46 168
Msa1153040 MtrunA17_Chr8g0361371 28.543 508 294 17 1 480 1 467 2.14e-46 168
Msa1153040 MtrunA17_Chr3g0118771 28.827 503 293 19 11 483 21 488 2.77e-46 168
Msa1153040 MtrunA17_Chr4g0053501 27.733 494 316 15 1 483 1 464 2.95e-46 168
Msa1153040 MtrunA17_Chr3g0092641 28.884 502 302 17 6 483 7 477 4.54e-46 167
Msa1153040 MtrunA17_Chr8g0347271 31.211 487 271 20 17 479 23 469 7.15e-46 166
Msa1153040 MtrunA17_Chr6g0454211 27.273 517 301 15 3 483 289 766 9.93e-46 170
Msa1153040 MtrunA17_Chr6g0454211 25.641 273 151 8 129 387 2 236 4.91e-19 90.5
Msa1153040 MtrunA17_Chr1g0207861 27.165 508 302 20 6 485 3 470 1.09e-45 166
Msa1153040 MtrunA17_Chr6g0462521 34.153 366 182 14 133 479 124 449 1.19e-45 166
Msa1153040 MtrunA17_Chr6g0454131 26.139 505 321 12 3 483 2 478 2.01e-45 166
Msa1153040 MtrunA17_Chr7g0218791 28.689 488 286 16 11 482 5 446 3.02e-45 164
Msa1153040 MtrunA17_Chr1g0173121 29.615 493 271 20 6 472 9 451 3.68e-45 164
Msa1153040 MtrunA17_Chr6g0449931 29.741 501 291 17 11 486 6 470 4.31e-45 164
Msa1153040 MtrunA17_Chr8g0370941 28.736 522 268 22 11 476 8 481 5.00e-45 165
Msa1153040 MtrunA17_Chr6g0462571 29.184 490 292 15 12 481 5 459 5.25e-45 164
Msa1153040 MtrunA17_Chr6g0454121 27.345 501 304 15 11 483 10 478 6.56e-45 164
Msa1153040 MtrunA17_Chr6g0453961 27.668 506 298 17 11 483 19 489 7.31e-45 164
Msa1153040 MtrunA17_Chr8g0377941 27.935 494 306 16 6 483 2 461 8.95e-45 163
Msa1153040 MtrunA17_Chr5g0442581 27.573 515 316 16 12 496 6 493 1.63e-44 164
Msa1153040 MtrunA17_Chr8g0382021 28.157 483 293 16 16 480 39 485 1.77e-44 163
Msa1153040 MtrunA17_Chr1g0207831 25.255 491 318 19 10 484 7 464 1.88e-44 162
Msa1153040 MtrunA17_Chr8g0339451 33.058 363 182 13 140 479 135 459 2.10e-44 162
Msa1153040 MtrunA17_Chr1g0207951 26.899 487 306 15 10 484 123 571 3.31e-44 167
Msa1153040 MtrunA17_Chr1g0207951 27.530 494 298 18 10 483 655 1108 1.20e-42 162
Msa1153040 MtrunA17_Chr6g0454271 32.770 296 178 6 191 483 9 286 4.48e-44 157
Msa1153040 MtrunA17_Chr8g0365811 26.347 501 327 15 1 485 485 959 8.16e-44 166
Msa1153040 MtrunA17_Chr8g0365811 26.522 460 279 16 6 438 4 431 8.57e-38 147
Msa1153040 MtrunA17_Chr6g0486251 28.398 493 297 14 8 479 3 460 8.90e-44 160
Msa1153040 MtrunA17_Chr6g0486201 28.398 493 297 14 8 479 3 460 8.90e-44 160
Msa1153040 MtrunA17_Chr6g0452771 27.345 501 305 16 11 483 10 479 1.02e-43 160
Msa1153040 MtrunA17_Chr8g0335161 27.968 497 290 16 11 479 6 462 1.04e-43 160
Msa1153040 MtrunA17_Chr7g0232341 34.405 311 162 10 197 488 184 471 1.16e-43 160
Msa1153040 MtrunA17_Chr7g0218841 28.243 478 289 17 11 480 6 437 1.48e-43 159
Msa1153040 MtrunA17_Chr6g0454351 28.937 508 271 23 11 483 12 464 1.55e-43 160
Msa1153040 MtrunA17_Chr8g0339631 34.395 314 164 9 192 487 183 472 1.63e-43 160
Msa1153040 MtrunA17_Chr7g0243731 87.500 80 10 0 340 419 1 80 1.88e-43 148
Msa1153040 MtrunA17_Chr7g0218811 26.931 479 296 15 11 481 15 447 3.23e-43 159
Msa1153040 MtrunA17_Chr8g0339601 33.431 341 172 12 161 479 19 326 3.61e-43 155
Msa1153040 MtrunA17_Chr7g0232331 36.620 284 145 8 217 486 207 469 4.73e-43 159
Msa1153040 MtrunA17_Chr8g0335141 28.740 508 283 17 12 486 10 471 6.11e-43 158
Msa1153040 MtrunA17_Chr6g0459311 27.800 500 283 13 12 479 14 467 7.01e-43 158
Msa1153040 MtrunA17_Chr7g0218821 27.515 487 300 16 11 484 5 451 8.44e-43 157
Msa1153040 MtrunA17_Chr5g0442491 28.800 500 293 16 12 481 6 472 8.52e-43 158
Msa1153040 MtrunA17_Chr8g0334831 28.458 506 288 18 12 480 7 475 9.26e-43 158
Msa1153040 MtrunA17_Chr4g0053321 27.381 504 309 16 10 492 25 492 1.53e-42 158
Msa1153040 MtrunA17_Chr7g0218831 27.254 477 294 15 11 480 6 436 2.42e-42 156
Msa1153040 MtrunA17_Chr8g0336651 37.627 295 141 8 204 479 969 1239 2.59e-42 161
Msa1153040 MtrunA17_Chr8g0336651 37.363 273 128 6 217 487 547 778 4.02e-40 155
Msa1153040 MtrunA17_Chr8g0336651 32.808 317 166 10 188 479 166 460 1.11e-35 142
Msa1153040 MtrunA17_Chr5g0442601 28.373 504 292 19 12 481 405 873 2.92e-42 161
Msa1153040 MtrunA17_Chr5g0442601 30.323 310 156 11 121 410 64 333 1.39e-26 114
Msa1153040 MtrunA17_Chr8g0336691 28.770 504 295 16 10 487 12 477 3.15e-42 161
Msa1153040 MtrunA17_Chr8g0336691 37.410 278 137 8 217 479 1120 1375 5.77e-40 154
Msa1153040 MtrunA17_Chr8g0336691 29.878 492 277 18 10 487 479 916 2.16e-37 147
Msa1153040 MtrunA17_Chr5g0429711 28.274 481 305 18 12 483 12 461 3.79e-42 156
Msa1153040 MtrunA17_Chr5g0412101 27.038 503 318 17 1 485 1 472 4.96e-42 156
Msa1153040 MtrunA17_Chr5g0431361 26.839 503 297 16 3 485 4 455 6.98e-42 155
Msa1153040 MtrunA17_Chr8g0339461 35.099 302 151 10 192 472 183 460 1.30e-41 155
Msa1153040 MtrunA17_Chr4g0066141 47.399 173 90 1 321 492 188 360 1.35e-41 152
Msa1153040 MtrunA17_Chr4g0066141 39.086 197 98 6 39 232 8 185 1.58e-28 116
Msa1153040 MtrunA17_Chr5g0412131 26.789 489 315 15 11 485 12 471 4.03e-41 153
Msa1153040 MtrunA17_Chr7g0232401 33.645 321 175 10 180 485 172 469 4.78e-41 153
Msa1153040 MtrunA17_Chr6g0462541 28.313 498 288 17 12 481 5 461 6.35e-41 153
Msa1153040 MtrunA17_Chr3g0118661 27.054 499 304 15 11 482 13 478 6.70e-41 153
Msa1153040 MtrunA17_Chr5g0423981 26.230 488 292 16 11 483 10 444 7.97e-41 152
Msa1153040 MtrunA17_Chr5g0431441 26.611 481 298 15 11 476 18 458 8.39e-41 152
Msa1153040 MtrunA17_Chr5g0412111 26.327 490 315 16 11 485 5 463 8.71e-41 152
Msa1153040 MtrunA17_Chr3g0112761 26.721 494 295 13 11 486 8 452 1.17e-40 152
Msa1153040 MtrunA17_Chr2g0302961 26.854 499 307 16 8 483 2 465 4.23e-40 150
Msa1153040 MtrunA17_Chr8g0339441 41.553 219 101 6 275 478 218 424 5.65e-40 149
Msa1153040 MtrunA17_Chr8g0373301 33.233 331 165 11 177 485 172 468 1.15e-39 149
Msa1153040 MtrunA17_Chr1g0153451 37.319 276 137 7 217 479 207 459 1.36e-39 149
Msa1153040 MtrunA17_Chr7g0232311 34.173 278 145 6 217 480 207 460 2.96e-39 148
Msa1153040 MtrunA17_Chr1g0153461 40.000 230 106 6 273 486 2 215 7.35e-39 140
Msa1153040 MtrunA17_Chr5g0429681 27.621 496 312 19 1 481 34 497 1.04e-38 147
Msa1153040 MtrunA17_Chr5g0409591 24.756 513 305 13 12 478 5 482 1.37e-38 147
Msa1153040 MtrunA17_Chr8g0336731 31.234 381 209 12 122 480 138 487 1.47e-38 147
Msa1153040 MtrunA17_Chr6g0454251 27.184 412 253 12 6 388 2 395 1.82e-38 144
Msa1153040 MtrunA17_Chr5g0431421 26.132 486 309 15 8 485 7 450 2.12e-38 145
Msa1153040 MtrunA17_Chr8g0334861 32.432 370 195 15 135 480 122 460 9.04e-38 144
Msa1153040 MtrunA17_Chr1g0207931 25.152 493 276 15 5 484 86 498 9.62e-38 144
Msa1153040 MtrunA17_Chr5g0403641 26.800 500 279 17 9 479 57 498 1.62e-37 144
Msa1153040 MtrunA17_Chr8g0334851 32.544 338 175 11 173 488 168 474 1.62e-37 143
Msa1153040 MtrunA17_Chr5g0442511 32.432 296 170 9 203 484 215 494 2.76e-37 143
Msa1153040 MtrunA17_Chr5g0431401 25.309 486 313 13 8 485 7 450 4.57e-37 142
Msa1153040 MtrunA17_Chr2g0278741 26.987 478 290 16 1 459 87 524 5.46e-37 143
Msa1153040 MtrunA17_Chr2g0278721 27.484 473 288 15 4 459 8 442 6.33e-37 145
Msa1153040 MtrunA17_Chr2g0278721 24.628 471 301 17 10 459 516 953 3.42e-26 112
Msa1153040 MtrunA17_Chr8g0336741 28.402 507 277 21 9 479 11 467 9.13e-37 141
Msa1153040 MtrunA17_Chr2g0302991 27.364 497 304 17 8 483 2 462 1.44e-36 140
Msa1153040 MtrunA17_Chr5g0393591 25.150 501 289 16 11 496 17 446 2.80e-36 140
Msa1153040 MtrunA17_Chr8g0336251 27.391 460 304 14 6 457 2 439 3.26e-36 140
Msa1153040 MtrunA17_Chr6g0454221 34.440 241 140 5 243 482 6 229 4.48e-36 135
Msa1153040 MtrunA17_Chr8g0336321 27.391 460 304 14 6 457 2 439 9.18e-36 138
Msa1153040 MtrunA17_Chr5g0431371 26.151 478 313 13 11 485 10 450 9.87e-36 138
Msa1153040 MtrunA17_Chr4g0069611 26.247 461 292 14 10 459 14 437 1.07e-35 138
Msa1153040 MtrunA17_Chr4g0032331 26.981 467 291 16 1 458 1 426 1.27e-35 138
Msa1153040 MtrunA17_Chr3g0118751 26.441 503 276 19 11 483 6 444 6.51e-35 135
Msa1153040 MtrunA17_Chr5g0432731 28.571 322 196 8 171 486 6 299 7.31e-35 132
Msa1153040 MtrunA17_Chr4g0072771 28.313 498 283 18 9 485 23 467 7.97e-35 135
Msa1153040 MtrunA17_Chr3g0118721 34.058 276 155 9 214 483 35 289 3.29e-34 130
Msa1153040 MtrunA17_Chr7g0241781 26.915 457 270 14 9 459 7 405 4.23e-34 133
Msa1153040 MtrunA17_Chr7g0249961 32.500 240 143 6 245 483 38 259 5.24e-34 129
Msa1153040 MtrunA17_Chr7g0241801 26.566 463 264 15 9 459 7 405 8.10e-34 132
Msa1153040 MtrunA17_Chr8g0355011 27.586 377 196 11 121 483 48 361 1.14e-33 130
Msa1153040 MtrunA17_Chr3g0106231 25.160 469 306 14 11 476 18 444 1.75e-33 132
Msa1153040 MtrunA17_Chr5g0426401 30.928 291 179 5 176 462 16 288 3.48e-33 128
Msa1153040 MtrunA17_Chr3g0079711 39.175 194 93 5 301 480 3 185 5.68e-33 124
Msa1153040 MtrunA17_Chr5g0401721 24.254 503 315 17 9 483 6 470 6.41e-33 130
Msa1153040 MtrunA17_Chr6g0466831 26.797 459 292 15 10 459 17 440 1.67e-32 129
Msa1153040 MtrunA17_Chr6g0454171 28.025 314 187 8 175 483 30 309 2.96e-32 125
Msa1153040 MtrunA17_Chr1g0196851 26.068 468 278 14 8 452 46 468 7.95e-32 127
Msa1153040 MtrunA17_Chr4g0042931 27.613 507 297 21 6 485 2 465 2.13e-31 126
Msa1153040 MtrunA17_Chr4g0072761 26.434 488 299 17 7 480 11 452 2.72e-31 125
Msa1153040 MtrunA17_Chr6g0466841 26.144 459 295 15 10 459 17 440 1.69e-30 123
Msa1153040 MtrunA17_Chr5g0448551 27.273 418 251 18 12 410 8 391 2.55e-30 123
Msa1153040 MtrunA17_Chr3g0106251 30.651 261 151 7 219 476 53 286 4.69e-30 119
Msa1153040 MtrunA17_Chr4g0042891 27.545 501 307 17 6 485 2 467 9.49e-30 121
Msa1153040 MtrunA17_Chr4g0040691 25.106 470 296 12 6 458 3 433 1.68e-29 120
Msa1153040 MtrunA17_Chr6g0464091 28.230 418 260 14 10 411 17 410 2.86e-29 120
Msa1153040 MtrunA17_Chr2g0302851 26.652 469 280 17 10 459 15 438 6.21e-29 119
Msa1153040 MtrunA17_Chr4g0029131 25.386 453 277 15 7 442 8 416 1.62e-28 119
Msa1153040 MtrunA17_Chr6g0454371 33.880 183 104 4 301 483 5 170 2.22e-28 110
Msa1153040 MtrunA17_Chr6g0482061 26.327 490 317 18 1 470 1 466 5.83e-28 116
Msa1153040 MtrunA17_Chr4g0039881 26.316 456 274 18 21 458 2 413 9.33e-28 115
Msa1153040 MtrunA17_Chr8g0367221 28.205 429 261 15 10 418 797 1198 1.23e-27 117
Msa1153040 MtrunA17_Chr8g0367221 26.389 432 264 17 10 418 11 411 3.93e-23 103
Msa1153040 MtrunA17_Chr8g0367221 28.302 212 132 7 277 485 1548 1742 4.63e-15 78.6
Msa1153040 MtrunA17_Chr7g0232351 40.761 184 84 6 217 387 207 378 3.37e-27 112
Msa1153040 MtrunA17_Chr4g0040711 24.583 480 286 15 6 458 3 433 4.60e-26 110
Msa1153040 MtrunA17_Chr3g0092031 35.829 187 98 7 277 459 6 174 5.01e-26 105
Msa1153040 MtrunA17_Chr4g0029151 25.160 469 280 18 7 452 16 436 5.81e-25 107
Msa1153040 MtrunA17_Chr8g0337381 40.714 140 69 3 348 486 2 128 1.11e-24 99.4
Msa1153040 MtrunA17_Chr2g0283041 23.232 495 318 17 8 483 4 455 2.54e-24 105
Msa1153040 MtrunA17_Chr6g0454231 28.413 271 131 9 217 483 7 218 1.13e-23 103
Msa1153040 MtrunA17_Chr1g0207881 23.061 477 267 16 10 484 7 385 6.39e-23 100
Msa1153040 MtrunA17_Chr2g0319761 24.733 469 308 13 10 468 7 440 9.67e-23 100
Msa1153040 MtrunA17_Chr2g0319801 25.157 477 289 17 5 458 2 433 2.45e-22 99.8
Msa1153040 MtrunA17_Chr8g0336261 35.570 149 80 3 301 449 5 137 2.62e-22 92.8
Msa1153040 MtrunA17_Chr7g0250021 24.269 342 217 9 6 332 7 321 2.83e-22 97.8
Msa1153040 MtrunA17_Chr5g0431431 30.045 223 117 8 219 438 157 343 1.07e-20 93.6
Msa1153040 MtrunA17_Chr2g0319731 23.789 475 306 14 1 458 15 450 1.43e-20 94.4
Msa1153040 MtrunA17_Chr5g0427571 31.522 184 112 5 275 457 103 273 4.63e-20 90.9
Msa1153040 MtrunA17_Chr2g0319751 24.078 461 304 12 10 458 484 910 6.10e-20 93.6
Msa1153040 MtrunA17_Chr2g0319751 23.427 461 283 14 10 458 7 409 7.63e-19 90.1
Msa1153040 MtrunA17_Chr2g0319791 24.086 465 299 16 10 458 7 433 1.22e-19 91.7
Msa1153040 MtrunA17_Chr4g0029161 24.062 453 255 18 7 442 8 388 5.41e-18 86.3
Msa1153040 MtrunA17_Chr4g0066231 48.750 80 35 2 386 462 1 77 4.66e-16 73.2
Msa1153040 MtrunA17_Chr6g0453981 27.778 216 122 8 130 323 3 206 4.86e-15 74.7
Msa1153040 MtrunA17_Chr7g0272701 31.746 126 83 2 102 224 27 152 5.01e-14 69.7
Msa1153040 MtrunA17_Chr6g0477011 25.240 313 200 8 10 312 15 303 1.07e-13 72.0
Msa1153040 MtrunA17_Chr6g0453941 28.571 161 99 4 171 323 107 259 1.50e-12 68.2
Msa1153040 MtrunA17_Chr4g0066241 35.433 127 60 6 170 289 38 149 4.06e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1153040 AT2G15490.3 41.818 495 260 10 6 487 2 481 3.03e-130 387
Msa1153040 AT2G15490.1 41.365 498 261 10 6 487 2 484 7.79e-129 383
Msa1153040 AT4G34131.1 42.276 492 263 11 3 485 2 481 3.28e-127 379
Msa1153040 AT2G15480.2 40.792 505 267 12 3 487 2 494 5.35e-126 377
Msa1153040 AT2G15480.1 40.562 498 268 10 3 487 2 484 6.29e-126 376
Msa1153040 AT2G36770.1 39.638 497 286 8 2 490 5 495 3.45e-121 364
Msa1153040 AT4G34135.1 41.296 494 270 10 1 485 1 483 3.55e-120 361
Msa1153040 AT2G36800.1 40.164 488 273 10 10 486 11 490 5.10e-119 358
Msa1153040 AT2G36780.1 38.990 495 292 7 2 490 5 495 6.32e-119 358
Msa1153040 AT2G36760.1 39.388 490 283 9 10 491 13 496 1.27e-116 352
Msa1153040 AT2G36790.1 40.408 490 274 10 10 489 12 493 1.11e-113 345
Msa1153040 AT2G36750.1 38.788 495 276 10 10 490 9 490 1.15e-113 345
Msa1153040 AT4G34138.1 39.069 494 274 10 8 490 8 485 3.33e-110 336
Msa1153040 AT3G53160.1 37.295 488 288 9 6 483 3 482 3.55e-104 320
Msa1153040 AT3G53150.1 37.649 502 292 8 1 483 10 509 1.11e-102 317
Msa1153040 AT4G34135.2 37.879 330 194 5 1 322 1 327 9.93e-73 234
Msa1153040 AT2G16890.2 33.667 499 277 18 11 489 9 473 1.20e-67 225
Msa1153040 AT5G14860.1 33.202 509 280 20 1 483 1 475 6.06e-66 221
Msa1153040 AT2G16890.3 34.004 447 243 16 11 438 9 422 6.57e-62 208
Msa1153040 AT1G10400.1 32.587 491 282 17 9 483 5 462 2.27e-61 208
Msa1153040 AT1G22400.1 30.888 518 300 17 1 490 1 488 4.43e-61 208
Msa1153040 AT1G22380.1 31.590 478 276 16 11 464 13 463 9.10e-61 207
Msa1153040 AT1G73880.1 29.880 502 306 18 2 490 5 473 7.81e-58 199
Msa1153040 AT1G22340.1 31.434 509 295 18 1 483 1 481 2.62e-57 198
Msa1153040 AT5G03490.1 30.309 485 291 17 11 486 19 465 1.65e-56 195
Msa1153040 AT5G12890.1 28.543 501 315 13 3 482 2 480 7.34e-56 194
Msa1153040 AT1G22360.1 29.159 511 300 15 1 483 1 477 7.79e-56 194
Msa1153040 AT1G78270.1 30.078 512 285 17 6 483 8 480 3.99e-53 187
Msa1153040 AT1G05675.1 28.364 483 294 13 11 480 6 449 9.52e-53 185
Msa1153040 AT1G22360.2 29.932 441 262 12 1 414 1 421 3.39e-52 184
Msa1153040 AT1G51210.1 30.283 459 265 19 11 459 20 433 1.11e-51 181
Msa1153040 AT1G22370.2 30.660 424 267 12 6 414 8 419 2.91e-51 181
Msa1153040 AT1G05680.1 27.536 483 298 13 11 480 6 449 1.52e-50 179
Msa1153040 AT2G31750.1 28.513 491 289 18 11 483 8 454 1.11e-49 177
Msa1153040 AT2G31750.2 28.513 491 289 18 11 483 8 454 1.84e-49 177
Msa1153040 AT4G01070.1 30.400 500 291 17 11 488 8 472 6.57e-49 175
Msa1153040 AT2G43820.1 28.600 493 291 20 7 485 3 448 1.12e-48 174
Msa1153040 AT5G05870.1 27.565 497 298 14 5 483 2 454 1.56e-48 174
Msa1153040 AT1G01420.2 31.361 507 272 22 1 476 1 462 1.84e-48 174
Msa1153040 AT1G01420.1 31.600 500 266 22 8 476 5 459 5.68e-48 172
Msa1153040 AT3G21800.1 28.094 509 298 17 8 483 2 475 1.75e-47 171
Msa1153040 AT2G43840.1 28.099 484 295 16 11 484 7 447 2.18e-47 170
Msa1153040 AT5G26310.1 29.572 514 270 19 11 484 7 468 4.65e-47 170
Msa1153040 AT2G43840.2 27.893 484 296 16 11 484 7 447 6.44e-47 169
Msa1153040 AT3G50740.1 28.927 522 273 22 11 486 7 476 1.10e-46 169
Msa1153040 AT2G36970.1 27.821 514 318 17 1 494 1 481 2.19e-46 169
Msa1153040 AT5G05860.1 26.680 491 290 15 4 476 2 440 2.84e-46 167
Msa1153040 AT2G29740.1 27.539 512 304 16 1 483 1 474 2.92e-46 168
Msa1153040 AT4G15490.1 26.316 494 308 13 11 483 8 466 3.58e-46 168
Msa1153040 AT3G21760.1 28.462 520 286 19 9 483 2 480 6.91e-46 167
Msa1153040 AT2G29730.1 27.381 504 299 17 10 487 4 466 9.15e-46 166
Msa1153040 AT2G31790.1 26.471 476 314 11 11 480 8 453 1.50e-45 166
Msa1153040 AT1G24100.1 28.041 485 300 14 11 483 11 458 1.54e-45 166
Msa1153040 AT3G02100.1 27.579 504 297 18 3 485 5 461 2.42e-45 165
Msa1153040 AT3G16520.3 27.088 491 296 15 12 480 6 456 7.44e-45 164
Msa1153040 AT5G66690.1 28.265 513 278 19 11 484 7 468 1.54e-44 163
Msa1153040 AT2G28080.1 26.681 476 320 10 15 485 22 473 1.60e-44 163
Msa1153040 AT4G15260.1 30.079 379 207 10 132 483 7 354 3.21e-44 159
Msa1153040 AT2G18570.1 27.092 502 293 20 8 478 2 461 4.88e-44 162
Msa1153040 AT4G15500.1 26.465 495 309 17 11 487 9 466 6.08e-44 161
Msa1153040 AT4G15480.1 26.680 506 312 19 1 483 9 478 6.44e-44 162
Msa1153040 AT3G21790.1 27.203 522 288 19 9 483 2 478 7.36e-44 162
Msa1153040 AT1G06000.1 28.980 490 265 19 11 483 10 433 1.36e-43 160
Msa1153040 AT3G11340.1 27.664 488 291 14 12 486 9 447 1.51e-43 160
Msa1153040 AT1G07260.1 25.889 506 306 17 9 483 4 471 3.49e-43 159
Msa1153040 AT4G15280.2 27.099 524 297 17 1 483 26 505 3.76e-43 160
Msa1153040 AT2G30150.2 27.621 496 286 17 11 486 13 455 7.69e-43 158
Msa1153040 AT4G15280.1 27.326 516 290 17 9 483 2 473 1.33e-42 158
Msa1153040 AT3G16520.2 26.931 479 288 15 12 468 6 444 1.40e-42 157
Msa1153040 AT3G16520.1 26.931 479 288 15 12 468 6 444 1.73e-42 157
Msa1153040 AT1G07250.1 27.647 510 293 18 9 483 4 472 3.69e-42 157
Msa1153040 AT3G46680.1 27.160 486 292 17 11 481 9 447 4.40e-42 156
Msa1153040 AT4G36770.1 27.236 492 279 17 9 469 2 445 2.85e-41 154
Msa1153040 AT2G30150.1 27.236 492 285 17 15 486 1 439 3.49e-41 153
Msa1153040 AT5G05880.1 26.494 502 297 15 5 486 2 451 5.57e-41 153
Msa1153040 AT5G59590.1 26.069 491 313 16 1 483 1 449 5.60e-41 153
Msa1153040 AT3G21560.1 24.900 498 312 15 11 483 12 472 2.25e-40 152
Msa1153040 AT3G46650.1 28.085 470 280 14 11 476 10 425 2.30e-40 151
Msa1153040 AT2G30140.1 25.615 488 293 13 11 480 13 448 3.20e-40 151
Msa1153040 AT1G01390.1 31.176 510 280 22 8 488 5 472 1.08e-39 150
Msa1153040 AT4G14090.1 24.847 491 311 14 6 482 8 454 1.44e-39 149
Msa1153040 AT3G55700.1 26.069 491 303 15 11 486 8 453 1.68e-39 149
Msa1153040 AT1G01390.2 31.984 494 265 22 8 472 22 473 1.71e-39 150
Msa1153040 AT4G15550.1 27.677 495 300 16 11 482 13 472 1.80e-39 149
Msa1153040 AT2G23250.1 27.484 473 288 17 21 483 8 435 3.43e-39 148
Msa1153040 AT5G05900.1 26.747 501 280 18 8 481 5 445 4.60e-39 147
Msa1153040 AT2G30140.2 25.615 488 292 14 11 480 13 447 4.63e-39 147
Msa1153040 AT5G59580.1 26.585 489 299 18 11 486 9 450 1.01e-38 147
Msa1153040 AT2G23260.1 25.052 483 319 16 8 483 7 453 2.83e-38 145
Msa1153040 AT1G07240.1 25.956 497 316 13 12 483 6 475 7.09e-38 145
Msa1153040 AT3G21780.1 25.447 503 311 18 9 483 2 468 7.94e-38 145
Msa1153040 AT3G21750.1 29.376 497 299 22 9 483 2 468 7.95e-38 145
Msa1153040 AT2G18560.1 35.047 214 119 5 275 478 168 371 8.34e-38 142
Msa1153040 AT2G29710.1 26.747 501 294 20 12 483 6 462 9.12e-38 144
Msa1153040 AT3G46700.1 26.518 494 288 17 11 485 9 446 1.32e-37 144
Msa1153040 AT3G46660.1 26.598 485 305 17 12 486 15 458 2.14e-37 143
Msa1153040 AT1G05530.1 27.879 495 294 18 9 483 3 454 3.87e-37 142
Msa1153040 AT2G15490.2 32.642 193 114 3 6 186 2 190 1.07e-36 137
Msa1153040 AT2G15490.2 42.045 88 45 2 400 487 189 270 5.77e-12 66.6
Msa1153040 AT1G22370.1 34.842 221 138 4 196 414 33 249 2.28e-36 137
Msa1153040 AT2G29750.1 26.747 501 304 18 11 483 8 473 8.09e-36 139
Msa1153040 AT3G46670.1 26.747 501 284 21 11 486 9 451 9.32e-36 138
Msa1153040 AT5G05890.1 24.950 501 310 13 5 486 2 455 1.21e-35 138
Msa1153040 AT3G46690.1 26.667 495 291 15 11 485 9 451 3.92e-35 137
Msa1153040 AT5G38010.1 25.251 499 311 15 1 483 1 453 7.06e-35 136
Msa1153040 AT3G46720.1 26.694 487 292 15 11 485 9 442 1.19e-34 135
Msa1153040 AT5G49690.1 25.251 499 304 17 10 491 9 455 1.44e-33 132
Msa1153040 AT2G26480.1 25.780 481 304 15 9 480 6 442 1.79e-32 129
Msa1153040 AT3G55710.1 26.327 490 313 14 11 489 8 460 2.18e-32 129
Msa1153040 AT5G38040.1 26.392 485 280 16 21 483 20 449 2.28e-32 129
Msa1153040 AT2G16890.4 32.399 321 177 13 11 312 9 308 2.76e-30 120
Msa1153040 AT2G16890.1 32.399 321 177 13 11 312 9 308 2.76e-30 120
Msa1153040 AT1G05560.1 26.400 500 288 21 11 483 5 451 4.59e-30 122
Msa1153040 AT1G05560.2 26.653 499 288 21 11 483 55 501 5.43e-30 123
Msa1153040 AT1G30530.1 24.096 498 294 15 11 483 12 450 7.34e-30 122
Msa1153040 AT5G17030.1 23.896 498 314 17 4 483 5 455 1.23e-28 118
Msa1153040 AT5G17050.1 34.450 209 117 5 275 483 268 456 1.32e-28 118
Msa1153040 AT5G65550.1 25.160 469 308 13 9 460 7 449 1.80e-28 118
Msa1153040 AT2G22590.1 25.263 475 290 17 8 458 12 445 3.91e-28 117
Msa1153040 AT5G17040.2 29.151 271 162 8 214 483 96 337 8.12e-28 114
Msa1153040 AT5G17040.1 29.151 271 162 8 214 483 198 439 1.02e-27 115
Msa1153040 AT3G29630.1 26.531 490 308 17 8 490 3 447 2.73e-26 111
Msa1153040 AT3G29630.2 26.789 489 282 19 8 490 3 421 1.10e-25 109
Msa1153040 AT3G22250.1 24.444 495 282 19 12 467 9 450 1.49e-24 106
Msa1153040 AT4G27560.1 24.612 451 283 13 9 447 5 410 3.19e-23 102
Msa1153040 AT4G27570.1 24.834 451 282 13 9 447 5 410 3.32e-23 102
Msa1153040 AT5G54010.1 24.043 470 289 16 8 464 3 417 1.35e-22 100
Msa1153040 AT1G50580.1 26.752 471 266 20 8 457 3 415 1.68e-22 100
Msa1153040 AT1G64910.1 24.228 421 266 13 10 418 5 384 9.55e-22 98.2
Msa1153040 AT5G53990.1 24.229 454 288 15 10 454 5 411 2.61e-21 97.1
Msa1153040 AT1G64920.1 23.752 501 301 20 8 486 3 444 6.28e-21 95.9
Msa1153040 AT2G22930.1 24.224 483 309 18 10 484 5 438 1.31e-20 94.7
Msa1153040 AT4G09500.1 24.283 453 275 15 9 458 4 391 1.44e-19 91.3
Msa1153040 AT4G09500.2 24.520 469 279 17 9 458 4 416 4.86e-19 90.1
Msa1153040 AT5G37950.1 24.653 288 185 7 112 387 76 343 1.13e-18 87.8
Msa1153040 AT5G37950.2 35.833 120 75 2 268 387 220 337 6.80e-18 85.5
Msa1153040 AT4G01070.2 27.103 321 201 12 11 321 8 305 6.63e-16 79.7
Msa1153040 AT5G54060.1 21.328 497 327 16 8 480 10 466 1.86e-15 79.0

Find 101 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGAATATCAATTGGATTT+TGG 0.156601 7_4:-39195792 None:intergenic
GAGCAAAAGAAAATAATTTA+TGG 0.191416 7_4:+39196712 Msa1153040:CDS
TCCTCATTTCTTTGCTCTCT+TGG 0.225932 7_4:-39196809 None:intergenic
TTCAAACATTGGTTCAAAAT+AGG 0.257568 7_4:-39196082 None:intergenic
GGCACCGCAGCTTCTGATAT+TGG 0.276304 7_4:+39196530 Msa1153040:CDS
TCCTTTCCTCAAATTCTTGC+AGG 0.277391 7_4:-39196470 None:intergenic
TAAACTGATGTCACTGTCTA+TGG 0.282943 7_4:-39195638 None:intergenic
CAACAAGGATAATGAGAAAA+AGG 0.300601 7_4:+39196230 Msa1153040:CDS
GTCTATACTTCATCATAAAA+TGG 0.310066 7_4:-39195942 None:intergenic
GTGCAAGCAGCTGCAAAATT+AGG 0.323018 7_4:+39195868 Msa1153040:CDS
ACACAGAAATTTACAATTCC+TGG 0.324450 7_4:+39195988 Msa1153040:CDS
AGGGCTATATCATATGGAAT+TGG 0.329637 7_4:+39196508 Msa1153040:CDS
AAGAGGAAGAATGGCTAAAT+TGG 0.331172 7_4:+39196283 Msa1153040:CDS
AAACAACATGAAGTTGGTTA+TGG 0.334994 7_4:-39195492 None:intergenic
GTAACAATCCCTCCTGTTGC+AGG 0.352114 7_4:-39196558 None:intergenic
GGAAGGCACAGTTGGAGAAT+TGG 0.354123 7_4:-39195921 None:intergenic
AGTAACATTAACACCATGTT+TGG 0.375703 7_4:-39195575 None:intergenic
AAACTTAGTAACACTACAAT+GGG 0.379675 7_4:+39196168 Msa1153040:CDS
TTTCTTCCATTTCCAACTCC+TGG 0.384999 7_4:+39195514 Msa1153040:CDS
GAAATCATTGAAGAAATCTA+AGG 0.391534 7_4:+39196923 Msa1153040:CDS
AACAACATGAAGTTGGTTAT+GGG 0.392319 7_4:-39195491 None:intergenic
ATAGACAGTGACATCAGTTT+AGG 0.393163 7_4:+39195640 Msa1153040:CDS
TTCTTTGTATGCAACCAATC+AGG 0.401649 7_4:-39196048 None:intergenic
GAGCTGTAATAATGAATTCT+CGG 0.404400 7_4:-39195895 None:intergenic
CTCCTCTGCAAATTCCTGAT+TGG 0.408115 7_4:+39196034 Msa1153040:CDS
CCATCAAAACTCAACTTCTT+CGG 0.410261 7_4:+39195668 Msa1153040:CDS
TTGTTGATCCAAGCTGAAAC+TGG 0.412410 7_4:-39196213 None:intergenic
AGTCTTGCTGTCTCTATCAT+TGG 0.414754 7_4:-39195547 None:intergenic
TGCAGAGAAAGTGGTGAGAA+GGG 0.417082 7_4:+39196746 Msa1153040:CDS
ACCTTCCTCTATAGTCCTCT+TGG 0.417533 7_4:-39196859 None:intergenic
TCTGTATTGTATGTATGTTT+TGG 0.426684 7_4:+39196327 Msa1153040:CDS
AGGTTTCCTGCAAGAATTTG+AGG 0.431395 7_4:+39196464 Msa1153040:CDS
CTACAATGGGGATCAAATCT+TGG 0.433304 7_4:+39196181 Msa1153040:CDS
TCTTGAAACAGAATATCAAT+TGG 0.444984 7_4:-39195799 None:intergenic
GAATCAGAGAAAAGAAGTTA+TGG 0.445363 7_4:+39196102 Msa1153040:CDS
ATATGACCAGGAGTTGGAAA+TGG 0.449879 7_4:-39195520 None:intergenic
GCGAAAAGGGCTATATCATA+TGG 0.452151 7_4:+39196502 Msa1153040:CDS
GGGCTATATCATATGGAATT+GGG 0.452750 7_4:+39196509 Msa1153040:CDS
ATATTGGATCACCCTGCAAC+AGG 0.456850 7_4:+39196546 Msa1153040:CDS
CGGTTCCCTTCAGCTCAAGT+TGG 0.461615 7_4:+39195688 Msa1153040:CDS
CATAAAATGGAAGGCACAGT+TGG 0.477919 7_4:-39195929 None:intergenic
ATGCAGAGAAAGTGGTGAGA+AGG 0.478166 7_4:+39196745 Msa1153040:CDS
AACACCGGCCACGTGATCAT+TGG 0.481036 7_4:-39196627 None:intergenic
CATAGAGGAACTTGGGAAAG+AGG 0.481479 7_4:+39196266 Msa1153040:CDS
ATTCTTGAAAGCTTAAATGT+TGG 0.495372 7_4:+39196600 Msa1153040:CDS
GGAACTTCATTTGAAATACT+AGG 0.506752 7_4:+39195742 Msa1153040:CDS
AGGATGAAAGAAAGCGAAAA+GGG 0.514516 7_4:+39196489 Msa1153040:CDS
GAGAAGGGAAGAGATAGTTA+AGG 0.514567 7_4:+39196761 Msa1153040:CDS
AACTTGGGAAAGAGGAAGAA+TGG 0.515439 7_4:+39196274 Msa1153040:CDS
GCTCAAGTTGGTCTCCCTGA+TGG 0.517552 7_4:+39195700 Msa1153040:CDS
GAGCATGAGGAAACCTAGTA+AGG 0.520576 7_4:-39196353 None:intergenic
GGTTCAAAATAGGCAGCGGC+AGG 0.521370 7_4:-39196072 None:intergenic
TAACATTAATGCAGAGAAAG+TGG 0.527249 7_4:+39196737 Msa1153040:CDS
AGGATGAGAGCAAAGAAACT+TGG 0.527542 7_4:+39196828 Msa1153040:CDS
TTGGAGCATCATTGTTGCGC+GGG 0.530137 7_4:-39195773 None:intergenic
GGTGTTGAAAACATGAAAGA+TGG 0.536842 7_4:+39195721 Msa1153040:CDS
GGGAGACCAACTTGAGCTGA+AGG 0.537026 7_4:-39195694 None:intergenic
TGACAATACAATCAGGTTGA+AGG 0.541367 7_4:-39195822 None:intergenic
AAGGATGAAAGAAAGCGAAA+AGG 0.542239 7_4:+39196488 Msa1153040:CDS
GCAGCTGCTTGCACAGTCCA+CGG 0.557877 7_4:-39195859 None:intergenic
GGGATCAAATCTTGGAGTGT+AGG 0.562776 7_4:+39196189 Msa1153040:CDS
TCCTGCAAGAATTTGAGGAA+AGG 0.563287 7_4:+39196469 Msa1153040:CDS
ACCAAGAGAGCAAAGAAATG+AGG 0.564369 7_4:+39196808 Msa1153040:CDS
TCAATTGTATGAGGCAAACC+AGG 0.565982 7_4:-39196006 None:intergenic
GGATTGTTACTCACTGTGGT+TGG 0.567599 7_4:+39196571 Msa1153040:CDS
TTTGCCAATGATCACGTGGC+CGG 0.570301 7_4:+39196623 Msa1153040:CDS
GATAAAGATGAAGATGGAGA+AGG 0.574343 7_4:+39196444 Msa1153040:CDS
TTGAAGAAATCTAAGGCACT+TGG 0.574510 7_4:+39196930 Msa1153040:CDS
GGAGTCATCTCAATTGTATG+AGG 0.575171 7_4:-39196015 None:intergenic
GGAATCATATGACCAGGAGT+TGG 0.577315 7_4:-39195526 None:intergenic
CAGCTTGTAGAAATTGCGCA+CGG 0.578586 7_4:+39196375 Msa1153040:CDS
GTGTAGGACCAGTTTCAGCT+TGG 0.580002 7_4:+39196205 Msa1153040:CDS
AAAACTTAGTAACACTACAA+TGG 0.581796 7_4:+39196167 Msa1153040:CDS
ATACTTCATCATAAAATGGA+AGG 0.584363 7_4:-39195938 None:intergenic
GGGGACACATAGAGGAACTT+GGG 0.587001 7_4:+39196259 Msa1153040:CDS
ATCATTGGAATCATATGACC+AGG 0.588480 7_4:-39195532 None:intergenic
ATATCAGTGACAATACAATC+AGG 0.597518 7_4:-39195829 None:intergenic
GCAAGACTATTTGCCAAACA+TGG 0.600388 7_4:+39195562 Msa1153040:CDS
TGCTGCCAAGAGGACTATAG+AGG 0.613396 7_4:+39196854 Msa1153040:CDS
TAACAATCCCTCCTGTTGCA+GGG 0.613902 7_4:-39196557 None:intergenic
TTGGATCACCCTGCAACAGG+AGG 0.614014 7_4:+39196549 Msa1153040:CDS
TTTGGAGCATCATTGTTGCG+CGG 0.614529 7_4:-39195774 None:intergenic
GGAGACCAACTTGAGCTGAA+GGG 0.621494 7_4:-39195693 None:intergenic
AGCTTGTAGAAATTGCGCAC+GGG 0.622527 7_4:+39196376 Msa1153040:CDS
CATTGGTTCAAAATAGGCAG+CGG 0.628450 7_4:-39196076 None:intergenic
ATTTCTACAAGCTGAGCATG+AGG 0.628793 7_4:-39196366 None:intergenic
GCCAAGAGGACTATAGAGGA+AGG 0.631460 7_4:+39196858 Msa1153040:CDS
TTGAAGATAGGGGTCCCTGT+AGG 0.633681 7_4:+39196690 Msa1153040:CDS
TAAAATTGCTCAGCAAACAC+CGG 0.633866 7_4:-39196642 None:intergenic
GCGCACGGGCTTGAAAACTC+AGG 0.643236 7_4:+39196390 Msa1153040:CDS
TCAGAAACTAAATTATCATG+AGG 0.644747 7_4:-39195964 None:intergenic
AAGAGGACTATAGAGGAAGG+TGG 0.653780 7_4:+39196861 Msa1153040:CDS
TGGATCACCCTGCAACAGGA+GGG 0.653891 7_4:+39196550 Msa1153040:CDS
TGATCCAATATCAGAAGCTG+CGG 0.656928 7_4:-39196534 None:intergenic
AGTTTCAGCTTGGATCAACA+AGG 0.664222 7_4:+39196215 Msa1153040:CDS
TCACTGATATGTCGTATCCG+TGG 0.667547 7_4:+39195842 Msa1153040:CDS
AACTTGGTGATGCTGCCAAG+AGG 0.668809 7_4:+39196844 Msa1153040:CDS
AACCAATCAGGAATTTGCAG+AGG 0.672958 7_4:-39196036 None:intergenic
TTGGTTTGCCAATGATCACG+TGG 0.708389 7_4:+39196619 Msa1153040:CDS
GGAGGGATTGTTACTCACTG+TGG 0.708859 7_4:+39196567 Msa1153040:CDS
AACTTAGTAACACTACAATG+GGG 0.776141 7_4:+39196169 Msa1153040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGATAAAGATGAAGA+TGG + chr7_4:39196438-39196457 Msa1153040:CDS 20.0%
!! GAGCAAAAGAAAATAATTTA+TGG + chr7_4:39196712-39196731 Msa1153040:CDS 20.0%
!! AAAAATGATAAAGATGAAGA+TGG + chr7_4:39196438-39196457 Msa1153040:CDS 20.0%
!! GAGCAAAAGAAAATAATTTA+TGG + chr7_4:39196712-39196731 Msa1153040:CDS 20.0%
!! ACAGAATATCAATTGGATTT+TGG - chr7_4:39195795-39195814 None:intergenic 25.0%
! TCTTGAAACAGAATATCAAT+TGG - chr7_4:39195802-39195821 None:intergenic 25.0%
! ATACTTCATCATAAAATGGA+AGG - chr7_4:39195941-39195960 None:intergenic 25.0%
! GTCTATACTTCATCATAAAA+TGG - chr7_4:39195945-39195964 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_4:39195967-39195986 None:intergenic 25.0%
!!! TTCAAACATTGGTTCAAAAT+AGG - chr7_4:39196085-39196104 None:intergenic 25.0%
! AAAACTTAGTAACACTACAA+TGG + chr7_4:39196167-39196186 Msa1153040:CDS 25.0%
! AAACTTAGTAACACTACAAT+GGG + chr7_4:39196168-39196187 Msa1153040:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_4:39196327-39196346 Msa1153040:CDS 25.0%
! ATTCTTGAAAGCTTAAATGT+TGG + chr7_4:39196600-39196619 Msa1153040:CDS 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + chr7_4:39196679-39196698 Msa1153040:CDS 25.0%
! GAAATCATTGAAGAAATCTA+AGG + chr7_4:39196923-39196942 Msa1153040:CDS 25.0%
!! ACAGAATATCAATTGGATTT+TGG - chr7_4:39195795-39195814 None:intergenic 25.0%
! TCTTGAAACAGAATATCAAT+TGG - chr7_4:39195802-39195821 None:intergenic 25.0%
! ATACTTCATCATAAAATGGA+AGG - chr7_4:39195941-39195960 None:intergenic 25.0%
! GTCTATACTTCATCATAAAA+TGG - chr7_4:39195945-39195964 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_4:39195967-39195986 None:intergenic 25.0%
!!! TTCAAACATTGGTTCAAAAT+AGG - chr7_4:39196085-39196104 None:intergenic 25.0%
! AAAACTTAGTAACACTACAA+TGG + chr7_4:39196167-39196186 Msa1153040:CDS 25.0%
! AAACTTAGTAACACTACAAT+GGG + chr7_4:39196168-39196187 Msa1153040:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_4:39196327-39196346 Msa1153040:CDS 25.0%
! ATTCTTGAAAGCTTAAATGT+TGG + chr7_4:39196600-39196619 Msa1153040:CDS 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + chr7_4:39196679-39196698 Msa1153040:CDS 25.0%
! GAAATCATTGAAGAAATCTA+AGG + chr7_4:39196923-39196942 Msa1153040:CDS 25.0%
! AACAACATGAAGTTGGTTAT+GGG - chr7_4:39195494-39195513 None:intergenic 30.0%
! AAACAACATGAAGTTGGTTA+TGG - chr7_4:39195495-39195514 None:intergenic 30.0%
GAAGAAAAACAACATGAAGT+TGG - chr7_4:39195501-39195520 None:intergenic 30.0%
AGTAACATTAACACCATGTT+TGG - chr7_4:39195578-39195597 None:intergenic 30.0%
!!! TATGGATTTTTGGAATGTTG+AGG - chr7_4:39195623-39195642 None:intergenic 30.0%
! GGAACTTCATTTGAAATACT+AGG + chr7_4:39195742-39195761 Msa1153040:CDS 30.0%
ATATCAGTGACAATACAATC+AGG - chr7_4:39195832-39195851 None:intergenic 30.0%
GAGCTGTAATAATGAATTCT+CGG - chr7_4:39195898-39195917 None:intergenic 30.0%
ACACAGAAATTTACAATTCC+TGG + chr7_4:39195988-39196007 Msa1153040:CDS 30.0%
! CTTTTCTCTGATTCAAACAT+TGG - chr7_4:39196096-39196115 None:intergenic 30.0%
GAATCAGAGAAAAGAAGTTA+TGG + chr7_4:39196102-39196121 Msa1153040:CDS 30.0%
! ATACAACAGTTTTCATGAAC+TGG + chr7_4:39196131-39196150 Msa1153040:CDS 30.0%
AACTTAGTAACACTACAATG+GGG + chr7_4:39196169-39196188 Msa1153040:CDS 30.0%
CAACAAGGATAATGAGAAAA+AGG + chr7_4:39196230-39196249 Msa1153040:CDS 30.0%
ATAATGAGAAAAAGGCCAAT+GGG + chr7_4:39196238-39196257 Msa1153040:CDS 30.0%
! ACTCAGGTCAAAATTTTATC+TGG + chr7_4:39196406-39196425 Msa1153040:CDS 30.0%
! CTCAGGTCAAAATTTTATCT+GGG + chr7_4:39196407-39196426 Msa1153040:CDS 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + chr7_4:39196678-39196697 Msa1153040:CDS 30.0%
!!! TGTTGATGTTTTGAAGATAG+GGG + chr7_4:39196680-39196699 Msa1153040:CDS 30.0%
! TATTTTCTTTTGCTCCTACA+GGG - chr7_4:39196707-39196726 None:intergenic 30.0%
! TTATTTTCTTTTGCTCCTAC+AGG - chr7_4:39196708-39196727 None:intergenic 30.0%
TAACATTAATGCAGAGAAAG+TGG + chr7_4:39196737-39196756 Msa1153040:CDS 30.0%
! TAAGGCTGTAAAGATTTTGA+TGG + chr7_4:39196779-39196798 Msa1153040:CDS 30.0%
!! AAGGCTGTAAAGATTTTGAT+GGG + chr7_4:39196780-39196799 Msa1153040:CDS 30.0%
! AACAACATGAAGTTGGTTAT+GGG - chr7_4:39195494-39195513 None:intergenic 30.0%
! AAACAACATGAAGTTGGTTA+TGG - chr7_4:39195495-39195514 None:intergenic 30.0%
GAAGAAAAACAACATGAAGT+TGG - chr7_4:39195501-39195520 None:intergenic 30.0%
AGTAACATTAACACCATGTT+TGG - chr7_4:39195578-39195597 None:intergenic 30.0%
!!! TATGGATTTTTGGAATGTTG+AGG - chr7_4:39195623-39195642 None:intergenic 30.0%
! GGAACTTCATTTGAAATACT+AGG + chr7_4:39195742-39195761 Msa1153040:CDS 30.0%
ATATCAGTGACAATACAATC+AGG - chr7_4:39195832-39195851 None:intergenic 30.0%
GAGCTGTAATAATGAATTCT+CGG - chr7_4:39195898-39195917 None:intergenic 30.0%
ACACAGAAATTTACAATTCC+TGG + chr7_4:39195988-39196007 Msa1153040:CDS 30.0%
! CTTTTCTCTGATTCAAACAT+TGG - chr7_4:39196096-39196115 None:intergenic 30.0%
GAATCAGAGAAAAGAAGTTA+TGG + chr7_4:39196102-39196121 Msa1153040:CDS 30.0%
! ATACAACAGTTTTCATGAAC+TGG + chr7_4:39196131-39196150 Msa1153040:CDS 30.0%
AACTTAGTAACACTACAATG+GGG + chr7_4:39196169-39196188 Msa1153040:CDS 30.0%
CAACAAGGATAATGAGAAAA+AGG + chr7_4:39196230-39196249 Msa1153040:CDS 30.0%
ATAATGAGAAAAAGGCCAAT+GGG + chr7_4:39196238-39196257 Msa1153040:CDS 30.0%
! ACTCAGGTCAAAATTTTATC+TGG + chr7_4:39196406-39196425 Msa1153040:CDS 30.0%
! CTCAGGTCAAAATTTTATCT+GGG + chr7_4:39196407-39196426 Msa1153040:CDS 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + chr7_4:39196678-39196697 Msa1153040:CDS 30.0%
!!! TGTTGATGTTTTGAAGATAG+GGG + chr7_4:39196680-39196699 Msa1153040:CDS 30.0%
! TATTTTCTTTTGCTCCTACA+GGG - chr7_4:39196707-39196726 None:intergenic 30.0%
! TTATTTTCTTTTGCTCCTAC+AGG - chr7_4:39196708-39196727 None:intergenic 30.0%
TAACATTAATGCAGAGAAAG+TGG + chr7_4:39196737-39196756 Msa1153040:CDS 30.0%
! TAAGGCTGTAAAGATTTTGA+TGG + chr7_4:39196779-39196798 Msa1153040:CDS 30.0%
!! AAGGCTGTAAAGATTTTGAT+GGG + chr7_4:39196780-39196799 Msa1153040:CDS 30.0%
ATCATTGGAATCATATGACC+AGG - chr7_4:39195535-39195554 None:intergenic 35.0%
!!! TTTTTGGAATGTTGAGGCAT+TGG - chr7_4:39195617-39195636 None:intergenic 35.0%
! TGTCACTGTCTATGGATTTT+TGG - chr7_4:39195633-39195652 None:intergenic 35.0%
TAAACTGATGTCACTGTCTA+TGG - chr7_4:39195641-39195660 None:intergenic 35.0%
ATAGACAGTGACATCAGTTT+AGG + chr7_4:39195640-39195659 Msa1153040:CDS 35.0%
CCATCAAAACTCAACTTCTT+CGG + chr7_4:39195668-39195687 Msa1153040:CDS 35.0%
! TCATGTTTTCAACACCATCA+GGG - chr7_4:39195717-39195736 None:intergenic 35.0%
! TTCATGTTTTCAACACCATC+AGG - chr7_4:39195718-39195737 None:intergenic 35.0%
! GGTGTTGAAAACATGAAAGA+TGG + chr7_4:39195721-39195740 Msa1153040:CDS 35.0%
!! TGACAATACAATCAGGTTGA+AGG - chr7_4:39195825-39195844 None:intergenic 35.0%
TTCTTTGTATGCAACCAATC+AGG - chr7_4:39196051-39196070 None:intergenic 35.0%
GATAATGAGAAAAAGGCCAA+TGG + chr7_4:39196237-39196256 Msa1153040:CDS 35.0%
TAATGAGAAAAAGGCCAATG+GGG + chr7_4:39196239-39196258 Msa1153040:CDS 35.0%
AAGAGGAAGAATGGCTAAAT+TGG + chr7_4:39196283-39196302 Msa1153040:CDS 35.0%
GATAAAGATGAAGATGGAGA+AGG + chr7_4:39196444-39196463 Msa1153040:CDS 35.0%
AAGGATGAAAGAAAGCGAAA+AGG + chr7_4:39196488-39196507 Msa1153040:CDS 35.0%
AGGATGAAAGAAAGCGAAAA+GGG + chr7_4:39196489-39196508 Msa1153040:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_4:39196508-39196527 Msa1153040:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_4:39196509-39196528 Msa1153040:CDS 35.0%
TAAAATTGCTCAGCAAACAC+CGG - chr7_4:39196645-39196664 None:intergenic 35.0%
! TTGAAGAAATCTAAGGCACT+TGG + chr7_4:39196930-39196949 Msa1153040:CDS 35.0%
ATCATTGGAATCATATGACC+AGG - chr7_4:39195535-39195554 None:intergenic 35.0%
!!! TTTTTGGAATGTTGAGGCAT+TGG - chr7_4:39195617-39195636 None:intergenic 35.0%
! TGTCACTGTCTATGGATTTT+TGG - chr7_4:39195633-39195652 None:intergenic 35.0%
TAAACTGATGTCACTGTCTA+TGG - chr7_4:39195641-39195660 None:intergenic 35.0%
ATAGACAGTGACATCAGTTT+AGG + chr7_4:39195640-39195659 Msa1153040:CDS 35.0%
CCATCAAAACTCAACTTCTT+CGG + chr7_4:39195668-39195687 Msa1153040:CDS 35.0%
! TCATGTTTTCAACACCATCA+GGG - chr7_4:39195717-39195736 None:intergenic 35.0%
! TTCATGTTTTCAACACCATC+AGG - chr7_4:39195718-39195737 None:intergenic 35.0%
! GGTGTTGAAAACATGAAAGA+TGG + chr7_4:39195721-39195740 Msa1153040:CDS 35.0%
!! TGACAATACAATCAGGTTGA+AGG - chr7_4:39195825-39195844 None:intergenic 35.0%
TTCTTTGTATGCAACCAATC+AGG - chr7_4:39196051-39196070 None:intergenic 35.0%
GATAATGAGAAAAAGGCCAA+TGG + chr7_4:39196237-39196256 Msa1153040:CDS 35.0%
TAATGAGAAAAAGGCCAATG+GGG + chr7_4:39196239-39196258 Msa1153040:CDS 35.0%
AAGAGGAAGAATGGCTAAAT+TGG + chr7_4:39196283-39196302 Msa1153040:CDS 35.0%
GATAAAGATGAAGATGGAGA+AGG + chr7_4:39196444-39196463 Msa1153040:CDS 35.0%
AAGGATGAAAGAAAGCGAAA+AGG + chr7_4:39196488-39196507 Msa1153040:CDS 35.0%
AGGATGAAAGAAAGCGAAAA+GGG + chr7_4:39196489-39196508 Msa1153040:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_4:39196508-39196527 Msa1153040:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_4:39196509-39196528 Msa1153040:CDS 35.0%
TAAAATTGCTCAGCAAACAC+CGG - chr7_4:39196645-39196664 None:intergenic 35.0%
! TTGAAGAAATCTAAGGCACT+TGG + chr7_4:39196930-39196949 Msa1153040:CDS 35.0%
TTTCTTCCATTTCCAACTCC+TGG + chr7_4:39195514-39195533 Msa1153040:CDS 40.0%
ATATGACCAGGAGTTGGAAA+TGG - chr7_4:39195523-39195542 None:intergenic 40.0%
! AGTCTTGCTGTCTCTATCAT+TGG - chr7_4:39195550-39195569 None:intergenic 40.0%
GCAAGACTATTTGCCAAACA+TGG + chr7_4:39195562-39195581 Msa1153040:CDS 40.0%
!! CCGAAGAAGTTGAGTTTTGA+TGG - chr7_4:39195671-39195690 None:intergenic 40.0%
! CATAAAATGGAAGGCACAGT+TGG - chr7_4:39195932-39195951 None:intergenic 40.0%
TCAATTGTATGAGGCAAACC+AGG - chr7_4:39196009-39196028 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_4:39196018-39196037 None:intergenic 40.0%
AACCAATCAGGAATTTGCAG+AGG - chr7_4:39196039-39196058 None:intergenic 40.0%
!! CATTGGTTCAAAATAGGCAG+CGG - chr7_4:39196079-39196098 None:intergenic 40.0%
CTACAATGGGGATCAAATCT+TGG + chr7_4:39196181-39196200 Msa1153040:CDS 40.0%
TTGTTGATCCAAGCTGAAAC+TGG - chr7_4:39196216-39196235 None:intergenic 40.0%
AGTTTCAGCTTGGATCAACA+AGG + chr7_4:39196215-39196234 Msa1153040:CDS 40.0%
AATGAGAAAAAGGCCAATGG+GGG + chr7_4:39196240-39196259 Msa1153040:CDS 40.0%
AACTTGGGAAAGAGGAAGAA+TGG + chr7_4:39196274-39196293 Msa1153040:CDS 40.0%
!!! TATGTTTTGGCAGCCTTACT+AGG + chr7_4:39196340-39196359 Msa1153040:CDS 40.0%
ATTTCTACAAGCTGAGCATG+AGG - chr7_4:39196369-39196388 None:intergenic 40.0%
AGGTTTCCTGCAAGAATTTG+AGG + chr7_4:39196464-39196483 Msa1153040:CDS 40.0%
TCCTGCAAGAATTTGAGGAA+AGG + chr7_4:39196469-39196488 Msa1153040:CDS 40.0%
TCCTTTCCTCAAATTCTTGC+AGG - chr7_4:39196473-39196492 None:intergenic 40.0%
GCGAAAAGGGCTATATCATA+TGG + chr7_4:39196502-39196521 Msa1153040:CDS 40.0%
TGATCCAATATCAGAAGCTG+CGG - chr7_4:39196537-39196556 None:intergenic 40.0%
GAGAAGGGAAGAGATAGTTA+AGG + chr7_4:39196761-39196780 Msa1153040:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_4:39196808-39196827 Msa1153040:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_4:39196812-39196831 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_4:39196828-39196847 Msa1153040:CDS 40.0%
TTTCTTCCATTTCCAACTCC+TGG + chr7_4:39195514-39195533 Msa1153040:CDS 40.0%
ATATGACCAGGAGTTGGAAA+TGG - chr7_4:39195523-39195542 None:intergenic 40.0%
! AGTCTTGCTGTCTCTATCAT+TGG - chr7_4:39195550-39195569 None:intergenic 40.0%
GCAAGACTATTTGCCAAACA+TGG + chr7_4:39195562-39195581 Msa1153040:CDS 40.0%
!! CCGAAGAAGTTGAGTTTTGA+TGG - chr7_4:39195671-39195690 None:intergenic 40.0%
! CATAAAATGGAAGGCACAGT+TGG - chr7_4:39195932-39195951 None:intergenic 40.0%
TCAATTGTATGAGGCAAACC+AGG - chr7_4:39196009-39196028 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_4:39196018-39196037 None:intergenic 40.0%
AACCAATCAGGAATTTGCAG+AGG - chr7_4:39196039-39196058 None:intergenic 40.0%
!! CATTGGTTCAAAATAGGCAG+CGG - chr7_4:39196079-39196098 None:intergenic 40.0%
CTACAATGGGGATCAAATCT+TGG + chr7_4:39196181-39196200 Msa1153040:CDS 40.0%
TTGTTGATCCAAGCTGAAAC+TGG - chr7_4:39196216-39196235 None:intergenic 40.0%
AGTTTCAGCTTGGATCAACA+AGG + chr7_4:39196215-39196234 Msa1153040:CDS 40.0%
AATGAGAAAAAGGCCAATGG+GGG + chr7_4:39196240-39196259 Msa1153040:CDS 40.0%
AACTTGGGAAAGAGGAAGAA+TGG + chr7_4:39196274-39196293 Msa1153040:CDS 40.0%
!!! TATGTTTTGGCAGCCTTACT+AGG + chr7_4:39196340-39196359 Msa1153040:CDS 40.0%
ATTTCTACAAGCTGAGCATG+AGG - chr7_4:39196369-39196388 None:intergenic 40.0%
AGGTTTCCTGCAAGAATTTG+AGG + chr7_4:39196464-39196483 Msa1153040:CDS 40.0%
TCCTGCAAGAATTTGAGGAA+AGG + chr7_4:39196469-39196488 Msa1153040:CDS 40.0%
TCCTTTCCTCAAATTCTTGC+AGG - chr7_4:39196473-39196492 None:intergenic 40.0%
GCGAAAAGGGCTATATCATA+TGG + chr7_4:39196502-39196521 Msa1153040:CDS 40.0%
TGATCCAATATCAGAAGCTG+CGG - chr7_4:39196537-39196556 None:intergenic 40.0%
GAGAAGGGAAGAGATAGTTA+AGG + chr7_4:39196761-39196780 Msa1153040:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_4:39196808-39196827 Msa1153040:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_4:39196812-39196831 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_4:39196828-39196847 Msa1153040:CDS 40.0%
GGAATCATATGACCAGGAGT+TGG - chr7_4:39195529-39195548 None:intergenic 45.0%
! TTTGGAGCATCATTGTTGCG+CGG - chr7_4:39195777-39195796 None:intergenic 45.0%
TCACTGATATGTCGTATCCG+TGG + chr7_4:39195842-39195861 Msa1153040:CDS 45.0%
GTGCAAGCAGCTGCAAAATT+AGG + chr7_4:39195868-39195887 Msa1153040:CDS 45.0%
CTCCTCTGCAAATTCCTGAT+TGG + chr7_4:39196034-39196053 Msa1153040:CDS 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_4:39196189-39196208 Msa1153040:CDS 45.0%
CATAGAGGAACTTGGGAAAG+AGG + chr7_4:39196266-39196285 Msa1153040:CDS 45.0%
GAGCATGAGGAAACCTAGTA+AGG - chr7_4:39196356-39196375 None:intergenic 45.0%
CAGCTTGTAGAAATTGCGCA+CGG + chr7_4:39196375-39196394 Msa1153040:CDS 45.0%
AGCTTGTAGAAATTGCGCAC+GGG + chr7_4:39196376-39196395 Msa1153040:CDS 45.0%
ATATTGGATCACCCTGCAAC+AGG + chr7_4:39196546-39196565 Msa1153040:CDS 45.0%
TAACAATCCCTCCTGTTGCA+GGG - chr7_4:39196560-39196579 None:intergenic 45.0%
GGATTGTTACTCACTGTGGT+TGG + chr7_4:39196571-39196590 Msa1153040:CDS 45.0%
!! TTGGTTTGCCAATGATCACG+TGG + chr7_4:39196619-39196638 Msa1153040:CDS 45.0%
ATGCAGAGAAAGTGGTGAGA+AGG + chr7_4:39196745-39196764 Msa1153040:CDS 45.0%
TGCAGAGAAAGTGGTGAGAA+GGG + chr7_4:39196746-39196765 Msa1153040:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_4:39196862-39196881 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_4:39196861-39196880 Msa1153040:CDS 45.0%
GGAATCATATGACCAGGAGT+TGG - chr7_4:39195529-39195548 None:intergenic 45.0%
! TTTGGAGCATCATTGTTGCG+CGG - chr7_4:39195777-39195796 None:intergenic 45.0%
TCACTGATATGTCGTATCCG+TGG + chr7_4:39195842-39195861 Msa1153040:CDS 45.0%
GTGCAAGCAGCTGCAAAATT+AGG + chr7_4:39195868-39195887 Msa1153040:CDS 45.0%
CTCCTCTGCAAATTCCTGAT+TGG + chr7_4:39196034-39196053 Msa1153040:CDS 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_4:39196189-39196208 Msa1153040:CDS 45.0%
CATAGAGGAACTTGGGAAAG+AGG + chr7_4:39196266-39196285 Msa1153040:CDS 45.0%
GAGCATGAGGAAACCTAGTA+AGG - chr7_4:39196356-39196375 None:intergenic 45.0%
CAGCTTGTAGAAATTGCGCA+CGG + chr7_4:39196375-39196394 Msa1153040:CDS 45.0%
AGCTTGTAGAAATTGCGCAC+GGG + chr7_4:39196376-39196395 Msa1153040:CDS 45.0%
ATATTGGATCACCCTGCAAC+AGG + chr7_4:39196546-39196565 Msa1153040:CDS 45.0%
TAACAATCCCTCCTGTTGCA+GGG - chr7_4:39196560-39196579 None:intergenic 45.0%
GGATTGTTACTCACTGTGGT+TGG + chr7_4:39196571-39196590 Msa1153040:CDS 45.0%
!! TTGGTTTGCCAATGATCACG+TGG + chr7_4:39196619-39196638 Msa1153040:CDS 45.0%
ATGCAGAGAAAGTGGTGAGA+AGG + chr7_4:39196745-39196764 Msa1153040:CDS 45.0%
TGCAGAGAAAGTGGTGAGAA+GGG + chr7_4:39196746-39196765 Msa1153040:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_4:39196862-39196881 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_4:39196861-39196880 Msa1153040:CDS 45.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_4:39195696-39195715 None:intergenic 50.0%
! TTGGAGCATCATTGTTGCGC+GGG - chr7_4:39195776-39195795 None:intergenic 50.0%
! GGAAGGCACAGTTGGAGAAT+TGG - chr7_4:39195924-39195943 None:intergenic 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_4:39196205-39196224 Msa1153040:CDS 50.0%
TTCCTCTATGTGTCCCCCAT+TGG - chr7_4:39196256-39196275 None:intergenic 50.0%
GGGGACACATAGAGGAACTT+GGG + chr7_4:39196259-39196278 Msa1153040:CDS 50.0%
GTAACAATCCCTCCTGTTGC+AGG - chr7_4:39196561-39196580 None:intergenic 50.0%
GGAGGGATTGTTACTCACTG+TGG + chr7_4:39196567-39196586 Msa1153040:CDS 50.0%
TTTGCCAATGATCACGTGGC+CGG + chr7_4:39196623-39196642 Msa1153040:CDS 50.0%
TTGAAGATAGGGGTCCCTGT+AGG + chr7_4:39196690-39196709 Msa1153040:CDS 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_4:39196844-39196863 Msa1153040:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_4:39196854-39196873 Msa1153040:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_4:39196858-39196877 Msa1153040:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_4:39195696-39195715 None:intergenic 50.0%
! TTGGAGCATCATTGTTGCGC+GGG - chr7_4:39195776-39195795 None:intergenic 50.0%
! GGAAGGCACAGTTGGAGAAT+TGG - chr7_4:39195924-39195943 None:intergenic 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_4:39196205-39196224 Msa1153040:CDS 50.0%
TTCCTCTATGTGTCCCCCAT+TGG - chr7_4:39196256-39196275 None:intergenic 50.0%
GGGGACACATAGAGGAACTT+GGG + chr7_4:39196259-39196278 Msa1153040:CDS 50.0%
GTAACAATCCCTCCTGTTGC+AGG - chr7_4:39196561-39196580 None:intergenic 50.0%
GGAGGGATTGTTACTCACTG+TGG + chr7_4:39196567-39196586 Msa1153040:CDS 50.0%
TTTGCCAATGATCACGTGGC+CGG + chr7_4:39196623-39196642 Msa1153040:CDS 50.0%
TTGAAGATAGGGGTCCCTGT+AGG + chr7_4:39196690-39196709 Msa1153040:CDS 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_4:39196844-39196863 Msa1153040:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_4:39196854-39196873 Msa1153040:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_4:39196858-39196877 Msa1153040:CDS 50.0%
CGGTTCCCTTCAGCTCAAGT+TGG + chr7_4:39195688-39195707 Msa1153040:CDS 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_4:39195697-39195716 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+TGG + chr7_4:39195700-39195719 Msa1153040:CDS 55.0%
GGTTCAAAATAGGCAGCGGC+AGG - chr7_4:39196075-39196094 None:intergenic 55.0%
GGGGGACACATAGAGGAACT+TGG + chr7_4:39196258-39196277 Msa1153040:CDS 55.0%
GGCACCGCAGCTTCTGATAT+TGG + chr7_4:39196530-39196549 Msa1153040:CDS 55.0%
TTGGATCACCCTGCAACAGG+AGG + chr7_4:39196549-39196568 Msa1153040:CDS 55.0%
TGGATCACCCTGCAACAGGA+GGG + chr7_4:39196550-39196569 Msa1153040:CDS 55.0%
AACACCGGCCACGTGATCAT+TGG - chr7_4:39196630-39196649 None:intergenic 55.0%
CGGTTCCCTTCAGCTCAAGT+TGG + chr7_4:39195688-39195707 Msa1153040:CDS 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_4:39195697-39195716 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+TGG + chr7_4:39195700-39195719 Msa1153040:CDS 55.0%
GGTTCAAAATAGGCAGCGGC+AGG - chr7_4:39196075-39196094 None:intergenic 55.0%
GGGGGACACATAGAGGAACT+TGG + chr7_4:39196258-39196277 Msa1153040:CDS 55.0%
GGCACCGCAGCTTCTGATAT+TGG + chr7_4:39196530-39196549 Msa1153040:CDS 55.0%
TTGGATCACCCTGCAACAGG+AGG + chr7_4:39196549-39196568 Msa1153040:CDS 55.0%
TGGATCACCCTGCAACAGGA+GGG + chr7_4:39196550-39196569 Msa1153040:CDS 55.0%
AACACCGGCCACGTGATCAT+TGG - chr7_4:39196630-39196649 None:intergenic 55.0%
GCAGCTGCTTGCACAGTCCA+CGG - chr7_4:39195862-39195881 None:intergenic 60.0%
GGCCAATGGGGGACACATAG+AGG + chr7_4:39196251-39196270 Msa1153040:CDS 60.0%
GCGCACGGGCTTGAAAACTC+AGG + chr7_4:39196390-39196409 Msa1153040:CDS 60.0%
GCAGCTGCTTGCACAGTCCA+CGG - chr7_4:39195862-39195881 None:intergenic 60.0%
GGCCAATGGGGGACACATAG+AGG + chr7_4:39196251-39196270 Msa1153040:CDS 60.0%
GCGCACGGGCTTGAAAACTC+AGG + chr7_4:39196390-39196409 Msa1153040:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 39195475 39196968 39195475 ID=Msa1153040;Name=Msa1153040
chr7_4 mRNA 39195475 39196968 39195475 ID=Msa1153040-mRNA-1;Parent=Msa1153040;Name=Msa1153040-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|497
chr7_4 exon 39195475 39196968 39195475 ID=Msa1153040-mRNA-1:exon:9513;Parent=Msa1153040-mRNA-1
chr7_4 CDS 39195475 39196968 39195475 ID=Msa1153040-mRNA-1:cds;Parent=Msa1153040-mRNA-1
Gene Sequence

>Msa1153040

ATGGAGTCTCAACAATCCCATAACCAACTTCATGTTGTTTTTCTTCCATTTCCAACTCCTGGTCATATGATTCCAATGATAGAGACAGCAAGACTATTTGCCAAACATGGTGTTAATGTTACTATCATCACTACACATGCCAATGCCTCAACATTCCAAAAATCCATAGACAGTGACATCAGTTTAGGATACTCCATCAAAACTCAACTTCTTCGGTTCCCTTCAGCTCAAGTTGGTCTCCCTGATGGTGTTGAAAACATGAAAGATGGAACTTCATTTGAAATACTAGGTAAAATCACCCGCGCAACAATGATGCTCCAAAATCCAATTGATATTCTGTTTCAAGACCTTCAACCTGATTGTATTGTCACTGATATGTCGTATCCGTGGACTGTGCAAGCAGCTGCAAAATTAGGTATTCCGAGAATTCATTATTACAGCTCAAGCCAATTCTCCAACTGTGCCTTCCATTTTATGATGAAGTATAGACCTCATGATAATTTAGTTTCTGATACACAGAAATTTACAATTCCTGGTTTGCCTCATACAATTGAGATGACTCCTCTGCAAATTCCTGATTGGTTGCATACAAAGAATCCTGCCGCTGCCTATTTTGAACCAATGTTTGAATCAGAGAAAAGAAGTTATGGAACACTATACAACAGTTTTCATGAACTGGAAAGTGATTATGAAAAACTTAGTAACACTACAATGGGGATCAAATCTTGGAGTGTAGGACCAGTTTCAGCTTGGATCAACAAGGATAATGAGAAAAAGGCCAATGGGGGACACATAGAGGAACTTGGGAAAGAGGAAGAATGGCTAAATTGGCTTAACTCAAAACAAAATGAGTCTGTATTGTATGTATGTTTTGGCAGCCTTACTAGGTTTCCTCATGCTCAGCTTGTAGAAATTGCGCACGGGCTTGAAAACTCAGGTCAAAATTTTATCTGGGTTGTAAAAAAAAATGATAAAGATGAAGATGGAGAAGGTTTCCTGCAAGAATTTGAGGAAAGGATGAAAGAAAGCGAAAAGGGCTATATCATATGGAATTGGGCACCGCAGCTTCTGATATTGGATCACCCTGCAACAGGAGGGATTGTTACTCACTGTGGTTGGAACTCAATTCTTGAAAGCTTAAATGTTGGTTTGCCAATGATCACGTGGCCGGTGTTTGCTGAGCAATTTTACAATGAGAAGTTGCTTGTTGATGTTTTGAAGATAGGGGTCCCTGTAGGAGCAAAAGAAAATAATTTATGGATTAACATTAATGCAGAGAAAGTGGTGAGAAGGGAAGAGATAGTTAAGGCTGTAAAGATTTTGATGGGAAGTGACCAAGAGAGCAAAGAAATGAGGATGAGAGCAAAGAAACTTGGTGATGCTGCCAAGAGGACTATAGAGGAAGGTGGACACTCTTACAACAACTTGATTCAGTTGATTGATGAGCTGAAATCATTGAAGAAATCTAAGGCACTTGGTGTGAAATCAGATTAG
Protein sequence

>Msa1153040

MESQQSHNQLHVVFLPFPTPGHMIPMIETARLFAKHGVNVTIITTHANASTFQKSIDSDISLGYSIKTQLLRFPSAQVGLPDGVENMKDGTSFEILGKITRATMMLQNPIDILFQDLQPDCIVTDMSYPWTVQAAAKLGIPRIHYYSSSQFSNCAFHFMMKYRPHDNLVSDTQKFTIPGLPHTIEMTPLQIPDWLHTKNPAAAYFEPMFESEKRSYGTLYNSFHELESDYEKLSNTTMGIKSWSVGPVSAWINKDNEKKANGGHIEELGKEEEWLNWLNSKQNESVLYVCFGSLTRFPHAQLVEIAHGLENSGQNFIWVVKKNDKDEDGEGFLQEFEERMKESEKGYIIWNWAPQLLILDHPATGGIVTHCGWNSILESLNVGLPMITWPVFAEQFYNEKLLVDVLKIGVPVGAKENNLWININAEKVVRREEIVKAVKILMGSDQESKEMRMRAKKLGDAAKRTIEEGGHSYNNLIQLIDELKSLKKSKALGVKSD*