AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1155390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155390 MtrunA17_Chr7g0247131 96.169 261 10 0 44 304 9 269 0.0 519
Msa1155390 MtrunA17_Chr8g0349261 70.667 300 80 6 1 296 1 296 1.57e-145 411
Msa1155390 MtrunA17_Chr1g0203411 50.968 310 114 10 1 299 1 283 1.45e-90 271
Msa1155390 MtrunA17_Chr6g0453471 68.824 170 50 2 1 168 1 169 1.37e-79 245
Msa1155390 MtrunA17_Chr7g0217741 68.452 168 51 2 1 168 1 166 1.81e-79 243
Msa1155390 MtrunA17_Chr4g0042671 67.052 173 54 2 1 171 1 172 7.86e-78 243
Msa1155390 MtrunA17_Chr4g0039971 76.744 129 29 1 1 129 2 129 5.25e-72 226
Msa1155390 MtrunA17_Chr3g0115821 57.386 176 69 3 1 171 1 175 1.06e-69 219
Msa1155390 MtrunA17_Chr2g0281071 73.077 130 33 2 1 129 1 129 1.80e-67 214
Msa1155390 MtrunA17_Chr2g0323411 72.868 129 34 1 1 129 1 128 3.92e-66 210
Msa1155390 MtrunA17_Chr5g0434571 72.519 131 35 1 1 131 37 166 9.53e-66 210
Msa1155390 MtrunA17_Chr5g0395281 70.543 129 37 1 1 129 1 128 1.01e-65 208
Msa1155390 MtrunA17_Chr4g0048511 70.769 130 36 2 1 129 1 129 1.57e-65 209
Msa1155390 MtrunA17_Chr3g0110351 70.455 132 38 1 1 132 1 131 4.42e-64 204
Msa1155390 MtrunA17_Chr5g0410961 68.217 129 40 1 1 129 1 128 7.19e-64 204
Msa1155390 MtrunA17_Chr7g0228891 69.231 130 39 1 1 130 1 129 4.60e-63 200
Msa1155390 MtrunA17_Chr4g0057031 70.769 130 37 1 1 130 1 129 6.29e-63 200
Msa1155390 MtrunA17_Chr3g0121241 67.460 126 40 1 5 130 35 159 2.48e-62 199
Msa1155390 MtrunA17_Chr8g0385321 66.165 133 44 1 1 133 1 132 2.71e-62 199
Msa1155390 MtrunA17_Chr1g0187761 73.504 117 30 1 1 117 1 116 4.17e-62 197
Msa1155390 MtrunA17_Chr1g0193371 66.165 133 44 1 1 133 1 132 5.26e-62 201
Msa1155390 MtrunA17_Chr4g0037141 53.254 169 73 2 1 169 1 163 1.67e-61 197
Msa1155390 MtrunA17_Chr3g0131121 60.667 150 54 2 1 146 1 149 1.87e-61 197
Msa1155390 MtrunA17_Chr1g0167661 73.504 117 30 1 1 117 1 116 3.90e-61 194
Msa1155390 MtrunA17_Chr1g0167691 74.359 117 29 1 1 117 1 116 4.25e-61 194
Msa1155390 MtrunA17_Chr7g0261281 72.650 117 31 1 1 117 1 116 1.45e-59 191
Msa1155390 MtrunA17_Chr7g0275911 68.908 119 36 1 1 119 1 118 3.15e-59 190
Msa1155390 MtrunA17_Chr1g0193801 64.662 133 46 1 1 133 1 132 3.38e-59 194
Msa1155390 MtrunA17_Chr7g0270891 64.662 133 46 1 1 133 1 132 3.76e-59 193
Msa1155390 MtrunA17_Chr4g0068061 69.231 117 35 1 1 117 1 116 9.66e-59 191
Msa1155390 MtrunA17_Chr7g0274581 65.254 118 40 1 1 118 1 117 1.05e-58 187
Msa1155390 MtrunA17_Chr4g0058631 54.023 174 77 2 1 174 1 171 1.69e-58 191
Msa1155390 MtrunA17_Chr7g0217221 71.186 118 33 1 1 118 1 117 3.63e-57 185
Msa1155390 MtrunA17_Chr4g0060721 69.231 117 35 1 1 117 2 117 1.38e-56 186
Msa1155390 MtrunA17_Chr6g0452271 59.259 135 54 1 1 135 1 134 2.68e-56 185
Msa1155390 MtrunA17_Chr8g0346561 66.949 118 38 1 1 118 1 117 3.58e-56 183
Msa1155390 MtrunA17_Chr7g0271241 66.412 131 43 1 1 131 1 130 4.51e-56 186
Msa1155390 MtrunA17_Chr3g0092401 68.333 120 37 1 1 120 2 120 5.00e-56 183
Msa1155390 MtrunA17_Chr3g0117091 65.385 130 44 1 1 130 1 129 5.48e-56 184
Msa1155390 MtrunA17_Chr3g0103281 58.519 135 55 1 1 135 1 134 5.59e-56 184
Msa1155390 MtrunA17_Chr5g0435101 50.276 181 76 3 3 182 2 169 7.48e-56 180
Msa1155390 MtrunA17_Chr7g0254411 66.667 126 39 2 1 124 1 125 7.65e-56 184
Msa1155390 MtrunA17_Chr4g0070611 66.667 120 39 1 1 120 1 119 1.95e-55 182
Msa1155390 MtrunA17_Chr1g0194951 65.116 129 44 1 1 129 1 128 2.09e-55 184
Msa1155390 MtrunA17_Chr4g0070641 66.667 120 39 1 1 120 1 119 4.65e-55 176
Msa1155390 MtrunA17_Chr2g0309911 62.121 132 47 2 6 137 5 133 6.17e-55 181
Msa1155390 MtrunA17_Chr1g0211161 64.844 128 44 1 3 130 4 130 7.77e-55 177
Msa1155390 MtrunA17_Chr5g0417821 55.556 153 62 2 11 163 6 152 1.07e-54 179
Msa1155390 MtrunA17_Chr2g0330041 62.698 126 46 1 1 126 1 125 1.59e-53 179
Msa1155390 MtrunA17_Chr6g0453211 68.750 112 34 1 1 112 1 111 9.04e-53 175
Msa1155390 MtrunA17_Chr7g0269831 69.167 120 36 1 1 120 1 119 2.41e-51 172
Msa1155390 MtrunA17_Chr4g0022931 64.706 119 40 2 1 118 1 118 3.40e-51 170
Msa1155390 MtrunA17_Chr8g0342521 43.119 218 92 6 1 206 1 198 4.46e-51 172
Msa1155390 MtrunA17_Chr7g0264641 52.740 146 69 0 1 146 1 146 5.76e-51 169
Msa1155390 MtrunA17_Chr1g0151941 59.829 117 47 0 1 117 1 117 5.78e-51 168
Msa1155390 MtrunA17_Chr4g0028311 57.031 128 55 0 1 128 1 128 1.33e-50 170
Msa1155390 MtrunA17_Chr3g0135311 61.538 117 45 0 1 117 1 117 1.33e-50 170
Msa1155390 MtrunA17_Chr5g0400821 61.538 117 45 0 1 117 1 117 1.50e-50 169
Msa1155390 MtrunA17_Chr4g0022901 65.812 117 38 2 1 116 1 116 5.42e-50 167
Msa1155390 MtrunA17_Chr8g0342541 42.009 219 97 7 1 206 1 202 7.19e-50 169
Msa1155390 MtrunA17_Chr4g0044421 61.111 126 47 2 3 127 2 126 8.36e-50 164
Msa1155390 MtrunA17_Chr8g0387421 61.017 118 45 1 1 118 1 117 1.35e-49 167
Msa1155390 MtrunA17_Chr1g0152011 59.829 117 47 0 1 117 1 117 4.25e-49 166
Msa1155390 MtrunA17_Chr2g0327351 63.063 111 41 0 1 111 1 111 7.69e-49 165
Msa1155390 MtrunA17_Chr2g0323351 64.103 117 41 1 1 117 1 116 9.88e-49 162
Msa1155390 MtrunA17_Chr2g0311221 64.865 111 38 1 2 112 4 113 2.36e-48 164
Msa1155390 MtrunA17_Chr5g0397231 63.964 111 39 1 1 111 1 110 3.25e-48 164
Msa1155390 MtrunA17_Chr4g0022911 62.393 117 42 2 1 116 1 116 4.86e-48 162
Msa1155390 MtrunA17_Chr4g0032401 57.252 131 53 2 12 142 17 144 7.14e-48 163
Msa1155390 MtrunA17_Chr8g0342481 59.664 119 48 0 1 119 1 119 1.00e-47 164
Msa1155390 MtrunA17_Chr6g0487491 58.065 124 44 1 1 116 1 124 1.07e-47 160
Msa1155390 MtrunA17_Chr4g0072751 62.162 111 42 0 1 111 1 111 1.72e-47 162
Msa1155390 MtrunA17_Chr4g0022881 46.821 173 68 4 1 150 1 172 3.18e-47 158
Msa1155390 MtrunA17_Chr4g0022891 58.824 119 48 1 1 119 1 118 4.59e-47 158
Msa1155390 MtrunA17_Chr8g0354661 65.741 108 36 1 12 119 37 143 8.56e-47 165
Msa1155390 MtrunA17_Chr2g0328771 63.303 109 39 1 12 120 20 127 3.08e-46 158
Msa1155390 MtrunA17_Chr4g0054391 59.091 110 45 0 1 110 1 110 1.39e-45 156
Msa1155390 MtrunA17_Chr6g0450101 59.016 122 47 2 1 120 1 121 5.67e-45 152
Msa1155390 MtrunA17_Chr3g0088461 63.063 111 40 1 8 118 18 127 7.38e-45 155
Msa1155390 MtrunA17_Chr1g0168661 61.682 107 40 1 13 119 22 127 1.37e-44 152
Msa1155390 MtrunA17_Chr7g0228231 64.486 107 37 1 12 118 14 119 3.30e-44 149
Msa1155390 MtrunA17_Chr1g0154031 61.739 115 42 2 12 125 76 189 3.24e-43 153
Msa1155390 MtrunA17_Chr3g0080861 60.185 108 42 1 12 119 37 143 1.26e-42 153
Msa1155390 MtrunA17_Chr3g0099131 61.682 107 40 1 12 118 41 146 2.27e-42 153
Msa1155390 MtrunA17_Chr1g0209661 57.143 112 47 1 12 123 27 137 3.33e-42 147
Msa1155390 MtrunA17_Chr2g0294811 67.742 93 29 1 1 93 1 92 4.10e-42 141
Msa1155390 MtrunA17_Chr1g0186061 58.879 107 43 1 13 119 21 126 6.36e-42 145
Msa1155390 MtrunA17_Chr4g0042611 70.787 89 25 1 1 89 1 88 9.69e-42 139
Msa1155390 MtrunA17_Chr1g0194301 52.893 121 56 1 8 128 29 148 2.79e-41 144
Msa1155390 MtrunA17_Chr2g0322521 62.162 111 41 1 9 119 26 135 4.84e-41 147
Msa1155390 MtrunA17_Chr4g0055981 55.085 118 52 1 9 126 52 168 1.16e-40 141
Msa1155390 MtrunA17_Chr1g0203441 56.780 118 49 2 1 117 1 117 1.57e-40 142
Msa1155390 MtrunA17_Chr6g0470971 53.077 130 59 2 7 135 9 137 2.13e-40 142
Msa1155390 MtrunA17_Chr1g0180391 57.944 107 44 1 12 118 19 124 4.22e-40 140
Msa1155390 MtrunA17_Chr8g0343831 54.237 118 49 2 1 118 1 113 2.23e-39 139
Msa1155390 MtrunA17_Chr1g0194291 55.172 116 51 1 8 123 17 131 3.21e-39 138
Msa1155390 MtrunA17_Chr7g0240821 46.429 140 73 2 17 155 6 144 9.56e-39 136
Msa1155390 MtrunA17_Chr1g0192411 51.562 128 53 3 8 128 8 133 7.17e-37 135
Msa1155390 MtrunA17_Chr5g0434931 52.727 110 51 1 10 119 33 141 8.77e-37 132
Msa1155390 MtrunA17_Chr5g0434911 50.442 113 55 1 7 119 16 127 9.49e-37 132
Msa1155390 MtrunA17_Chr2g0327821 54.286 105 47 1 12 116 6 109 1.16e-36 131
Msa1155390 MtrunA17_Chr4g0030881 54.054 111 43 2 13 116 8 117 1.61e-36 131
Msa1155390 MtrunA17_Chr5g0440781 51.327 113 52 3 13 124 13 123 4.04e-36 128
Msa1155390 MtrunA17_Chr7g0220341 41.520 171 78 5 11 179 24 174 7.72e-36 130
Msa1155390 MtrunA17_Chr5g0434831 52.778 108 50 1 10 117 5 111 1.04e-35 127
Msa1155390 MtrunA17_Chr5g0440761 51.327 113 52 3 13 124 13 123 2.38e-35 128
Msa1155390 MtrunA17_Chr5g0441141 51.327 113 52 3 13 124 13 123 2.62e-35 128
Msa1155390 MtrunA17_Chr2g0293911 56.034 116 50 1 8 123 20 134 3.67e-35 129
Msa1155390 MtrunA17_Chr4g0068921 55.172 116 51 1 8 123 20 134 9.31e-35 125
Msa1155390 MtrunA17_Chr7g0228991 51.818 110 52 1 10 119 27 135 2.20e-34 126
Msa1155390 MtrunA17_Chr5g0434841 52.778 108 50 1 10 117 18 124 2.26e-34 127
Msa1155390 MtrunA17_Chr8g0360111 54.369 103 46 1 11 113 24 125 4.40e-34 125
Msa1155390 MtrunA17_Chr5g0441131 52.212 113 51 3 13 124 10 120 7.13e-34 122
Msa1155390 MtrunA17_Chr5g0395221 62.921 89 32 1 1 89 1 88 1.16e-33 118
Msa1155390 MtrunA17_Chr8g0342511 59.091 88 35 1 1 88 1 87 2.22e-33 118
Msa1155390 MtrunA17_Chr8g0342531 54.639 97 43 1 1 97 1 96 6.16e-33 119
Msa1155390 MtrunA17_Chr8g0334881 53.509 114 50 3 8 120 6 117 1.12e-32 122
Msa1155390 MtrunA17_Chr2g0323321 59.140 93 36 2 1 93 1 91 3.16e-32 115
Msa1155390 MtrunA17_Chr8g0342461 55.556 90 40 0 1 90 1 90 3.78e-32 116
Msa1155390 MtrunA17_Chr8g0342471 55.556 90 40 0 1 90 1 90 5.48e-32 115
Msa1155390 MtrunA17_Chr3g0099141 55.682 88 38 1 8 95 36 122 6.02e-31 113
Msa1155390 MtrunA17_Chr3g0093811 55.556 90 40 0 44 133 13 102 2.19e-30 115
Msa1155390 MtrunA17_Chr4g0008551 53.846 104 44 3 14 116 38 138 2.91e-30 117
Msa1155390 MtrunA17_Chr6g0454921 51.351 111 50 3 14 123 15 122 3.83e-30 113
Msa1155390 MtrunA17_Chr4g0013361 47.899 119 57 3 12 129 10 124 7.20e-30 114
Msa1155390 MtrunA17_Chr5g0401731 49.153 118 56 3 14 130 15 129 5.16e-29 113
Msa1155390 MtrunA17_Chr7g0247141 95.833 48 2 0 1 48 1 48 1.82e-28 104
Msa1155390 MtrunA17_Chr3g0133601 50.962 104 47 3 14 116 37 137 7.39e-28 107
Msa1155390 MtrunA17_Chr5g0437321 50.000 108 49 4 8 113 12 116 2.29e-26 105
Msa1155390 MtrunA17_Chr4g0053431 45.455 121 55 4 14 129 5 119 2.39e-26 104
Msa1155390 MtrunA17_Chr7g0229101 60.563 71 28 0 44 114 3 73 3.87e-26 102
Msa1155390 MtrunA17_Chr5g0429661 50.505 99 47 1 12 110 120 216 1.99e-25 103
Msa1155390 MtrunA17_Chr7g0229131 58.333 72 30 0 44 115 3 74 2.08e-25 99.8
Msa1155390 MtrunA17_Chr6g0453751 50.526 95 39 2 10 96 18 112 2.94e-25 98.2
Msa1155390 MtrunA17_Chr6g0480581 41.985 131 68 4 14 139 4 131 2.94e-25 101
Msa1155390 MtrunA17_Chr4g0058991 46.296 108 56 1 9 116 204 309 4.16e-25 104
Msa1155390 MtrunA17_Chr7g0238631 50.909 110 44 3 12 117 111 214 4.44e-25 105
Msa1155390 MtrunA17_Chr3g0139671 47.706 109 53 3 12 119 83 188 1.94e-24 103
Msa1155390 MtrunA17_Chr4g0042621 60.000 90 33 2 85 171 9 98 2.31e-24 100
Msa1155390 MtrunA17_Chr5g0434901 57.746 71 30 0 44 114 4 74 7.98e-24 94.0
Msa1155390 MtrunA17_Chr1g0157731 37.870 169 100 4 12 178 89 254 1.05e-23 101
Msa1155390 MtrunA17_Chr5g0425591 49.412 85 41 2 13 96 10 93 1.58e-23 92.4
Msa1155390 MtrunA17_Chr3g0117511 35.754 179 83 7 3 154 170 343 5.45e-23 98.2
Msa1155390 MtrunA17_Chr7g0228531 48.148 108 48 4 14 119 220 321 1.97e-22 96.7
Msa1155390 MtrunA17_Chr3g0125801 34.807 181 101 5 8 174 10 187 2.79e-21 91.7
Msa1155390 MtrunA17_Chr7g0233061 45.045 111 48 5 14 118 180 283 1.06e-20 90.9
Msa1155390 MtrunA17_Chr6g0460661 40.741 108 60 3 14 120 16 120 1.17e-20 86.7
Msa1155390 MtrunA17_Chr1g0177901 50.000 78 38 1 34 111 13 89 5.94e-20 86.3
Msa1155390 MtrunA17_Chr5g0417621 43.636 110 50 4 14 118 134 236 7.95e-20 89.4
Msa1155390 MtrunA17_Chr5g0397841 47.000 100 49 3 12 110 108 204 1.78e-19 88.2
Msa1155390 MtrunA17_Chr7g0238651 43.269 104 56 2 17 118 10 112 2.27e-19 87.0
Msa1155390 MtrunA17_Chr4g0042501 42.453 106 57 3 14 118 105 207 3.10e-19 87.4
Msa1155390 MtrunA17_Chr7g0228401 57.143 63 27 0 49 111 312 374 2.47e-18 85.1
Msa1155390 MtrunA17_Chr7g0228481 42.478 113 55 4 14 121 220 327 2.54e-18 84.7
Msa1155390 MtrunA17_Chr6g0460671 38.889 108 62 3 14 120 99 203 8.24e-18 82.8
Msa1155390 MtrunA17_Chr5g0416341 42.857 105 52 4 17 118 29 128 4.97e-17 81.3
Msa1155390 MtrunA17_Chr5g0395231 55.932 59 26 0 79 137 5 63 9.32e-17 78.2
Msa1155390 MtrunA17_Chr8g0362231 41.905 105 53 4 17 118 25 124 5.55e-16 77.8
Msa1155390 MtrunA17_Chr1g0193901 56.452 62 25 2 10 70 9 69 6.00e-16 72.8
Msa1155390 MtrunA17_Chr1g0193891 56.452 62 25 2 10 70 9 69 6.00e-16 72.8
Msa1155390 MtrunA17_Chr1g0193871 56.452 62 25 2 10 70 9 69 6.00e-16 72.8
Msa1155390 MtrunA17_Chr1g0193881 56.452 62 25 2 10 70 9 69 6.00e-16 72.8
Msa1155390 MtrunA17_Chr7g0254261 36.975 119 71 3 14 131 89 204 2.85e-15 75.5
Msa1155390 MtrunA17_Chr5g0434871 55.556 45 20 0 75 119 2 46 5.79e-14 65.9
Msa1155390 MtrunA17_Chr3g0145551 53.968 63 20 2 93 155 2 55 2.65e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155390 AT3G61250.1 60.535 299 93 9 1 296 1 277 2.96e-115 335
Msa1155390 AT3G01140.2 66.298 181 55 2 1 176 1 180 1.59e-81 250
Msa1155390 AT3G01140.1 65.730 178 55 2 4 176 47 223 2.57e-78 243
Msa1155390 AT5G15310.4 69.412 170 47 3 1 168 1 167 5.19e-78 238
Msa1155390 AT5G15310.2 69.412 170 47 3 1 168 1 167 7.77e-78 240
Msa1155390 AT5G15310.1 69.412 170 47 3 1 168 1 167 8.75e-78 240
Msa1155390 AT1G34670.1 51.339 224 91 6 1 209 1 221 1.30e-68 218
Msa1155390 AT5G10280.1 53.202 203 68 5 1 181 1 198 7.66e-68 215
Msa1155390 AT3G02940.2 71.318 129 36 1 1 129 1 128 1.33e-67 213
Msa1155390 AT4G21440.1 69.173 133 40 1 1 133 1 132 1.48e-67 214
Msa1155390 AT5G16770.4 71.318 129 36 1 1 129 1 128 1.86e-67 214
Msa1155390 AT5G16770.3 71.318 129 36 1 1 129 1 128 1.86e-67 214
Msa1155390 AT3G02940.1 71.318 129 36 1 1 129 1 128 3.37e-67 213
Msa1155390 AT3G02940.3 71.318 129 36 1 1 129 1 128 3.37e-67 213
Msa1155390 AT5G16770.1 71.318 129 36 1 1 129 1 128 8.07e-67 212
Msa1155390 AT5G16770.2 71.318 129 36 1 1 129 1 128 8.07e-67 212
Msa1155390 AT4G28110.1 70.543 129 37 1 1 129 1 128 1.55e-65 207
Msa1155390 AT4G05100.1 70.769 130 36 2 1 129 1 129 3.27e-65 208
Msa1155390 AT1G66230.1 70.229 131 38 1 1 131 1 130 1.05e-64 205
Msa1155390 AT5G65230.1 69.767 129 38 1 1 129 1 128 4.34e-64 204
Msa1155390 AT5G16600.1 70.229 131 38 1 1 131 1 130 6.61e-64 204
Msa1155390 AT4G22680.1 70.000 130 38 1 1 130 1 129 8.71e-64 202
Msa1155390 AT4G12350.1 62.162 148 55 1 1 148 1 147 3.80e-63 201
Msa1155390 AT1G22640.1 58.000 150 62 1 1 150 1 149 1.80e-62 199
Msa1155390 AT3G13540.1 67.717 127 40 1 4 130 15 140 4.53e-62 197
Msa1155390 AT1G06180.1 75.214 117 28 1 1 117 1 116 7.02e-62 197
Msa1155390 AT4G17785.2 66.923 130 41 2 1 129 1 129 9.20e-62 200
Msa1155390 AT4G17785.1 66.923 130 41 2 1 129 1 129 1.32e-61 199
Msa1155390 AT1G09540.1 63.971 136 48 1 1 136 1 135 1.84e-61 199
Msa1155390 AT2G16720.1 65.385 130 44 1 1 130 1 129 2.72e-61 196
Msa1155390 AT4G09460.1 64.615 130 45 1 1 130 1 129 5.17e-61 194
Msa1155390 AT1G35515.1 64.615 130 45 1 1 130 1 129 6.58e-61 193
Msa1155390 AT4G38620.1 61.429 140 53 1 1 140 1 139 7.87e-61 195
Msa1155390 AT3G23250.1 72.881 118 31 1 1 118 1 117 9.17e-61 195
Msa1155390 AT2G31180.1 73.504 117 30 1 1 117 1 116 9.25e-61 194
Msa1155390 AT5G14340.1 64.925 134 46 1 1 134 13 145 1.75e-60 194
Msa1155390 AT5G26660.1 65.152 132 45 1 1 132 1 131 3.45e-60 196
Msa1155390 AT5G60890.1 65.152 132 45 1 1 132 1 131 8.52e-60 193
Msa1155390 AT1G08810.1 52.284 197 82 5 1 188 1 194 1.61e-59 192
Msa1155390 AT5G61420.2 64.394 132 46 1 1 132 1 131 4.79e-59 193
Msa1155390 AT4G34990.1 64.615 130 45 1 1 130 1 129 8.80e-59 189
Msa1155390 AT1G57560.1 62.406 133 49 1 1 133 1 132 1.51e-58 190
Msa1155390 AT4G01680.3 60.993 141 54 1 1 141 1 140 3.05e-58 187
Msa1155390 AT1G57560.2 63.359 131 47 1 1 131 1 130 3.64e-58 188
Msa1155390 AT5G07690.1 60.839 143 54 2 1 143 1 141 4.18e-58 190
Msa1155390 AT3G47600.1 55.618 178 61 5 1 168 1 170 8.09e-58 189
Msa1155390 AT2G47460.1 63.910 133 47 1 1 133 1 132 9.10e-58 190
Msa1155390 AT5G62470.2 55.357 168 70 3 1 168 1 163 1.38e-57 189
Msa1155390 AT4G01680.1 60.993 141 54 1 1 141 1 140 2.30e-57 188
Msa1155390 AT5G56110.1 59.259 135 54 1 1 135 1 134 2.55e-57 187
Msa1155390 AT1G18570.1 62.857 140 50 2 1 139 1 139 2.90e-57 188
Msa1155390 AT5G62320.1 62.879 132 43 1 2 127 3 134 3.62e-57 184
Msa1155390 AT5G49330.1 66.667 120 39 1 1 120 1 119 7.16e-57 187
Msa1155390 AT5G54230.1 63.910 133 47 1 1 133 1 132 1.74e-56 185
Msa1155390 AT3G28910.1 68.293 123 38 1 1 123 1 122 3.42e-56 184
Msa1155390 AT5G62470.1 55.357 168 69 4 1 168 1 162 3.57e-56 185
Msa1155390 AT5G07700.1 62.319 138 49 2 1 138 1 135 3.90e-56 185
Msa1155390 AT5G07700.2 62.319 138 49 2 1 138 1 135 3.90e-56 185
Msa1155390 AT1G74430.1 65.909 132 44 1 1 132 1 131 4.66e-56 182
Msa1155390 AT1G74650.1 71.795 117 32 1 1 117 1 116 7.68e-56 184
Msa1155390 AT1G79180.1 48.558 208 100 4 2 207 4 206 2.03e-55 182
Msa1155390 AT1G18710.1 64.615 130 45 1 1 130 1 129 2.09e-55 181
Msa1155390 AT3G62610.1 69.231 117 35 1 1 117 1 116 2.47e-55 183
Msa1155390 AT1G16490.1 67.797 118 37 1 2 119 4 120 5.42e-55 180
Msa1155390 AT1G74080.1 63.077 130 47 1 1 130 1 129 9.98e-55 181
Msa1155390 AT4G01680.2 56.209 153 54 2 1 141 1 152 2.51e-54 181
Msa1155390 AT1G56160.1 67.241 116 37 1 2 117 4 118 6.59e-54 178
Msa1155390 AT3G12820.1 67.826 115 36 1 3 117 5 118 3.20e-52 172
Msa1155390 AT3G13890.2 64.706 119 41 1 1 119 1 118 4.34e-52 175
Msa1155390 AT3G12720.1 60.630 127 49 1 6 132 16 141 7.05e-52 173
Msa1155390 AT4G37780.1 61.345 119 46 0 1 119 1 119 1.73e-51 172
Msa1155390 AT3G28470.1 46.734 199 86 4 1 187 1 191 3.42e-51 171
Msa1155390 AT5G57620.1 45.652 184 97 2 1 181 1 184 3.61e-50 169
Msa1155390 AT3G49690.1 61.538 117 45 0 1 117 1 117 4.31e-50 168
Msa1155390 AT1G63910.1 54.815 135 60 1 1 135 1 134 6.00e-50 170
Msa1155390 AT5G65790.1 60.684 117 46 0 1 117 1 117 1.97e-49 168
Msa1155390 AT3G13890.1 60.156 128 41 2 1 119 1 127 4.48e-49 167
Msa1155390 AT1G79180.2 41.909 241 100 5 2 207 4 239 1.03e-48 165
Msa1155390 AT2G32460.1 54.225 142 52 2 4 145 10 138 1.59e-48 169
Msa1155390 AT2G36890.1 54.887 133 59 1 1 132 1 133 1.71e-48 164
Msa1155390 AT5G23000.1 59.829 117 47 0 1 117 1 117 1.93e-48 164
Msa1155390 AT2G32460.2 55.882 136 47 2 10 145 4 126 4.12e-48 167
Msa1155390 AT2G36890.2 54.887 133 59 1 1 132 42 174 4.13e-48 164
Msa1155390 AT5G55020.1 68.224 107 33 1 12 118 26 131 2.06e-47 166
Msa1155390 AT5G12870.1 63.063 111 40 1 10 120 16 125 2.16e-45 155
Msa1155390 AT3G08500.1 63.964 111 39 1 8 118 26 135 2.29e-45 157
Msa1155390 AT4G26930.1 66.346 104 34 1 12 115 19 121 2.37e-45 158
Msa1155390 AT5G14750.1 56.693 127 50 3 13 138 17 139 3.13e-45 152
Msa1155390 AT3G27810.1 46.667 180 89 3 12 187 20 196 7.14e-45 152
Msa1155390 AT3G01530.1 64.486 107 37 1 12 118 25 130 8.51e-45 151
Msa1155390 AT1G25340.1 54.032 124 56 1 13 136 19 141 3.70e-44 152
Msa1155390 AT5G06100.1 58.036 112 46 1 8 119 28 138 6.22e-44 155
Msa1155390 AT3G24310.1 60.360 111 43 1 9 119 15 124 6.28e-44 151
Msa1155390 AT5G40330.1 60.952 105 40 1 13 117 13 116 7.11e-44 149
Msa1155390 AT5G06100.5 58.036 112 46 1 8 119 28 138 2.79e-43 155
Msa1155390 AT5G06100.2 58.036 112 46 1 8 119 28 138 2.79e-43 155
Msa1155390 AT5G06100.3 58.036 112 46 1 8 119 28 138 2.79e-43 155
Msa1155390 AT5G06100.4 58.036 112 46 1 8 119 28 138 2.79e-43 155
Msa1155390 AT5G40350.1 61.818 110 41 1 12 121 17 125 2.94e-43 148
Msa1155390 AT2G26960.1 62.281 114 41 2 9 122 17 128 3.23e-43 153
Msa1155390 AT3G11440.2 56.410 117 46 2 7 119 32 147 4.01e-43 154
Msa1155390 AT4G13480.1 62.264 106 39 1 13 118 7 111 6.86e-43 148
Msa1155390 AT3G27920.1 60.000 105 41 1 13 117 15 118 1.53e-42 146
Msa1155390 AT3G11440.3 56.410 117 46 2 7 119 32 147 1.68e-42 154
Msa1155390 AT3G11440.4 56.410 117 46 2 7 119 32 147 1.68e-42 154
Msa1155390 AT3G11440.1 56.410 117 46 2 7 119 32 147 1.68e-42 154
Msa1155390 AT3G30210.1 58.716 109 44 1 11 119 26 133 2.91e-42 147
Msa1155390 AT1G68320.1 52.000 125 59 1 12 136 19 142 3.68e-42 147
Msa1155390 AT5G35550.1 57.983 119 47 2 1 117 1 118 1.52e-41 145
Msa1155390 AT5G52600.1 40.722 194 97 4 9 188 9 198 2.71e-41 142
Msa1155390 AT5G26660.2 70.115 87 26 0 46 132 14 100 7.99e-41 144
Msa1155390 AT1G25340.2 51.613 124 54 2 13 136 19 136 7.84e-40 140
Msa1155390 AT3G46130.1 56.481 108 46 1 9 116 6 112 1.32e-39 139
Msa1155390 AT1G25340.3 51.613 124 54 2 13 136 19 136 1.47e-39 141
Msa1155390 AT5G59780.3 57.692 104 43 1 13 116 9 111 4.61e-39 137
Msa1155390 AT1G66370.1 56.897 116 45 2 1 116 1 111 1.14e-38 137
Msa1155390 AT2G47190.1 53.571 112 51 1 12 123 20 130 1.70e-38 137
Msa1155390 AT3G53200.1 57.143 105 44 1 12 116 9 112 7.75e-38 134
Msa1155390 AT3G06490.1 57.025 121 51 1 8 128 15 134 1.08e-37 136
Msa1155390 AT1G48000.1 54.464 112 50 1 12 123 32 142 2.39e-37 133
Msa1155390 AT3G48920.1 51.667 120 52 2 9 128 15 128 1.72e-36 131
Msa1155390 AT5G52260.1 51.538 130 58 3 9 137 9 134 5.43e-36 130
Msa1155390 AT2G26950.1 53.509 114 51 2 9 122 13 124 1.81e-35 132
Msa1155390 AT3G47600.2 52.632 133 46 4 46 168 39 164 5.28e-35 129
Msa1155390 AT4G25560.1 53.571 112 50 2 13 123 11 121 2.00e-34 127
Msa1155390 AT1G66380.1 58.879 107 43 1 10 116 6 111 5.76e-34 121
Msa1155390 AT5G49620.1 51.200 125 60 1 4 128 18 141 1.03e-33 125
Msa1155390 AT5G14750.3 59.574 94 29 3 41 128 5 95 1.13e-33 121
Msa1155390 AT1G56650.1 51.613 124 49 2 10 133 6 118 3.65e-32 120
Msa1155390 AT3G60460.1 51.327 113 53 2 9 120 8 119 4.31e-32 121
Msa1155390 AT3G27810.2 43.836 146 76 2 46 187 4 147 5.73e-32 117
Msa1155390 AT1G66390.1 57.944 107 44 1 10 116 6 111 6.79e-32 119
Msa1155390 AT5G35550.2 56.731 104 33 2 41 144 45 136 8.27e-32 119
Msa1155390 AT3G12820.2 72.857 70 19 0 48 117 1 70 2.49e-31 116
Msa1155390 AT1G22640.3 54.945 91 41 0 60 150 2 92 4.47e-31 115
Msa1155390 AT3G46130.3 61.250 80 31 0 39 118 3 82 1.33e-30 115
Msa1155390 AT3G46130.4 65.753 73 25 0 46 118 20 92 3.35e-30 114
Msa1155390 AT5G59780.2 65.753 73 25 0 46 118 20 92 3.56e-30 114
Msa1155390 AT5G49620.2 46.043 139 60 2 4 128 18 155 3.94e-30 116
Msa1155390 AT3G53200.2 64.789 71 25 0 46 116 9 79 3.98e-30 113
Msa1155390 AT5G40350.2 63.158 76 28 0 46 121 5 80 6.51e-30 112
Msa1155390 AT1G18960.1 46.341 123 56 3 14 133 10 125 6.85e-29 112
Msa1155390 AT3G09230.1 50.000 108 44 3 14 117 55 156 2.24e-27 110
Msa1155390 AT3G55730.1 49.074 108 51 3 14 120 56 160 7.20e-27 108
Msa1155390 AT3G23250.2 76.271 59 14 0 60 118 2 60 2.17e-26 104
Msa1155390 AT2G39880.1 50.000 104 48 3 14 116 50 150 3.02e-26 107
Msa1155390 AT3G50060.1 49.038 104 49 3 14 116 6 106 8.19e-26 104
Msa1155390 AT1G71030.2 53.247 77 36 0 52 128 5 81 1.19e-25 100
Msa1155390 AT5G40360.1 43.333 120 65 3 1 120 145 261 1.54e-25 104
Msa1155390 AT1G71030.1 53.247 77 36 0 52 128 19 95 1.61e-25 101
Msa1155390 AT4G18770.1 45.946 111 54 2 9 117 212 318 2.59e-25 105
Msa1155390 AT5G11510.2 48.624 109 52 3 12 119 79 184 8.13e-25 105
Msa1155390 AT5G11510.5 48.624 109 52 3 12 119 79 184 9.24e-25 104
Msa1155390 AT5G11510.3 48.624 109 52 3 12 119 79 184 9.34e-25 104
Msa1155390 AT5G11510.1 48.624 109 52 3 12 119 79 184 9.34e-25 104
Msa1155390 AT5G11510.4 48.624 109 52 3 12 119 79 184 9.34e-25 104
Msa1155390 AT2G23290.1 50.000 104 48 3 14 116 13 113 9.91e-25 101
Msa1155390 AT5G15310.3 64.634 82 25 2 89 168 9 88 1.25e-24 100
Msa1155390 AT5G02320.1 49.074 108 51 3 12 118 125 229 2.13e-24 103
Msa1155390 AT5G02320.2 49.074 108 51 3 12 118 125 229 2.13e-24 103
Msa1155390 AT5G02320.3 49.074 108 51 3 12 118 65 169 2.47e-24 102
Msa1155390 AT4G37260.1 48.077 104 50 3 14 116 13 113 3.22e-24 100
Msa1155390 AT5G67300.1 49.038 104 49 3 14 116 6 106 4.76e-24 99.8
Msa1155390 AT5G58850.1 44.860 107 57 1 10 116 101 205 7.08e-24 101
Msa1155390 AT3G27785.1 48.039 102 51 2 9 110 184 283 1.00e-23 100
Msa1155390 AT3G09370.3 41.135 141 73 3 12 148 141 275 1.33e-23 100
Msa1155390 AT3G09370.2 41.135 141 73 3 12 148 133 267 1.44e-23 100
Msa1155390 AT3G09370.1 41.135 141 73 3 12 148 128 262 1.75e-23 100
Msa1155390 AT1G17950.1 47.115 104 51 3 14 116 5 105 3.03e-23 96.3
Msa1155390 AT5G14750.4 63.793 58 21 0 60 117 2 59 3.76e-23 93.2
Msa1155390 AT5G14750.2 63.793 58 21 0 60 117 2 59 3.76e-23 93.2
Msa1155390 AT1G66380.3 59.740 77 31 0 40 116 2 78 4.57e-23 92.0
Msa1155390 AT4G32730.1 44.954 109 56 3 12 119 85 190 2.17e-22 97.8
Msa1155390 AT4G32730.5 44.954 109 56 3 12 119 85 190 2.41e-22 97.8
Msa1155390 AT4G32730.4 44.954 109 56 3 12 119 85 190 2.41e-22 97.8
Msa1155390 AT4G32730.3 44.954 109 56 3 12 119 85 190 2.41e-22 97.8
Msa1155390 AT4G32730.2 44.954 109 56 3 12 119 85 190 2.41e-22 97.8
Msa1155390 AT5G11050.1 43.519 108 57 3 10 116 101 205 2.43e-22 96.7
Msa1155390 AT4G00540.2 45.536 112 56 3 12 120 101 210 3.40e-22 96.3
Msa1155390 AT4G00540.1 45.536 112 56 3 12 120 99 208 7.87e-22 95.5
Msa1155390 AT1G73410.1 46.226 106 53 3 14 118 6 108 1.86e-21 91.3
Msa1155390 AT1G73410.2 45.794 107 54 3 14 119 6 109 3.83e-21 89.7
Msa1155390 AT1G69560.1 36.567 134 83 1 9 142 102 233 5.34e-21 91.7
Msa1155390 AT1G69560.2 36.567 134 83 1 9 142 118 249 6.14e-21 92.0
Msa1155390 AT4G33450.1 40.171 117 61 4 3 118 13 121 1.61e-20 89.0
Msa1155390 AT2G25230.1 42.857 112 59 4 9 119 21 128 1.95e-20 88.6
Msa1155390 AT1G66380.2 54.651 86 38 1 10 95 6 90 4.42e-20 84.0
Msa1155390 AT1G26780.1 42.056 107 60 1 12 118 96 200 1.10e-19 87.4
Msa1155390 AT1G26780.2 42.056 107 60 1 12 118 96 200 1.93e-19 87.8
Msa1155390 AT5G61420.1 70.588 51 15 0 82 132 2 52 2.48e-18 83.6
Msa1155390 AT2G37630.1 37.069 116 70 2 17 130 7 121 3.35e-17 81.6
Msa1155390 AT3G29020.1 37.736 106 62 3 14 118 65 167 7.13e-17 78.6
Msa1155390 AT5G17800.1 40.952 105 60 2 14 118 93 195 7.82e-17 80.1
Msa1155390 AT5G59780.1 62.500 48 18 0 71 118 1 48 1.71e-16 76.3
Msa1155390 AT3G29020.2 37.736 106 62 3 14 118 67 169 1.74e-16 78.6
Msa1155390 AT3G46130.2 62.500 48 18 0 71 118 1 48 2.14e-16 76.3
Msa1155390 AT2G02820.3 40.196 102 59 1 17 118 33 132 3.58e-16 78.2
Msa1155390 AT2G02820.1 40.196 102 59 1 17 118 33 132 6.65e-16 78.2
Msa1155390 AT2G02820.2 40.196 102 59 1 17 118 33 132 8.39e-16 77.8
Msa1155390 AT5G40430.1 37.069 116 59 5 9 119 49 155 8.84e-16 75.9
Msa1155390 AT1G14350.2 40.196 102 59 1 17 118 28 127 1.73e-15 77.0
Msa1155390 AT1G14350.1 40.196 102 59 1 17 118 28 127 1.73e-15 77.0
Msa1155390 AT4G28110.2 73.171 41 11 0 89 129 4 44 7.22e-15 72.4
Msa1155390 AT1G22640.2 50.000 62 31 0 89 150 16 77 8.50e-15 71.6
Msa1155390 AT3G28910.2 65.217 46 16 0 78 123 1 46 1.51e-14 72.4
Msa1155390 AT1G74650.3 75.000 40 10 0 78 117 1 40 1.80e-14 72.4
Msa1155390 AT1G74430.2 60.714 56 21 1 78 132 7 62 6.61e-14 69.7
Msa1155390 AT5G14340.2 60.870 46 18 0 89 134 10 55 2.45e-13 67.8
Msa1155390 AT4G25560.2 55.769 52 22 1 72 122 3 54 7.18e-13 67.0
Msa1155390 AT5G39700.1 33.636 110 71 2 9 118 51 158 3.86e-12 64.3
Msa1155390 AT1G14350.3 48.387 62 32 0 57 118 23 84 3.86e-12 66.6
Msa1155390 AT1G14350.4 48.387 62 32 0 57 118 23 84 3.86e-12 66.6

Find 55 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATTACTTTCTCCGTATA+TGG 0.178709 7_4:+43340295 Msa1155390:CDS
GATGCGTGTGACTTGTTATT+TGG 0.197120 7_4:-43340150 None:intergenic
TATCTCATTGTCTGTTCTTC+CGG 0.226667 7_4:-43340034 None:intergenic
AGTAGTGACAAATGCCTAAA+AGG 0.245360 7_4:-43340649 None:intergenic
GATAATGATCCTGCAGAAAT+TGG 0.270588 7_4:-43340402 None:intergenic
ATCTCATTGTCTGTTCTTCC+GGG 0.293138 7_4:-43340033 None:intergenic
ACAATGAGATAAAGAACTTT+TGG 0.296577 7_4:+43340046 Msa1155390:CDS
ATGTTAGTATGATCTGTATC+TGG 0.314171 7_4:-43340357 None:intergenic
AACAATGACATGAGCTTCTT+AGG 0.316806 7_4:+43340609 Msa1155390:CDS
TTCGCTGTGGTAAGAGTTGT+AGG 0.328913 7_4:+43339045 Msa1155390:CDS
TGAAATGAAACCTGTGATCT+TGG 0.411319 7_4:-43336413 None:intergenic
TTCATGCTATCCTTGGAAAT+AGG 0.412323 7_4:+43339147 Msa1155390:CDS
CAACTTCAGAGTTCCATATA+CGG 0.425073 7_4:-43340308 None:intergenic
GATAAGAAGGGTTTGAAGAA+AGG 0.426388 7_4:+43336310 Msa1155390:CDS
ATTCAGCTTCATGCTATCCT+TGG 0.444507 7_4:+43339140 Msa1155390:CDS
AAGCTCATGTCATTGTTCAT+AGG 0.447397 7_4:-43340603 None:intergenic
ATGCGTGTGACTTGTTATTT+GGG 0.448476 7_4:-43340149 None:intergenic
AACACGTCACATGGCTCAAT+GGG 0.449186 7_4:+43340179 Msa1155390:CDS
AGAAATGGAGTCACATTTGT+TGG 0.449246 7_4:-43340427 None:intergenic
CGTATATGGAACTCTGAAGT+TGG 0.454090 7_4:+43340309 Msa1155390:CDS
GCTCGCTGTAACAGCAGAAA+TGG 0.457228 7_4:-43340442 None:intergenic
TGATGAATCTTGCAAGTCAT+TGG 0.458871 7_4:-43340550 None:intergenic
GAAGAAACGTCTCAAAAGCC+TGG 0.462496 7_4:+43340080 Msa1155390:CDS
GACACCTTGTTGTGATAAGA+AGG 0.463796 7_4:+43336297 Msa1155390:CDS
CGTTCTCTTCCCAAGATCAC+AGG 0.469797 7_4:+43336403 Msa1155390:CDS
CAACACGTCACATGGCTCAA+TGG 0.478902 7_4:+43340178 Msa1155390:CDS
GTGGTAAGAGTTGTAGGCTT+AGG 0.479481 7_4:+43339051 Msa1155390:CDS
GTAGTGACAAATGCCTAAAA+GGG 0.479751 7_4:-43340648 None:intergenic
AAAATGGTGGTCATGGAAGC+TGG 0.495565 7_4:+43336380 Msa1155390:CDS
GAAATGAAACCTGTGATCTT+GGG 0.498334 7_4:-43336412 None:intergenic
AATGTCAGGTCTGAGATAGT+TGG 0.502224 7_4:-43339078 None:intergenic
GAACTGTTTACCTATTTCCA+AGG 0.507409 7_4:-43339157 None:intergenic
TGTCAGAGTCCAATTTCTGC+AGG 0.508361 7_4:+43340393 Msa1155390:CDS
ATTTGGGTAACTAGTTAATG+AGG 0.514248 7_4:-43340133 None:intergenic
AAGGGTCCACGTTTAATGTC+AGG 0.525709 7_4:-43339092 None:intergenic
TAGTATTGTGAATGAAGAGT+TGG 0.529281 7_4:+43340467 Msa1155390:CDS
GTAAGAGTTGTAGGCTTAGG+TGG 0.537463 7_4:+43339054 Msa1155390:CDS
TGGCTCAATGGGAGAGTGCA+AGG 0.542923 7_4:+43340190 Msa1155390:CDS
AGGACCTTGGACTGCTGAAG+AGG 0.547560 7_4:+43336330 Msa1155390:CDS
TTGTGAATGAAGAGTTGGAT+TGG 0.552854 7_4:+43340472 Msa1155390:CDS
AGGGTTTGAAGAAAGGACCT+TGG 0.560635 7_4:+43336317 Msa1155390:CDS
AAGAGAGAAAGAAAATGGGA+AGG 0.561518 7_4:+43336275 None:intergenic
AAGAAACGTCTCAAAAGCCT+GGG 0.574138 7_4:+43340081 Msa1155390:CDS
TCATCCTCTTCAGCAGTCCA+AGG 0.575790 7_4:-43336334 None:intergenic
CTTTCAGGTCTTCTTCGCTG+TGG 0.579170 7_4:+43339032 Msa1155390:intron
ATCGGTTTCAACACGTCACA+TGG 0.583488 7_4:+43340170 Msa1155390:CDS
TAACTAGTTAATGAGGCTAC+CGG 0.584460 7_4:-43340126 None:intergenic
AAATAACAAGTCACACGCAT+CGG 0.590420 7_4:+43340152 Msa1155390:CDS
ACACCTTGTTGTGATAAGAA+GGG 0.593768 7_4:+43336298 Msa1155390:CDS
GCAATTGCATCTCAGTTACC+CGG 0.621059 7_4:+43340015 Msa1155390:CDS
ACGTGGACCCTTTACTCCTG+AGG 0.625196 7_4:+43339103 Msa1155390:CDS
CTCAGACCTGACATTAAACG+TGG 0.626723 7_4:+43339086 Msa1155390:CDS
AGTTGGAGATGCATTTCGCA+AGG 0.630719 7_4:+43340326 Msa1155390:CDS
AAACCCTTCTTATCACAACA+AGG 0.646045 7_4:-43336301 None:intergenic
TATACGGAGAAAGTAATCAG+AGG 0.679714 7_4:-43340292 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAATCTAAATGT+TGG - chr7_4:43336787-43336806 None:intergenic 10.0%
!!! TTATTATATATTTTACTTTC+AGG + chr7_4:43339017-43339036 Msa1155390:intron 10.0%
!! AAAAGAAAGACATATATAAA+GGG - chr7_4:43336441-43336460 None:intergenic 15.0%
!! AAAAAGAAAGACATATATAA+AGG - chr7_4:43336442-43336461 None:intergenic 15.0%
!! ATCCTAAAGAATTAATATTA+TGG + chr7_4:43336707-43336726 Msa1155390:intron 15.0%
!! ATCCATAATATTAATTCTTT+AGG - chr7_4:43336712-43336731 None:intergenic 15.0%
!! AAGAATTAATATTATGGATT+TGG + chr7_4:43336713-43336732 Msa1155390:intron 15.0%
!! AAGAAAAAAAAATATAGAGT+GGG - chr7_4:43337154-43337173 None:intergenic 15.0%
!! TTCTTAAAAGTTAAAAAAAC+AGG + chr7_4:43337177-43337196 Msa1155390:intron 15.0%
!!! GATGTAAAAACAATTTTTAT+TGG - chr7_4:43337694-43337713 None:intergenic 15.0%
!!! TTCTTTGAAATAAGTTTTAT+GGG - chr7_4:43337719-43337738 None:intergenic 15.0%
!!! TTTCTTTGAAATAAGTTTTA+TGG - chr7_4:43337720-43337739 None:intergenic 15.0%
!!! ATAATGCAAATATTCTAAAA+AGG - chr7_4:43338085-43338104 None:intergenic 15.0%
!!! AATAAATAAGGGTATAATAA+TGG - chr7_4:43338701-43338720 None:intergenic 15.0%
!! TGATGAAATTCAATAAATAA+GGG - chr7_4:43338712-43338731 None:intergenic 15.0%
!! TTGATGAAATTCAATAAATA+AGG - chr7_4:43338713-43338732 None:intergenic 15.0%
!!! TCCTAAACAATATTTTTATT+CGG - chr7_4:43339542-43339561 None:intergenic 15.0%
!! AACAAATTTAACAAAATTTC+AGG + chr7_4:43339986-43340005 Msa1155390:intron 15.0%
!! GCTAACTATATTAAGAAAAA+TGG + chr7_4:43336364-43336383 Msa1155390:CDS 20.0%
!! AACTATATTAAGAAAAATGG+TGG + chr7_4:43336367-43336386 Msa1155390:CDS 20.0%
!! AAAGAAAGACATATATAAAG+GGG - chr7_4:43336440-43336459 None:intergenic 20.0%
!!! ATTTTACAAAACTACATCTT+TGG - chr7_4:43336533-43336552 None:intergenic 20.0%
!!! CTTGAATAAACTTTTTTTCA+AGG + chr7_4:43336840-43336859 Msa1155390:intron 20.0%
!!! ATTTTTATGTCTCTCAATAA+TGG + chr7_4:43336929-43336948 Msa1155390:intron 20.0%
!! CAAGAAAAAAAAATATAGAG+TGG - chr7_4:43337155-43337174 None:intergenic 20.0%
!!! AGTATTTTTGCTTATATTTC+GGG - chr7_4:43337502-43337521 None:intergenic 20.0%
!!! GAGTATTTTTGCTTATATTT+CGG - chr7_4:43337503-43337522 None:intergenic 20.0%
!!! TGTCTTTTTTGCTTATATTT+TGG - chr7_4:43337538-43337557 None:intergenic 20.0%
!!! GAATAAGCAAAAGTTTTTAT+TGG - chr7_4:43337607-43337626 None:intergenic 20.0%
!!! AAACAATTTTTATTGGCTAT+TGG - chr7_4:43337687-43337706 None:intergenic 20.0%
!!! AAAATTGAAAACAAGAGTTT+TGG - chr7_4:43337919-43337938 None:intergenic 20.0%
!! AAAGAAATTGAATCATTGTT+TGG - chr7_4:43337962-43337981 None:intergenic 20.0%
!! AAACAATGATTCAATTTCTT+TGG + chr7_4:43337961-43337980 Msa1155390:intron 20.0%
!!! TGTTTATACTGATTAGTATT+AGG + chr7_4:43338530-43338549 Msa1155390:intron 20.0%
!!! GTTTATACTGATTAGTATTA+GGG + chr7_4:43338531-43338550 Msa1155390:intron 20.0%
!! AACAGTTCAGTATTTAATTA+AGG + chr7_4:43339172-43339191 Msa1155390:intron 20.0%
!! TAAATATCATAGATTTGTGA+AGG - chr7_4:43339262-43339281 None:intergenic 20.0%
!!! TAAAACATGATTTTGAATAG+AGG + chr7_4:43339440-43339459 Msa1155390:intron 20.0%
!!! TAAACAATATTTTTATTCGG+GGG - chr7_4:43339539-43339558 None:intergenic 20.0%
!!! CTAAACAATATTTTTATTCG+GGG - chr7_4:43339540-43339559 None:intergenic 20.0%
!!! CCTAAACAATATTTTTATTC+GGG - chr7_4:43339541-43339560 None:intergenic 20.0%
!! AAATTTAACAAAATTTCAGG+TGG + chr7_4:43339989-43340008 Msa1155390:intron 20.0%
!!! AATTTAACAAAATTTCAGGT+GGG + chr7_4:43339990-43340009 Msa1155390:intron 20.0%
!!! GATGTAGTTTTGTAAAATCA+TGG + chr7_4:43336535-43336554 Msa1155390:intron 25.0%
!! TTTAGGATTGACTTTGAATT+TGG - chr7_4:43336695-43336714 None:intergenic 25.0%
! AGAACTTTCTTAACTTTCTT+TGG + chr7_4:43336882-43336901 Msa1155390:intron 25.0%
! AGACATAAAAATTACCAACA+AGG - chr7_4:43336921-43336940 None:intergenic 25.0%
!! TATGAAGTTTAGAACAAAAG+TGG + chr7_4:43336978-43336997 Msa1155390:intron 25.0%
!! ATGAAGTTTAGAACAAAAGT+GGG + chr7_4:43336979-43336998 Msa1155390:intron 25.0%
! TAATTATAATGTTCCAAGCA+TGG - chr7_4:43337248-43337267 None:intergenic 25.0%
! TTAATTGTTGACAAAGTTGA+TGG - chr7_4:43337316-43337335 None:intergenic 25.0%
! AGGAAAGAAAAGAAAAAATG+TGG - chr7_4:43337389-43337408 None:intergenic 25.0%
!!! TATGTTTCAAGTTCATAGAA+AGG - chr7_4:43337409-43337428 None:intergenic 25.0%
!!! TTTTTATTGGCTATTGGTTA+TGG - chr7_4:43337681-43337700 None:intergenic 25.0%
!!! AGTTTTGGTTAGGAATATAT+TGG - chr7_4:43337904-43337923 None:intergenic 25.0%
!!! TTATTTTGCTTCTTTGACAA+TGG - chr7_4:43338023-43338042 None:intergenic 25.0%
! CTAAAAAGGTCAAGTAATAT+GGG - chr7_4:43338071-43338090 None:intergenic 25.0%
! TCTAAAAAGGTCAAGTAATA+TGG - chr7_4:43338072-43338091 None:intergenic 25.0%
!! TTTTCCCTTTAATTAATGTC+TGG - chr7_4:43338340-43338359 None:intergenic 25.0%
! TTAAAGGGAAAATACTTGAA+TGG + chr7_4:43338348-43338367 Msa1155390:intron 25.0%
! TCCACTAACTACAATTAATA+AGG + chr7_4:43338743-43338762 Msa1155390:intron 25.0%
! CCACTAACTACAATTAATAA+GGG + chr7_4:43338744-43338763 Msa1155390:intron 25.0%
!!! ATTGATTGTGTTGATTTCAA+TGG - chr7_4:43338796-43338815 None:intergenic 25.0%
!! CTCTAAATTATTGTCGTTTA+AGG - chr7_4:43338844-43338863 None:intergenic 25.0%
! AAACGACAATAATTTAGAGA+CGG + chr7_4:43338845-43338864 Msa1155390:intron 25.0%
! AATAGAATGCACAAAATTTG+AGG + chr7_4:43338928-43338947 Msa1155390:intron 25.0%
! ATAGAATGCACAAAATTTGA+GGG + chr7_4:43338929-43338948 Msa1155390:intron 25.0%
! TTCAATTCATACAGTTTCTT+TGG + chr7_4:43339203-43339222 Msa1155390:intron 25.0%
!! TGAAACTTTTAGATCTCTAT+AGG + chr7_4:43339394-43339413 Msa1155390:intron 25.0%
!!! AAACAATATTTTTATTCGGG+GGG - chr7_4:43339538-43339557 None:intergenic 25.0%
! CCCGAATAAAAATATTGTTT+AGG + chr7_4:43339538-43339557 Msa1155390:intron 25.0%
! AATTATAACTTACGCAATGT+AGG - chr7_4:43339657-43339676 None:intergenic 25.0%
! CTCAACTTAACTAAAATTCA+TGG + chr7_4:43339684-43339703 Msa1155390:intron 25.0%
! CTCTCATTTAAATAAGTCTT+AGG + chr7_4:43339736-43339755 Msa1155390:intron 25.0%
! ACTATCTAGATTTAAAGATC+AGG - chr7_4:43339889-43339908 None:intergenic 25.0%
! GATCTTTAAATCTAGATAGT+TGG + chr7_4:43339889-43339908 Msa1155390:intron 25.0%
!! ACAATGAGATAAAGAACTTT+TGG + chr7_4:43340046-43340065 Msa1155390:CDS 25.0%
ATTAAGAAAAATGGTGGTCA+TGG + chr7_4:43336373-43336392 Msa1155390:CDS 30.0%
! TTTTGTAAAATCATGGTGAC+TGG + chr7_4:43336542-43336561 Msa1155390:intron 30.0%
! TCTAGAACTTCACAAAATCA+TGG - chr7_4:43336637-43336656 None:intergenic 30.0%
TTTATGTCTCTCAATAATGG+TGG + chr7_4:43336932-43336951 Msa1155390:intron 30.0%
TTATGTCTCTCAATAATGGT+GGG + chr7_4:43336933-43336952 Msa1155390:intron 30.0%
! TGAAGTTTAGAACAAAAGTG+GGG + chr7_4:43336980-43336999 Msa1155390:intron 30.0%
ACGCATATAAAACCAAAGAT+AGG - chr7_4:43337031-43337050 None:intergenic 30.0%
!!! TTTGGTTTTATATGCGTCAA+TGG + chr7_4:43337034-43337053 Msa1155390:intron 30.0%
ATGTTCAAGAGTCCTTAAAT+TGG - chr7_4:43337097-43337116 None:intergenic 30.0%
AGAAAAAATGTGGTTGAGAA+GGG - chr7_4:43337379-43337398 None:intergenic 30.0%
AAGAAAAAATGTGGTTGAGA+AGG - chr7_4:43337380-43337399 None:intergenic 30.0%
TCGCTCAAATAACAAAATGT+TGG + chr7_4:43337452-43337471 Msa1155390:intron 30.0%
! GCTATTGGTTATGGAAAATA+TGG - chr7_4:43337672-43337691 None:intergenic 30.0%
TTGGTTAGGAATATATTGGA+AGG - chr7_4:43337900-43337919 None:intergenic 30.0%
!!! TGAAAACAAGAGTTTTGGTT+AGG - chr7_4:43337914-43337933 None:intergenic 30.0%
TCAACTAGGTCAAGTAATAT+GGG + chr7_4:43338284-43338303 Msa1155390:intron 30.0%
TCAGCCAGACATTAATTAAA+GGG + chr7_4:43338333-43338352 Msa1155390:intron 30.0%
TAATTAGAGAAAGACTTGTG+TGG - chr7_4:43338501-43338520 None:intergenic 30.0%
TTCTTTATCTTGTGCCTTAA+GGG - chr7_4:43338572-43338591 None:intergenic 30.0%
AAGAGACTATTATTGTGAGA+CGG - chr7_4:43338610-43338629 None:intergenic 30.0%
CCCTTATTAATTGTAGTTAG+TGG - chr7_4:43338747-43338766 None:intergenic 30.0%
!!! AGGGAGTAGTAATTTTTTGT+TGG + chr7_4:43338868-43338887 Msa1155390:intron 30.0%
! TGAGGGAATATTTCCATTTT+TGG + chr7_4:43338946-43338965 Msa1155390:intron 30.0%
!! GAGGGAATATTTCCATTTTT+GGG + chr7_4:43338947-43338966 Msa1155390:intron 30.0%
! ATGACTAATTTTTCTTCCTC+AGG - chr7_4:43339122-43339141 None:intergenic 30.0%
ATTCATACAGTTTCTTTGGA+AGG + chr7_4:43339207-43339226 Msa1155390:intron 30.0%
! TTCATACAGTTTCTTTGGAA+GGG + chr7_4:43339208-43339227 Msa1155390:intron 30.0%
! ATTTTACGTACTACATGAAG+AGG - chr7_4:43339289-43339308 None:intergenic 30.0%
TAGCAAAATTTGTGACACAA+GGG - chr7_4:43339469-43339488 None:intergenic 30.0%
ATAGCAAAATTTGTGACACA+AGG - chr7_4:43339470-43339489 None:intergenic 30.0%
GTAAGAGTTTGAACTGATTA+AGG - chr7_4:43339929-43339948 None:intergenic 30.0%
ATTTGGGTAACTAGTTAATG+AGG - chr7_4:43340136-43340155 None:intergenic 30.0%
! TCGATTTTTGTGAAGGAATT+AGG - chr7_4:43340267-43340286 None:intergenic 30.0%
ATGTTAGTATGATCTGTATC+TGG - chr7_4:43340360-43340379 None:intergenic 30.0%
TAGTATTGTGAATGAAGAGT+TGG + chr7_4:43340467-43340486 Msa1155390:CDS 30.0%
! ACACCTTGTTGTGATAAGAA+GGG + chr7_4:43336298-43336317 Msa1155390:CDS 35.0%
AAACCCTTCTTATCACAACA+AGG - chr7_4:43336304-43336323 None:intergenic 35.0%
GATAAGAAGGGTTTGAAGAA+AGG + chr7_4:43336310-43336329 Msa1155390:CDS 35.0%
GAAATGAAACCTGTGATCTT+GGG - chr7_4:43336415-43336434 None:intergenic 35.0%
TGAAATGAAACCTGTGATCT+TGG - chr7_4:43336416-43336435 None:intergenic 35.0%
!!! GACTTGCTAAGTGCATTTTA+AGG + chr7_4:43336473-43336492 Msa1155390:intron 35.0%
TAATAAACATGCACCGAGTT+TGG + chr7_4:43336595-43336614 Msa1155390:intron 35.0%
GAATCAACTACAATCCTTGT+TGG + chr7_4:43336904-43336923 Msa1155390:intron 35.0%
ACACATCACTTGCCAATTTA+AGG + chr7_4:43337082-43337101 Msa1155390:intron 35.0%
AAAATATAGAGTGGGAGACA+AGG - chr7_4:43337146-43337165 None:intergenic 35.0%
GACATATTTAATGCCATGCT+TGG + chr7_4:43337232-43337251 Msa1155390:intron 35.0%
!! GACAAAGTTGATGGATACTT+GGG - chr7_4:43337307-43337326 None:intergenic 35.0%
!! TGACAAAGTTGATGGATACT+TGG - chr7_4:43337308-43337327 None:intergenic 35.0%
! TTCATTTAAGGTAGTTAGCG+AGG - chr7_4:43337352-43337371 None:intergenic 35.0%
ATAACGTAAGAAATCCGAGT+CGG + chr7_4:43337426-43337445 Msa1155390:intron 35.0%
! TTGCTTATAATTTGAGACGC+AGG + chr7_4:43337805-43337824 Msa1155390:intron 35.0%
! TGCTTATAATTTGAGACGCA+GGG + chr7_4:43337806-43337825 Msa1155390:intron 35.0%
! GGGAGTACACTACATTTATT+AGG + chr7_4:43337826-43337845 Msa1155390:intron 35.0%
AAAGGTCAAGTAATATGGGA+CGG - chr7_4:43338067-43338086 None:intergenic 35.0%
GTCAACTAGGTCAAGTAATA+TGG + chr7_4:43338283-43338302 Msa1155390:intron 35.0%
GTCAGCCAGACATTAATTAA+AGG + chr7_4:43338332-43338351 Msa1155390:intron 35.0%
GAAAATACTTGAATGGACCA+GGG + chr7_4:43338355-43338374 Msa1155390:intron 35.0%
TCTCTTCTCTCTCATTTCTT+TGG - chr7_4:43338406-43338425 None:intergenic 35.0%
GTTCTTTATCTTGTGCCTTA+AGG - chr7_4:43338573-43338592 None:intergenic 35.0%
GACAATAATTTAGAGACGGA+GGG + chr7_4:43338849-43338868 Msa1155390:intron 35.0%
CAAGATAAGGAACCCAAAAA+TGG - chr7_4:43338962-43338981 None:intergenic 35.0%
! TTTTCTTCCTCAGGAGTAAA+GGG - chr7_4:43339113-43339132 None:intergenic 35.0%
! TTTTTCTTCCTCAGGAGTAA+AGG - chr7_4:43339114-43339133 None:intergenic 35.0%
TTCATGCTATCCTTGGAAAT+AGG + chr7_4:43339147-43339166 Msa1155390:CDS 35.0%
GAACTGTTTACCTATTTCCA+AGG - chr7_4:43339160-43339179 None:intergenic 35.0%
TTTCACAACCACAAAATGAG+TGG - chr7_4:43339379-43339398 None:intergenic 35.0%
!! AAGAGCTCTACTTTTATGCT+CGG + chr7_4:43339615-43339634 Msa1155390:intron 35.0%
GATCAACTCAACACATTTGT+AGG - chr7_4:43339762-43339781 None:intergenic 35.0%
GACACAACAGTAGCATTTAT+TGG - chr7_4:43339784-43339803 None:intergenic 35.0%
TATCTCATTGTCTGTTCTTC+CGG - chr7_4:43340037-43340056 None:intergenic 35.0%
TAACTAGTTAATGAGGCTAC+CGG - chr7_4:43340129-43340148 None:intergenic 35.0%
!! ATGCGTGTGACTTGTTATTT+GGG - chr7_4:43340152-43340171 None:intergenic 35.0%
AAATAACAAGTCACACGCAT+CGG + chr7_4:43340152-43340171 Msa1155390:CDS 35.0%
!! GGAAGAATCGATTTTTGTGA+AGG - chr7_4:43340274-43340293 None:intergenic 35.0%
TATACGGAGAAAGTAATCAG+AGG - chr7_4:43340295-43340314 None:intergenic 35.0%
CTGATTACTTTCTCCGTATA+TGG + chr7_4:43340295-43340314 Msa1155390:CDS 35.0%
CAACTTCAGAGTTCCATATA+CGG - chr7_4:43340311-43340330 None:intergenic 35.0%
GATAATGATCCTGCAGAAAT+TGG - chr7_4:43340405-43340424 None:intergenic 35.0%
AGAAATGGAGTCACATTTGT+TGG - chr7_4:43340430-43340449 None:intergenic 35.0%
TTGTGAATGAAGAGTTGGAT+TGG + chr7_4:43340472-43340491 Msa1155390:CDS 35.0%
TGATGAATCTTGCAAGTCAT+TGG - chr7_4:43340553-43340572 None:intergenic 35.0%
AAGCTCATGTCATTGTTCAT+AGG - chr7_4:43340606-43340625 None:intergenic 35.0%
AACAATGACATGAGCTTCTT+AGG + chr7_4:43340609-43340628 Msa1155390:CDS 35.0%
! GACACCTTGTTGTGATAAGA+AGG + chr7_4:43336297-43336316 Msa1155390:CDS 40.0%
TTAGAACAAAAGTGGGGTCA+TGG + chr7_4:43336986-43337005 Msa1155390:intron 40.0%
GGGAAGAAAGTTCCTATCTT+TGG + chr7_4:43337016-43337035 Msa1155390:intron 40.0%
AAGGACTCTTGAACATGTGA+AGG + chr7_4:43337101-43337120 Msa1155390:intron 40.0%
AGGACTCTTGAACATGTGAA+GGG + chr7_4:43337102-43337121 Msa1155390:intron 40.0%
GACAAGGAGTTAAGAGTGAT+AGG - chr7_4:43337130-43337149 None:intergenic 40.0%
GAGAAGGGAGACTTCATTTA+AGG - chr7_4:43337364-43337383 None:intergenic 40.0%
TAACGTAAGAAATCCGAGTC+GGG + chr7_4:43337427-43337446 Msa1155390:intron 40.0%
TGCTTATATTTCGGGACAGA+GGG - chr7_4:43337494-43337513 None:intergenic 40.0%
TTGCTTATATTTCGGGACAG+AGG - chr7_4:43337495-43337514 None:intergenic 40.0%
TTGAATCATTGTTTGGCACG+TGG - chr7_4:43337955-43337974 None:intergenic 40.0%
CTAGGTCAAGTAATATGGGA+CGG + chr7_4:43338288-43338307 Msa1155390:intron 40.0%
GGAAAATACTTGAATGGACC+AGG + chr7_4:43338354-43338373 Msa1155390:intron 40.0%
TTTGGTTGTGACCACACAAT+GGG - chr7_4:43338388-43338407 None:intergenic 40.0%
GAGAGAGAAGAGAGAGAAAA+TGG + chr7_4:43338413-43338432 Msa1155390:intron 40.0%
! AATGCTAACTTGTGCCCTTA+AGG + chr7_4:43338555-43338574 Msa1155390:intron 40.0%
GACTATTATTGTGAGACGGA+GGG - chr7_4:43338606-43338625 None:intergenic 40.0%
AGACTATTATTGTGAGACGG+AGG - chr7_4:43338607-43338626 None:intergenic 40.0%
AGGTTTGTGCACGGTTATTA+AGG - chr7_4:43338824-43338843 None:intergenic 40.0%
! TGTCGTTTAAGGTTTGTGCA+CGG - chr7_4:43338833-43338852 None:intergenic 40.0%
CGACAATAATTTAGAGACGG+AGG + chr7_4:43338848-43338867 Msa1155390:intron 40.0%
TTCCTTATCTTGTGCCCTAA+GGG + chr7_4:43338970-43338989 Msa1155390:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr7_4:43338987-43339006 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr7_4:43338988-43339007 None:intergenic 40.0%
! AATGTCAGGTCTGAGATAGT+TGG - chr7_4:43339081-43339100 None:intergenic 40.0%
ATTCAGCTTCATGCTATCCT+TGG + chr7_4:43339140-43339159 Msa1155390:CDS 40.0%
! CATGAGATCCACTCATTTTG+TGG + chr7_4:43339368-43339387 Msa1155390:intron 40.0%
ATTTGATGTCTCTGCAACTG+CGG - chr7_4:43339812-43339831 None:intergenic 40.0%
AAAGTATGAAACCGCCATCT+TGG - chr7_4:43339850-43339869 None:intergenic 40.0%
ATCTCATTGTCTGTTCTTCC+GGG - chr7_4:43340036-43340055 None:intergenic 40.0%
AAGAAACGTCTCAAAAGCCT+GGG + chr7_4:43340081-43340100 Msa1155390:CDS 40.0%
!!! GTGTTTTTGGATCAATTCCC+AGG - chr7_4:43340101-43340120 None:intergenic 40.0%
TGATCCAAAAACACATGAGC+CGG + chr7_4:43340107-43340126 Msa1155390:CDS 40.0%
!! GATGCGTGTGACTTGTTATT+TGG - chr7_4:43340153-43340172 None:intergenic 40.0%
!! CGTATATGGAACTCTGAAGT+TGG + chr7_4:43340309-43340328 Msa1155390:CDS 40.0%
AGGGTTTGAAGAAAGGACCT+TGG + chr7_4:43336317-43336336 Msa1155390:CDS 45.0%
AAAATGGTGGTCATGGAAGC+TGG + chr7_4:43336380-43336399 Msa1155390:CDS 45.0%
TATTTGAGCGAAACCCGACT+CGG - chr7_4:43337443-43337462 None:intergenic 45.0%
GTCAAGTAATATGGGACGGA+TGG - chr7_4:43338292-43338311 None:intergenic 45.0%
CATACGTGACAGAGTCAACT+AGG + chr7_4:43338270-43338289 Msa1155390:intron 45.0%
GTCAAGTAATATGGGACGGA+GGG + chr7_4:43338292-43338311 Msa1155390:intron 45.0%
TTGGTTGTGACCACACAATG+GGG - chr7_4:43338387-43338406 None:intergenic 45.0%
CTTTGGTTGTGACCACACAA+TGG - chr7_4:43338389-43338408 None:intergenic 45.0%
TGTGACCAAACCCAATTGTG+TGG + chr7_4:43338468-43338487 Msa1155390:intron 45.0%
GTTCCTTATCTTGTGCCCTA+AGG + chr7_4:43338969-43338988 Msa1155390:intron 45.0%
TTCGCTGTGGTAAGAGTTGT+AGG + chr7_4:43339045-43339064 Msa1155390:CDS 45.0%
GTGGTAAGAGTTGTAGGCTT+AGG + chr7_4:43339051-43339070 Msa1155390:CDS 45.0%
GTAAGAGTTGTAGGCTTAGG+TGG + chr7_4:43339054-43339073 Msa1155390:CDS 45.0%
CTCAGACCTGACATTAAACG+TGG + chr7_4:43339086-43339105 Msa1155390:CDS 45.0%
AAGGGTCCACGTTTAATGTC+AGG - chr7_4:43339095-43339114 None:intergenic 45.0%
CTTTGATGTCGTGACCAAGA+TGG + chr7_4:43339833-43339852 Msa1155390:intron 45.0%
GCAATTGCATCTCAGTTACC+CGG + chr7_4:43340015-43340034 Msa1155390:CDS 45.0%
GAAGAAACGTCTCAAAAGCC+TGG + chr7_4:43340080-43340099 Msa1155390:CDS 45.0%
! ATCGGTTTCAACACGTCACA+TGG + chr7_4:43340170-43340189 Msa1155390:CDS 45.0%
AACACGTCACATGGCTCAAT+GGG + chr7_4:43340179-43340198 Msa1155390:CDS 45.0%
AGTTGGAGATGCATTTCGCA+AGG + chr7_4:43340326-43340345 Msa1155390:CDS 45.0%
TGTCAGAGTCCAATTTCTGC+AGG + chr7_4:43340393-43340412 Msa1155390:CDS 45.0%
!! AAAATATATAATAATACTAA+GGG - chr7_4:43339011-43339030 None:intergenic 5.0%
!! TAAAATATATAATAATACTA+AGG - chr7_4:43339012-43339031 None:intergenic 5.0%
TCATCCTCTTCAGCAGTCCA+AGG - chr7_4:43336337-43336356 None:intergenic 50.0%
CGTTCTCTTCCCAAGATCAC+AGG + chr7_4:43336403-43336422 Msa1155390:CDS 50.0%
CACCGAGTTTGGCGAAATCA+CGG + chr7_4:43336606-43336625 Msa1155390:intron 50.0%
CACCGTGATTTCGCCAAACT+CGG - chr7_4:43336611-43336630 None:intergenic 50.0%
AAAGTGGGGTCATGGTGTGA+AGG + chr7_4:43336994-43337013 Msa1155390:intron 50.0%
AAGTGGGGTCATGGTGTGAA+GGG + chr7_4:43336995-43337014 Msa1155390:intron 50.0%
GGTCAAGTAATATGGGACGG+AGG + chr7_4:43338291-43338310 Msa1155390:intron 50.0%
TGTGACCACACAATGGGGTT+TGG - chr7_4:43338382-43338401 None:intergenic 50.0%
CAGGACCACACAATTGGGTT+TGG - chr7_4:43338476-43338495 None:intergenic 50.0%
CAAACCCAATTGTGTGGTCC+TGG + chr7_4:43338474-43338493 Msa1155390:intron 50.0%
TGGACCAGGACCACACAATT+GGG - chr7_4:43338481-43338500 None:intergenic 50.0%
GAGAAAGACTTGTGTGGACC+AGG - chr7_4:43338495-43338514 None:intergenic 50.0%
! TGAGACGGAGGGAGTATGTT+AGG - chr7_4:43338595-43338614 None:intergenic 50.0%
TGCCCTTAGGGCACAAGATA+AGG - chr7_4:43338975-43338994 None:intergenic 50.0%
! CTTTCAGGTCTTCTTCGCTG+TGG + chr7_4:43339032-43339051 Msa1155390:intron 50.0%
TGATGTCGTGACCAAGATGG+CGG + chr7_4:43339836-43339855 Msa1155390:intron 50.0%
!!! GCTACCGGCTCATGTGTTTT+TGG - chr7_4:43340114-43340133 None:intergenic 50.0%
CAACACGTCACATGGCTCAA+TGG + chr7_4:43340178-43340197 Msa1155390:CDS 50.0%
GCTCGCTGTAACAGCAGAAA+TGG - chr7_4:43340445-43340464 None:intergenic 50.0%
AGGACCTTGGACTGCTGAAG+AGG + chr7_4:43336330-43336349 Msa1155390:CDS 55.0%
AGTGGGGTCATGGTGTGAAG+GGG + chr7_4:43336996-43337015 Msa1155390:intron 55.0%
! ACACAATGGGGTTTGGTCCC+TGG - chr7_4:43338375-43338394 None:intergenic 55.0%
AGGGACCAAACCCCATTGTG+TGG + chr7_4:43338374-43338393 Msa1155390:intron 55.0%
GTGGACCAGGACCACACAAT+TGG - chr7_4:43338482-43338501 None:intergenic 55.0%
ACGTGGACCCTTTACTCCTG+AGG + chr7_4:43339103-43339122 Msa1155390:CDS 55.0%
! TGGCTCAATGGGAGAGTGCA+AGG + chr7_4:43340190-43340209 Msa1155390:CDS 55.0%
TGTCTCTGCAACTGCGGTCG+AGG - chr7_4:43339806-43339825 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 43336289 43340656 43336289 ID=Msa1155390;Name=Msa1155390
chr7_4 mRNA 43336289 43340656 43336289 ID=Msa1155390-mRNA-1;Parent=Msa1155390;Name=Msa1155390-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.33|1|1|1|3|0|304
chr7_4 exon 43336289 43336424 43336289 ID=Msa1155390-mRNA-1:exon:10856;Parent=Msa1155390-mRNA-1
chr7_4 exon 43339039 43339168 43339039 ID=Msa1155390-mRNA-1:exon:10857;Parent=Msa1155390-mRNA-1
chr7_4 exon 43340008 43340656 43340008 ID=Msa1155390-mRNA-1:exon:10858;Parent=Msa1155390-mRNA-1
chr7_4 CDS 43336289 43336424 43336289 ID=Msa1155390-mRNA-1:cds;Parent=Msa1155390-mRNA-1
chr7_4 CDS 43339039 43339168 43339039 ID=Msa1155390-mRNA-1:cds;Parent=Msa1155390-mRNA-1
chr7_4 CDS 43340008 43340656 43340008 ID=Msa1155390-mRNA-1:cds;Parent=Msa1155390-mRNA-1
Gene Sequence

>Msa1155390

ATGGGAAGGACACCTTGTTGTGATAAGAAGGGTTTGAAGAAAGGACCTTGGACTGCTGAAGAGGATGAAATTCTTGCTAACTATATTAAGAAAAATGGTGGTCATGGAAGCTGGCGTTCTCTTCCCAAGATCACAGGTCTTCTTCGCTGTGGTAAGAGTTGTAGGCTTAGGTGGACCAACTATCTCAGACCTGACATTAAACGTGGACCCTTTACTCCTGAGGAAGAAAAATTAGTCATTCAGCTTCATGCTATCCTTGGAAATAGGTGGGCTGCAATTGCATCTCAGTTACCCGGAAGAACAGACAATGAGATAAAGAACTTTTGGAACACGCATTTGAAGAAACGTCTCAAAAGCCTGGGAATTGATCCAAAAACACATGAGCCGGTAGCCTCATTAACTAGTTACCCAAATAACAAGTCACACGCATCGGTTTCAACACGTCACATGGCTCAATGGGAGAGTGCAAGGCTTGAAGCAGAAGCAAGACTCTCAATTGAGTCATCACACTTCAACAACAATCCTAATTCCTTCACAAAAATCGATTCTTCCTCTGATTACTTTCTCCGTATATGGAACTCTGAAGTTGGAGATGCATTTCGCAAGGTTCAAAAACCAGATACAGATCATACTAACATAATCACTAGTTGCTGTCAGAGTCCAATTTCTGCAGGATCATTATCTTCCAACAAATGTGACTCCATTTCTGCTGTTACAGCGAGCAATAGTATTGTGAATGAAGAGTTGGATTGGAAGAACTACAAGTTTTGTGCTGAAGATGTGATTCTTGAATCTGATTCATCAAGCTCCAATGACTTGCAAGATTCATCAGACACTGCTTTGCAGCTCTTGTTTGATTTTCCTATGAACAATGACATGAGCTTCTTAGGAAACTCTTTTGCTTCTCCCTTTTAG
Protein sequence

>Msa1155390

MGRTPCCDKKGLKKGPWTAEEDEILANYIKKNGGHGSWRSLPKITGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHAILGNRWAAIASQLPGRTDNEIKNFWNTHLKKRLKSLGIDPKTHEPVASLTSYPNNKSHASVSTRHMAQWESARLEAEARLSIESSHFNNNPNSFTKIDSSSDYFLRIWNSEVGDAFRKVQKPDTDHTNIITSCCQSPISAGSLSSNKCDSISAVTASNSIVNEELDWKNYKFCAEDVILESDSSSSNDLQDSSDTALQLLFDFPMNNDMSFLGNSFASPF*