Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156410 | XP_003624234.1 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 2.75e-80 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156410 | sp|P53665|ACPM1_ARATH | 74.590 | 122 | 28 | 1 | 1 | 119 | 1 | 122 | 2.96e-61 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156410 | G7KSG3 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 1.31e-80 | 241 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1029410 | Msa1156410 | 0.967153 | 6.906144e-127 | -8.615850e-47 |
| Msa1115590 | Msa1156410 | 0.815996 | 6.942299e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156410 | MtrunA17_Chr7g0249801 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 2.53e-84 | 241 |
| Msa1156410 | MtrunA17_Chr7g0249561 | 52.066 | 121 | 48 | 3 | 7 | 118 | 10 | 129 | 1.71e-35 | 118 |
| Msa1156410 | MtrunA17_Chr4g0076301 | 50.000 | 74 | 37 | 0 | 43 | 116 | 47 | 120 | 3.70e-21 | 82.0 |
| Msa1156410 | MtrunA17_Chr8g0385881 | 45.833 | 72 | 37 | 2 | 42 | 112 | 61 | 131 | 1.17e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156410 | AT2G44620.1 | 74.590 | 122 | 28 | 1 | 1 | 119 | 1 | 122 | 3.01e-62 | 186 |
| Msa1156410 | AT1G65290.1 | 52.800 | 125 | 52 | 3 | 1 | 118 | 1 | 125 | 3.65e-39 | 127 |
| Msa1156410 | AT5G47630.1 | 39.167 | 120 | 62 | 3 | 2 | 112 | 3 | 120 | 1.71e-23 | 88.2 |
| Msa1156410 | AT5G47630.2 | 39.167 | 120 | 62 | 3 | 2 | 112 | 3 | 120 | 1.71e-23 | 88.2 |
| Msa1156410 | AT5G47630.3 | 39.167 | 120 | 62 | 3 | 2 | 112 | 3 | 120 | 1.71e-23 | 88.2 |
| Msa1156410 | AT3G05020.1 | 35.772 | 123 | 66 | 5 | 1 | 112 | 9 | 129 | 1.02e-12 | 60.8 |
Find 47 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTCCATGGTTGCAATTT+TGG | 0.036240 | 7_4:-44683292 | None:intergenic |
| CTGTTTCTCTTTGTTCTCTT+TGG | 0.085986 | 7_4:-44683190 | None:intergenic |
| CACTGGATGTTTCTTGAATC+TGG | 0.153785 | 7_4:+44688105 | Msa1156410:three_prime_UTR |
| AATAAAATTTGATTCCATTT+TGG | 0.162606 | 7_4:+44688349 | Msa1156410:three_prime_UTR |
| CAATGTGTCTTCTTCCAATT+TGG | 0.189214 | 7_4:+44688044 | Msa1156410:three_prime_UTR |
| TCCTTCTGAAAATGCACTTC+TGG | 0.273315 | 7_4:-44687866 | None:intergenic |
| GTTGGTTGTTGAAAATAATA+TGG | 0.278667 | 7_4:+44688176 | Msa1156410:three_prime_UTR |
| TCGCTCGACGACTTCTTCTT+TGG | 0.278783 | 7_4:-44683353 | None:intergenic |
| ACCTTTGAAGGATCCACTTT+GGG | 0.302737 | 7_4:-44683400 | None:intergenic |
| CCTTTCAAATTGAAGTGAAA+TGG | 0.303616 | 7_4:+44688153 | Msa1156410:three_prime_UTR |
| AGTTTAACATGAAACCAAAT+TGG | 0.375430 | 7_4:-44688058 | None:intergenic |
| CTTTCAAATTGAAGTGAAAT+GGG | 0.384295 | 7_4:+44688154 | Msa1156410:three_prime_UTR |
| GTGCAACCTTTACCTTTCAC+TGG | 0.428616 | 7_4:+44688088 | Msa1156410:three_prime_UTR |
| GACCTTTGAAGGATCCACTT+TGG | 0.440505 | 7_4:-44683401 | None:intergenic |
| CCATTTCACTTCAATTTGAA+AGG | 0.456015 | 7_4:-44688153 | None:intergenic |
| AACAACAACGGGATATTTGA+AGG | 0.479826 | 7_4:+44688229 | Msa1156410:three_prime_UTR |
| ACTTCAATTTGAAAGGGTAA+AGG | 0.480133 | 7_4:-44688146 | None:intergenic |
| GTTTAGTGAAGAACAACAAC+GGG | 0.488674 | 7_4:+44688218 | Msa1156410:three_prime_UTR |
| CATTTCACTTCAATTTGAAA+GGG | 0.499913 | 7_4:-44688152 | None:intergenic |
| TGGTTAACTTTAACTAGACA+TGG | 0.501499 | 7_4:-44688023 | None:intergenic |
| CAAATTGAAGTGAAATGGGT+TGG | 0.517665 | 7_4:+44688158 | Msa1156410:three_prime_UTR |
| CCAAAATTGCAACCATGGAA+TGG | 0.528696 | 7_4:+44683292 | Msa1156410:CDS |
| CATCAAAGATTTCCCCAAAG+TGG | 0.529509 | 7_4:+44683387 | Msa1156410:CDS |
| AAACATCCAGTGAAAGGTAA+AGG | 0.535950 | 7_4:-44688094 | None:intergenic |
| AACTTTAACTAGACATGGGG+TGG | 0.538621 | 7_4:-44688018 | None:intergenic |
| AATTGTAATGGCACTAGAAG+AGG | 0.554350 | 7_4:+44687919 | Msa1156410:CDS |
| GGAAAAGAAGAGACCTTTGA+AGG | 0.554440 | 7_4:-44683412 | None:intergenic |
| CCCCAAAGTGGATCCTTCAA+AGG | 0.560245 | 7_4:+44683399 | Msa1156410:CDS |
| TTCAAGAAACATCCAGTGAA+AGG | 0.564170 | 7_4:-44688100 | None:intergenic |
| GGTTAACTTTAACTAGACAT+GGG | 0.571888 | 7_4:-44688022 | None:intergenic |
| CCACTCCAAAATTGCAACCA+TGG | 0.573313 | 7_4:+44683287 | Msa1156410:CDS |
| AGACAACGTCGAAATTGTAA+TGG | 0.575478 | 7_4:+44687907 | Msa1156410:CDS |
| CCTTTGAAGGATCCACTTTG+GGG | 0.579115 | 7_4:-44683399 | None:intergenic |
| GTGTGAAGACATGGATCGAA+TGG | 0.579224 | 7_4:-44683317 | None:intergenic |
| TGATGGAGCTTGTCATGATG+AGG | 0.583494 | 7_4:+44688308 | Msa1156410:three_prime_UTR |
| GATCGAATGGAACCATTCCA+TGG | 0.588611 | 7_4:-44683304 | None:intergenic |
| ATGATCGTCGTGTGAAGACA+TGG | 0.594790 | 7_4:-44683326 | None:intergenic |
| TGCGTAAGAAACAGTGCTGA+TGG | 0.601698 | 7_4:+44688291 | Msa1156410:three_prime_UTR |
| ACTAGAAGAGGAGTTCAAGC+TGG | 0.603683 | 7_4:+44687931 | Msa1156410:CDS |
| GTTAACTTTAACTAGACATG+GGG | 0.611897 | 7_4:-44688021 | None:intergenic |
| CAAGCTGGAAATCCCAGACA+AGG | 0.616529 | 7_4:+44687946 | Msa1156410:CDS |
| CAAATTGGAAGAAGACACAT+TGG | 0.621146 | 7_4:-44688043 | None:intergenic |
| ACAACAACGGGATATTTGAA+GGG | 0.643603 | 7_4:+44688230 | Msa1156410:three_prime_UTR |
| ATTGGATTGGAATACGAACA+TGG | 0.646342 | 7_4:-44683264 | None:intergenic |
| TGTTTAGTGAAGAACAACAA+CGG | 0.679038 | 7_4:+44688217 | Msa1156410:three_prime_UTR |
| GGAAATCTTTGATGACAGAG+AGG | 0.687548 | 7_4:-44683378 | None:intergenic |
| GGATTGGAATACGAACATGG+CGG | 0.826355 | 7_4:-44683261 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTAAAAAAAATATTTT+GGG | - | chr7_4:44686591-44686610 | None:intergenic | 0.0% |
| !!! | ATATATTAAAAAAAATATTT+TGG | - | chr7_4:44686592-44686611 | None:intergenic | 0.0% |
| !!! | TTTAATGTTATTTTCTAAAT+GGG | + | chr7_4:44684678-44684697 | Msa1156410:intron | 10.0% |
| !! | ATGGAAAATATATAATAAAT+TGG | + | chr7_4:44684874-44684893 | Msa1156410:intron | 10.0% |
| !!! | ATTTAACATATTACATATTT+TGG | - | chr7_4:44685637-44685656 | None:intergenic | 10.0% |
| !!! | ATAAAACATTATTTTTTTAG+GGG | + | chr7_4:44686908-44686927 | Msa1156410:intron | 10.0% |
| !! | AATGAAAATAAAAATTTAAG+AGG | - | chr7_4:44687662-44687681 | None:intergenic | 10.0% |
| !!! | TCTTAAATTTTTATTTTCAT+TGG | + | chr7_4:44687661-44687680 | Msa1156410:intron | 10.0% |
| ! | GGCGGGGGGGGGGGGGGGGG+GGG | + | chr7_4:44685457-44685476 | Msa1156410:intron | 100.0% |
| ! | GCGGGGGGGGGGGGGGGGGG+GGG | + | chr7_4:44685458-44685477 | Msa1156410:intron | 100.0% |
| !! | AATCAACAAAATAACAATTT+GGG | - | chr7_4:44683718-44683737 | None:intergenic | 15.0% |
| !! | AAATCAACAAAATAACAATT+TGG | - | chr7_4:44683719-44683738 | None:intergenic | 15.0% |
| !!! | TATTTATATCTTTTTATTCC+CGG | - | chr7_4:44684065-44684084 | None:intergenic | 15.0% |
| !! | ATAAAAATAGGGATTATAAT+AGG | - | chr7_4:44684225-44684244 | None:intergenic | 15.0% |
| !!! | TATTATAATCCCTATTTTTA+TGG | + | chr7_4:44684224-44684243 | Msa1156410:intron | 15.0% |
| !!! | CTTTAATGTTATTTTCTAAA+TGG | + | chr7_4:44684677-44684696 | Msa1156410:intron | 15.0% |
| !! | AAAAGTTCAAATATTACTTT+GGG | - | chr7_4:44685509-44685528 | None:intergenic | 15.0% |
| !! | CTTCATATATATTTGAAAAT+GGG | + | chr7_4:44685934-44685953 | Msa1156410:intron | 15.0% |
| !!! | TAACATTTTCTCAAATTAAA+TGG | + | chr7_4:44686021-44686040 | Msa1156410:intron | 15.0% |
| !! | AAGACAATTGTAAATTTAAA+AGG | + | chr7_4:44686251-44686270 | Msa1156410:intron | 15.0% |
| !! | ATATAAAGATTTCAATAGAT+GGG | - | chr7_4:44686312-44686331 | None:intergenic | 15.0% |
| !! | TATATAAAGATTTCAATAGA+TGG | - | chr7_4:44686313-44686332 | None:intergenic | 15.0% |
| !!! | ATTTATTCTTTTATCTCTTT+TGG | + | chr7_4:44686759-44686778 | Msa1156410:intron | 15.0% |
| !!! | TTTATTCTTTTATCTCTTTT+GGG | + | chr7_4:44686760-44686779 | Msa1156410:intron | 15.0% |
| !! | AGTATATAAAAGTTGAAATT+GGG | + | chr7_4:44687464-44687483 | Msa1156410:intron | 15.0% |
| !! | TGCAGATAATTTATATTTAT+GGG | + | chr7_4:44687821-44687840 | Msa1156410:intron | 15.0% |
| !! | ATTTATATTTATGGGTTTAA+TGG | + | chr7_4:44687829-44687848 | Msa1156410:intron | 15.0% |
| !! | AAAAAAATTCAAAACATAAC+AGG | - | chr7_4:44688267-44688286 | None:intergenic | 15.0% |
| !! | AAACATTATGCAAAAATGAA+GGG | - | chr7_4:44683445-44683464 | None:intergenic | 20.0% |
| !! | TAAACATTATGCAAAAATGA+AGG | - | chr7_4:44683446-44683465 | None:intergenic | 20.0% |
| !! | AAATCAACAGAATAACAATT+AGG | - | chr7_4:44683514-44683533 | None:intergenic | 20.0% |
| !! | GTGAAAAAAAAATGAGTAAT+AGG | + | chr7_4:44683565-44683584 | Msa1156410:intron | 20.0% |
| !! | AATTTACCTTAATAACTATC+TGG | + | chr7_4:44683643-44683662 | Msa1156410:intron | 20.0% |
| !! | ATTTACCTTAATAACTATCT+GGG | + | chr7_4:44683644-44683663 | Msa1156410:intron | 20.0% |
| !!! | ATTTATATCTTTTTATTCCC+GGG | - | chr7_4:44684064-44684083 | None:intergenic | 20.0% |
| !!! | AGTTTACTAAATTTTTTTCC+TGG | + | chr7_4:44684106-44684125 | Msa1156410:intron | 20.0% |
| !!! | GTTTACTAAATTTTTTTCCT+GGG | + | chr7_4:44684107-44684126 | Msa1156410:intron | 20.0% |
| !! | TTTAACATTATAATATTCCC+GGG | - | chr7_4:44684252-44684271 | None:intergenic | 20.0% |
| !! | GTTTAACATTATAATATTCC+CGG | - | chr7_4:44684253-44684272 | None:intergenic | 20.0% |
| !!! | TTCAAAATATTGAGTTGAAA+TGG | + | chr7_4:44684855-44684874 | Msa1156410:intron | 20.0% |
| !! | GAAAAGTTCAAATATTACTT+TGG | - | chr7_4:44685510-44685529 | None:intergenic | 20.0% |
| !!! | GTTGTTTCAACTTAAATAAA+TGG | - | chr7_4:44685551-44685570 | None:intergenic | 20.0% |
| !! | TTGTAATTAAAAGTGAAAAC+AGG | - | chr7_4:44685824-44685843 | None:intergenic | 20.0% |
| !!! | TTGTTTTTAAGGATTTGTAT+TGG | + | chr7_4:44685873-44685892 | Msa1156410:intron | 20.0% |
| !!! | ACAAAAAATAGTTATTTTCC+CGG | - | chr7_4:44685902-44685921 | None:intergenic | 20.0% |
| !!! | CCATTTTCAAATATATATGA+AGG | - | chr7_4:44685936-44685955 | None:intergenic | 20.0% |
| !! | CCTTCATATATATTTGAAAA+TGG | + | chr7_4:44685933-44685952 | Msa1156410:intron | 20.0% |
| !! | TACAATTGTCTTAAATCATT+TGG | - | chr7_4:44686243-44686262 | None:intergenic | 20.0% |
| !! | TATAAAGATTTCAATAGATG+GGG | - | chr7_4:44686311-44686330 | None:intergenic | 20.0% |
| !! | AATACTAGTAAATGTATTGT+TGG | - | chr7_4:44686425-44686444 | None:intergenic | 20.0% |
| !! | CAGTATATAAAAGTTGAAAT+TGG | + | chr7_4:44687463-44687482 | Msa1156410:intron | 20.0% |
| !! | GTGCAGATAATTTATATTTA+TGG | + | chr7_4:44687820-44687839 | Msa1156410:intron | 20.0% |
| ! | TGGTGTTTGTAATAATGTTA+AGG | + | chr7_4:44683667-44683686 | Msa1156410:intron | 25.0% |
| ! | TTTGTGTGGAAAATTAGAAA+TGG | + | chr7_4:44683799-44683818 | Msa1156410:intron | 25.0% |
| ! | TTGTGTGGAAAATTAGAAAT+GGG | + | chr7_4:44683800-44683819 | Msa1156410:intron | 25.0% |
| !!! | TTACGTTGATTTTTCCAAAT+GGG | + | chr7_4:44683836-44683855 | Msa1156410:intron | 25.0% |
| !!! | CTCTGAAAGTTTTAGATTTA+GGG | + | chr7_4:44683862-44683881 | Msa1156410:intron | 25.0% |
| !!! | ATCAGCTTATTTGTTATTTG+AGG | + | chr7_4:44683894-44683913 | Msa1156410:intron | 25.0% |
| !! | TTTTCATAAGTTCTCTCAAA+CGG | - | chr7_4:44683973-44683992 | None:intergenic | 25.0% |
| ! | AAGTTATATTTGTAGATTCC+CGG | + | chr7_4:44684043-44684062 | Msa1156410:intron | 25.0% |
| ! | AAAAAATTTCCCAAGGAAAT+GGG | + | chr7_4:44684152-44684171 | Msa1156410:intron | 25.0% |
| !!! | CATCTTTTTTCTATATACCT+TGG | + | chr7_4:44684276-44684295 | Msa1156410:intron | 25.0% |
| ! | GTTATTCCTAGGAATAAATT+TGG | + | chr7_4:44684331-44684350 | Msa1156410:intron | 25.0% |
| ! | AGTTTACCAAATTTATTCCT+AGG | - | chr7_4:44684340-44684359 | None:intergenic | 25.0% |
| ! | TTAAGCTGTTTATTCAAACA+AGG | + | chr7_4:44684476-44684495 | Msa1156410:intron | 25.0% |
| !! | ATTTTGTAGGAAAAACTAGA+TGG | + | chr7_4:44684625-44684644 | Msa1156410:intron | 25.0% |
| ! | ATGAAAGTAACACTTCTTTA+AGG | - | chr7_4:44685078-44685097 | None:intergenic | 25.0% |
| !!! | AGCTGATGAGTTTTTTTATT+TGG | - | chr7_4:44685118-44685137 | None:intergenic | 25.0% |
| ! | AAGGAAAAAAGTAGAAAACT+AGG | - | chr7_4:44685420-44685439 | None:intergenic | 25.0% |
| !!! | AGTTTTCTACTTTTTTCCTT+TGG | + | chr7_4:44685420-44685439 | Msa1156410:intron | 25.0% |
| !!! | GTTTTCTACTTTTTTCCTTT+GGG | + | chr7_4:44685421-44685440 | Msa1156410:intron | 25.0% |
| !! | AAATATTACTTTGGGAACAA+TGG | - | chr7_4:44685501-44685520 | None:intergenic | 25.0% |
| !! | CAAGATTTGTTCATTGTATA+AGG | + | chr7_4:44685584-44685603 | Msa1156410:intron | 25.0% |
| ! | ATTCCCAAACTTAGATAATT+AGG | + | chr7_4:44685655-44685674 | Msa1156410:intron | 25.0% |
| ! | TTCCCAAACTTAGATAATTA+GGG | + | chr7_4:44685656-44685675 | Msa1156410:intron | 25.0% |
| ! | TACCCTAATTATCTAAGTTT+GGG | - | chr7_4:44685661-44685680 | None:intergenic | 25.0% |
| ! | ATACCCTAATTATCTAAGTT+TGG | - | chr7_4:44685662-44685681 | None:intergenic | 25.0% |
| !!! | ACGTTGTTTCTTTGTTTTTA+AGG | + | chr7_4:44685862-44685881 | Msa1156410:intron | 25.0% |
| ! | AATATATATGAAGGCAACAA+CGG | - | chr7_4:44685927-44685946 | None:intergenic | 25.0% |
| !! | TTTTAAGCATATGTAGAAAC+TGG | + | chr7_4:44686125-44686144 | Msa1156410:intron | 25.0% |
| ! | TTCAAATAAATGAATCTCCT+GGG | - | chr7_4:44686158-44686177 | None:intergenic | 25.0% |
| ! | TTTCAAATAAATGAATCTCC+TGG | - | chr7_4:44686159-44686178 | None:intergenic | 25.0% |
| ! | ACATAAGCCAAATTACAAAT+AGG | + | chr7_4:44686183-44686202 | Msa1156410:intron | 25.0% |
| ! | TGTCTTAAATCATTTGGTAA+CGG | - | chr7_4:44686237-44686256 | None:intergenic | 25.0% |
| !! | AAATTTAAAAGGCTCTGTTT+TGG | + | chr7_4:44686262-44686281 | Msa1156410:intron | 25.0% |
| !! | TTATATAGACACTTCGTTTT+CGG | + | chr7_4:44686326-44686345 | Msa1156410:intron | 25.0% |
| ! | AGTTATACATGATAAGAACA+GGG | + | chr7_4:44686509-44686528 | Msa1156410:intron | 25.0% |
| ! | AATGACATTTGCCATTATAT+GGG | - | chr7_4:44686727-44686746 | None:intergenic | 25.0% |
| ! | AAATGACATTTGCCATTATA+TGG | - | chr7_4:44686728-44686747 | None:intergenic | 25.0% |
| !! | TCTTTTGGGCATAATTTTAA+TGG | + | chr7_4:44686774-44686793 | Msa1156410:intron | 25.0% |
| !!! | GCATAATTTTAATGGATTTG+AGG | + | chr7_4:44686782-44686801 | Msa1156410:intron | 25.0% |
| ! | AATAACTGTTTATCCAAACA+AGG | - | chr7_4:44687165-44687184 | None:intergenic | 25.0% |
| ! | ATAAAGGTGAAAACAGTTTA+TGG | + | chr7_4:44687309-44687328 | Msa1156410:intron | 25.0% |
| ! | CATACATTTAAAAAAACAGC+AGG | + | chr7_4:44687494-44687513 | Msa1156410:intron | 25.0% |
| !!! | TTTTTAATTCTTTTGAGCAC+AGG | + | chr7_4:44687608-44687627 | Msa1156410:intron | 25.0% |
| ! | AGTTTAACATGAAACCAAAT+TGG | - | chr7_4:44688061-44688080 | None:intergenic | 25.0% |
| ! | CATTTCACTTCAATTTGAAA+GGG | - | chr7_4:44688155-44688174 | None:intergenic | 25.0% |
| ! | CTTTCAAATTGAAGTGAAAT+GGG | + | chr7_4:44688154-44688173 | Msa1156410:three_prime_UTR | 25.0% |
| ! | GTTGGTTGTTGAAAATAATA+TGG | + | chr7_4:44688176-44688195 | Msa1156410:three_prime_UTR | 25.0% |
| GCAAAAATGAAGGGATAAAA+GGG | - | chr7_4:44683436-44683455 | None:intergenic | 30.0% | |
| TGCAAAAATGAAGGGATAAA+AGG | - | chr7_4:44683437-44683456 | None:intergenic | 30.0% | |
| AGTCTTGATTACTGTAAGAT+AGG | + | chr7_4:44683465-44683484 | Msa1156410:intron | 30.0% | |
| !! | ATTCTGTTGATTTGTCCAAA+TGG | + | chr7_4:44683521-44683540 | Msa1156410:intron | 30.0% |
| !! | TTCTGTTGATTTGTCCAAAT+GGG | + | chr7_4:44683522-44683541 | Msa1156410:intron | 30.0% |
| TTTCACAATTCCAAATTTCG+AGG | - | chr7_4:44683551-44683570 | None:intergenic | 30.0% | |
| GATCAACAGATTAACGATTT+GGG | - | chr7_4:44683594-44683613 | None:intergenic | 30.0% | |
| AGATCAACAGATTAACGATT+TGG | - | chr7_4:44683595-44683614 | None:intergenic | 30.0% | |
| TAATCTGTTGATCTGTTCAA+AGG | + | chr7_4:44683601-44683620 | Msa1156410:intron | 30.0% | |
| AATCTGTTGATCTGTTCAAA+GGG | + | chr7_4:44683602-44683621 | Msa1156410:intron | 30.0% | |
| ! | AAAGGGTTTTTGCTAAAGTT+TGG | + | chr7_4:44683619-44683638 | Msa1156410:intron | 30.0% |
| TGATTTACCCCAAATTTGAA+AGG | + | chr7_4:44683733-44683752 | Msa1156410:intron | 30.0% | |
| TGAGCTAACCTTTCAAATTT+GGG | - | chr7_4:44683744-44683763 | None:intergenic | 30.0% | |
| ATGAGCTAACCTTTCAAATT+TGG | - | chr7_4:44683745-44683764 | None:intergenic | 30.0% | |
| GAAAAATCAACGTAACGATT+TGG | - | chr7_4:44683831-44683850 | None:intergenic | 30.0% | |
| !!! | GTTACGTTGATTTTTCCAAA+TGG | + | chr7_4:44683835-44683854 | Msa1156410:intron | 30.0% |
| !!! | GCTCTGAAAGTTTTAGATTT+AGG | + | chr7_4:44683861-44683880 | Msa1156410:intron | 30.0% |
| !! | TTTTAGATTTAGGGTCTGTT+TGG | + | chr7_4:44683871-44683890 | Msa1156410:intron | 30.0% |
| GAGTTATTTGAGCTTATCTA+CGG | + | chr7_4:44683929-44683948 | Msa1156410:intron | 30.0% | |
| AGTTATTTGAGCTTATCTAC+GGG | + | chr7_4:44683930-44683949 | Msa1156410:intron | 30.0% | |
| TCCATTAGCATGTATATCTT+AGG | + | chr7_4:44684007-44684026 | Msa1156410:intron | 30.0% | |
| CCATTAGCATGTATATCTTA+GGG | + | chr7_4:44684008-44684027 | Msa1156410:intron | 30.0% | |
| AGTTATATTTGTAGATTCCC+GGG | + | chr7_4:44684044-44684063 | Msa1156410:intron | 30.0% | |
| GGAATAGAAAAAATTTCCCA+AGG | + | chr7_4:44684145-44684164 | Msa1156410:intron | 30.0% | |
| GAAAAAATTTCCCAAGGAAA+TGG | + | chr7_4:44684151-44684170 | Msa1156410:intron | 30.0% | |
| AATAAAGTTCCCATGAAGAT+GGG | + | chr7_4:44684179-44684198 | Msa1156410:intron | 30.0% | |
| GAAATTATTCCCATCTTCAT+GGG | - | chr7_4:44684191-44684210 | None:intergenic | 30.0% | |
| TGAAATTATTCCCATCTTCA+TGG | - | chr7_4:44684192-44684211 | None:intergenic | 30.0% | |
| ! | AAGATGGGAATTTTATTCCA+AGG | - | chr7_4:44684296-44684315 | None:intergenic | 30.0% |
| ATTCCTTGGAACATAAAGAT+GGG | - | chr7_4:44684311-44684330 | None:intergenic | 30.0% | |
| ! | TCAACTGAGATTCATTTTGT+AGG | + | chr7_4:44684612-44684631 | Msa1156410:intron | 30.0% |
| ! | TTTTCATGTCAAATCTGGAA+TGG | - | chr7_4:44684938-44684957 | None:intergenic | 30.0% |
| ATTCCAGATTTGACATGAAA+AGG | + | chr7_4:44684937-44684956 | Msa1156410:intron | 30.0% | |
| ATTTGACATGAAAAGGAGTT+AGG | + | chr7_4:44684944-44684963 | Msa1156410:intron | 30.0% | |
| TTTGACATGAAAAGGAGTTA+GGG | + | chr7_4:44684945-44684964 | Msa1156410:intron | 30.0% | |
| ! | CTCTTTTTCCTTTTTGATCT+TGG | + | chr7_4:44685009-44685028 | Msa1156410:intron | 30.0% |
| AAAACAAGCCAAGATCAAAA+AGG | - | chr7_4:44685020-44685039 | None:intergenic | 30.0% | |
| ! | AAAGTAACACTTCTTTAAGG+AGG | - | chr7_4:44685075-44685094 | None:intergenic | 30.0% |
| GCTAGTAGTATTCTTGTAAA+AGG | + | chr7_4:44685135-44685154 | Msa1156410:intron | 30.0% | |
| !! | TTATGGTAGAGTTTGAGTTT+TGG | + | chr7_4:44685340-44685359 | Msa1156410:intron | 30.0% |
| TTAGATAATTAGGGTATGCT+TGG | + | chr7_4:44685665-44685684 | Msa1156410:intron | 30.0% | |
| TCTACAAACAACAAGAAACA+AGG | - | chr7_4:44685763-44685782 | None:intergenic | 30.0% | |
| !! | TTGTTTCTTGTTGTTTGTAG+AGG | + | chr7_4:44685762-44685781 | Msa1156410:intron | 30.0% |
| GAAACAACGTGAAAATAATG+TGG | - | chr7_4:44685852-44685871 | None:intergenic | 30.0% | |
| TAAGGATTTGTATTGGAAAC+CGG | + | chr7_4:44685880-44685899 | Msa1156410:intron | 30.0% | |
| TATTTGAAAATGGGAGACAA+AGG | + | chr7_4:44685943-44685962 | Msa1156410:intron | 30.0% | |
| ATTTGAAAATGGGAGACAAA+GGG | + | chr7_4:44685944-44685963 | Msa1156410:intron | 30.0% | |
| AATAGCTAAACAAGAGTTGT+GGG | - | chr7_4:44686061-44686080 | None:intergenic | 30.0% | |
| ACTGTGAGCTCTTAAATATT+GGG | - | chr7_4:44686492-44686511 | None:intergenic | 30.0% | |
| AACTGTGAGCTCTTAAATAT+TGG | - | chr7_4:44686493-44686512 | None:intergenic | 30.0% | |
| CAGTTATACATGATAAGAAC+AGG | + | chr7_4:44686508-44686527 | Msa1156410:intron | 30.0% | |
| !! | TAATGGATTTGAGGTCTATA+TGG | + | chr7_4:44686791-44686810 | Msa1156410:intron | 30.0% |
| AAGAAGTGAATTGAATTGGA+AGG | - | chr7_4:44686836-44686855 | None:intergenic | 30.0% | |
| CCTATTAATAATAAGAGAGC+CGG | + | chr7_4:44686931-44686950 | Msa1156410:intron | 30.0% | |
| CTATTAATAATAAGAGAGCC+GGG | + | chr7_4:44686932-44686951 | Msa1156410:intron | 30.0% | |
| AAATATTGTATTTGCAGTGG+AGG | - | chr7_4:44687004-44687023 | None:intergenic | 30.0% | |
| TGCAAATATTGTATTTGCAG+TGG | - | chr7_4:44687007-44687026 | None:intergenic | 30.0% | |
| ACTGCAAATACAATATTTGC+AGG | + | chr7_4:44687006-44687025 | Msa1156410:intron | 30.0% | |
| CTGCAAATACAATATTTGCA+GGG | + | chr7_4:44687007-44687026 | Msa1156410:intron | 30.0% | |
| TGCAAATACAATATTTGCAG+GGG | + | chr7_4:44687008-44687027 | Msa1156410:intron | 30.0% | |
| TCTGTCAAATAGTATGAATG+GGG | - | chr7_4:44687082-44687101 | None:intergenic | 30.0% | |
| CTCTGTCAAATAGTATGAAT+GGG | - | chr7_4:44687083-44687102 | None:intergenic | 30.0% | |
| ACTCTGTCAAATAGTATGAA+TGG | - | chr7_4:44687084-44687103 | None:intergenic | 30.0% | |
| TTCATACTATTTGACAGAGT+TGG | + | chr7_4:44687084-44687103 | Msa1156410:intron | 30.0% | |
| TTTGTATAAGTTATCCTGGA+GGG | + | chr7_4:44687277-44687296 | Msa1156410:intron | 30.0% | |
| GATAACTATTAGGTGATGTT+TGG | - | chr7_4:44687418-44687437 | None:intergenic | 30.0% | |
| AATGTGTGATCAAATATGCA+AGG | - | chr7_4:44687786-44687805 | None:intergenic | 30.0% | |
| GTTAACTTTAACTAGACATG+GGG | - | chr7_4:44688024-44688043 | None:intergenic | 30.0% | |
| GGTTAACTTTAACTAGACAT+GGG | - | chr7_4:44688025-44688044 | None:intergenic | 30.0% | |
| TGGTTAACTTTAACTAGACA+TGG | - | chr7_4:44688026-44688045 | None:intergenic | 30.0% | |
| ACTTCAATTTGAAAGGGTAA+AGG | - | chr7_4:44688149-44688168 | None:intergenic | 30.0% | |
| CCATTTCACTTCAATTTGAA+AGG | - | chr7_4:44688156-44688175 | None:intergenic | 30.0% | |
| CCTTTCAAATTGAAGTGAAA+TGG | + | chr7_4:44688153-44688172 | Msa1156410:three_prime_UTR | 30.0% | |
| TGTTTAGTGAAGAACAACAA+CGG | + | chr7_4:44688217-44688236 | Msa1156410:three_prime_UTR | 30.0% | |
| ! | CTGTTTCTCTTTGTTCTCTT+TGG | - | chr7_4:44683193-44683212 | None:intergenic | 35.0% |
| ! | ATTGGATTGGAATACGAACA+TGG | - | chr7_4:44683267-44683286 | None:intergenic | 35.0% |
| !!! | AATTTTGGAGTGGATTGGAT+TGG | - | chr7_4:44683280-44683299 | None:intergenic | 35.0% |
| TACCTTAATAACTATCTGGG+TGG | + | chr7_4:44683647-44683666 | Msa1156410:intron | 35.0% | |
| GAGCTAACCTTTCAAATTTG+GGG | - | chr7_4:44683743-44683762 | None:intergenic | 35.0% | |
| GTTAGCTCATGAACTATCTT+AGG | + | chr7_4:44683755-44683774 | Msa1156410:intron | 35.0% | |
| !! | ATCTTAGGAGTGTTTGTTTG+TGG | + | chr7_4:44683770-44683789 | Msa1156410:intron | 35.0% |
| !! | GTTTGTGGTCTTAATTTGTG+TGG | + | chr7_4:44683785-44683804 | Msa1156410:intron | 35.0% |
| CCCTAAGATATACATGCTAA+TGG | - | chr7_4:44684011-44684030 | None:intergenic | 35.0% | |
| !!! | GGGAAATTTTTTCTATTCCC+AGG | - | chr7_4:44684144-44684163 | None:intergenic | 35.0% |
| GAATAAAGTTCCCATGAAGA+TGG | + | chr7_4:44684178-44684197 | Msa1156410:intron | 35.0% | |
| !!! | ATCCCTATTTTTATGGTTCC+CGG | + | chr7_4:44684231-44684250 | Msa1156410:intron | 35.0% |
| ATTCCCATCTTTATGTTCCA+AGG | + | chr7_4:44684305-44684324 | Msa1156410:intron | 35.0% | |
| CATTCCTTGGAACATAAAGA+TGG | - | chr7_4:44684312-44684331 | None:intergenic | 35.0% | |
| TTCCAAGGAATGTTATTCCT+AGG | + | chr7_4:44684320-44684339 | Msa1156410:intron | 35.0% | |
| TTCCTAGGAATAACATTCCT+TGG | - | chr7_4:44684325-44684344 | None:intergenic | 35.0% | |
| CTAAATGGGCATTATCATTG+CGG | + | chr7_4:44684692-44684711 | Msa1156410:intron | 35.0% | |
| TGCAGTCTTACCTTAATAAC+TGG | + | chr7_4:44684737-44684756 | Msa1156410:intron | 35.0% | |
| TTACCTTAATAACTGGTGAC+TGG | + | chr7_4:44684744-44684763 | Msa1156410:intron | 35.0% | |
| AAACCAGTCACCAGTTATTA+AGG | - | chr7_4:44684750-44684769 | None:intergenic | 35.0% | |
| ! | ACTCCTTTTCATGTCAAATC+TGG | - | chr7_4:44684943-44684962 | None:intergenic | 35.0% |
| AGCAAAGTGAATCAAAGCAA+GGG | - | chr7_4:44684991-44685010 | None:intergenic | 35.0% | |
| GAGAGTTACTAAGTAGTACA+AGG | - | chr7_4:44685046-44685065 | None:intergenic | 35.0% | |
| AGTGTGTGTATCTAGGAAAT+GGG | - | chr7_4:44685183-44685202 | None:intergenic | 35.0% | |
| TTAAACCAGTGTGTGTATCT+AGG | - | chr7_4:44685190-44685209 | None:intergenic | 35.0% | |
| AACTCTACCATAAAACACCA+TGG | - | chr7_4:44685333-44685352 | None:intergenic | 35.0% | |
| ACTCTTCTGTATTGTGCATA+AGG | + | chr7_4:44685370-44685389 | Msa1156410:intron | 35.0% | |
| !!! | TTCTACTTTTTTCCTTTGGG+TGG | + | chr7_4:44685424-44685443 | Msa1156410:intron | 35.0% |
| !!! | TCTACTTTTTTCCTTTGGGT+GGG | + | chr7_4:44685425-44685444 | Msa1156410:intron | 35.0% |
| AAGGATTTGTATTGGAAACC+GGG | + | chr7_4:44685881-44685900 | Msa1156410:intron | 35.0% | |
| GTGAAAACATGTAATGCGAA+CGG | + | chr7_4:44685997-44686016 | Msa1156410:intron | 35.0% | |
| CAATAGCTAAACAAGAGTTG+TGG | - | chr7_4:44686062-44686081 | None:intergenic | 35.0% | |
| ! | TCTGAAGTTTCTGAATTTGG+AGG | - | chr7_4:44686097-44686116 | None:intergenic | 35.0% |
| !! | AGCTCTGAAGTTTCTGAATT+TGG | - | chr7_4:44686100-44686119 | None:intergenic | 35.0% |
| !! | ATATTTTGGGCCCCAAAATT+GGG | - | chr7_4:44686578-44686597 | None:intergenic | 35.0% |
| !! | AATATTTTGGGCCCCAAAAT+TGG | - | chr7_4:44686579-44686598 | None:intergenic | 35.0% |
| TGTTCACAAACCAAATGTTG+TGG | + | chr7_4:44686651-44686670 | Msa1156410:intron | 35.0% | |
| GCGAAAGAAGTGAATTGAAT+TGG | - | chr7_4:44686840-44686859 | None:intergenic | 35.0% | |
| CCGGCTCTCTTATTATTAAT+AGG | - | chr7_4:44686934-44686953 | None:intergenic | 35.0% | |
| ! | AACTGTGTTGTTCTTATCCA+GGG | - | chr7_4:44686979-44686998 | None:intergenic | 35.0% |
| ATTGTCTATCTTAGACTGTC+TGG | + | chr7_4:44687037-44687056 | Msa1156410:intron | 35.0% | |
| GCTGTTTGTATAAGTTATCC+TGG | + | chr7_4:44687273-44687292 | Msa1156410:intron | 35.0% | |
| GTTTGTATAAGTTATCCTGG+AGG | + | chr7_4:44687276-44687295 | Msa1156410:intron | 35.0% | |
| AAGCAATTGTGAGACTGTTT+GGG | - | chr7_4:44687364-44687383 | None:intergenic | 35.0% | |
| !! | CTTGGTGGTTGATAACTATT+AGG | - | chr7_4:44687428-44687447 | None:intergenic | 35.0% |
| GTGACTGTTCTTCTTAGTTA+AGG | + | chr7_4:44687550-44687569 | Msa1156410:intron | 35.0% | |
| TATCTTGTATACTAGACGCA+TGG | + | chr7_4:44687685-44687704 | Msa1156410:intron | 35.0% | |
| TATGGGTTTAATGGTTTCTC+AGG | + | chr7_4:44687838-44687857 | Msa1156410:intron | 35.0% | |
| ! | AGTGCATTTTCAGAAGGATT+TGG | + | chr7_4:44687871-44687890 | Msa1156410:CDS | 35.0% |
| ! | GTGCATTTTCAGAAGGATTT+GGG | + | chr7_4:44687872-44687891 | Msa1156410:CDS | 35.0% |
| !! | TTTTCAGAAGGATTTGGGTT+TGG | + | chr7_4:44687877-44687896 | Msa1156410:CDS | 35.0% |
| AGACAACGTCGAAATTGTAA+TGG | + | chr7_4:44687907-44687926 | Msa1156410:CDS | 35.0% | |
| AATTGTAATGGCACTAGAAG+AGG | + | chr7_4:44687919-44687938 | Msa1156410:CDS | 35.0% | |
| ! | TTTTATCAGCTTCCTTGTCT+GGG | - | chr7_4:44687961-44687980 | None:intergenic | 35.0% |
| ! | ATTTTATCAGCTTCCTTGTC+TGG | - | chr7_4:44687962-44687981 | None:intergenic | 35.0% |
| CAAATTGGAAGAAGACACAT+TGG | - | chr7_4:44688046-44688065 | None:intergenic | 35.0% | |
| CAATGTGTCTTCTTCCAATT+TGG | + | chr7_4:44688044-44688063 | Msa1156410:three_prime_UTR | 35.0% | |
| AAACATCCAGTGAAAGGTAA+AGG | - | chr7_4:44688097-44688116 | None:intergenic | 35.0% | |
| TTCAAGAAACATCCAGTGAA+AGG | - | chr7_4:44688103-44688122 | None:intergenic | 35.0% | |
| CAAATTGAAGTGAAATGGGT+TGG | + | chr7_4:44688158-44688177 | Msa1156410:three_prime_UTR | 35.0% | |
| GTTTAGTGAAGAACAACAAC+GGG | + | chr7_4:44688218-44688237 | Msa1156410:three_prime_UTR | 35.0% | |
| AACAACAACGGGATATTTGA+AGG | + | chr7_4:44688229-44688248 | Msa1156410:three_prime_UTR | 35.0% | |
| ACAACAACGGGATATTTGAA+GGG | + | chr7_4:44688230-44688249 | Msa1156410:three_prime_UTR | 35.0% | |
| !!! | GTTGCAATTTTGGAGTGGAT+TGG | - | chr7_4:44683285-44683304 | None:intergenic | 40.0% |
| ! | CCATTCCATGGTTGCAATTT+TGG | - | chr7_4:44683295-44683314 | None:intergenic | 40.0% |
| CCAAAATTGCAACCATGGAA+TGG | + | chr7_4:44683292-44683311 | Msa1156410:CDS | 40.0% | |
| ! | GGAAATCTTTGATGACAGAG+AGG | - | chr7_4:44683381-44683400 | None:intergenic | 40.0% |
| CATCAAAGATTTCCCCAAAG+TGG | + | chr7_4:44683387-44683406 | Msa1156410:CDS | 40.0% | |
| ! | ACCTTTGAAGGATCCACTTT+GGG | - | chr7_4:44683403-44683422 | None:intergenic | 40.0% |
| GGAAAAGAAGAGACCTTTGA+AGG | - | chr7_4:44683415-44683434 | None:intergenic | 40.0% | |
| AAATTTCGAGGCAACCCATT+TGG | - | chr7_4:44683539-44683558 | None:intergenic | 40.0% | |
| !! | AAATGGGTTGCCTCGAAATT+TGG | + | chr7_4:44683538-44683557 | Msa1156410:intron | 40.0% |
| CACCACCCAGATAGTTATTA+AGG | - | chr7_4:44683652-44683671 | None:intergenic | 40.0% | |
| AACTTTCAGAGCAACCCATT+TGG | - | chr7_4:44683853-44683872 | None:intergenic | 40.0% | |
| AAATTTCCCAAGGAAATGGG+TGG | + | chr7_4:44684155-44684174 | Msa1156410:intron | 40.0% | |
| AATTTCCCAAGGAAATGGGT+GGG | + | chr7_4:44684156-44684175 | Msa1156410:intron | 40.0% | |
| TTATTCCCACCCATTTCCTT+GGG | - | chr7_4:44684164-44684183 | None:intergenic | 40.0% | |
| TTTATTCCCACCCATTTCCT+TGG | - | chr7_4:44684165-44684184 | None:intergenic | 40.0% | |
| !!! | TCCCTATTTTTATGGTTCCC+GGG | + | chr7_4:44684232-44684251 | Msa1156410:intron | 40.0% |
| TCCCGGGAACCATAAAAATA+GGG | - | chr7_4:44684236-44684255 | None:intergenic | 40.0% | |
| TTCCCGGGAACCATAAAAAT+AGG | - | chr7_4:44684237-44684256 | None:intergenic | 40.0% | |
| AAGTGTCTGTTTGGCTATGT+GGG | + | chr7_4:44684517-44684536 | Msa1156410:intron | 40.0% | |
| GGAAAAACTAGATGGCTCTT+TGG | + | chr7_4:44684633-44684652 | Msa1156410:intron | 40.0% | |
| TATCATTGCGGAGTGTAAGA+AGG | + | chr7_4:44684704-44684723 | Msa1156410:intron | 40.0% | |
| ATCATTGCGGAGTGTAAGAA+GGG | + | chr7_4:44684705-44684724 | Msa1156410:intron | 40.0% | |
| GCAAAGTGAATCAAAGCAAG+GGG | - | chr7_4:44684990-44685009 | None:intergenic | 40.0% | |
| GAGCAAAGTGAATCAAAGCA+AGG | - | chr7_4:44684992-44685011 | None:intergenic | 40.0% | |
| ! | AACACTTCTTTAAGGAGGAG+AGG | - | chr7_4:44685070-44685089 | None:intergenic | 40.0% |
| CAGTGTGTGTATCTAGGAAA+TGG | - | chr7_4:44685184-44685203 | None:intergenic | 40.0% | |
| CATTTCCTAGATACACACAC+TGG | + | chr7_4:44685182-44685201 | Msa1156410:intron | 40.0% | |
| TGGGCAATATTGGACAAAAC+TGG | - | chr7_4:44685247-44685266 | None:intergenic | 40.0% | |
| ! | GTTTTGTCCAATATTGCCCA+TGG | + | chr7_4:44685247-44685266 | Msa1156410:intron | 40.0% |
| AATCTTTCACAAATTGGCCG+TGG | - | chr7_4:44685304-44685323 | None:intergenic | 40.0% | |
| GGCCAATTTGTGAAAGATTG+CGG | + | chr7_4:44685305-44685324 | Msa1156410:intron | 40.0% | |
| CTTCTGTATTGTGCATAAGG+AGG | + | chr7_4:44685373-44685392 | Msa1156410:intron | 40.0% | |
| !!! | CTACTTTTTTCCTTTGGGTG+GGG | + | chr7_4:44685426-44685445 | Msa1156410:intron | 40.0% |
| !!! | TACTTTTTTCCTTTGGGTGG+GGG | + | chr7_4:44685427-44685446 | Msa1156410:intron | 40.0% |
| GCCAAATTACAAATAGGCAG+CGG | + | chr7_4:44686189-44686208 | Msa1156410:intron | 40.0% | |
| GGTCACTAATGCCTTACTTT+AGG | + | chr7_4:44686283-44686302 | Msa1156410:intron | 40.0% | |
| TAGATGGGGATCCTAAAGTA+AGG | - | chr7_4:44686297-44686316 | None:intergenic | 40.0% | |
| ATACATGATAAGAACAGGGC+CGG | + | chr7_4:44686513-44686532 | Msa1156410:intron | 40.0% | |
| !! | TATTTTGGGCCCCAAAATTG+GGG | - | chr7_4:44686577-44686596 | None:intergenic | 40.0% |
| CACTACCATATTTAACCGCT+GGG | - | chr7_4:44686677-44686696 | None:intergenic | 40.0% | |
| ACACTACCATATTTAACCGC+TGG | - | chr7_4:44686678-44686697 | None:intergenic | 40.0% | |
| !!! | GTGTTGTGCTTTTTTGTCTG+CGG | + | chr7_4:44686694-44686713 | Msa1156410:intron | 40.0% |
| ! | GAACTGTGTTGTTCTTATCC+AGG | - | chr7_4:44686980-44686999 | None:intergenic | 40.0% |
| CAAGCAATTGTGAGACTGTT+TGG | - | chr7_4:44687365-44687384 | None:intergenic | 40.0% | |
| !! | TCCAGAAGTGCATTTTCAGA+AGG | + | chr7_4:44687865-44687884 | Msa1156410:CDS | 40.0% |
| ! | TCCTTCTGAAAATGCACTTC+TGG | - | chr7_4:44687869-44687888 | None:intergenic | 40.0% |
| AACTTTAACTAGACATGGGG+TGG | - | chr7_4:44688021-44688040 | None:intergenic | 40.0% | |
| CACTGGATGTTTCTTGAATC+TGG | + | chr7_4:44688105-44688124 | Msa1156410:three_prime_UTR | 40.0% | |
| GGATTGGAATACGAACATGG+CGG | - | chr7_4:44683264-44683283 | None:intergenic | 45.0% | |
| !! | CCATGGTTGCAATTTTGGAG+TGG | - | chr7_4:44683290-44683309 | None:intergenic | 45.0% |
| CCACTCCAAAATTGCAACCA+TGG | + | chr7_4:44683287-44683306 | Msa1156410:CDS | 45.0% | |
| GATCGAATGGAACCATTCCA+TGG | - | chr7_4:44683307-44683326 | None:intergenic | 45.0% | |
| GTGTGAAGACATGGATCGAA+TGG | - | chr7_4:44683320-44683339 | None:intergenic | 45.0% | |
| ATGATCGTCGTGTGAAGACA+TGG | - | chr7_4:44683329-44683348 | None:intergenic | 45.0% | |
| ! | CCTTTGAAGGATCCACTTTG+GGG | - | chr7_4:44683402-44683421 | None:intergenic | 45.0% |
| ! | GACCTTTGAAGGATCCACTT+TGG | - | chr7_4:44683404-44683423 | None:intergenic | 45.0% |
| TCTCTCAAACGGTCTCACAT+TGG | - | chr7_4:44683962-44683981 | None:intergenic | 45.0% | |
| TCCTGGGTATAAAACGTTCC+TGG | + | chr7_4:44684123-44684142 | Msa1156410:intron | 45.0% | |
| CCTGGGTATAAAACGTTCCT+GGG | + | chr7_4:44684124-44684143 | Msa1156410:intron | 45.0% | |
| ! | GAAGTGTCTGTTTGGCTATG+TGG | + | chr7_4:44684516-44684535 | Msa1156410:intron | 45.0% |
| AGTGTCTGTTTGGCTATGTG+GGG | + | chr7_4:44684518-44684537 | Msa1156410:intron | 45.0% | |
| !!! | CTGGTGACTGGTTTTCTACA+CGG | + | chr7_4:44684756-44684775 | Msa1156410:intron | 45.0% |
| CATGAAAAGGAGTTAGGGAC+TGG | + | chr7_4:44684950-44684969 | Msa1156410:intron | 45.0% | |
| CAATCTGCCATGGGCAATAT+TGG | - | chr7_4:44685257-44685276 | None:intergenic | 45.0% | |
| ATATTGCCCATGGCAGATTG+CGG | + | chr7_4:44685257-44685276 | Msa1156410:intron | 45.0% | |
| !!! | GGATTTTTTGACAACCGCCA+CGG | + | chr7_4:44685284-44685303 | Msa1156410:intron | 45.0% |
| CGCCGCAATCTTTCACAAAT+TGG | - | chr7_4:44685310-44685329 | None:intergenic | 45.0% | |
| CTGTATTGTGCATAAGGAGG+AGG | + | chr7_4:44685376-44685395 | Msa1156410:intron | 45.0% | |
| TAGAAACTGGAATAGCTCCC+AGG | + | chr7_4:44686138-44686157 | Msa1156410:intron | 45.0% | |
| GCCGCTGCCTATTTGTAATT+TGG | - | chr7_4:44686193-44686212 | None:intergenic | 45.0% | |
| GCGGTTCAACTCCCATATAA+TGG | + | chr7_4:44686713-44686732 | Msa1156410:intron | 45.0% | |
| TCGAAGACTGAGACCTTGTT+TGG | + | chr7_4:44687149-44687168 | Msa1156410:intron | 45.0% | |
| TTTATTTCCATGAGCCCTCC+AGG | - | chr7_4:44687294-44687313 | None:intergenic | 45.0% | |
| TGGAGGGCTCATGGAAATAA+AGG | + | chr7_4:44687293-44687312 | Msa1156410:intron | 45.0% | |
| ! | ATACTGTGACGATGACTTGG+TGG | - | chr7_4:44687443-44687462 | None:intergenic | 45.0% |
| CTGATACTGTGACGATGACT+TGG | - | chr7_4:44687446-44687465 | None:intergenic | 45.0% | |
| AAGAACAGTCACCGAAGTGA+GGG | - | chr7_4:44687542-44687561 | None:intergenic | 45.0% | |
| ACTAGAAGAGGAGTTCAAGC+TGG | + | chr7_4:44687931-44687950 | Msa1156410:CDS | 45.0% | |
| GTGCAACCTTTACCTTTCAC+TGG | + | chr7_4:44688088-44688107 | Msa1156410:three_prime_UTR | 45.0% | |
| ! | TGCGTAAGAAACAGTGCTGA+TGG | + | chr7_4:44688291-44688310 | Msa1156410:three_prime_UTR | 45.0% |
| TGATGGAGCTTGTCATGATG+AGG | + | chr7_4:44688308-44688327 | Msa1156410:three_prime_UTR | 45.0% | |
| !!! | AAATAAAACATTATTTTTTT+AGG | + | chr7_4:44686906-44686925 | Msa1156410:intron | 5.0% |
| !!! | AATAAAACATTATTTTTTTA+GGG | + | chr7_4:44686907-44686926 | Msa1156410:intron | 5.0% |
| CGAGAGAGAGAGAGAGAGAA+TGG | + | chr7_4:44683219-44683238 | Msa1156410:exon | 50.0% | |
| TCGCTCGACGACTTCTTCTT+TGG | - | chr7_4:44683356-44683375 | None:intergenic | 50.0% | |
| CCCCAAAGTGGATCCTTCAA+AGG | + | chr7_4:44683399-44683418 | Msa1156410:CDS | 50.0% | |
| ! | CCCAGGAACGTTTTATACCC+AGG | - | chr7_4:44684127-44684146 | None:intergenic | 50.0% |
| ACAAGGCCTTACTCACCATC+TGG | + | chr7_4:44684493-44684512 | Msa1156410:intron | 50.0% | |
| CAAGGCCTTACTCACCATCT+GGG | + | chr7_4:44684494-44684513 | Msa1156410:intron | 50.0% | |
| CACTTCCCAGATGGTGAGTA+AGG | - | chr7_4:44684502-44684521 | None:intergenic | 50.0% | |
| CCAAACAGACACTTCCCAGA+TGG | - | chr7_4:44684511-44684530 | None:intergenic | 50.0% | |
| !! | CCATCTGGGAAGTGTCTGTT+TGG | + | chr7_4:44684508-44684527 | Msa1156410:intron | 50.0% |
| TTTGGCTATGTGGGGATTCG+AGG | + | chr7_4:44684526-44684545 | Msa1156410:intron | 50.0% | |
| AAGGAGTTAGGGACTGGAAG+TGG | + | chr7_4:44684956-44684975 | Msa1156410:intron | 50.0% | |
| CTTTCACAAATTGGCCGTGG+CGG | - | chr7_4:44685301-44685320 | None:intergenic | 50.0% | |
| ! | GGAGGCATATACGCGCTTTA+TGG | + | chr7_4:44685394-44685413 | Msa1156410:intron | 50.0% |
| TGCAAACAGCTCTACAGAGC+TGG | + | chr7_4:44686547-44686566 | Msa1156410:intron | 50.0% | |
| GCAAACAGCTCTACAGAGCT+GGG | + | chr7_4:44686548-44686567 | Msa1156410:intron | 50.0% | |
| AACCAAATGTTGTGGCCCAG+CGG | + | chr7_4:44686659-44686678 | Msa1156410:intron | 50.0% | |
| TGTGGCCCAGCGGTTAAATA+TGG | + | chr7_4:44686669-44686688 | Msa1156410:intron | 50.0% | |
| AAGTTATCCTGGAGGGCTCA+TGG | + | chr7_4:44687284-44687303 | Msa1156410:intron | 50.0% | |
| GACGAGAATGTCCCTCACTT+CGG | + | chr7_4:44687528-44687547 | Msa1156410:intron | 50.0% | |
| GAAGAACAGTCACCGAAGTG+AGG | - | chr7_4:44687543-44687562 | None:intergenic | 50.0% | |
| CAAGCTGGAAATCCCAGACA+AGG | + | chr7_4:44687946-44687965 | Msa1156410:CDS | 50.0% | |
| TGTGAAAGATTGCGGCGCCA+TGG | + | chr7_4:44685313-44685332 | Msa1156410:intron | 55.0% | |
| ! | TGCGGCGCCATGGTGTTTTA+TGG | + | chr7_4:44685323-44685342 | Msa1156410:intron | 55.0% |
| TTTCCTTTGGGTGGGGGTGA+AGG | + | chr7_4:44685433-44685452 | Msa1156410:intron | 55.0% | |
| ! | AGCTGGGCCTCCCCAATTTT+GGG | + | chr7_4:44686564-44686583 | Msa1156410:intron | 55.0% |
| TTTGGGCCCCAAAATTGGGG+AGG | - | chr7_4:44686574-44686593 | None:intergenic | 55.0% | |
| AACCGCTGGGCCACAACATT+TGG | - | chr7_4:44686664-44686683 | None:intergenic | 55.0% | |
| TCCCTGTGAAATTGGAGGCC+CGG | - | chr7_4:44686953-44686972 | None:intergenic | 55.0% | |
| GGCCTCCAATTTCACAGGGA+CGG | + | chr7_4:44686953-44686972 | Msa1156410:intron | 55.0% | |
| TTGCCCATGGCAGATTGCGG+TGG | + | chr7_4:44685260-44685279 | Msa1156410:intron | 60.0% | |
| ATAAGAACAGGGCCGGCCCT+GGG | + | chr7_4:44686520-44686539 | Msa1156410:intron | 60.0% | |
| GAGCTGTTTGCACCTCCCCA+GGG | - | chr7_4:44686539-44686558 | None:intergenic | 60.0% | |
| AGAGCTGTTTGCACCTCCCC+AGG | - | chr7_4:44686540-44686559 | None:intergenic | 60.0% | |
| ! | GAGCTGGGCCTCCCCAATTT+TGG | + | chr7_4:44686563-44686582 | Msa1156410:intron | 60.0% |
| ! | GCTGGGCCTCCCCAATTTTG+GGG | + | chr7_4:44686565-44686584 | Msa1156410:intron | 60.0% |
| AGCCGGGCCTCCAATTTCAC+AGG | + | chr7_4:44686948-44686967 | Msa1156410:intron | 60.0% | |
| GCCGGGCCTCCAATTTCACA+GGG | + | chr7_4:44686949-44686968 | Msa1156410:intron | 60.0% | |
| GGCCGTCCCTGTGAAATTGG+AGG | - | chr7_4:44686958-44686977 | None:intergenic | 60.0% | |
| CAGGGCCGTCCCTGTGAAAT+TGG | - | chr7_4:44686961-44686980 | None:intergenic | 60.0% | |
| CAATTTCACAGGGACGGCCC+TGG | + | chr7_4:44686959-44686978 | Msa1156410:intron | 60.0% | |
| CCGCCACCGCAATCTGCCAT+GGG | - | chr7_4:44685266-44685285 | None:intergenic | 65.0% | |
| CCCATGGCAGATTGCGGTGG+CGG | + | chr7_4:44685263-44685282 | Msa1156410:intron | 65.0% | |
| TCCGCCACCGCAATCTGCCA+TGG | - | chr7_4:44685267-44685286 | None:intergenic | 65.0% | |
| CCTCCTTCACCCCCACCCAA+AGG | - | chr7_4:44685439-44685458 | None:intergenic | 65.0% | |
| CCTTTGGGTGGGGGTGAAGG+AGG | + | chr7_4:44685436-44685455 | Msa1156410:intron | 65.0% | |
| TTGGGTGGGGGTGAAGGAGG+CGG | + | chr7_4:44685439-44685458 | Msa1156410:intron | 65.0% | |
| GATAAGAACAGGGCCGGCCC+TGG | + | chr7_4:44686519-44686538 | Msa1156410:intron | 65.0% | |
| TAAGAACAGGGCCGGCCCTG+GGG | + | chr7_4:44686521-44686540 | Msa1156410:intron | 65.0% | |
| TGTTTGCACCTCCCCAGGGC+CGG | - | chr7_4:44686535-44686554 | None:intergenic | 65.0% | |
| TGGGTGGGGGTGAAGGAGGC+GGG | + | chr7_4:44685440-44685459 | Msa1156410:intron | 70.0% | |
| GGGTGGGGGTGAAGGAGGCG+GGG | + | chr7_4:44685441-44685460 | Msa1156410:intron | 75.0% | |
| GGTGGGGGTGAAGGAGGCGG+GGG | + | chr7_4:44685442-44685461 | Msa1156410:intron | 75.0% | |
| GTGGGGGTGAAGGAGGCGGG+GGG | + | chr7_4:44685443-44685462 | Msa1156410:intron | 75.0% | |
| TGGGGGTGAAGGAGGCGGGG+GGG | + | chr7_4:44685444-44685463 | Msa1156410:intron | 75.0% | |
| ! | GGGGGTGAAGGAGGCGGGGG+GGG | + | chr7_4:44685445-44685464 | Msa1156410:intron | 80.0% |
| ! | GGGGTGAAGGAGGCGGGGGG+GGG | + | chr7_4:44685446-44685465 | Msa1156410:intron | 80.0% |
| ! | GGGTGAAGGAGGCGGGGGGG+GGG | + | chr7_4:44685447-44685466 | Msa1156410:intron | 80.0% |
| ! | GGTGAAGGAGGCGGGGGGGG+GGG | + | chr7_4:44685448-44685467 | Msa1156410:intron | 80.0% |
| ! | GTGAAGGAGGCGGGGGGGGG+GGG | + | chr7_4:44685449-44685468 | Msa1156410:intron | 80.0% |
| ! | TGAAGGAGGCGGGGGGGGGG+GGG | + | chr7_4:44685450-44685469 | Msa1156410:intron | 80.0% |
| ! | GAACAGGGCCGGCCCTGGGG+AGG | + | chr7_4:44686524-44686543 | Msa1156410:intron | 80.0% |
| ! | GAAGGAGGCGGGGGGGGGGG+GGG | + | chr7_4:44685451-44685470 | Msa1156410:intron | 85.0% |
| ! | AAGGAGGCGGGGGGGGGGGG+GGG | + | chr7_4:44685452-44685471 | Msa1156410:intron | 85.0% |
| ! | AGGAGGCGGGGGGGGGGGGG+GGG | + | chr7_4:44685453-44685472 | Msa1156410:intron | 90.0% |
| ! | GGAGGCGGGGGGGGGGGGGG+GGG | + | chr7_4:44685454-44685473 | Msa1156410:intron | 95.0% |
| ! | GAGGCGGGGGGGGGGGGGGG+GGG | + | chr7_4:44685455-44685474 | Msa1156410:intron | 95.0% |
| ! | AGGCGGGGGGGGGGGGGGGG+GGG | + | chr7_4:44685456-44685475 | Msa1156410:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 44683175 | 44688371 | 44683175 | ID=Msa1156410;Name=Msa1156410 |
| chr7_4 | mRNA | 44683175 | 44688371 | 44683175 | ID=Msa1156410-mRNA-1;Parent=Msa1156410;Name=Msa1156410-mRNA-1;_AED=0.02;_eAED=0.02;_QI=63|1|1|1|1|1|2|335|119 |
| chr7_4 | exon | 44683175 | 44683420 | 44683175 | ID=Msa1156410-mRNA-1:exon:11464;Parent=Msa1156410-mRNA-1 |
| chr7_4 | exon | 44687860 | 44688371 | 44687860 | ID=Msa1156410-mRNA-1:exon:11465;Parent=Msa1156410-mRNA-1 |
| chr7_4 | five_prime_UTR | 44683175 | 44683237 | 44683175 | ID=Msa1156410-mRNA-1:five_prime_utr;Parent=Msa1156410-mRNA-1 |
| chr7_4 | CDS | 44683238 | 44683420 | 44683238 | ID=Msa1156410-mRNA-1:cds;Parent=Msa1156410-mRNA-1 |
| chr7_4 | CDS | 44687860 | 44688036 | 44687860 | ID=Msa1156410-mRNA-1:cds;Parent=Msa1156410-mRNA-1 |
| chr7_4 | three_prime_UTR | 44688037 | 44688371 | 44688037 | ID=Msa1156410-mRNA-1:three_prime_utr;Parent=Msa1156410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
