Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156460 | XP_003624241.1 | 96.491 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 2.79e-158 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156460 | A2Q5X5 | 96.491 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 1.33e-158 | 447 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1029490 | Msa1156460 | 0.802004 | 6.890043e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156460 | MtrunA17_Chr7g0249871 | 96.491 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 2.57e-162 | 447 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156460 | AT1G75670.2 | 54.124 | 194 | 87 | 1 | 1 | 192 | 1 | 194 | 5.85e-75 | 225 |
| Msa1156460 | AT1G75670.1 | 54.124 | 194 | 87 | 1 | 1 | 192 | 1 | 194 | 5.85e-75 | 225 |
| Msa1156460 | AT1G75670.3 | 53.548 | 155 | 70 | 1 | 1 | 153 | 1 | 155 | 3.17e-56 | 176 |
Find 87 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTATCCTTTCTGATTA+AGG | 0.143791 | 7_4:+44733012 | None:intergenic |
| GCATCTTTATCTGACATTAA+TGG | 0.198898 | 7_4:+44734686 | None:intergenic |
| GATGGGGTTTATCTCAGTTT+TGG | 0.206768 | 7_4:-44733101 | Msa1156460:three_prime_UTR |
| TCATCCAATGGAAGGGTTAA+AGG | 0.215251 | 7_4:-44736629 | Msa1156460:exon |
| ACTGAGTGAGTTTGATAATT+AGG | 0.224281 | 7_4:-44732981 | Msa1156460:three_prime_UTR |
| CAATCTGTGATTGTAATTTC+AGG | 0.251518 | 7_4:-44733044 | Msa1156460:three_prime_UTR |
| TCCACAGATCAATGTTAAAA+AGG | 0.281747 | 7_4:+44732898 | None:intergenic |
| CCCAAGCCAGATATGCTTAT+AGG | 0.283996 | 7_4:-44736293 | Msa1156460:intron |
| TGAAATTAACTCGGTGTAAT+GGG | 0.288998 | 7_4:+44736667 | None:intergenic |
| TTATAACTGAGAAAGATATT+AGG | 0.297974 | 7_4:-44736112 | Msa1156460:CDS |
| GGACTCGCCATTTGATGTTT+AGG | 0.304647 | 7_4:-44733182 | Msa1156460:three_prime_UTR |
| AGAGGTCGGGTTAGTTTGTT+AGG | 0.305121 | 7_4:+44736740 | None:intergenic |
| TCGGTGTAATGGGGTTTATT+TGG | 0.306795 | 7_4:+44736677 | None:intergenic |
| TGTATGTTTCCTGTGTTATC+TGG | 0.310557 | 7_4:+44734870 | None:intergenic |
| TTGCTATCCTTTCTGATTAA+GGG | 0.318383 | 7_4:+44733013 | None:intergenic |
| TATAACTGAGAAAGATATTA+GGG | 0.318851 | 7_4:-44736111 | Msa1156460:CDS |
| ATGCAGAGAAGCTAGGTTTA+TGG | 0.320120 | 7_4:-44733217 | Msa1156460:intron |
| TTAGGTTTGTTATTTGCCTT+TGG | 0.328057 | 7_4:-44732963 | Msa1156460:three_prime_UTR |
| CCCGGTGTTTATCCGTATTT+CGG | 0.337821 | 7_4:-44736350 | Msa1156460:CDS |
| AAGAGAAATACCTGTCAGTA+TGG | 0.339206 | 7_4:+44734817 | None:intergenic |
| ACATTACCTATAAGCATATC+TGG | 0.349568 | 7_4:+44736287 | None:intergenic |
| ACCCTTCCATTGGATGAGTT+AGG | 0.361037 | 7_4:+44736635 | None:intergenic |
| AATTGGCATGTTATCATTGA+TGG | 0.364692 | 7_4:-44733119 | Msa1156460:three_prime_UTR |
| GGTTTATGGATGGAAGAGTT+TGG | 0.366673 | 7_4:-44733203 | Msa1156460:three_prime_UTR |
| GTTATTATTGTTATTGTGCT+TGG | 0.377731 | 7_4:-44736149 | Msa1156460:CDS |
| GGTTTATTTGGTTGGTGACT+CGG | 0.380481 | 7_4:+44736689 | None:intergenic |
| GTCGGGTTAGTTTGTTAGGT+TGG | 0.380504 | 7_4:+44736744 | None:intergenic |
| GAGGAACAACTATATGTTTA+CGG | 0.388808 | 7_4:-44734903 | Msa1156460:CDS |
| TCGGGTTAGTTTGTTAGGTT+GGG | 0.391581 | 7_4:+44736745 | None:intergenic |
| GGATTATTACTACACAAAAC+TGG | 0.404638 | 7_4:-44732878 | Msa1156460:three_prime_UTR |
| CCCTTCCATTGGATGAGTTA+GGG | 0.406234 | 7_4:+44736636 | None:intergenic |
| GGCTTACGACGTTGATTCGT+TGG | 0.406796 | 7_4:-44736393 | Msa1156460:CDS |
| TTGAAATTAACTCGGTGTAA+TGG | 0.407608 | 7_4:+44736666 | None:intergenic |
| GAGTTCACGAAGAACGGCTT+TGG | 0.409430 | 7_4:+44736552 | None:intergenic |
| AAGATCTCAATACAGCATTC+AGG | 0.410641 | 7_4:+44734592 | None:intergenic |
| ACCTATAAGCATATCTGGCT+TGG | 0.413600 | 7_4:+44736292 | None:intergenic |
| CTTTACCAGTGAATAAAAGT+TGG | 0.422065 | 7_4:+44734559 | None:intergenic |
| ATCAGAAAGGATAGCAAGAT+TGG | 0.436612 | 7_4:-44733007 | Msa1156460:three_prime_UTR |
| AAAATCCACCAACTTCGTAT+AGG | 0.439809 | 7_4:+44732774 | None:intergenic |
| ATGCAACAGGGAAAACGAAT+TGG | 0.445844 | 7_4:-44733136 | Msa1156460:three_prime_UTR |
| TGTAATGGGGTTTATTTGGT+TGG | 0.455726 | 7_4:+44736681 | None:intergenic |
| ATGAATGTAAACTACTAAGT+TGG | 0.456155 | 7_4:+44736597 | None:intergenic |
| TAATATACCTAAACATCAAA+TGG | 0.456489 | 7_4:+44733175 | None:intergenic |
| AATCTGTGATTGTAATTTCA+GGG | 0.456886 | 7_4:-44733043 | Msa1156460:three_prime_UTR |
| ACTATATGTTTACGGATCTC+TGG | 0.459477 | 7_4:-44734895 | Msa1156460:CDS |
| CCTATAAGCATATCTGGCTT+GGG | 0.459710 | 7_4:+44736293 | None:intergenic |
| GAAACCTTTAACCCTTCCAT+TGG | 0.479905 | 7_4:+44736625 | None:intergenic |
| AGAAAATGAGAGAAGAGGTC+GGG | 0.484522 | 7_4:+44736727 | None:intergenic |
| CACAGGAAACATACAATGGT+TGG | 0.492470 | 7_4:-44734862 | Msa1156460:CDS |
| TTCAGATTAACACCGAAATA+CGG | 0.507297 | 7_4:+44736338 | None:intergenic |
| ATTGGCATGTTATCATTGAT+GGG | 0.512631 | 7_4:-44733118 | Msa1156460:three_prime_UTR |
| AAATGCGCCAAGGTTCTTCC+CGG | 0.515392 | 7_4:-44736368 | Msa1156460:CDS |
| AAGAAAATGAGAGAAGAGGT+CGG | 0.520804 | 7_4:+44736726 | None:intergenic |
| GTATTTCGGTGTTAATCTGA+AGG | 0.522915 | 7_4:-44736336 | Msa1156460:CDS |
| ATTGGCAATGCAGAGAAGCT+AGG | 0.538208 | 7_4:-44733224 | Msa1156460:intron |
| AAGCGACATGTGATAAAGAA+AGG | 0.538550 | 7_4:-44735929 | Msa1156460:CDS |
| CAAAACCCTAACTCATCCAA+TGG | 0.544137 | 7_4:-44736641 | Msa1156460:exon |
| GAAACTTGATTGCTTTGAGA+AGG | 0.548730 | 7_4:+44736574 | None:intergenic |
| GTTGAAGAAAATGAGAGAAG+AGG | 0.552782 | 7_4:+44736722 | None:intergenic |
| AAGTTGTTTCCCATACTGAC+AGG | 0.555811 | 7_4:-44734827 | Msa1156460:intron |
| ACCCTAACTCATCCAATGGA+AGG | 0.556187 | 7_4:-44736637 | Msa1156460:exon |
| AGTGCTGAGTTCACGAAGAA+CGG | 0.556777 | 7_4:+44736546 | None:intergenic |
| TGCTAGACCCTTAATCAGAA+AGG | 0.556885 | 7_4:-44733020 | Msa1156460:three_prime_UTR |
| ACAATAACAATAATAACCTC+AGG | 0.561602 | 7_4:+44736155 | None:intergenic |
| ATAAACACCGGGAAGAACCT+TGG | 0.567628 | 7_4:+44736361 | None:intergenic |
| AGAGAAATACCTGTCAGTAT+GGG | 0.570807 | 7_4:+44734818 | None:intergenic |
| CCCTAACTCATCCAATGGAA+GGG | 0.580902 | 7_4:-44736636 | Msa1156460:exon |
| TTGGTCTGATCAATGACAGA+TGG | 0.583880 | 7_4:-44732944 | Msa1156460:three_prime_UTR |
| CCGAAATACGGATAAACACC+GGG | 0.584646 | 7_4:+44736350 | None:intergenic |
| AAATAAAATGACACTTAATG+AGG | 0.586864 | 7_4:+44732808 | None:intergenic |
| TTCGTTGGACAAATGCGCCA+AGG | 0.588326 | 7_4:-44736378 | Msa1156460:CDS |
| GGGAGAGTTCAAATTCACAT+TGG | 0.603036 | 7_4:-44736090 | Msa1156460:intron |
| GAAATTAACTCGGTGTAATG+GGG | 0.603502 | 7_4:+44736668 | None:intergenic |
| ACCGAAATACGGATAAACAC+CGG | 0.606771 | 7_4:+44736349 | None:intergenic |
| TTGGCATGTTATCATTGATG+GGG | 0.610900 | 7_4:-44733117 | Msa1156460:three_prime_UTR |
| TTATTTGGTTGGTGACTCGG+TGG | 0.629988 | 7_4:+44736692 | None:intergenic |
| TTGGTGACTCGGTGGAGAAG+AGG | 0.634706 | 7_4:+44736700 | None:intergenic |
| TCTGTCATTGATCAGACCAA+AGG | 0.640202 | 7_4:+44732947 | None:intergenic |
| ACAATGGTTGGATAAGAACT+CGG | 0.646452 | 7_4:-44734850 | Msa1156460:CDS |
| AGAGAAGCTAGGTTTATGGA+TGG | 0.649101 | 7_4:-44733213 | Msa1156460:three_prime_UTR |
| TAATCGTTGCAGCTTCGATG+AGG | 0.651947 | 7_4:-44734922 | Msa1156460:intron |
| CTTAACCGAAAACCGCAGCA+TGG | 0.667040 | 7_4:+44735904 | None:intergenic |
| AGTAGAGAAAGTTACACCTG+AGG | 0.691992 | 7_4:-44736171 | Msa1156460:CDS |
| ATAACACAGGAAACATACAA+TGG | 0.704605 | 7_4:-44734866 | Msa1156460:CDS |
| ATAACTGAGAAAGATATTAG+GGG | 0.708025 | 7_4:-44736110 | Msa1156460:CDS |
| TAAAGAAAGGAACCATGCTG+CGG | 0.718558 | 7_4:-44735916 | Msa1156460:CDS |
| TCTCTGGTTCCAGATAACAC+AGG | 0.761135 | 7_4:-44734879 | Msa1156460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGATTCTATTTTAATTAAA+AGG | - | chr7_4:44734994-44735013 | Msa1156460:intron | 10.0% |
| !!! | AATTTTTTTATCATAAACTT+TGG | - | chr7_4:44735078-44735097 | Msa1156460:intron | 10.0% |
| !!! | TAAAGTGTTATATTATTAGT+TGG | + | chr7_4:44733888-44733907 | None:intergenic | 15.0% |
| !! | TTGAAAATGAATATATTCAT+AGG | - | chr7_4:44733923-44733942 | Msa1156460:intron | 15.0% |
| !!! | GTAATACTTTTAATTCATAT+AGG | - | chr7_4:44734382-44734401 | Msa1156460:intron | 15.0% |
| !! | TGTATGTTAGAAATTTAAAA+AGG | - | chr7_4:44735107-44735126 | Msa1156460:intron | 15.0% |
| !! | TGTATGTTAGAAATTTAAAA+AGG | - | chr7_4:44735107-44735126 | Msa1156460:intron | 15.0% |
| !! | TATATCAAACATAAATCTAA+GGG | + | chr7_4:44735471-44735490 | None:intergenic | 15.0% |
| !! | TAATCTAATTAATGACATAT+TGG | - | chr7_4:44736291-44736310 | Msa1156460:intron | 15.0% |
| !! | TAAAAATTCTGTTACATTGA+AGG | + | chr7_4:44733039-44733058 | None:intergenic | 20.0% |
| !!! | AGGTAATGTTGATAATTTTT+TGG | - | chr7_4:44733260-44733279 | Msa1156460:intron | 20.0% |
| !!! | TGGTTTTAAGAAAAAATCAA+AGG | - | chr7_4:44733280-44733299 | Msa1156460:intron | 20.0% |
| !!! | AGTTAGGTTAGTTAATTAAT+TGG | - | chr7_4:44733308-44733327 | Msa1156460:intron | 20.0% |
| !!! | GTTAGGTTAGTTAATTAATT+GGG | - | chr7_4:44733309-44733328 | Msa1156460:intron | 20.0% |
| !! | TTATAACTGAGAAAGATATT+AGG | - | chr7_4:44733421-44733440 | Msa1156460:intron | 20.0% |
| !! | TATAACTGAGAAAGATATTA+GGG | - | chr7_4:44733422-44733441 | Msa1156460:intron | 20.0% |
| !!! | TTTTTCTTTTTGTAGAAACA+TGG | - | chr7_4:44733559-44733578 | Msa1156460:intron | 20.0% |
| !!! | TTTTCTTTTTGTAGAAACAT+GGG | - | chr7_4:44733560-44733579 | Msa1156460:intron | 20.0% |
| !! | ATTAGTTGGTTACATATTTA+TGG | + | chr7_4:44733874-44733893 | None:intergenic | 20.0% |
| !! | ATGAATATATTCATAGGAAT+TGG | - | chr7_4:44733929-44733948 | Msa1156460:intron | 20.0% |
| !! | TTCCATATCAATAAATTTGT+GGG | - | chr7_4:44733953-44733972 | Msa1156460:intron | 20.0% |
| !! | ATATCTAGTATCTACTATTA+AGG | - | chr7_4:44734030-44734049 | Msa1156460:intron | 20.0% |
| !!! | TTGTTCATTTTTGTACATTT+TGG | + | chr7_4:44734121-44734140 | None:intergenic | 20.0% |
| !!! | GTTATAACTTTTGTACATTT+TGG | + | chr7_4:44734217-44734236 | None:intergenic | 20.0% |
| !!! | ACTTTTAATTCATATAGGAT+AGG | - | chr7_4:44734387-44734406 | Msa1156460:intron | 20.0% |
| !!! | CTTCGACATTTTTAATTTTT+TGG | + | chr7_4:44734899-44734918 | None:intergenic | 20.0% |
| !! | AGAAATTTAAAAAGGCTAAA+AGG | - | chr7_4:44735206-44735225 | Msa1156460:intron | 20.0% |
| !! | ATATCAAACATAAATCTAAG+GGG | + | chr7_4:44735470-44735489 | None:intergenic | 20.0% |
| !! | CTATATCAAACATAAATCTA+AGG | + | chr7_4:44735472-44735491 | None:intergenic | 20.0% |
| !! | TAATAACACTACATTAAAAG+AGG | + | chr7_4:44735895-44735914 | None:intergenic | 20.0% |
| !!! | TCTATTTCTTTGTTCTATAA+AGG | - | chr7_4:44735935-44735954 | Msa1156460:CDS | 20.0% |
| !! | TAATATACCTAAACATCAAA+TGG | + | chr7_4:44736361-44736380 | None:intergenic | 20.0% |
| !!! | AAGTATTCAATTTTAGAAGT+TGG | + | chr7_4:44736705-44736724 | None:intergenic | 20.0% |
| !! | AAATAAAATGACACTTAATG+AGG | + | chr7_4:44736728-44736747 | None:intergenic | 20.0% |
| !!! | GTTTTGAGTTGAAATTAACT+CGG | + | chr7_4:44732878-44732897 | None:intergenic | 25.0% |
| ! | ATGAATGTAAACTACTAAGT+TGG | + | chr7_4:44732939-44732958 | None:intergenic | 25.0% |
| ! | AAAATCAAAGGAATTGAGTT+AGG | - | chr7_4:44733292-44733311 | Msa1156460:intron | 25.0% |
| ! | ACAATAACAATAATAACCTC+AGG | + | chr7_4:44733381-44733400 | None:intergenic | 25.0% |
| !! | GTTATTATTGTTATTGTGCT+TGG | - | chr7_4:44733384-44733403 | Msa1156460:intron | 25.0% |
| ! | ATAACTGAGAAAGATATTAG+GGG | - | chr7_4:44733423-44733442 | Msa1156460:intron | 25.0% |
| !! | TTTCTTTTTGTAGAAACATG+GGG | - | chr7_4:44733561-44733580 | Msa1156460:intron | 25.0% |
| !! | ATTTTCAACCAATGATATAG+TGG | + | chr7_4:44733911-44733930 | None:intergenic | 25.0% |
| ! | CTTCCATATCAATAAATTTG+TGG | - | chr7_4:44733952-44733971 | Msa1156460:intron | 25.0% |
| ! | TCCATATCAATAAATTTGTG+GGG | - | chr7_4:44733954-44733973 | Msa1156460:intron | 25.0% |
| !! | TCCTGTAGATCAATTTTTAA+GGG | + | chr7_4:44734291-44734310 | None:intergenic | 25.0% |
| !! | TTCCTGTAGATCAATTTTTA+AGG | + | chr7_4:44734292-44734311 | None:intergenic | 25.0% |
| !! | ACCCTGTAAAGTTTAAAATT+TGG | - | chr7_4:44734546-44734565 | Msa1156460:intron | 25.0% |
| !! | CCCAAATTTTAAACTTTACA+GGG | + | chr7_4:44734550-44734569 | None:intergenic | 25.0% |
| !! | CCCTGTAAAGTTTAAAATTT+GGG | - | chr7_4:44734547-44734566 | Msa1156460:intron | 25.0% |
| ! | ACAAAAAAGAGAGAAAATGA+GGG | - | chr7_4:44734820-44734839 | Msa1156460:intron | 25.0% |
| ! | AGAGAAAAAAGGTAAATACA+AGG | - | chr7_4:44735383-44735402 | Msa1156460:intron | 25.0% |
| ! | GAGAAAAAAGGTAAATACAA+GGG | - | chr7_4:44735384-44735403 | Msa1156460:intron | 25.0% |
| ! | AAAAAACTGAAGAATGGTTA+TGG | - | chr7_4:44735412-44735431 | Msa1156460:intron | 25.0% |
| !! | CTATTTTCTTACTTCTGTTT+TGG | + | chr7_4:44735514-44735533 | None:intergenic | 25.0% |
| ! | AACTCTTTGATAGATACATT+AGG | + | chr7_4:44735604-44735623 | None:intergenic | 25.0% |
| ! | TATTCACTCAAATTTGGAAA+GGG | + | chr7_4:44735734-44735753 | None:intergenic | 25.0% |
| !! | CTTTTCTATTCACTCAAATT+TGG | + | chr7_4:44735740-44735759 | None:intergenic | 25.0% |
| ! | ATTCACAAACTTTCTTAAAC+TGG | - | chr7_4:44735768-44735787 | Msa1156460:intron | 25.0% |
| !! | AATGTAGTGTTATTATAGAC+AGG | - | chr7_4:44735900-44735919 | Msa1156460:intron | 25.0% |
| !! | TTCTATAAAGGCATAAGAAA+GGG | - | chr7_4:44735947-44735966 | Msa1156460:CDS | 25.0% |
| !! | TTAACCTCATTCATTCTTTT+TGG | - | chr7_4:44736251-44736270 | Msa1156460:intron | 25.0% |
| ! | AATCTGTGATTGTAATTTCA+GGG | - | chr7_4:44736490-44736509 | Msa1156460:intron | 25.0% |
| !! | TGAAATTAACTCGGTGTAAT+GGG | + | chr7_4:44732869-44732888 | None:intergenic | 30.0% |
| !! | TTGAAATTAACTCGGTGTAA+TGG | + | chr7_4:44732870-44732889 | None:intergenic | 30.0% |
| AAATTCTGTTACATTGAAGG+TGG | + | chr7_4:44733036-44733055 | None:intergenic | 30.0% | |
| TTCAGATTAACACCGAAATA+CGG | + | chr7_4:44733198-44733217 | None:intergenic | 30.0% | |
| ACATTACCTATAAGCATATC+TGG | + | chr7_4:44733249-44733268 | None:intergenic | 30.0% | |
| !!! | TGTTGTGTTGTTTTTTCAGA+AGG | - | chr7_4:44733336-44733355 | Msa1156460:intron | 30.0% |
| ACAACAACTACGAAAACATT+CGG | + | chr7_4:44733481-44733500 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGTCTTATTGTGT+CGG | - | chr7_4:44733494-44733513 | Msa1156460:intron | 30.0% |
| !!! | GATATTTTAGTTAGTTCAGC+TGG | - | chr7_4:44733777-44733796 | Msa1156460:intron | 30.0% |
| ACACTTTACCACTATATCAT+TGG | - | chr7_4:44733900-44733919 | Msa1156460:intron | 30.0% | |
| TCCCCACAAATTTATTGATA+TGG | + | chr7_4:44733958-44733977 | None:intergenic | 30.0% | |
| !! | TTGTACATTTTGGTGCATTT+GGG | + | chr7_4:44734111-44734130 | None:intergenic | 30.0% |
| !! | TTTGTACATTTTGGTGCATT+TGG | + | chr7_4:44734112-44734131 | None:intergenic | 30.0% |
| !! | ATAACACACTGACTGAATTT+TGG | - | chr7_4:44734146-44734165 | Msa1156460:intron | 30.0% |
| !! | TGTACATTTTGGTACATTTG+AGG | + | chr7_4:44734206-44734225 | None:intergenic | 30.0% |
| !! | ATAACTCACTGACTGAATTT+TGG | - | chr7_4:44734232-44734251 | Msa1156460:intron | 30.0% |
| ACCCTTAAAAATTGATCTAC+AGG | - | chr7_4:44734287-44734306 | Msa1156460:intron | 30.0% | |
| TATACTACCAACAAGAAAGT+CGG | + | chr7_4:44734505-44734524 | None:intergenic | 30.0% | |
| ! | GCCCAAATTTTAAACTTTAC+AGG | + | chr7_4:44734551-44734570 | None:intergenic | 30.0% |
| GAGGAACAACTATATGTTTA+CGG | - | chr7_4:44734630-44734649 | Msa1156460:CDS | 30.0% | |
| ATAACACAGGAAACATACAA+TGG | - | chr7_4:44734667-44734686 | Msa1156460:CDS | 30.0% | |
| TGCATCTTAGAAAACTTTAC+AGG | - | chr7_4:44734794-44734813 | Msa1156460:intron | 30.0% | |
| CACAAAAAAGAGAGAAAATG+AGG | - | chr7_4:44734819-44734838 | Msa1156460:intron | 30.0% | |
| GCATCTTTATCTGACATTAA+TGG | + | chr7_4:44734850-44734869 | None:intergenic | 30.0% | |
| ! | GTAATCCAACTTTTATTCAC+TGG | - | chr7_4:44734969-44734988 | Msa1156460:intron | 30.0% |
| CTTTACCAGTGAATAAAAGT+TGG | + | chr7_4:44734977-44734996 | None:intergenic | 30.0% | |
| ATTCTCTGCATAGAGAAAAA+AGG | - | chr7_4:44735372-44735391 | Msa1156460:intron | 30.0% | |
| GTATCAAACATAAAGAGACT+GGG | + | chr7_4:44735441-44735460 | None:intergenic | 30.0% | |
| TGTATCAAACATAAAGAGAC+TGG | + | chr7_4:44735442-44735461 | None:intergenic | 30.0% | |
| ATAGATACATTAGGAGATGA+GGG | + | chr7_4:44735595-44735614 | None:intergenic | 30.0% | |
| TATATGTTAGGGGTAAACAT+GGG | + | chr7_4:44735711-44735730 | None:intergenic | 30.0% | |
| ! | TTTGGAAAGGGTATATGTTA+GGG | + | chr7_4:44735722-44735741 | None:intergenic | 30.0% |
| ! | ATTTGGAAAGGGTATATGTT+AGG | + | chr7_4:44735723-44735742 | None:intergenic | 30.0% |
| CTATTCACTCAAATTTGGAA+AGG | + | chr7_4:44735735-44735754 | None:intergenic | 30.0% | |
| TGAGTGAATAGAAAAGTGAA+AGG | - | chr7_4:44735744-44735763 | Msa1156460:intron | 30.0% | |
| TCTCAATTAAGTGTTTCCAA+AGG | - | chr7_4:44735815-44735834 | Msa1156460:intron | 30.0% | |
| CTCAATTAAGTGTTTCCAAA+GGG | - | chr7_4:44735816-44735835 | Msa1156460:intron | 30.0% | |
| TCAATTAAGTGTTTCCAAAG+GGG | - | chr7_4:44735817-44735836 | Msa1156460:intron | 30.0% | |
| !! | AAGAGGATAACCTTACTTTT+GGG | + | chr7_4:44735878-44735897 | None:intergenic | 30.0% |
| ! | AAAGAGGATAACCTTACTTT+TGG | + | chr7_4:44735879-44735898 | None:intergenic | 30.0% |
| ! | GTTCTATAAAGGCATAAGAA+AGG | - | chr7_4:44735946-44735965 | Msa1156460:CDS | 30.0% |
| TTCTCCAAAAAGAATGAATG+AGG | + | chr7_4:44736258-44736277 | None:intergenic | 30.0% | |
| !! | CATTCATTCTTTTTGGAGAA+TGG | - | chr7_4:44736258-44736277 | Msa1156460:intron | 30.0% |
| !!! | TTTTTTCAAGTACATGCAAC+AGG | - | chr7_4:44736384-44736403 | Msa1156460:CDS | 30.0% |
| !!! | TTTTTCAAGTACATGCAACA+GGG | - | chr7_4:44736385-44736404 | Msa1156460:CDS | 30.0% |
| AATTGGCATGTTATCATTGA+TGG | - | chr7_4:44736414-44736433 | Msa1156460:CDS | 30.0% | |
| ATTGGCATGTTATCATTGAT+GGG | - | chr7_4:44736415-44736434 | Msa1156460:CDS | 30.0% | |
| CAATCTGTGATTGTAATTTC+AGG | - | chr7_4:44736489-44736508 | Msa1156460:intron | 30.0% | |
| TTGCTATCCTTTCTGATTAA+GGG | + | chr7_4:44736523-44736542 | None:intergenic | 30.0% | |
| ! | ACTGAGTGAGTTTGATAATT+AGG | - | chr7_4:44736552-44736571 | Msa1156460:CDS | 30.0% |
| !! | TTAGGTTTGTTATTTGCCTT+TGG | - | chr7_4:44736570-44736589 | Msa1156460:CDS | 30.0% |
| ! | ACCTTTTTAACATTGATCTG+TGG | - | chr7_4:44736634-44736653 | Msa1156460:exon | 30.0% |
| TCCACAGATCAATGTTAAAA+AGG | + | chr7_4:44736638-44736657 | None:intergenic | 30.0% | |
| GGATTATTACTACACAAAAC+TGG | - | chr7_4:44736655-44736674 | Msa1156460:five_prime_UTR | 30.0% | |
| AAGAAAATGAGAGAAGAGGT+CGG | + | chr7_4:44732810-44732829 | None:intergenic | 35.0% | |
| GTTGAAGAAAATGAGAGAAG+AGG | + | chr7_4:44732814-44732833 | None:intergenic | 35.0% | |
| ! | TGTAATGGGGTTTATTTGGT+TGG | + | chr7_4:44732855-44732874 | None:intergenic | 35.0% |
| !! | GAAATTAACTCGGTGTAATG+GGG | + | chr7_4:44732868-44732887 | None:intergenic | 35.0% |
| !! | GAAACTTGATTGCTTTGAGA+AGG | + | chr7_4:44732962-44732981 | None:intergenic | 35.0% |
| !! | GTATTTCGGTGTTAATCTGA+AGG | - | chr7_4:44733197-44733216 | Msa1156460:three_prime_UTR | 35.0% |
| AAGCGACATGTGATAAAGAA+AGG | - | chr7_4:44733604-44733623 | Msa1156460:intron | 35.0% | |
| ATTGTAAGGCAAAAGATGCA+TGG | + | chr7_4:44733686-44733705 | None:intergenic | 35.0% | |
| AACACACTCATGCAATTGTA+AGG | + | chr7_4:44733700-44733719 | None:intergenic | 35.0% | |
| GCAATATTGCGTATACAGAT+TGG | - | chr7_4:44733833-44733852 | Msa1156460:intron | 35.0% | |
| ATCAATAAATTTGTGGGGAG+TGG | - | chr7_4:44733959-44733978 | Msa1156460:intron | 35.0% | |
| TAGATATCCATTCAGAGACA+TGG | + | chr7_4:44734017-44734036 | None:intergenic | 35.0% | |
| TTGGGATTTATGCAAAGAAC+TGG | + | chr7_4:44734060-44734079 | None:intergenic | 35.0% | |
| ACCAGAATGAATGTGCATTT+GGG | + | chr7_4:44734078-44734097 | None:intergenic | 35.0% | |
| TACCAGAATGAATGTGCATT+TGG | + | chr7_4:44734079-44734098 | None:intergenic | 35.0% | |
| !! | TGTACATTTTGGTGCATTTG+GGG | + | chr7_4:44734110-44734129 | None:intergenic | 35.0% |
| TAGTGTATGTGCAACTACAA+GGG | + | chr7_4:44734177-44734196 | None:intergenic | 35.0% | |
| !! | ATTTTGGTACATTTGAGGCT+TGG | + | chr7_4:44734201-44734220 | None:intergenic | 35.0% |
| AGATAAGTGAGTGTATGAGT+TGG | + | chr7_4:44734357-44734376 | None:intergenic | 35.0% | |
| !!! | AGTTAGCTTTTACTGCATGT+TGG | - | chr7_4:44734447-44734466 | Msa1156460:intron | 35.0% |
| TACTGCATGTTGGAAAACTT+TGG | - | chr7_4:44734457-44734476 | Msa1156460:intron | 35.0% | |
| ACTATATGTTTACGGATCTC+TGG | - | chr7_4:44734638-44734657 | Msa1156460:CDS | 35.0% | |
| TGTATGTTTCCTGTGTTATC+TGG | + | chr7_4:44734666-44734685 | None:intergenic | 35.0% | |
| ACAATGGTTGGATAAGAACT+CGG | - | chr7_4:44734683-44734702 | Msa1156460:CDS | 35.0% | |
| AGAGAAATACCTGTCAGTAT+GGG | + | chr7_4:44734718-44734737 | None:intergenic | 35.0% | |
| AAGAGAAATACCTGTCAGTA+TGG | + | chr7_4:44734719-44734738 | None:intergenic | 35.0% | |
| AAGATCTCAATACAGCATTC+AGG | + | chr7_4:44734944-44734963 | None:intergenic | 35.0% | |
| !! | TAATGGACTGGAGAGTATAA+TGG | + | chr7_4:44735275-44735294 | None:intergenic | 35.0% |
| !! | TCTAAGAGAGTATAATGGAC+TGG | + | chr7_4:44735287-44735306 | None:intergenic | 35.0% |
| ! | AGGTGTCTAAGAGAGTATAA+TGG | + | chr7_4:44735292-44735311 | None:intergenic | 35.0% |
| AGAAATATTTCTTCCAGCAG+AGG | + | chr7_4:44735341-44735360 | None:intergenic | 35.0% | |
| GACACGAAAAAACTGAAGAA+TGG | - | chr7_4:44735406-44735425 | Msa1156460:intron | 35.0% | |
| !!! | TGTTTTGGTGTTCTTCTAAG+GGG | + | chr7_4:44735499-44735518 | None:intergenic | 35.0% |
| !!! | CTGTTTTGGTGTTCTTCTAA+GGG | + | chr7_4:44735500-44735519 | None:intergenic | 35.0% |
| !!! | TCTGTTTTGGTGTTCTTCTA+AGG | + | chr7_4:44735501-44735520 | None:intergenic | 35.0% |
| TGATCTCGTAACAAATTCAG+CGG | - | chr7_4:44735537-44735556 | Msa1156460:intron | 35.0% | |
| TAGATACATTAGGAGATGAG+GGG | + | chr7_4:44735594-44735613 | None:intergenic | 35.0% | |
| GATAGATACATTAGGAGATG+AGG | + | chr7_4:44735596-44735615 | None:intergenic | 35.0% | |
| GTATATGTTAGGGGTAAACA+TGG | + | chr7_4:44735712-44735731 | None:intergenic | 35.0% | |
| ! | TTGGAAAGGGTATATGTTAG+GGG | + | chr7_4:44735721-44735740 | None:intergenic | 35.0% |
| AAAGGGACTTCTTTATGTCA+TGG | - | chr7_4:44735964-44735983 | Msa1156460:intron | 35.0% | |
| CCTTGTGACGTTAGATTATT+CGG | - | chr7_4:44736077-44736096 | Msa1156460:intron | 35.0% | |
| !!! | ACTGTTTTTGTTATTCTCCG+CGG | - | chr7_4:44736146-44736165 | Msa1156460:CDS | 35.0% |
| GGTTAAACAAATACAGATGC+AGG | + | chr7_4:44736237-44736256 | None:intergenic | 35.0% | |
| TTGGCATGTTATCATTGATG+GGG | - | chr7_4:44736416-44736435 | Msa1156460:CDS | 35.0% | |
| ! | ATGGGGTTTATCTCAGTTTT+GGG | - | chr7_4:44736433-44736452 | Msa1156460:intron | 35.0% |
| ! | CTTGCTATCCTTTCTGATTA+AGG | + | chr7_4:44736524-44736543 | None:intergenic | 35.0% |
| ATCAGAAAGGATAGCAAGAT+TGG | - | chr7_4:44736526-44736545 | Msa1156460:intron | 35.0% | |
| !! | TCGGGTTAGTTTGTTAGGTT+GGG | + | chr7_4:44732791-44732810 | None:intergenic | 40.0% |
| AGAAAATGAGAGAAGAGGTC+GGG | + | chr7_4:44732809-44732828 | None:intergenic | 40.0% | |
| !! | GGTTTATTTGGTTGGTGACT+CGG | + | chr7_4:44732847-44732866 | None:intergenic | 40.0% |
| ! | TCGGTGTAATGGGGTTTATT+TGG | + | chr7_4:44732859-44732878 | None:intergenic | 40.0% |
| CAAAACCCTAACTCATCCAA+TGG | - | chr7_4:44732892-44732911 | Msa1156460:three_prime_UTR | 40.0% | |
| TCATCCAATGGAAGGGTTAA+AGG | - | chr7_4:44732904-44732923 | Msa1156460:three_prime_UTR | 40.0% | |
| GAAACCTTTAACCCTTCCAT+TGG | + | chr7_4:44732911-44732930 | None:intergenic | 40.0% | |
| AAAATCTCATCGTAGCTGCA+AGG | + | chr7_4:44733105-44733124 | None:intergenic | 40.0% | |
| ! | AGCTACGATGAGATTTTCGA+CGG | - | chr7_4:44733108-44733127 | Msa1156460:three_prime_UTR | 40.0% |
| ACCGAAATACGGATAAACAC+CGG | + | chr7_4:44733187-44733206 | None:intergenic | 40.0% | |
| ! | CCTATAAGCATATCTGGCTT+GGG | + | chr7_4:44733243-44733262 | None:intergenic | 40.0% |
| ACCTATAAGCATATCTGGCT+TGG | + | chr7_4:44733244-44733263 | None:intergenic | 40.0% | |
| AGTAGAGAAAGTTACACCTG+AGG | - | chr7_4:44733362-44733381 | Msa1156460:intron | 40.0% | |
| GGGAGAGTTCAAATTCACAT+TGG | - | chr7_4:44733443-44733462 | Msa1156460:intron | 40.0% | |
| TAAAGAAAGGAACCATGCTG+CGG | - | chr7_4:44733617-44733636 | Msa1156460:intron | 40.0% | |
| ! | TCCTTTTCCATGTCTCTGAA+TGG | - | chr7_4:44734007-44734026 | Msa1156460:intron | 40.0% |
| TCCATTCAGAGACATGGAAA+AGG | + | chr7_4:44734011-44734030 | None:intergenic | 40.0% | |
| TCCCAAATGCACATTCATTC+TGG | - | chr7_4:44734074-44734093 | Msa1156460:intron | 40.0% | |
| !! | ATTTTGGTGCATTTGGGGTT+TGG | + | chr7_4:44734105-44734124 | None:intergenic | 40.0% |
| CTAGTGTATGTGCAACTACA+AGG | + | chr7_4:44734178-44734197 | None:intergenic | 40.0% | |
| TCTATGTTCTGTAAAGAGCG+AGG | + | chr7_4:44734261-44734280 | None:intergenic | 40.0% | |
| ! | TGAGTTGAACGTTGCATCAT+AGG | - | chr7_4:44734573-44734592 | Msa1156460:three_prime_UTR | 40.0% |
| CACAGGAAACATACAATGGT+TGG | - | chr7_4:44734671-44734690 | Msa1156460:CDS | 40.0% | |
| ! | AAGTTGTTTCCCATACTGAC+AGG | - | chr7_4:44734706-44734725 | Msa1156460:CDS | 40.0% |
| GAAGAAGCAAAAAGTCAGAG+AGG | - | chr7_4:44734915-44734934 | Msa1156460:intron | 40.0% | |
| ! | GCACTGTTTCTTTCTTCACA+AGG | + | chr7_4:44735236-44735255 | None:intergenic | 40.0% |
| !!! | GTTTTGGTGTTCTTCTAAGG+GGG | + | chr7_4:44735498-44735517 | None:intergenic | 40.0% |
| AGATACATTAGGAGATGAGG+GGG | + | chr7_4:44735593-44735612 | None:intergenic | 40.0% | |
| ! | ACAGCCAGAAAATTCAGGTT+GGG | + | chr7_4:44735649-44735668 | None:intergenic | 40.0% |
| CAAACACAGCCAGAAAATTC+AGG | + | chr7_4:44735654-44735673 | None:intergenic | 40.0% | |
| !!! | CTGAATTTTCTGGCTGTGTT+TGG | - | chr7_4:44735652-44735671 | Msa1156460:intron | 40.0% |
| !! | TTTCTGGCTGTGTTTGGTTT+AGG | - | chr7_4:44735658-44735677 | Msa1156460:intron | 40.0% |
| !! | TGTGTTTGGTTTAGGTTGGT+TGG | - | chr7_4:44735666-44735685 | Msa1156460:intron | 40.0% |
| !! | GTGTTTGGTTTAGGTTGGTT+GGG | - | chr7_4:44735667-44735686 | Msa1156460:intron | 40.0% |
| ! | AAAGGGGAGACTAGGTTTTT+GGG | - | chr7_4:44735833-44735852 | Msa1156460:intron | 40.0% |
| !!! | TTTTTGGGTCTAACTTCGTG+TGG | - | chr7_4:44735848-44735867 | Msa1156460:intron | 40.0% |
| GCTCACATAACACTCAATTG+CGG | + | chr7_4:44736058-44736077 | None:intergenic | 40.0% | |
| CCGAATAATCTAACGTCACA+AGG | + | chr7_4:44736080-44736099 | None:intergenic | 40.0% | |
| TTCTACAGCAGGCTACAAAT+GGG | + | chr7_4:44736103-44736122 | None:intergenic | 40.0% | |
| TTTCTACAGCAGGCTACAAA+TGG | + | chr7_4:44736104-44736123 | None:intergenic | 40.0% | |
| ! | CTCTACTATGTTTCTACAGC+AGG | + | chr7_4:44736114-44736133 | None:intergenic | 40.0% |
| AAACATAGTAGAGTCTGTCG+AGG | - | chr7_4:44736121-44736140 | Msa1156460:CDS | 40.0% | |
| ATGCAGAGAAGCTAGGTTTA+TGG | - | chr7_4:44736316-44736335 | Msa1156460:CDS | 40.0% | |
| AGAGAAGCTAGGTTTATGGA+TGG | - | chr7_4:44736320-44736339 | Msa1156460:CDS | 40.0% | |
| GGTTTATGGATGGAAGAGTT+TGG | - | chr7_4:44736330-44736349 | Msa1156460:CDS | 40.0% | |
| ATGCAACAGGGAAAACGAAT+TGG | - | chr7_4:44736397-44736416 | Msa1156460:CDS | 40.0% | |
| ! | GATGGGGTTTATCTCAGTTT+TGG | - | chr7_4:44736432-44736451 | Msa1156460:intron | 40.0% |
| TGCTAGACCCTTAATCAGAA+AGG | - | chr7_4:44736513-44736532 | Msa1156460:intron | 40.0% | |
| TCTGTCATTGATCAGACCAA+AGG | + | chr7_4:44736589-44736608 | None:intergenic | 40.0% | |
| TTGGTCTGATCAATGACAGA+TGG | - | chr7_4:44736589-44736608 | Msa1156460:CDS | 40.0% | |
| !! | GTCGGGTTAGTTTGTTAGGT+TGG | + | chr7_4:44732792-44732811 | None:intergenic | 45.0% |
| !! | AGAGGTCGGGTTAGTTTGTT+AGG | + | chr7_4:44732796-44732815 | None:intergenic | 45.0% |
| !! | TTATTTGGTTGGTGACTCGG+TGG | + | chr7_4:44732844-44732863 | None:intergenic | 45.0% |
| ACCCTAACTCATCCAATGGA+AGG | - | chr7_4:44732896-44732915 | Msa1156460:three_prime_UTR | 45.0% | |
| CCCTTCCATTGGATGAGTTA+GGG | + | chr7_4:44732900-44732919 | None:intergenic | 45.0% | |
| CCCTAACTCATCCAATGGAA+GGG | - | chr7_4:44732897-44732916 | Msa1156460:three_prime_UTR | 45.0% | |
| ACCCTTCCATTGGATGAGTT+AGG | + | chr7_4:44732901-44732920 | None:intergenic | 45.0% | |
| ! | AGTGCTGAGTTCACGAAGAA+CGG | + | chr7_4:44732990-44733009 | None:intergenic | 45.0% |
| ! | GATTTTCGACGGCGTTGTTT+TGG | - | chr7_4:44733119-44733138 | Msa1156460:three_prime_UTR | 45.0% |
| ATAAACACCGGGAAGAACCT+TGG | + | chr7_4:44733175-44733194 | None:intergenic | 45.0% | |
| CCGAAATACGGATAAACACC+GGG | + | chr7_4:44733186-44733205 | None:intergenic | 45.0% | |
| CCCGGTGTTTATCCGTATTT+CGG | - | chr7_4:44733183-44733202 | Msa1156460:three_prime_UTR | 45.0% | |
| CCCAAGCCAGATATGCTTAT+AGG | - | chr7_4:44733240-44733259 | Msa1156460:intron | 45.0% | |
| AGTTAGTTCAGCTGGACACA+AGG | - | chr7_4:44733785-44733804 | Msa1156460:intron | 45.0% | |
| ATATTGCAGAGCTAGAGGGA+TGG | + | chr7_4:44733820-44733839 | None:intergenic | 45.0% | |
| CGCAATATTGCAGAGCTAGA+GGG | + | chr7_4:44733824-44733843 | None:intergenic | 45.0% | |
| ACGCAATATTGCAGAGCTAG+AGG | + | chr7_4:44733825-44733844 | None:intergenic | 45.0% | |
| TCTACAGGAATGTTGCTCAC+TGG | - | chr7_4:44734302-44734321 | Msa1156460:intron | 45.0% | |
| ! | TGAGTTGGCAATGACAGTGT+AGG | + | chr7_4:44734342-44734361 | None:intergenic | 45.0% |
| ACCAACAAGAAAGTCGGAAC+TGG | + | chr7_4:44734499-44734518 | None:intergenic | 45.0% | |
| TAATCGTTGCAGCTTCGATG+AGG | - | chr7_4:44734611-44734630 | Msa1156460:CDS | 45.0% | |
| ! | TCTCTGGTTCCAGATAACAC+AGG | - | chr7_4:44734654-44734673 | Msa1156460:CDS | 45.0% |
| GACACCTTGCACTCAACTAT+AGG | - | chr7_4:44735305-44735324 | Msa1156460:intron | 45.0% | |
| GGATCCTATAGTTGAGTGCA+AGG | + | chr7_4:44735312-44735331 | None:intergenic | 45.0% | |
| TTTCTTCCAGCAGAGGAAGT+GGG | + | chr7_4:44735334-44735353 | None:intergenic | 45.0% | |
| ATTTCTTCCAGCAGAGGAAG+TGG | + | chr7_4:44735335-44735354 | None:intergenic | 45.0% | |
| ! | GCAACCCAACCTGAATTTTC+TGG | - | chr7_4:44735642-44735661 | Msa1156460:intron | 45.0% |
| CACAGCCAGAAAATTCAGGT+TGG | + | chr7_4:44735650-44735669 | None:intergenic | 45.0% | |
| ! | TGGCTGTGTTTGGTTTAGGT+TGG | - | chr7_4:44735662-44735681 | Msa1156460:intron | 45.0% |
| CAAAAACCTAGTCTCCCCTT+TGG | + | chr7_4:44735834-44735853 | None:intergenic | 45.0% | |
| ! | CAAAGGGGAGACTAGGTTTT+TGG | - | chr7_4:44735832-44735851 | Msa1156460:intron | 45.0% |
| ! | AATTCTACAAGCATCGTCCG+CGG | + | chr7_4:44736166-44736185 | None:intergenic | 45.0% |
| ATTGGCAATGCAGAGAAGCT+AGG | - | chr7_4:44736309-44736328 | Msa1156460:CDS | 45.0% | |
| GGACTCGCCATTTGATGTTT+AGG | - | chr7_4:44736351-44736370 | Msa1156460:CDS | 45.0% | |
| GAGTTCACGAAGAACGGCTT+TGG | + | chr7_4:44732984-44733003 | None:intergenic | 50.0% | |
| !! | GGCTTACGACGTTGATTCGT+TGG | - | chr7_4:44733140-44733159 | Msa1156460:three_prime_UTR | 50.0% |
| TTCGTTGGACAAATGCGCCA+AGG | - | chr7_4:44733155-44733174 | Msa1156460:three_prime_UTR | 50.0% | |
| AAATGCGCCAAGGTTCTTCC+CGG | - | chr7_4:44733165-44733184 | Msa1156460:three_prime_UTR | 50.0% | |
| ! | AGGAACCATGCTGCGGTTTT+CGG | - | chr7_4:44733624-44733643 | Msa1156460:intron | 50.0% |
| CTTAACCGAAAACCGCAGCA+TGG | + | chr7_4:44733632-44733651 | None:intergenic | 50.0% | |
| ! | TGCTGCGGTTTTCGGTTAAG+AGG | - | chr7_4:44733632-44733651 | Msa1156460:intron | 50.0% |
| GCCAGTTCCGACTTTCTTGT+TGG | - | chr7_4:44734495-44734514 | Msa1156460:intron | 50.0% | |
| TTCTTCCAGCAGAGGAAGTG+GGG | + | chr7_4:44735333-44735352 | None:intergenic | 50.0% | |
| !! | GTTGGGTTTGCTGATGAACC+AGG | - | chr7_4:44735684-44735703 | Msa1156460:intron | 50.0% |
| TTAGGGGTAAACATGGGTCC+TGG | + | chr7_4:44735705-44735724 | None:intergenic | 50.0% | |
| GTGTTTCCAAAGGGGAGACT+AGG | - | chr7_4:44735825-44735844 | Msa1156460:intron | 50.0% | |
| TTGGGTCTAACTTCGTGTGG+AGG | - | chr7_4:44735851-44735870 | Msa1156460:intron | 50.0% | |
| GTGTGGAGGACCCAAAAGTA+AGG | - | chr7_4:44735865-44735884 | Msa1156460:intron | 50.0% | |
| !! | TTGGTGACTCGGTGGAGAAG+AGG | + | chr7_4:44732836-44732855 | None:intergenic | 55.0% |
| AGGATCCCCACTTCCTCTGC+TGG | - | chr7_4:44735325-44735344 | Msa1156460:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 44732787 | 44736768 | 44732787 | ID=Msa1156460;Name=Msa1156460 |
| chr7_4 | mRNA | 44732787 | 44736768 | 44732787 | ID=Msa1156460-mRNA-1;Parent=Msa1156460;Name=Msa1156460-mRNA-1;_AED=0.07;_eAED=0.07;_QI=124|1|1|1|0.71|0.62|8|468|228 |
| chr7_4 | exon | 44732787 | 44732848 | 44732787 | ID=Msa1156460-mRNA-1:exon:11586;Parent=Msa1156460-mRNA-1 |
| chr7_4 | exon | 44732873 | 44733233 | 44732873 | ID=Msa1156460-mRNA-1:exon:11585;Parent=Msa1156460-mRNA-1 |
| chr7_4 | exon | 44734565 | 44734739 | 44734565 | ID=Msa1156460-mRNA-1:exon:11584;Parent=Msa1156460-mRNA-1 |
| chr7_4 | exon | 44734828 | 44734932 | 44734828 | ID=Msa1156460-mRNA-1:exon:11583;Parent=Msa1156460-mRNA-1 |
| chr7_4 | exon | 44735902 | 44735981 | 44735902 | ID=Msa1156460-mRNA-1:exon:11582;Parent=Msa1156460-mRNA-1 |
| chr7_4 | exon | 44736091 | 44736200 | 44736091 | ID=Msa1156460-mRNA-1:exon:11581;Parent=Msa1156460-mRNA-1 |
| chr7_4 | exon | 44736294 | 44736445 | 44736294 | ID=Msa1156460-mRNA-1:exon:11580;Parent=Msa1156460-mRNA-1 |
| chr7_4 | exon | 44736535 | 44736768 | 44736535 | ID=Msa1156460-mRNA-1:exon:11579;Parent=Msa1156460-mRNA-1 |
| chr7_4 | five_prime_UTR | 44736645 | 44736768 | 44736645 | ID=Msa1156460-mRNA-1:five_prime_utr;Parent=Msa1156460-mRNA-1 |
| chr7_4 | CDS | 44736535 | 44736644 | 44736535 | ID=Msa1156460-mRNA-1:cds;Parent=Msa1156460-mRNA-1 |
| chr7_4 | CDS | 44736294 | 44736445 | 44736294 | ID=Msa1156460-mRNA-1:cds;Parent=Msa1156460-mRNA-1 |
| chr7_4 | CDS | 44736091 | 44736200 | 44736091 | ID=Msa1156460-mRNA-1:cds;Parent=Msa1156460-mRNA-1 |
| chr7_4 | CDS | 44735902 | 44735981 | 44735902 | ID=Msa1156460-mRNA-1:cds;Parent=Msa1156460-mRNA-1 |
| chr7_4 | CDS | 44734828 | 44734932 | 44734828 | ID=Msa1156460-mRNA-1:cds;Parent=Msa1156460-mRNA-1 |
| chr7_4 | CDS | 44734610 | 44734739 | 44734610 | ID=Msa1156460-mRNA-1:cds;Parent=Msa1156460-mRNA-1 |
| chr7_4 | three_prime_UTR | 44734565 | 44734609 | 44734565 | ID=Msa1156460-mRNA-1:three_prime_utr;Parent=Msa1156460-mRNA-1 |
| chr7_4 | three_prime_UTR | 44732873 | 44733233 | 44732873 | ID=Msa1156460-mRNA-1:three_prime_utr;Parent=Msa1156460-mRNA-1 |
| chr7_4 | three_prime_UTR | 44732787 | 44732848 | 44732787 | ID=Msa1156460-mRNA-1:three_prime_utr;Parent=Msa1156460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
