Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029490 | XP_003624241.1 | 96.491 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 7.91e-158 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029490 | A2Q5X5 | 96.491 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 3.78e-158 | 446 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029240 | Msa1029490 | 0.804659 | 1.942399e-49 | -8.615850e-47 |
| Msa0044090 | Msa1029490 | 0.814926 | 1.201001e-51 | -8.615850e-47 |
| Msa0054480 | Msa1029490 | 0.835191 | 1.937160e-56 | -8.615850e-47 |
| Msa0061290 | Msa1029490 | 0.818810 | 1.614094e-52 | -8.615850e-47 |
| Msa0070700 | Msa1029490 | 0.839228 | 1.796674e-57 | -8.615850e-47 |
| Msa0115080 | Msa1029490 | 0.824829 | 6.529378e-54 | -8.615850e-47 |
| Msa0115400 | Msa1029490 | 0.835456 | 1.660971e-56 | -8.615850e-47 |
| Msa0118590 | Msa1029490 | 0.814438 | 1.540475e-51 | -8.615850e-47 |
| Msa0625720 | Msa1029490 | 0.829850 | 4.087466e-55 | -8.615850e-47 |
| Msa0661650 | Msa1029490 | 0.801385 | 9.232499e-49 | -8.615850e-47 |
| Msa0663390 | Msa1029490 | 0.809953 | 1.466608e-50 | -8.615850e-47 |
| Msa0681250 | Msa1029490 | 0.836192 | 1.080536e-56 | -8.615850e-47 |
| Msa0681270 | Msa1029490 | 0.815041 | 1.132699e-51 | -8.615850e-47 |
| Msa0144370 | Msa1029490 | 0.822498 | 2.294208e-53 | -8.615850e-47 |
| Msa0152350 | Msa1029490 | 0.823704 | 1.200313e-53 | -8.615850e-47 |
| Msa0155680 | Msa1029490 | 0.804041 | 2.613175e-49 | -8.615850e-47 |
| Msa0179190 | Msa1029490 | 0.838627 | 2.570394e-57 | -8.615850e-47 |
| Msa0411430 | Msa1029490 | 0.848549 | 5.711541e-60 | -8.615850e-47 |
| Msa1029490 | Msa1030800 | 0.810144 | 1.333592e-50 | -8.615850e-47 |
| Msa1029490 | Msa1066670 | 0.805851 | 1.093497e-49 | -8.615850e-47 |
| Msa1029490 | Msa1153060 | 0.819250 | 1.281584e-52 | -8.615850e-47 |
| Msa1029490 | Msa1156460 | 0.802004 | 6.890043e-49 | -8.615850e-47 |
| Msa1029490 | Msa1162780 | 0.806469 | 8.102603e-50 | -8.615850e-47 |
| Msa1029490 | Msa1179070 | 0.810383 | 1.184315e-50 | -8.615850e-47 |
| Msa1029490 | Msa1245930 | 0.805470 | 1.314204e-49 | -8.615850e-47 |
| Msa1029490 | Msa1263750 | 0.807435 | 5.060850e-50 | -8.615850e-47 |
| Msa1029490 | Msa1263790 | 0.819657 | 1.035185e-52 | -8.615850e-47 |
| Msa1029490 | Msa1303070 | 0.819008 | 1.454913e-52 | -8.615850e-47 |
| Msa1029490 | Msa1352280 | -0.805139 | 1.541891e-49 | -8.615850e-47 |
| Msa1029490 | Msa1392780 | 0.808364 | 3.212302e-50 | -8.615850e-47 |
| Msa1029490 | Msa1425260 | 0.819341 | 1.222138e-52 | -8.615850e-47 |
| Msa0267370 | Msa1029490 | 0.802624 | 5.136092e-49 | -8.615850e-47 |
| Msa0335730 | Msa1029490 | 0.810383 | 1.184535e-50 | -8.615850e-47 |
| Msa0501380 | Msa1029490 | 0.816689 | 4.858537e-52 | -8.615850e-47 |
| Msa0504210 | Msa1029490 | 0.803049 | 4.196305e-49 | -8.615850e-47 |
| Msa0529890 | Msa1029490 | 0.834676 | 2.611765e-56 | -8.615850e-47 |
| Msa0531180 | Msa1029490 | 0.819664 | 1.031137e-52 | -8.615850e-47 |
| Msa0569320 | Msa1029490 | 0.822757 | 1.997339e-53 | -8.615850e-47 |
| Msa0571130 | Msa1029490 | 0.802302 | 5.985189e-49 | -8.615850e-47 |
| Msa0573200 | Msa1029490 | 0.816059 | 6.719946e-52 | -8.615850e-47 |
| Msa0573270 | Msa1029490 | 0.822695 | 2.064371e-53 | -8.615850e-47 |
| Msa0585560 | Msa1029490 | 0.823967 | 1.041509e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029490 | MtrunA17_Chr7g0249871 | 96.491 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 7.28e-162 | 446 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029490 | AT1G75670.2 | 54.124 | 194 | 87 | 1 | 1 | 192 | 1 | 194 | 7.05e-75 | 225 |
| Msa1029490 | AT1G75670.1 | 54.124 | 194 | 87 | 1 | 1 | 192 | 1 | 194 | 7.05e-75 | 225 |
| Msa1029490 | AT1G75670.3 | 53.548 | 155 | 70 | 1 | 1 | 153 | 1 | 155 | 3.54e-56 | 176 |
Find 82 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTATCCTTTCTGATTA+AGG | 0.143791 | 7_1:+62912365 | None:intergenic |
| TCATCCAATGGAAGGGTTAA+AGG | 0.215251 | 7_1:-62916577 | Msa1029490:exon |
| AATTGGCACGTTATCATTAA+TGG | 0.226103 | 7_1:-62912562 | Msa1029490:three_prime_UTR |
| ACTGAGTGAGTTTGATAATT+AGG | 0.237998 | 7_1:-62912334 | Msa1029490:three_prime_UTR |
| CCCAAGCCAGATATGCTTAT+AGG | 0.283996 | 7_1:-62916253 | Msa1029490:intron |
| TGAAATTAACTCGGTGTAAT+GGG | 0.288998 | 7_1:+62916615 | None:intergenic |
| TTCACAGATCAATGTTAAAA+AGG | 0.293283 | 7_1:+62912252 | None:intergenic |
| TTATAACTGAGAAAGATATT+AGG | 0.297974 | 7_1:-62916072 | Msa1029490:CDS |
| TGTATGTTTCCTGTGTTATC+TGG | 0.310557 | 7_1:+62914749 | None:intergenic |
| TTGCTATCCTTTCTGATTAA+GGG | 0.318383 | 7_1:+62912366 | None:intergenic |
| TATAACTGAGAAAGATATTA+GGG | 0.318851 | 7_1:-62916071 | Msa1029490:CDS |
| ATGCAGAGAAGCTAGGTTTA+TGG | 0.320120 | 7_1:-62912661 | Msa1029490:intron |
| ATTGGCACGTTATCATTAAT+GGG | 0.335544 | 7_1:-62912561 | Msa1029490:three_prime_UTR |
| CCCGGTGTTTATCCGTATTT+CGG | 0.337821 | 7_1:-62916310 | Msa1029490:CDS |
| AGAGGTCGGGTTCGTTTGTT+AGG | 0.347485 | 7_1:+62916688 | None:intergenic |
| ACATTACCTATAAGCATATC+TGG | 0.349568 | 7_1:+62916247 | None:intergenic |
| GGACTCGCCATCTGATGTTT+AGG | 0.354660 | 7_1:-62912626 | Msa1029490:three_prime_UTR |
| ACCCTTCCATTGGATGAGTT+AGG | 0.361037 | 7_1:+62916583 | None:intergenic |
| GTCGGGTTCGTTTGTTAGGT+TGG | 0.365914 | 7_1:+62916692 | None:intergenic |
| GGTTTATGGATGGAAGAGTT+TGG | 0.366673 | 7_1:-62912647 | Msa1029490:three_prime_UTR |
| GGTTTATTCGGTTGGTGACT+CGG | 0.376407 | 7_1:+62916637 | None:intergenic |
| GTTATTATTGTTATTGTGCT+TGG | 0.377731 | 7_1:-62916109 | Msa1029490:CDS |
| GCATCTTTATCTGACACTAA+TGG | 0.381229 | 7_1:+62914565 | None:intergenic |
| TCGGTGTAATGGGGTTTATT+CGG | 0.381490 | 7_1:+62916625 | None:intergenic |
| GAGGAACAACTATATGTTTA+CGG | 0.388808 | 7_1:-62914782 | Msa1029490:CDS |
| AGGAATCTTGAATGTTGTAT+TGG | 0.390778 | 7_1:-62914477 | Msa1029490:exon |
| TCGGGTTCGTTTGTTAGGTT+GGG | 0.391581 | 7_1:+62916693 | None:intergenic |
| CTTTACCTGTGAATAAAAGT+TGG | 0.396597 | 7_1:+62914438 | None:intergenic |
| AATTATTACTACACAAAACT+TGG | 0.405902 | 7_1:-62912231 | Msa1029490:three_prime_UTR |
| CCCTTCCATTGGATGAGTTA+GGG | 0.406234 | 7_1:+62916584 | None:intergenic |
| GGCTTACGACGTTGATTCGT+TGG | 0.406796 | 7_1:-62916353 | Msa1029490:CDS |
| TTGAAATTAACTCGGTGTAA+TGG | 0.407608 | 7_1:+62916614 | None:intergenic |
| GAGTTCACGAAGAACGGCTT+TGG | 0.409430 | 7_1:+62916500 | None:intergenic |
| ACCTATAAGCATATCTGGCT+TGG | 0.413600 | 7_1:+62916252 | None:intergenic |
| ATCCAACAGGGAAAACGAAT+TGG | 0.422311 | 7_1:-62912579 | Msa1029490:three_prime_UTR |
| CAATCTATGATTGTAATTTG+AGG | 0.433878 | 7_1:-62912476 | Msa1029490:intron |
| ATTAGGTTTATTATTTGCCT+TGG | 0.438528 | 7_1:-62912317 | Msa1029490:three_prime_UTR |
| ATCAGAAAGGATAGCAAGAT+TGG | 0.448390 | 7_1:-62912360 | Msa1029490:three_prime_UTR |
| ATGAATGTAAACTACTAAGT+TGG | 0.456155 | 7_1:+62916545 | None:intergenic |
| CCTATAAGCATATCTGGCTT+GGG | 0.459710 | 7_1:+62916253 | None:intergenic |
| TGTAATGGGGTTTATTCGGT+TGG | 0.465451 | 7_1:+62916629 | None:intergenic |
| GAAACCTTTAACCCTTCCAT+TGG | 0.479905 | 7_1:+62916573 | None:intergenic |
| ATGCCGAAAACTGAGGTAAA+CGG | 0.484128 | 7_1:+62912533 | None:intergenic |
| CACAGGAAACATACAATGGT+TGG | 0.492470 | 7_1:-62914741 | Msa1029490:CDS |
| TTCAGATTAACACCGAAATA+CGG | 0.507297 | 7_1:+62916298 | None:intergenic |
| AAATGCGCCAAGGTTCTTCC+CGG | 0.515392 | 7_1:-62916328 | Msa1029490:CDS |
| AAGAAAATGAGAGAAGAGGT+CGG | 0.520804 | 7_1:+62916674 | None:intergenic |
| GTATTTCGGTGTTAATCTGA+AGG | 0.522915 | 7_1:-62916296 | Msa1029490:CDS |
| AAGTTGTTTCCCATACTGAC+AGG | 0.524774 | 7_1:-62914706 | Msa1029490:intron |
| ATTGGCAATGCAGAGAAGCT+AGG | 0.538208 | 7_1:-62912668 | Msa1029490:intron |
| AAGCGACATGTGATAAAGAA+AGG | 0.538550 | 7_1:-62915889 | Msa1029490:CDS |
| CAAAACCCTAACTCATCCAA+TGG | 0.544137 | 7_1:-62916589 | Msa1029490:exon |
| GAAACTTGATTGCTTTGAGA+AGG | 0.548730 | 7_1:+62916522 | None:intergenic |
| GTTGAAGAAAATGAGAGAAG+AGG | 0.552782 | 7_1:+62916670 | None:intergenic |
| ACCCTAACTCATCCAATGGA+AGG | 0.556187 | 7_1:-62916585 | Msa1029490:exon |
| AGTGCTGAGTTCACGAAGAA+CGG | 0.556777 | 7_1:+62916494 | None:intergenic |
| TGCTAGACCCTTAATCAGAA+AGG | 0.556885 | 7_1:-62912373 | Msa1029490:three_prime_UTR |
| ACAATAACAATAATAACCTC+AGG | 0.561602 | 7_1:+62916115 | None:intergenic |
| AGAAAATGAGAGAAGAGGTC+GGG | 0.563865 | 7_1:+62916675 | None:intergenic |
| ATAAACACCGGGAAGAACCT+TGG | 0.567628 | 7_1:+62916321 | None:intergenic |
| TTGGTGACTCGGTGGAGAAG+AGG | 0.580797 | 7_1:+62916648 | None:intergenic |
| CCCTAACTCATCCAATGGAA+GGG | 0.580902 | 7_1:-62916584 | Msa1029490:exon |
| CCGAAATACGGATAAACACC+GGG | 0.584646 | 7_1:+62916310 | None:intergenic |
| TAATATACCTAAACATCAGA+TGG | 0.585018 | 7_1:+62912619 | None:intergenic |
| TTCGTTGGACAAATGCGCCA+AGG | 0.588326 | 7_1:-62916338 | Msa1029490:CDS |
| GGGAGAGTTCAAATTCACAT+TGG | 0.603036 | 7_1:-62916050 | Msa1029490:intron |
| GAAATTAACTCGGTGTAATG+GGG | 0.603502 | 7_1:+62916616 | None:intergenic |
| TTGGTCTGATCAATGACAGA+TGG | 0.606621 | 7_1:-62912298 | Msa1029490:three_prime_UTR |
| ACCGAAATACGGATAAACAC+CGG | 0.606771 | 7_1:+62916309 | None:intergenic |
| TTGGCACGTTATCATTAATG+GGG | 0.626331 | 7_1:-62912560 | Msa1029490:three_prime_UTR |
| ACAATGGTTGGATAAGAACT+CGG | 0.646452 | 7_1:-62914729 | Msa1029490:CDS |
| AGAGAAGCTAGGTTTATGGA+TGG | 0.649101 | 7_1:-62912657 | Msa1029490:three_prime_UTR |
| TAATCGTTGCAGCTTCGATG+AGG | 0.651947 | 7_1:-62914801 | Msa1029490:intron |
| TTATTCGGTTGGTGACTCGG+TGG | 0.652647 | 7_1:+62916640 | None:intergenic |
| ATCTGTCATTGATCAGACCA+AGG | 0.661069 | 7_1:+62912300 | None:intergenic |
| CTTAACCGAAAACCGCAGCA+TGG | 0.667040 | 7_1:+62915864 | None:intergenic |
| TGCATATATGCCGAAAACTG+AGG | 0.678358 | 7_1:+62912526 | None:intergenic |
| TCTCTAGTTCCAGATAACAC+AGG | 0.683020 | 7_1:-62914758 | Msa1029490:CDS |
| AGTAGAGAAAGTTACACCTG+AGG | 0.691992 | 7_1:-62916131 | Msa1029490:CDS |
| ATAACACAGGAAACATACAA+TGG | 0.704605 | 7_1:-62914745 | Msa1029490:CDS |
| ATAACTGAGAAAGATATTAG+GGG | 0.708025 | 7_1:-62916070 | Msa1029490:CDS |
| TAAAGAAAGGAACCATGCTG+CGG | 0.718558 | 7_1:-62915876 | Msa1029490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGATTCTATTTTAATTAAA+AGG | - | chr7_1:62914466-62914485 | Msa1029490:three_prime_UTR | 10.0% |
| !! | AAACTCTTTAAATTAATATT+CGG | - | chr7_1:62915371-62915390 | Msa1029490:intron | 10.0% |
| !!! | TAATAAGATAATAATTTTTC+GGG | - | chr7_1:62915475-62915494 | Msa1029490:intron | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | + | chr7_1:62915523-62915542 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | + | chr7_1:62915524-62915543 | None:intergenic | 10.0% |
| !!! | TTTAATGTTAAAGAAATTTT+AGG | - | chr7_1:62916487-62916506 | Msa1029490:CDS | 10.0% |
| !!! | TTAATGTTAAAGAAATTTTA+GGG | - | chr7_1:62916488-62916507 | Msa1029490:CDS | 10.0% |
| !!! | TAAAGTGTTATATTATTAGT+TGG | + | chr7_1:62913279-62913298 | None:intergenic | 15.0% |
| !! | TTGAAAATGAATATATTCAT+AGG | - | chr7_1:62913314-62913333 | Msa1029490:intron | 15.0% |
| !!! | GTAATACTTTTAATTCATAT+AGG | - | chr7_1:62913855-62913874 | Msa1029490:intron | 15.0% |
| !! | TGTATGTTAGAAATTTAAAA+AGG | - | chr7_1:62914670-62914689 | Msa1029490:intron | 15.0% |
| !! | AGAAATTTAAAAAGGTTAAA+AGG | - | chr7_1:62914678-62914697 | Msa1029490:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | - | chr7_1:62915409-62915428 | Msa1029490:intron | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | + | chr7_1:62915447-62915466 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | - | chr7_1:62915807-62915826 | Msa1029490:intron | 15.0% |
| !! | CTCTATAAATTAATAATGTT+AGG | + | chr7_1:62915834-62915853 | None:intergenic | 15.0% |
| !! | TAATCTAATTAATGACAAAT+TGG | - | chr7_1:62916198-62916217 | Msa1029490:intron | 15.0% |
| !! | TAAAAATTCAGTTACATTGA+AGG | + | chr7_1:62912442-62912461 | None:intergenic | 20.0% |
| !!! | AGGTAATGTTGATAATTTTT+TGG | - | chr7_1:62912651-62912670 | Msa1029490:three_prime_UTR | 20.0% |
| !!! | TGGTTTTAAGAAAAAATCAA+AGG | - | chr7_1:62912671-62912690 | Msa1029490:intron | 20.0% |
| !!! | AGTTAGGTTAGTTAATTAAT+TGG | - | chr7_1:62912699-62912718 | Msa1029490:intron | 20.0% |
| !!! | GTTAGGTTAGTTAATTAATT+GGG | - | chr7_1:62912700-62912719 | Msa1029490:intron | 20.0% |
| !! | TTATAACTGAGAAAGATATT+AGG | - | chr7_1:62912812-62912831 | Msa1029490:intron | 20.0% |
| !! | TATAACTGAGAAAGATATTA+GGG | - | chr7_1:62912813-62912832 | Msa1029490:intron | 20.0% |
| !!! | TTTTTCTTTTTGTAGAAACA+TGG | - | chr7_1:62912950-62912969 | Msa1029490:intron | 20.0% |
| !!! | TTTTCTTTTTGTAGAAACAT+GGG | - | chr7_1:62912951-62912970 | Msa1029490:intron | 20.0% |
| !! | ATTAGTTGGTTACATATTTA+TGG | + | chr7_1:62913265-62913284 | None:intergenic | 20.0% |
| !! | TTCCATATCAATAAATTTGT+GGG | - | chr7_1:62913344-62913363 | Msa1029490:intron | 20.0% |
| !! | ATATCTAGTATCTACTATTA+AGG | - | chr7_1:62913421-62913440 | Msa1029490:intron | 20.0% |
| !!! | TTGTTCATTTTTGTACATTT+TGG | + | chr7_1:62913512-62913531 | None:intergenic | 20.0% |
| !!! | TTGTACATTTTGGTAAATTT+GGG | + | chr7_1:62913604-62913623 | None:intergenic | 20.0% |
| !!! | TTTGTACATTTTGGTAAATT+TGG | + | chr7_1:62913605-62913624 | None:intergenic | 20.0% |
| !!! | GTTATAACTTTTGTACATTT+TGG | + | chr7_1:62913614-62913633 | None:intergenic | 20.0% |
| !!! | ACTTTTAATTCATATAGGAT+AGG | - | chr7_1:62913860-62913879 | Msa1029490:intron | 20.0% |
| !!! | CTTTGACATTTTTAGTTTTT+GGG | + | chr7_1:62914371-62914390 | None:intergenic | 20.0% |
| !!! | TCTTTGACATTTTTAGTTTT+TGG | + | chr7_1:62914372-62914391 | None:intergenic | 20.0% |
| !! | TAATAACACTACATTAAAAG+CGG | + | chr7_1:62915321-62915340 | None:intergenic | 20.0% |
| !! | TAAATTAATAATGTTAGGAC+CGG | + | chr7_1:62915829-62915848 | None:intergenic | 20.0% |
| !! | AATTATTACTACACAAAACT+TGG | - | chr7_1:62916653-62916672 | Msa1029490:five_prime_UTR | 20.0% |
| !!! | GTTTTGAGTTGAAATTAACT+CGG | + | chr7_1:62912281-62912300 | None:intergenic | 25.0% |
| ! | ATGAATGTAAACTACTAAGT+TGG | + | chr7_1:62912342-62912361 | None:intergenic | 25.0% |
| ! | AAAATCAAAGGAATTGAGTT+AGG | - | chr7_1:62912683-62912702 | Msa1029490:intron | 25.0% |
| ! | ACAATAACAATAATAACCTC+AGG | + | chr7_1:62912772-62912791 | None:intergenic | 25.0% |
| !! | GTTATTATTGTTATTGTGCT+TGG | - | chr7_1:62912775-62912794 | Msa1029490:intron | 25.0% |
| ! | ATAACTGAGAAAGATATTAG+GGG | - | chr7_1:62912814-62912833 | Msa1029490:intron | 25.0% |
| !! | TTTCTTTTTGTAGAAACATG+GGG | - | chr7_1:62912952-62912971 | Msa1029490:intron | 25.0% |
| !! | ATTTTCAACCAATGATATAG+TGG | + | chr7_1:62913302-62913321 | None:intergenic | 25.0% |
| ! | CTTCCATATCAATAAATTTG+TGG | - | chr7_1:62913343-62913362 | Msa1029490:intron | 25.0% |
| ! | TCCATATCAATAAATTTGTG+GGG | - | chr7_1:62913345-62913364 | Msa1029490:intron | 25.0% |
| !!! | TTGTACATTTTGGTACATTT+GGG | + | chr7_1:62913502-62913521 | None:intergenic | 25.0% |
| !!! | TTTGTACATTTTGGTACATT+TGG | + | chr7_1:62913503-62913522 | None:intergenic | 25.0% |
| !!! | TGTACATTTTGGTAAATTTG+GGG | + | chr7_1:62913603-62913622 | None:intergenic | 25.0% |
| !! | TCCTGTAGATCAATTTTTAA+GGG | + | chr7_1:62913764-62913783 | None:intergenic | 25.0% |
| !! | TTCCTGTAGATCAATTTTTA+AGG | + | chr7_1:62913765-62913784 | None:intergenic | 25.0% |
| ! | ACCCTGTAAAGTTTAAATTT+GGG | - | chr7_1:62914019-62914038 | Msa1029490:intron | 25.0% |
| ! | TGTATCTTAGAAAACTTTAC+AGG | - | chr7_1:62914266-62914285 | Msa1029490:intron | 25.0% |
| ! | GCGTATGTTAGAATTTAAAA+AGG | - | chr7_1:62914579-62914598 | Msa1029490:CDS | 25.0% |
| ! | AGAGAAAAAAGGTAAATACA+AGG | - | chr7_1:62914835-62914854 | Msa1029490:intron | 25.0% |
| ! | GAGAAAAAAGGTAAATACAA+GGG | - | chr7_1:62914836-62914855 | Msa1029490:intron | 25.0% |
| ! | GTATCAAACATAAAAAGACT+GGG | + | chr7_1:62914893-62914912 | None:intergenic | 25.0% |
| ! | TGTATCAAACATAAAAAGAC+TGG | + | chr7_1:62914894-62914913 | None:intergenic | 25.0% |
| ! | TATTCACTCAAATTTGGAAA+GGG | + | chr7_1:62915156-62915175 | None:intergenic | 25.0% |
| !! | CTTTTCTATTCACTCAAATT+TGG | + | chr7_1:62915162-62915181 | None:intergenic | 25.0% |
| !! | AATGTAGTGTTATTATAGAC+AGG | - | chr7_1:62915326-62915345 | Msa1029490:intron | 25.0% |
| ! | TGTATTTCTTTGTTCTATCA+AGG | - | chr7_1:62915861-62915880 | Msa1029490:intron | 25.0% |
| ! | TGTTATGACGTTAGATTATT+CGG | - | chr7_1:62916003-62916022 | Msa1029490:intron | 25.0% |
| !! | TTAACCTCATTCATTCTTTT+TGG | - | chr7_1:62916158-62916177 | Msa1029490:intron | 25.0% |
| ! | TAATATACCTAAACATCAGA+TGG | + | chr7_1:62916268-62916287 | None:intergenic | 25.0% |
| ! | CAATCTATGATTGTAATTTG+AGG | - | chr7_1:62916408-62916427 | Msa1029490:intron | 25.0% |
| ! | AAATAATAAAAGACAGTACG+AGG | + | chr7_1:62916469-62916488 | None:intergenic | 25.0% |
| ! | ATTAGGTTTATTATTTGCCT+TGG | - | chr7_1:62916567-62916586 | Msa1029490:CDS | 25.0% |
| ! | TTCACAGATCAATGTTAAAA+AGG | + | chr7_1:62916635-62916654 | None:intergenic | 25.0% |
| !! | TGAAATTAACTCGGTGTAAT+GGG | + | chr7_1:62912272-62912291 | None:intergenic | 30.0% |
| !! | TTGAAATTAACTCGGTGTAA+TGG | + | chr7_1:62912273-62912292 | None:intergenic | 30.0% |
| AAATTCAGTTACATTGAAGG+TGG | + | chr7_1:62912439-62912458 | None:intergenic | 30.0% | |
| TTCAGATTAACACCGAAATA+CGG | + | chr7_1:62912589-62912608 | None:intergenic | 30.0% | |
| ACATTACCTATAAGCATATC+TGG | + | chr7_1:62912640-62912659 | None:intergenic | 30.0% | |
| !!! | TGTTGTGTTGTTTTTTCAGA+AGG | - | chr7_1:62912727-62912746 | Msa1029490:intron | 30.0% |
| ACAACAACTACGAAAACATT+CGG | + | chr7_1:62912872-62912891 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGTCTTATTGTGT+CGG | - | chr7_1:62912885-62912904 | Msa1029490:intron | 30.0% |
| !!! | GATATTTTAGTTAGTTCAGC+TGG | - | chr7_1:62913168-62913187 | Msa1029490:intron | 30.0% |
| ACACTTTACCACTATATCAT+TGG | - | chr7_1:62913291-62913310 | Msa1029490:intron | 30.0% | |
| TCCCCACAAATTTATTGATA+TGG | + | chr7_1:62913349-62913368 | None:intergenic | 30.0% | |
| ATCCCAAATACACATTCATT+CGG | - | chr7_1:62913464-62913483 | Msa1029490:intron | 30.0% | |
| !! | TGTACATTTTGGTACATTTG+GGG | + | chr7_1:62913501-62913520 | None:intergenic | 30.0% |
| AGATGTTTCCAAAATTCAGT+CGG | + | chr7_1:62913548-62913567 | None:intergenic | 30.0% | |
| !! | TGAATTTTGGAAACATCTTG+TGG | - | chr7_1:62913550-62913569 | Msa1029490:intron | 30.0% |
| !! | ATTTTGGTAAATTTGGGGTT+TGG | + | chr7_1:62913598-62913617 | None:intergenic | 30.0% |
| !! | ATAACACACTGACTGAATTT+TGG | - | chr7_1:62913629-62913648 | Msa1029490:intron | 30.0% |
| !! | ACTTTTGTACATTTGAAGCT+TGG | + | chr7_1:62913684-62913703 | None:intergenic | 30.0% |
| !! | ATAACTCACTGACTGAATTT+TGG | - | chr7_1:62913705-62913724 | Msa1029490:intron | 30.0% |
| ACCCTTAAAAATTGATCTAC+AGG | - | chr7_1:62913760-62913779 | Msa1029490:intron | 30.0% | |
| ! | TGTTAACTTTTACTGCATGT+TGG | - | chr7_1:62913920-62913939 | Msa1029490:intron | 30.0% |
| GACCCTGTAAAGTTTAAATT+TGG | - | chr7_1:62914018-62914037 | Msa1029490:intron | 30.0% | |
| GCCCAAATTTAAACTTTACA+GGG | + | chr7_1:62914023-62914042 | None:intergenic | 30.0% | |
| AGCCCAAATTTAAACTTTAC+AGG | + | chr7_1:62914024-62914043 | None:intergenic | 30.0% | |
| GAGGAACAACTATATGTTTA+CGG | - | chr7_1:62914102-62914121 | Msa1029490:intron | 30.0% | |
| ATAACACAGGAAACATACAA+TGG | - | chr7_1:62914139-62914158 | Msa1029490:intron | 30.0% | |
| AGGAATCTTGAATGTTGTAT+TGG | - | chr7_1:62914407-62914426 | Msa1029490:intron | 30.0% | |
| ! | GTAATCCAACTTTTATTCAC+AGG | - | chr7_1:62914441-62914460 | Msa1029490:intron | 30.0% |
| CTTTACCTGTGAATAAAAGT+TGG | + | chr7_1:62914449-62914468 | None:intergenic | 30.0% | |
| TCAACTTGTGAAGAAAGAAA+TGG | - | chr7_1:62914701-62914720 | Msa1029490:intron | 30.0% | |
| AGTCCATTATAACTCTCTTA+AGG | - | chr7_1:62914740-62914759 | Msa1029490:CDS | 30.0% | |
| GTCCATTATAACTCTCTTAA+GGG | - | chr7_1:62914741-62914760 | Msa1029490:CDS | 30.0% | |
| CACATAGAATTCTTCTCTAT+TGG | + | chr7_1:62914812-62914831 | None:intergenic | 30.0% | |
| TCTATGTGCATAGAGAAAAA+AGG | - | chr7_1:62914824-62914843 | Msa1029490:intron | 30.0% | |
| AAAAAACCGAAGAATGGTTA+TGG | - | chr7_1:62914864-62914883 | Msa1029490:intron | 30.0% | |
| !!! | TGTTTTGATGTTCTTCTAAG+GGG | + | chr7_1:62914922-62914941 | None:intergenic | 30.0% |
| !!! | CTGTTTTGATGTTCTTCTAA+GGG | + | chr7_1:62914923-62914942 | None:intergenic | 30.0% |
| !!! | TCTGTTTTGATGTTCTTCTA+AGG | + | chr7_1:62914924-62914943 | None:intergenic | 30.0% |
| TGATCTTGTAACAAATTCAG+CGG | - | chr7_1:62914960-62914979 | Msa1029490:intron | 30.0% | |
| AACTCTTTGCTAGATACATT+AGG | + | chr7_1:62915026-62915045 | None:intergenic | 30.0% | |
| !! | TTTGTTTAGTTTAGGTTGGT+TGG | - | chr7_1:62915088-62915107 | Msa1029490:intron | 30.0% |
| !! | TTGTTTAGTTTAGGTTGGTT+GGG | - | chr7_1:62915089-62915108 | Msa1029490:intron | 30.0% |
| TATATGTTAGGGGTAAACAT+GGG | + | chr7_1:62915133-62915152 | None:intergenic | 30.0% | |
| ! | TTTGGAAAGGGTATATGTTA+GGG | + | chr7_1:62915144-62915163 | None:intergenic | 30.0% |
| ! | ATTTGGAAAGGGTATATGTT+AGG | + | chr7_1:62915145-62915164 | None:intergenic | 30.0% |
| CTATTCACTCAAATTTGGAA+AGG | + | chr7_1:62915157-62915176 | None:intergenic | 30.0% | |
| TGAGTGAATAGAAAAGTGAA+AGG | - | chr7_1:62915166-62915185 | Msa1029490:intron | 30.0% | |
| ATTCACAAACTTTCTCAAAC+AGG | - | chr7_1:62915190-62915209 | Msa1029490:intron | 30.0% | |
| CTCAATTAAGTGTTTCCAAA+GGG | - | chr7_1:62915238-62915257 | Msa1029490:intron | 30.0% | |
| TCAATTAAGTGTTTCCAAAG+GGG | - | chr7_1:62915239-62915258 | Msa1029490:intron | 30.0% | |
| ! | GGAGATCCCTTTATAATTTT+CGG | - | chr7_1:62915496-62915515 | Msa1029490:intron | 30.0% |
| TTGGGACCGAAAATTATAAA+GGG | + | chr7_1:62915505-62915524 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | + | chr7_1:62915596-62915615 | None:intergenic | 30.0% | |
| ACTACTGTGTTCATATACAT+TGG | + | chr7_1:62915640-62915659 | None:intergenic | 30.0% | |
| !! | GACTAATTTGCCTTTTTGTT+TGG | - | chr7_1:62915714-62915733 | Msa1029490:intron | 30.0% |
| ACTGTACATACCAAACAAAA+AGG | + | chr7_1:62915727-62915746 | None:intergenic | 30.0% | |
| TTCTCCAAAAAGAATGAATG+AGG | + | chr7_1:62916165-62916184 | None:intergenic | 30.0% | |
| !! | CATTCATTCTTTTTGGAGAA+TGG | - | chr7_1:62916165-62916184 | Msa1029490:intron | 30.0% |
| !!! | TTTTTTCAAGTACATCCAAC+AGG | - | chr7_1:62916292-62916311 | Msa1029490:CDS | 30.0% |
| !!! | TTTTTCAAGTACATCCAACA+GGG | - | chr7_1:62916293-62916312 | Msa1029490:CDS | 30.0% |
| AATTGGCACGTTATCATTAA+TGG | - | chr7_1:62916322-62916341 | Msa1029490:CDS | 30.0% | |
| ATTGGCACGTTATCATTAAT+GGG | - | chr7_1:62916323-62916342 | Msa1029490:CDS | 30.0% | |
| TTGCTATCCTTTCTGATTAA+GGG | + | chr7_1:62916521-62916540 | None:intergenic | 30.0% | |
| ! | ACTGAGTGAGTTTGATAATT+AGG | - | chr7_1:62916550-62916569 | Msa1029490:CDS | 30.0% |
| AAGAAAATGAGAGAAGAGGT+CGG | + | chr7_1:62912213-62912232 | None:intergenic | 35.0% | |
| GTTGAAGAAAATGAGAGAAG+AGG | + | chr7_1:62912217-62912236 | None:intergenic | 35.0% | |
| !! | GAAATTAACTCGGTGTAATG+GGG | + | chr7_1:62912271-62912290 | None:intergenic | 35.0% |
| !! | GAAACTTGATTGCTTTGAGA+AGG | + | chr7_1:62912365-62912384 | None:intergenic | 35.0% |
| !! | GTATTTCGGTGTTAATCTGA+AGG | - | chr7_1:62912588-62912607 | Msa1029490:three_prime_UTR | 35.0% |
| AAGCGACATGTGATAAAGAA+AGG | - | chr7_1:62912995-62913014 | Msa1029490:intron | 35.0% | |
| ATTGTAAGGCAAAAGATGCA+TGG | + | chr7_1:62913077-62913096 | None:intergenic | 35.0% | |
| AACACACTCATGCAATTGTA+AGG | + | chr7_1:62913091-62913110 | None:intergenic | 35.0% | |
| GCAATATTGCGTATACAGAT+TGG | - | chr7_1:62913224-62913243 | Msa1029490:intron | 35.0% | |
| ATCAATAAATTTGTGGGGAG+TGG | - | chr7_1:62913350-62913369 | Msa1029490:intron | 35.0% | |
| TAGATATCCATTCAGAGACA+TGG | + | chr7_1:62913408-62913427 | None:intergenic | 35.0% | |
| TTGGGATTTATGCAAAGAAC+TGG | + | chr7_1:62913451-62913470 | None:intergenic | 35.0% | |
| TCCCAAATACACATTCATTC+GGG | - | chr7_1:62913465-62913484 | Msa1029490:intron | 35.0% | |
| ACCCGAATGAATGTGTATTT+GGG | + | chr7_1:62913469-62913488 | None:intergenic | 35.0% | |
| TACCCGAATGAATGTGTATT+TGG | + | chr7_1:62913470-62913489 | None:intergenic | 35.0% | |
| !! | ATTTTGGTACATTTGGGGTA+TGG | + | chr7_1:62913496-62913515 | None:intergenic | 35.0% |
| !! | ATAACTCACCGACTGAATTT+TGG | - | chr7_1:62913537-62913556 | Msa1029490:intron | 35.0% |
| TAGTGTATGTGCAACTACAA+GGG | + | chr7_1:62913660-62913679 | None:intergenic | 35.0% | |
| ! | AGGGTTCATTTTCTATGTTC+TGG | + | chr7_1:62913745-62913764 | None:intergenic | 35.0% |
| AGATAAGTGAGTGTATGAGT+TGG | + | chr7_1:62913830-62913849 | None:intergenic | 35.0% | |
| TACTGCATGTTGGAAAACTT+TGG | - | chr7_1:62913930-62913949 | Msa1029490:intron | 35.0% | |
| TGTATGTTTCCTGTGTTATC+TGG | + | chr7_1:62914138-62914157 | None:intergenic | 35.0% | |
| ACAATGGTTGGATAAGAACT+CGG | - | chr7_1:62914155-62914174 | Msa1029490:intron | 35.0% | |
| AGAGAAAAACCTGTCAGTAT+GGG | + | chr7_1:62914190-62914209 | None:intergenic | 35.0% | |
| AAGAGAAAAACCTGTCAGTA+TGG | + | chr7_1:62914191-62914210 | None:intergenic | 35.0% | |
| ACGAAAAAGAGAGAAAAGGA+GGG | - | chr7_1:62914292-62914311 | Msa1029490:intron | 35.0% | |
| GCATCTTTATCTGACACTAA+TGG | + | chr7_1:62914322-62914341 | None:intergenic | 35.0% | |
| AAAGAAGCAAAAAGTCAGAG+AGG | - | chr7_1:62914387-62914406 | Msa1029490:intron | 35.0% | |
| TGCCCTTAAGAGAGTTATAA+TGG | + | chr7_1:62914746-62914765 | None:intergenic | 35.0% | |
| GGAAATATTTCTTCCAACAG+AGG | + | chr7_1:62914791-62914810 | None:intergenic | 35.0% | |
| !! | GTTTTGATGTTCTTCTAAGG+GGG | + | chr7_1:62914921-62914940 | None:intergenic | 35.0% |
| TAGATACATTAGGAGACTAG+GGG | + | chr7_1:62915016-62915035 | None:intergenic | 35.0% | |
| CTAGATACATTAGGAGACTA+GGG | + | chr7_1:62915017-62915036 | None:intergenic | 35.0% | |
| TAAACAAAGCCAGACAATTC+AGG | + | chr7_1:62915076-62915095 | None:intergenic | 35.0% | |
| !! | TGTCTGGCTTTGTTTAGTTT+AGG | - | chr7_1:62915080-62915099 | Msa1029490:intron | 35.0% |
| !! | TGGCTTTGTTTAGTTTAGGT+TGG | - | chr7_1:62915084-62915103 | Msa1029490:intron | 35.0% |
| GTATATGTTAGGGGTAAACA+TGG | + | chr7_1:62915134-62915153 | None:intergenic | 35.0% | |
| ! | TTGGAAAGGGTATATGTTAG+GGG | + | chr7_1:62915143-62915162 | None:intergenic | 35.0% |
| ! | CCTTTGGAAACACTTAATTG+AGG | + | chr7_1:62915240-62915259 | None:intergenic | 35.0% |
| CCTCAATTAAGTGTTTCCAA+AGG | - | chr7_1:62915237-62915256 | Msa1029490:intron | 35.0% | |
| ! | CGGAATGATAACCTTACTTT+TGG | + | chr7_1:62915301-62915320 | None:intergenic | 35.0% |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | + | chr7_1:62915437-62915456 | None:intergenic | 35.0% |
| CTTGGGACCGAAAATTATAA+AGG | + | chr7_1:62915506-62915525 | None:intergenic | 35.0% | |
| CTAATTTACGTTGAGTCTCA+AGG | - | chr7_1:62915662-62915681 | Msa1029490:intron | 35.0% | |
| TTCTATCAAGGCATGAGAAA+GGG | - | chr7_1:62915873-62915892 | Msa1029490:CDS | 35.0% | |
| AAAGGGACTTCTTTATGTCA+CGG | - | chr7_1:62915890-62915909 | Msa1029490:CDS | 35.0% | |
| GGTTAAACAAATACAGATGC+AGG | + | chr7_1:62916144-62916163 | None:intergenic | 35.0% | |
| TTGGCACGTTATCATTAATG+GGG | - | chr7_1:62916324-62916343 | Msa1029490:CDS | 35.0% | |
| ! | TTACCGTTTACCTCAGTTTT+CGG | - | chr7_1:62916348-62916367 | Msa1029490:CDS | 35.0% |
| CACACTTTAAACTAGAAGCA+CGG | + | chr7_1:62916436-62916455 | None:intergenic | 35.0% | |
| ! | CTTGCTATCCTTTCTGATTA+AGG | + | chr7_1:62916522-62916541 | None:intergenic | 35.0% |
| ATCAGAAAGGATAGCAAGAT+TGG | - | chr7_1:62916524-62916543 | Msa1029490:CDS | 35.0% | |
| AGAAAATGAGAGAAGAGGTC+GGG | + | chr7_1:62912212-62912231 | None:intergenic | 40.0% | |
| ! | TGTAATGGGGTTTATTCGGT+TGG | + | chr7_1:62912258-62912277 | None:intergenic | 40.0% |
| ! | TCGGTGTAATGGGGTTTATT+CGG | + | chr7_1:62912262-62912281 | None:intergenic | 40.0% |
| CAAAACCCTAACTCATCCAA+TGG | - | chr7_1:62912295-62912314 | Msa1029490:three_prime_UTR | 40.0% | |
| TCATCCAATGGAAGGGTTAA+AGG | - | chr7_1:62912307-62912326 | Msa1029490:three_prime_UTR | 40.0% | |
| GAAACCTTTAACCCTTCCAT+TGG | + | chr7_1:62912314-62912333 | None:intergenic | 40.0% | |
| AAAATCTCATCGTAGCTGCA+AGG | + | chr7_1:62912496-62912515 | None:intergenic | 40.0% | |
| ! | AGCTACGATGAGATTTTCGA+CGG | - | chr7_1:62912499-62912518 | Msa1029490:three_prime_UTR | 40.0% |
| ACCGAAATACGGATAAACAC+CGG | + | chr7_1:62912578-62912597 | None:intergenic | 40.0% | |
| ! | CCTATAAGCATATCTGGCTT+GGG | + | chr7_1:62912634-62912653 | None:intergenic | 40.0% |
| ACCTATAAGCATATCTGGCT+TGG | + | chr7_1:62912635-62912654 | None:intergenic | 40.0% | |
| AGTAGAGAAAGTTACACCTG+AGG | - | chr7_1:62912753-62912772 | Msa1029490:intron | 40.0% | |
| GGGAGAGTTCAAATTCACAT+TGG | - | chr7_1:62912834-62912853 | Msa1029490:intron | 40.0% | |
| TAAAGAAAGGAACCATGCTG+CGG | - | chr7_1:62913008-62913027 | Msa1029490:intron | 40.0% | |
| ! | TCCTTTTCCATGTCTCTGAA+TGG | - | chr7_1:62913398-62913417 | Msa1029490:intron | 40.0% |
| TCCATTCAGAGACATGGAAA+AGG | + | chr7_1:62913402-62913421 | None:intergenic | 40.0% | |
| CTAGTGTATGTGCAACTACA+AGG | + | chr7_1:62913661-62913680 | None:intergenic | 40.0% | |
| TCGATGTTTATGCACCTACA+CGG | - | chr7_1:62913798-62913817 | Msa1029490:intron | 40.0% | |
| ACCAACAAGAAAGTCAGAAC+TGG | + | chr7_1:62913972-62913991 | None:intergenic | 40.0% | |
| ! | TCTCTAGTTCCAGATAACAC+AGG | - | chr7_1:62914126-62914145 | Msa1029490:intron | 40.0% |
| CACAGGAAACATACAATGGT+TGG | - | chr7_1:62914143-62914162 | Msa1029490:intron | 40.0% | |
| ! | AAGTTGTTTCCCATACTGAC+AGG | - | chr7_1:62914178-62914197 | Msa1029490:intron | 40.0% |
| GAGCACGAAAAAGAGAGAAA+AGG | - | chr7_1:62914288-62914307 | Msa1029490:intron | 40.0% | |
| CACGAAAAAGAGAGAAAAGG+AGG | - | chr7_1:62914291-62914310 | Msa1029490:intron | 40.0% | |
| CGAAAAAGAGAGAAAAGGAG+GGG | - | chr7_1:62914293-62914312 | Msa1029490:intron | 40.0% | |
| !! | TCTTAAGGGCACTCAACTAT+AGG | - | chr7_1:62914755-62914774 | Msa1029490:CDS | 40.0% |
| TTTCTTCCAACAGAGGAAGT+GGG | + | chr7_1:62914784-62914803 | None:intergenic | 40.0% | |
| ATTTCTTCCAACAGAGGAAG+TGG | + | chr7_1:62914785-62914804 | None:intergenic | 40.0% | |
| GACACGAAAAAACCGAAGAA+TGG | - | chr7_1:62914858-62914877 | Msa1029490:intron | 40.0% | |
| GCTAGATACATTAGGAGACT+AGG | + | chr7_1:62915018-62915037 | None:intergenic | 40.0% | |
| ! | AAAGCCAGACAATTCAGGTT+GGG | + | chr7_1:62915071-62915090 | None:intergenic | 40.0% |
| ! | AAAGGGGAGACTAGGTTTTT+GGG | - | chr7_1:62915255-62915274 | Msa1029490:intron | 40.0% |
| !!! | TTTTTGGGTCTAACTTCGTG+TGG | - | chr7_1:62915270-62915289 | Msa1029490:intron | 40.0% |
| ! | TTTTTACATTGGCCCAAGTC+GGG | + | chr7_1:62915436-62915455 | None:intergenic | 40.0% |
| GTTCTATCAAGGCATGAGAA+AGG | - | chr7_1:62915872-62915891 | Msa1029490:CDS | 40.0% | |
| GTTCAATATAATCGATGCCG+CGG | - | chr7_1:62915964-62915983 | Msa1029490:intron | 40.0% | |
| TCAACAGACTCGCTACAAAT+GGG | + | chr7_1:62916029-62916048 | None:intergenic | 40.0% | |
| ! | GATTCTACAAGCATTGTCTG+CGG | + | chr7_1:62916073-62916092 | None:intergenic | 40.0% |
| ATGCAGAGAAGCTAGGTTTA+TGG | - | chr7_1:62916223-62916242 | Msa1029490:intron | 40.0% | |
| AGAGAAGCTAGGTTTATGGA+TGG | - | chr7_1:62916227-62916246 | Msa1029490:intron | 40.0% | |
| GGTTTATGGATGGAAGAGTT+TGG | - | chr7_1:62916237-62916256 | Msa1029490:intron | 40.0% | |
| ATCCAACAGGGAAAACGAAT+TGG | - | chr7_1:62916305-62916324 | Msa1029490:CDS | 40.0% | |
| ATGCCGAAAACTGAGGTAAA+CGG | + | chr7_1:62916354-62916373 | None:intergenic | 40.0% | |
| TGCATATATGCCGAAAACTG+AGG | + | chr7_1:62916361-62916380 | None:intergenic | 40.0% | |
| TGCTAGACCCTTAATCAGAA+AGG | - | chr7_1:62916511-62916530 | Msa1029490:CDS | 40.0% | |
| ATCTGTCATTGATCAGACCA+AGG | + | chr7_1:62916587-62916606 | None:intergenic | 40.0% | |
| TTGGTCTGATCAATGACAGA+TGG | - | chr7_1:62916586-62916605 | Msa1029490:exon | 40.0% | |
| ! | TCGGGTTCGTTTGTTAGGTT+GGG | + | chr7_1:62912194-62912213 | None:intergenic | 45.0% |
| !! | GGTTTATTCGGTTGGTGACT+CGG | + | chr7_1:62912250-62912269 | None:intergenic | 45.0% |
| ACCCTAACTCATCCAATGGA+AGG | - | chr7_1:62912299-62912318 | Msa1029490:three_prime_UTR | 45.0% | |
| CCCTTCCATTGGATGAGTTA+GGG | + | chr7_1:62912303-62912322 | None:intergenic | 45.0% | |
| CCCTAACTCATCCAATGGAA+GGG | - | chr7_1:62912300-62912319 | Msa1029490:three_prime_UTR | 45.0% | |
| ACCCTTCCATTGGATGAGTT+AGG | + | chr7_1:62912304-62912323 | None:intergenic | 45.0% | |
| ! | AGTGCTGAGTTCACGAAGAA+CGG | + | chr7_1:62912393-62912412 | None:intergenic | 45.0% |
| ! | GATTTTCGACGGCGTTGTTT+TGG | - | chr7_1:62912510-62912529 | Msa1029490:three_prime_UTR | 45.0% |
| ATAAACACCGGGAAGAACCT+TGG | + | chr7_1:62912566-62912585 | None:intergenic | 45.0% | |
| CCGAAATACGGATAAACACC+GGG | + | chr7_1:62912577-62912596 | None:intergenic | 45.0% | |
| CCCGGTGTTTATCCGTATTT+CGG | - | chr7_1:62912574-62912593 | Msa1029490:three_prime_UTR | 45.0% | |
| CCCAAGCCAGATATGCTTAT+AGG | - | chr7_1:62912631-62912650 | Msa1029490:three_prime_UTR | 45.0% | |
| AGTTAGTTCAGCTGGACACA+AGG | - | chr7_1:62913176-62913195 | Msa1029490:intron | 45.0% | |
| ATATTGCAGAGCTAGAGGGA+TGG | + | chr7_1:62913211-62913230 | None:intergenic | 45.0% | |
| CGCAATATTGCAGAGCTAGA+GGG | + | chr7_1:62913215-62913234 | None:intergenic | 45.0% | |
| ACGCAATATTGCAGAGCTAG+AGG | + | chr7_1:62913216-62913235 | None:intergenic | 45.0% | |
| !! | TCTATGTTCTGGAAAGAGCG+AGG | + | chr7_1:62913734-62913753 | None:intergenic | 45.0% |
| TCTACAGGAATGTTGCTCAC+TGG | - | chr7_1:62913775-62913794 | Msa1029490:intron | 45.0% | |
| ! | GCCAGTTCTGACTTTCTTGT+TGG | - | chr7_1:62913968-62913987 | Msa1029490:intron | 45.0% |
| TAATCGTTGCAGCTTCGATG+AGG | - | chr7_1:62914083-62914102 | Msa1029490:intron | 45.0% | |
| GGGCAACCATAACCATTCTT+CGG | + | chr7_1:62914873-62914892 | None:intergenic | 45.0% | |
| CAAAGCCAGACAATTCAGGT+TGG | + | chr7_1:62915072-62915091 | None:intergenic | 45.0% | |
| CAAAAACCTAGTCTCCCCTT+TGG | + | chr7_1:62915256-62915275 | None:intergenic | 45.0% | |
| ! | CAAAGGGGAGACTAGGTTTT+TGG | - | chr7_1:62915254-62915273 | Msa1029490:intron | 45.0% |
| GTGTGGAGGATCCAAAAGTA+AGG | - | chr7_1:62915287-62915306 | Msa1029490:intron | 45.0% | |
| CGCTGCAACGTAATTCTAAG+AGG | - | chr7_1:62915687-62915706 | Msa1029490:intron | 45.0% | |
| ATGCACATAACACTCAACCG+CGG | + | chr7_1:62915984-62916003 | None:intergenic | 45.0% | |
| CTCAACAGACTCGCTACAAA+TGG | + | chr7_1:62916030-62916049 | None:intergenic | 45.0% | |
| ATTGGCAATGCAGAGAAGCT+AGG | - | chr7_1:62916216-62916235 | Msa1029490:intron | 45.0% | |
| ! | TGCCAATTCGTTTTCCCTGT+TGG | + | chr7_1:62916310-62916329 | None:intergenic | 45.0% |
| !!! | ATAATAAGATAATAATTTTT+CGG | - | chr7_1:62915474-62915493 | Msa1029490:intron | 5.0% |
| ! | GTCGGGTTCGTTTGTTAGGT+TGG | + | chr7_1:62912195-62912214 | None:intergenic | 50.0% |
| AGAGGTCGGGTTCGTTTGTT+AGG | + | chr7_1:62912199-62912218 | None:intergenic | 50.0% | |
| !! | TTATTCGGTTGGTGACTCGG+TGG | + | chr7_1:62912247-62912266 | None:intergenic | 50.0% |
| GAGTTCACGAAGAACGGCTT+TGG | + | chr7_1:62912387-62912406 | None:intergenic | 50.0% | |
| !! | GGCTTACGACGTTGATTCGT+TGG | - | chr7_1:62912531-62912550 | Msa1029490:three_prime_UTR | 50.0% |
| TTCGTTGGACAAATGCGCCA+AGG | - | chr7_1:62912546-62912565 | Msa1029490:three_prime_UTR | 50.0% | |
| AAATGCGCCAAGGTTCTTCC+CGG | - | chr7_1:62912556-62912575 | Msa1029490:three_prime_UTR | 50.0% | |
| ! | AGGAACCATGCTGCGGTTTT+CGG | - | chr7_1:62913015-62913034 | Msa1029490:intron | 50.0% |
| CTTAACCGAAAACCGCAGCA+TGG | + | chr7_1:62913023-62913042 | None:intergenic | 50.0% | |
| ! | TGCTGCGGTTTTCGGTTAAG+AGG | - | chr7_1:62913023-62913042 | Msa1029490:intron | 50.0% |
| ! | TGAGTTGGCAATGACCGTGT+AGG | + | chr7_1:62913815-62913834 | None:intergenic | 50.0% |
| AGGATTCCCACTTCCTCTGT+TGG | - | chr7_1:62914775-62914794 | Msa1029490:CDS | 50.0% | |
| GCAACCCAACCTGAATTGTC+TGG | - | chr7_1:62915064-62915083 | Msa1029490:intron | 50.0% | |
| !! | GTTGGGTTTGCTGATGAACC+AGG | - | chr7_1:62915106-62915125 | Msa1029490:intron | 50.0% |
| TTAGGGGTAAACATGGGTCC+TGG | + | chr7_1:62915127-62915146 | None:intergenic | 50.0% | |
| GTGTTTCCAAAGGGGAGACT+AGG | - | chr7_1:62915247-62915266 | Msa1029490:intron | 50.0% | |
| TTGGGTCTAACTTCGTGTGG+AGG | - | chr7_1:62915273-62915292 | Msa1029490:intron | 50.0% | |
| AAATTTGTCCGGTCCCGACT+TGG | - | chr7_1:62915420-62915439 | Msa1029490:intron | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | - | chr7_1:62915421-62915440 | Msa1029490:intron | 50.0% | |
| GGACTCGCCATCTGATGTTT+AGG | - | chr7_1:62916258-62916277 | Msa1029490:CDS | 50.0% | |
| !! | TTGGTGACTCGGTGGAGAAG+AGG | + | chr7_1:62912239-62912258 | None:intergenic | 55.0% |
| ACATTGGCCCAAGTCGGGAC+CGG | + | chr7_1:62915431-62915450 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 62912190 | 62916716 | 62912190 | ID=Msa1029490;Name=Msa1029490 |
| chr7_1 | mRNA | 62912190 | 62916716 | 62912190 | ID=Msa1029490-mRNA-1;Parent=Msa1029490;Name=Msa1029490-mRNA-1;_AED=0.07;_eAED=0.07;_QI=124|1|1|1|0.71|0.62|8|454|228 |
| chr7_1 | exon | 62912190 | 62912397 | 62912190 | ID=Msa1029490-mRNA-1:exon:13586;Parent=Msa1029490-mRNA-1 |
| chr7_1 | exon | 62912477 | 62912677 | 62912477 | ID=Msa1029490-mRNA-1:exon:13585;Parent=Msa1029490-mRNA-1 |
| chr7_1 | exon | 62914444 | 62914618 | 62914444 | ID=Msa1029490-mRNA-1:exon:13584;Parent=Msa1029490-mRNA-1 |
| chr7_1 | exon | 62914707 | 62914811 | 62914707 | ID=Msa1029490-mRNA-1:exon:13583;Parent=Msa1029490-mRNA-1 |
| chr7_1 | exon | 62915862 | 62915941 | 62915862 | ID=Msa1029490-mRNA-1:exon:13582;Parent=Msa1029490-mRNA-1 |
| chr7_1 | exon | 62916051 | 62916160 | 62916051 | ID=Msa1029490-mRNA-1:exon:13581;Parent=Msa1029490-mRNA-1 |
| chr7_1 | exon | 62916254 | 62916405 | 62916254 | ID=Msa1029490-mRNA-1:exon:13580;Parent=Msa1029490-mRNA-1 |
| chr7_1 | exon | 62916483 | 62916716 | 62916483 | ID=Msa1029490-mRNA-1:exon:13579;Parent=Msa1029490-mRNA-1 |
| chr7_1 | five_prime_UTR | 62916593 | 62916716 | 62916593 | ID=Msa1029490-mRNA-1:five_prime_utr;Parent=Msa1029490-mRNA-1 |
| chr7_1 | CDS | 62916483 | 62916592 | 62916483 | ID=Msa1029490-mRNA-1:cds;Parent=Msa1029490-mRNA-1 |
| chr7_1 | CDS | 62916254 | 62916405 | 62916254 | ID=Msa1029490-mRNA-1:cds;Parent=Msa1029490-mRNA-1 |
| chr7_1 | CDS | 62916051 | 62916160 | 62916051 | ID=Msa1029490-mRNA-1:cds;Parent=Msa1029490-mRNA-1 |
| chr7_1 | CDS | 62915862 | 62915941 | 62915862 | ID=Msa1029490-mRNA-1:cds;Parent=Msa1029490-mRNA-1 |
| chr7_1 | CDS | 62914707 | 62914811 | 62914707 | ID=Msa1029490-mRNA-1:cds;Parent=Msa1029490-mRNA-1 |
| chr7_1 | CDS | 62914489 | 62914618 | 62914489 | ID=Msa1029490-mRNA-1:cds;Parent=Msa1029490-mRNA-1 |
| chr7_1 | three_prime_UTR | 62914444 | 62914488 | 62914444 | ID=Msa1029490-mRNA-1:three_prime_utr;Parent=Msa1029490-mRNA-1 |
| chr7_1 | three_prime_UTR | 62912477 | 62912677 | 62912477 | ID=Msa1029490-mRNA-1:three_prime_utr;Parent=Msa1029490-mRNA-1 |
| chr7_1 | three_prime_UTR | 62912190 | 62912397 | 62912190 | ID=Msa1029490-mRNA-1:three_prime_utr;Parent=Msa1029490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
