Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156840 | XP_013447912.1 | 99.743 | 389 | 1 | 0 | 1 | 389 | 1 | 389 | 0.0 | 807 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156840 | sp|Q9LSD6|ARP2_ARATH | 93.059 | 389 | 27 | 0 | 1 | 389 | 1 | 389 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156840 | A0A072TWS4 | 99.743 | 389 | 1 | 0 | 1 | 389 | 1 | 389 | 0.0 | 807 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0521320 | Msa1156840 | 0.809192 | 2.136289e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156840 | MtrunA17_Chr7g0224401 | 99.743 | 389 | 1 | 0 | 1 | 389 | 1 | 389 | 0.0 | 807 |
| Msa1156840 | MtrunA17_Chr2g0278591 | 43.536 | 379 | 200 | 3 | 7 | 385 | 10 | 374 | 2.37e-121 | 356 |
| Msa1156840 | MtrunA17_Chr3g0129641 | 43.799 | 379 | 199 | 3 | 7 | 385 | 10 | 374 | 4.27e-121 | 355 |
| Msa1156840 | MtrunA17_Chr7g0258721 | 43.799 | 379 | 199 | 3 | 7 | 385 | 10 | 374 | 2.11e-120 | 353 |
| Msa1156840 | MtrunA17_Chr7g0223901 | 43.272 | 379 | 201 | 3 | 7 | 385 | 10 | 374 | 3.06e-120 | 353 |
| Msa1156840 | MtrunA17_Chr6g0448881 | 42.744 | 379 | 203 | 3 | 7 | 385 | 10 | 374 | 4.63e-120 | 353 |
| Msa1156840 | MtrunA17_Chr1g0175391 | 43.272 | 379 | 201 | 3 | 7 | 385 | 10 | 374 | 8.24e-120 | 352 |
| Msa1156840 | MtrunA17_Chr2g0328091 | 42.480 | 379 | 204 | 3 | 7 | 385 | 10 | 374 | 1.49e-118 | 349 |
| Msa1156840 | MtrunA17_Chr8g0381261 | 32.048 | 415 | 242 | 11 | 3 | 381 | 6 | 416 | 5.38e-60 | 200 |
| Msa1156840 | MtrunA17_Chr8g0361001 | 28.062 | 449 | 246 | 8 | 2 | 385 | 5 | 441 | 8.27e-53 | 181 |
| Msa1156840 | MtrunA17_Chr5g0427591 | 28.062 | 449 | 246 | 8 | 2 | 385 | 5 | 441 | 2.28e-52 | 180 |
| Msa1156840 | MtrunA17_Chr3g0089031 | 28.608 | 388 | 239 | 10 | 6 | 385 | 3 | 360 | 6.66e-42 | 150 |
| Msa1156840 | MtrunA17_Chr2g0305361 | 26.000 | 450 | 246 | 12 | 3 | 386 | 4 | 432 | 2.00e-38 | 143 |
| Msa1156840 | MtrunA17_Chr3g0080021 | 27.027 | 296 | 176 | 11 | 92 | 369 | 181 | 454 | 1.36e-22 | 99.0 |
| Msa1156840 | MtrunA17_Chr8g0369101 | 27.832 | 309 | 176 | 14 | 92 | 379 | 189 | 471 | 1.74e-21 | 95.9 |
| Msa1156840 | MtrunA17_Chr3g0111971 | 29.231 | 260 | 161 | 7 | 1 | 244 | 16 | 268 | 3.94e-19 | 89.4 |
| Msa1156840 | MtrunA17_Chr8g0336071 | 39.175 | 97 | 59 | 0 | 104 | 200 | 1 | 97 | 1.49e-15 | 72.0 |
| Msa1156840 | MtrunA17_Chr8g0336061 | 34.694 | 98 | 51 | 1 | 234 | 318 | 6 | 103 | 3.09e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156840 | AT3G27000.1 | 93.059 | 389 | 27 | 0 | 1 | 389 | 1 | 389 | 0.0 | 761 |
| Msa1156840 | AT2G42100.1 | 44.531 | 384 | 199 | 3 | 2 | 385 | 6 | 375 | 5.71e-123 | 360 |
| Msa1156840 | AT3G53750.1 | 44.063 | 379 | 198 | 3 | 7 | 385 | 10 | 374 | 3.69e-121 | 356 |
| Msa1156840 | AT3G53750.2 | 44.063 | 379 | 198 | 3 | 7 | 385 | 10 | 374 | 3.69e-121 | 356 |
| Msa1156840 | AT2G37620.1 | 44.063 | 379 | 198 | 3 | 7 | 385 | 10 | 374 | 3.69e-121 | 356 |
| Msa1156840 | AT2G37620.3 | 44.063 | 379 | 198 | 3 | 7 | 385 | 10 | 374 | 3.69e-121 | 356 |
| Msa1156840 | AT2G37620.2 | 44.063 | 379 | 198 | 3 | 7 | 385 | 10 | 374 | 3.69e-121 | 356 |
| Msa1156840 | AT2G37620.4 | 44.063 | 379 | 198 | 3 | 7 | 385 | 10 | 374 | 3.69e-121 | 356 |
| Msa1156840 | AT5G09810.1 | 44.063 | 379 | 198 | 3 | 7 | 385 | 10 | 374 | 3.90e-121 | 356 |
| Msa1156840 | AT3G12110.1 | 43.536 | 379 | 200 | 3 | 7 | 385 | 10 | 374 | 1.89e-120 | 354 |
| Msa1156840 | AT1G49240.1 | 42.969 | 384 | 205 | 3 | 2 | 385 | 5 | 374 | 1.44e-119 | 352 |
| Msa1156840 | AT3G18780.2 | 42.969 | 384 | 205 | 3 | 2 | 385 | 5 | 374 | 1.58e-119 | 352 |
| Msa1156840 | AT3G18780.3 | 42.969 | 384 | 205 | 3 | 2 | 385 | 5 | 374 | 1.58e-119 | 352 |
| Msa1156840 | AT3G46520.2 | 42.744 | 379 | 203 | 3 | 7 | 385 | 10 | 374 | 9.15e-117 | 345 |
| Msa1156840 | AT3G46520.1 | 42.744 | 379 | 203 | 3 | 7 | 385 | 10 | 374 | 9.15e-117 | 345 |
| Msa1156840 | AT3G18780.1 | 44.167 | 360 | 188 | 2 | 2 | 361 | 5 | 351 | 1.38e-116 | 344 |
| Msa1156840 | AT5G59370.2 | 42.480 | 379 | 204 | 3 | 7 | 385 | 10 | 374 | 3.13e-116 | 343 |
| Msa1156840 | AT5G59370.1 | 42.480 | 379 | 204 | 3 | 7 | 385 | 10 | 374 | 3.13e-116 | 343 |
| Msa1156840 | AT2G42090.1 | 38.259 | 379 | 215 | 4 | 7 | 385 | 4 | 363 | 9.08e-97 | 293 |
| Msa1156840 | AT2G42170.1 | 40.179 | 336 | 185 | 4 | 52 | 386 | 8 | 328 | 9.59e-93 | 281 |
| Msa1156840 | AT2G42170.3 | 40.179 | 336 | 185 | 4 | 52 | 386 | 8 | 328 | 9.59e-93 | 281 |
| Msa1156840 | AT2G42170.4 | 41.290 | 310 | 168 | 2 | 52 | 361 | 8 | 303 | 1.48e-89 | 273 |
| Msa1156840 | AT2G42170.2 | 41.290 | 310 | 168 | 2 | 52 | 361 | 8 | 303 | 1.48e-89 | 273 |
| Msa1156840 | AT1G13180.1 | 31.325 | 415 | 245 | 11 | 3 | 381 | 5 | 415 | 1.04e-60 | 202 |
| Msa1156840 | AT2G42170.5 | 39.167 | 240 | 130 | 4 | 148 | 386 | 6 | 230 | 7.23e-57 | 186 |
| Msa1156840 | AT1G18450.1 | 27.974 | 454 | 237 | 10 | 2 | 385 | 5 | 438 | 1.31e-55 | 189 |
| Msa1156840 | AT3G33520.1 | 27.928 | 444 | 229 | 12 | 4 | 386 | 2 | 415 | 4.56e-41 | 150 |
| Msa1156840 | AT3G60830.1 | 28.793 | 323 | 203 | 6 | 71 | 385 | 57 | 360 | 4.64e-39 | 143 |
| Msa1156840 | AT3G12380.2 | 30.085 | 236 | 152 | 4 | 7 | 230 | 22 | 256 | 6.84e-23 | 101 |
| Msa1156840 | AT3G12380.1 | 30.380 | 237 | 144 | 6 | 7 | 230 | 22 | 250 | 3.37e-22 | 99.4 |
| Msa1156840 | AT1G73910.1 | 35.507 | 138 | 75 | 2 | 2 | 125 | 5 | 142 | 2.29e-19 | 84.3 |
| Msa1156840 | AT1G73910.2 | 35.507 | 138 | 75 | 2 | 2 | 125 | 5 | 142 | 2.29e-19 | 84.3 |
| Msa1156840 | AT5G56180.3 | 27.823 | 248 | 146 | 8 | 138 | 375 | 107 | 331 | 5.44e-18 | 84.7 |
| Msa1156840 | AT5G56180.1 | 25.620 | 242 | 159 | 5 | 138 | 375 | 239 | 463 | 6.71e-18 | 85.5 |
Find 112 sgRNAs with CRISPR-Local
Find 571 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGGAAGGGTTATTAAAT+TGG | 0.213789 | 7_4:+45412067 | Msa1156840:CDS |
| GTTGGCAATATCCAAGTTAA+TGG | 0.236864 | 7_4:+45416821 | Msa1156840:intron |
| CACAGGATGCACCAGAGTTT+TGG | 0.248455 | 7_4:+45416415 | Msa1156840:intron |
| ATCTTGTTGATTTGCTTTCT+AGG | 0.255963 | 7_4:+45410972 | Msa1156840:CDS |
| CTTGGTGGTGCTGTCCTTGC+AGG | 0.268816 | 7_4:+45416069 | Msa1156840:CDS |
| CAAGCACGGTTGGGTTGGTG+GGG | 0.314947 | 7_4:-45408461 | None:intergenic |
| AAGAGAAACTGTGCTATATA+AGG | 0.319977 | 7_4:+45411150 | Msa1156840:CDS |
| ACAATGGAATCGTTCAAAAC+TGG | 0.336694 | 7_4:+45409297 | Msa1156840:CDS |
| ACCGGGGTGAAAAGAGCTTC+AGG | 0.346077 | 7_4:-45412110 | None:intergenic |
| AGAAATACATGATCGTTATC+TGG | 0.351629 | 7_4:+45415323 | Msa1156840:CDS |
| GTTGTCTCAGGTTTGCTGAC+TGG | 0.353911 | 7_4:+45410005 | Msa1156840:intron |
| ATTTCGCTGCATTCAAGAAA+TGG | 0.364748 | 7_4:+45412389 | Msa1156840:CDS |
| ATCCAGGTTCCAGTTGTTGA+TGG | 0.378370 | 7_4:+45410890 | Msa1156840:intron |
| TTCAGGGGCCTGGAACCTTT+CGG | 0.378452 | 7_4:-45412093 | None:intergenic |
| AAGCACGGTTGGGTTGGTGG+GGG | 0.380747 | 7_4:-45408460 | None:intergenic |
| ATTGGGCACCGAAAGGTTCC+AGG | 0.383605 | 7_4:+45412085 | Msa1156840:CDS |
| CTACCGATCGCAGCACAAAA+TGG | 0.387028 | 7_4:+45408519 | Msa1156840:exon |
| GATGGAAGGGTTATTAAATT+GGG | 0.395733 | 7_4:+45412068 | Msa1156840:CDS |
| TGAAAAGAGCTTCAGGGGCC+TGG | 0.400209 | 7_4:-45412103 | None:intergenic |
| GTCGTTTGCGACAACGGAAC+TGG | 0.405974 | 7_4:+45408556 | Msa1156840:CDS |
| CGATTCTTTGAGGGGTTAAG+AGG | 0.411352 | 7_4:-45409483 | None:intergenic |
| AGAAAGCAAATCAACAAGAT+AGG | 0.417134 | 7_4:-45410969 | None:intergenic |
| AAGGAATTGCTTGCCTTAGT+AGG | 0.427964 | 7_4:+45416463 | Msa1156840:CDS |
| CAGGAACTTATAGATGTTGA+AGG | 0.428581 | 7_4:+45412345 | Msa1156840:intron |
| CCCACCAACCCAACCGTGCT+TGG | 0.430852 | 7_4:+45408462 | Msa1156840:five_prime_UTR |
| TGTTTAATGCAAGCTGTTGA+AGG | 0.434297 | 7_4:-45416608 | None:intergenic |
| ACCAAGCACGGTTGGGTTGG+TGG | 0.436509 | 7_4:-45408463 | None:intergenic |
| GCTGCGATCGGTAGAAGTTC+CGG | 0.437643 | 7_4:-45408510 | None:intergenic |
| AATGAATAGCCATCAACAAC+TGG | 0.452353 | 7_4:-45410899 | None:intergenic |
| AATTTAATAACCCTTCCATC+TGG | 0.458056 | 7_4:-45412065 | None:intergenic |
| AACGTCGTCGTTTGCGACAA+CGG | 0.458806 | 7_4:+45408550 | Msa1156840:CDS |
| TACAAGAGGGAATATCAGTT+GGG | 0.462095 | 7_4:+45411259 | Msa1156840:CDS |
| AGCACGGTTGGGTTGGTGGG+GGG | 0.464305 | 7_4:-45408459 | None:intergenic |
| TGTTGATTTGCTTTCTAGGA+GGG | 0.465135 | 7_4:+45410976 | Msa1156840:CDS |
| CCAAGCACGGTTGGGTTGGT+GGG | 0.466721 | 7_4:-45408462 | None:intergenic |
| GTAGAATCTTACAGTCTTGA+GGG | 0.475224 | 7_4:-45409449 | None:intergenic |
| AATTACCGGCTTGGTAATCC+AGG | 0.478482 | 7_4:-45414301 | None:intergenic |
| GGAGGGAGCACCATGTATCC+TGG | 0.478525 | 7_4:+45414283 | Msa1156840:CDS |
| TTGATTTGCTTTCTAGGAGG+GGG | 0.478917 | 7_4:+45410978 | Msa1156840:CDS |
| CAATGGAATCGTTCAAAACT+GGG | 0.480589 | 7_4:+45409298 | Msa1156840:CDS |
| AGGCTTGGCCACACCTACTA+AGG | 0.481449 | 7_4:-45416476 | None:intergenic |
| CTTATAGATGTTGAAGGTGA+TGG | 0.483087 | 7_4:+45412351 | Msa1156840:CDS |
| GAAATTACGATTGAGAATTG+AGG | 0.487542 | 7_4:+45416017 | Msa1156840:intron |
| GAAATAAACAATTACCGGCT+TGG | 0.489984 | 7_4:-45414310 | None:intergenic |
| CATATAATGTTAGAACAGCT+TGG | 0.499158 | 7_4:-45409647 | None:intergenic |
| TAAATCAGCTTCCAGATGGA+AGG | 0.503074 | 7_4:+45412054 | Msa1156840:intron |
| TTCATTCGTTTCGTCAGATG+AGG | 0.509876 | 7_4:-45410923 | None:intergenic |
| AAGAAATGGATATTGACAAC+CGG | 0.510185 | 7_4:+45412403 | Msa1156840:CDS |
| GTTGATTTGCTTTCTAGGAG+GGG | 0.511197 | 7_4:+45410977 | Msa1156840:CDS |
| TGAACGATTCCATTGTTCAC+AGG | 0.516894 | 7_4:-45409290 | None:intergenic |
| TTCTTTGAGGGGTTAAGAGG+TGG | 0.517788 | 7_4:-45409480 | None:intergenic |
| TAGGATATTGTTGTTGGCGA+AGG | 0.522697 | 7_4:+45409230 | Msa1156840:intron |
| GGGCAACAAAGATGGATTGA+AGG | 0.522946 | 7_4:+45415359 | Msa1156840:CDS |
| CTAAAGCACCAAGCACGGTT+GGG | 0.532264 | 7_4:-45408470 | None:intergenic |
| AGTAGAATCTTACAGTCTTG+AGG | 0.534001 | 7_4:-45409450 | None:intergenic |
| GCTTACCGAGCAAGAGCTAA+AGG | 0.534358 | 7_4:+45408843 | Msa1156840:CDS |
| ACGAAACGAATGAATGTAGC+TGG | 0.537045 | 7_4:+45410932 | Msa1156840:CDS |
| GCATACCTTTAGCTCTTGCT+CGG | 0.537564 | 7_4:-45408848 | None:intergenic |
| TTACTGGAACTCAATAAGTC+AGG | 0.538236 | 7_4:-45416496 | None:intergenic |
| GGATATTGACAACCGGATGA+TGG | 0.543048 | 7_4:+45412410 | Msa1156840:CDS |
| AGGGAAGATTATCTAGAAGA+AGG | 0.543390 | 7_4:+45416444 | Msa1156840:CDS |
| AGCACCAAGCACGGTTGGGT+TGG | 0.544705 | 7_4:-45408466 | None:intergenic |
| ACTAAAGCACCAAGCACGGT+TGG | 0.544816 | 7_4:-45408471 | None:intergenic |
| CCGGGGTGAAAAGAGCTTCA+GGG | 0.548109 | 7_4:-45412109 | None:intergenic |
| TGGAGCATCATACCATCATC+CGG | 0.548244 | 7_4:-45412422 | None:intergenic |
| TTGTTGATTTGCTTTCTAGG+AGG | 0.550696 | 7_4:+45410975 | Msa1156840:CDS |
| CTACAAGAGGGAATATCAGT+TGG | 0.554095 | 7_4:+45411258 | Msa1156840:CDS |
| GATTCTTCGTAACGAAGCAT+TGG | 0.554756 | 7_4:-45408820 | None:intergenic |
| TGTCCTTGCAGGAATAATGA+AGG | 0.554832 | 7_4:+45416080 | Msa1156840:CDS |
| CCTGCAGTTATGACTACAAG+AGG | 0.554959 | 7_4:+45411245 | Msa1156840:intron |
| TTCATTCAGTATGTGAAGTG+TGG | 0.555221 | 7_4:+45408745 | Msa1156840:intron |
| TTTCTAAATCAGCTTCCAGA+TGG | 0.559938 | 7_4:+45412050 | Msa1156840:intron |
| GGAACTCAATAAGTCAGGCT+TGG | 0.562305 | 7_4:-45416491 | None:intergenic |
| GCTTGGTAATCCAGGATACA+TGG | 0.565351 | 7_4:-45414293 | None:intergenic |
| GACTGGATTAGTTATAGACT+CGG | 0.570643 | 7_4:+45410022 | Msa1156840:CDS |
| ATATATCAAGCTGATGCCGC+AGG | 0.572538 | 7_4:-45409262 | None:intergenic |
| ATATCTTATCCTGTGAACAA+TGG | 0.575935 | 7_4:+45409281 | Msa1156840:CDS |
| AAATCAGCTTCCAGATGGAA+GGG | 0.581088 | 7_4:+45412055 | Msa1156840:intron |
| AACTAGCCTTCAGCTATACA+AGG | 0.581548 | 7_4:-45416638 | None:intergenic |
| TTATTAAATTGGGCACCGAA+AGG | 0.586120 | 7_4:+45412078 | Msa1156840:CDS |
| ATTGCTTGCCTTAGTAGGTG+TGG | 0.594338 | 7_4:+45416468 | Msa1156840:CDS |
| TCATTCGTTTCGTCAGATGA+GGG | 0.594664 | 7_4:-45410922 | None:intergenic |
| AAGCACATGGTGTACCTTGG+TGG | 0.596306 | 7_4:+45416054 | Msa1156840:CDS |
| TGTATCCTGGATTACCAAGC+CGG | 0.598645 | 7_4:+45414296 | Msa1156840:CDS |
| ATTGGCCTCCCCACCACACA+AGG | 0.599527 | 7_4:-45408802 | None:intergenic |
| TCCCTGTTAATCCAAAACTC+TGG | 0.600563 | 7_4:-45416426 | None:intergenic |
| TTAGTTATAGACTCGGGTGA+TGG | 0.601377 | 7_4:+45410029 | Msa1156840:CDS |
| AGGAAGCACATGGTGTACCT+TGG | 0.601683 | 7_4:+45416051 | Msa1156840:CDS |
| AAACCTTCATTATTCCTGCA+AGG | 0.603234 | 7_4:-45416083 | None:intergenic |
| TGTGAACAAAATCACATCAG+AGG | 0.607465 | 7_4:+45416544 | Msa1156840:three_prime_UTR |
| GTTCTAACATTATATGCCCA+AGG | 0.610362 | 7_4:+45409654 | Msa1156840:CDS |
| CGGGGTGAAAAGAGCTTCAG+GGG | 0.613959 | 7_4:-45412108 | None:intergenic |
| ATAGTTCTTAACAAGGATTG+TGG | 0.618919 | 7_4:-45411290 | None:intergenic |
| AGATGTTGAAGGTGATGGAA+TGG | 0.620079 | 7_4:+45412356 | Msa1156840:CDS |
| GGATGACATGTGTCATGTGT+GGG | 0.624936 | 7_4:+45409319 | Msa1156840:CDS |
| TGTTAGCCTTGTATAGCTGA+AGG | 0.628363 | 7_4:+45416632 | Msa1156840:three_prime_UTR |
| AGGTGATGGAATGGCTGACA+TGG | 0.632586 | 7_4:+45412365 | Msa1156840:CDS |
| ACGTACTAAAGCACCAAGCA+CGG | 0.633044 | 7_4:-45408475 | None:intergenic |
| ACCATGTGCTTCCTGCGTGG+TGG | 0.639507 | 7_4:-45416042 | None:intergenic |
| AGTACGTCATACATCTCCGC+CGG | 0.640678 | 7_4:+45408491 | Msa1156840:five_prime_UTR |
| TTACAGTATAGTTCTTAACA+AGG | 0.644900 | 7_4:-45411297 | None:intergenic |
| CAAGATAGGAAGTTATGTGT+CGG | 0.647798 | 7_4:-45410955 | None:intergenic |
| TCCACCACGCAGGAAGCACA+TGG | 0.651400 | 7_4:+45416041 | Msa1156840:CDS |
| CTGCAGTTATGACTACAAGA+GGG | 0.658607 | 7_4:+45411246 | Msa1156840:intron |
| ACTGGATTAGTTATAGACTC+GGG | 0.665485 | 7_4:+45410023 | Msa1156840:CDS |
| ACAAGAGGGAATATCAGTTG+GGG | 0.674160 | 7_4:+45411260 | Msa1156840:CDS |
| GGGATGACATGTGTCATGTG+TGG | 0.678733 | 7_4:+45409318 | Msa1156840:CDS |
| GAATTGAGGATCCACCACGC+AGG | 0.686524 | 7_4:+45416031 | Msa1156840:CDS |
| GGGTGATGGTGTTACTCATG+TGG | 0.687822 | 7_4:+45410043 | Msa1156840:CDS |
| TACACCATGTGCTTCCTGCG+TGG | 0.691678 | 7_4:-45416045 | None:intergenic |
| CTGCAAGGACAGCACCACCA+AGG | 0.695691 | 7_4:-45416068 | None:intergenic |
| GCGATCGGTAGAAGTTCCGG+CGG | 0.706875 | 7_4:-45408507 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATTTTATTTTTTA+TGG | + | chr7_4:45412243-45412262 | Msa1156840:intron | 0.0% |
| !! | ATTTAATTATTTATAAACCT+TGG | + | chr7_4:45409802-45409821 | Msa1156840:intron | 10.0% |
| !!! | TATTATTTAAAGTATACATT+CGG | + | chr7_4:45410836-45410855 | Msa1156840:intron | 10.0% |
| !! | AAAAAAAACTTATATTTGTA+GGG | - | chr7_4:45411660-45411679 | None:intergenic | 10.0% |
| !! | AAAAAAAAACTTATATTTGT+AGG | - | chr7_4:45411661-45411680 | None:intergenic | 10.0% |
| !! | ATTATAGTATATAATGATAA+TGG | + | chr7_4:45412196-45412215 | Msa1156840:intron | 10.0% |
| !! | AATTATATAATATACAGTAA+GGG | - | chr7_4:45415898-45415917 | None:intergenic | 10.0% |
| !!! | AATAATATTTAAAGCAACTA+AGG | - | chr7_4:45409554-45409573 | None:intergenic | 15.0% |
| !! | CTAACTAATTATTAACATAT+AGG | + | chr7_4:45409778-45409797 | Msa1156840:intron | 15.0% |
| !!! | AAATGATTATTGATTTTAGT+TGG | + | chr7_4:45411367-45411386 | Msa1156840:intron | 15.0% |
| !!! | TACTATCATTTTTATTGTTA+TGG | + | chr7_4:45411533-45411552 | Msa1156840:intron | 15.0% |
| !! | ATTGAAAATCAAATATTACA+GGG | - | chr7_4:45411703-45411722 | None:intergenic | 15.0% |
| !! | AATTGAAAATCAAATATTAC+AGG | - | chr7_4:45411704-45411723 | None:intergenic | 15.0% |
| !!! | TATTTTTTCTACAATTACAA+TGG | - | chr7_4:45412273-45412292 | None:intergenic | 15.0% |
| !!! | AATAGTTTTCAAGTAAATTA+TGG | - | chr7_4:45412504-45412523 | None:intergenic | 15.0% |
| !!! | TCTAAGTTTTTTTTTTTGTA+AGG | - | chr7_4:45413285-45413304 | None:intergenic | 15.0% |
| !! | TCAAATATATGCATATAAAA+TGG | - | chr7_4:45414064-45414083 | None:intergenic | 15.0% |
| !!! | TATGAATTTTGTATAATCAT+AGG | + | chr7_4:45414088-45414107 | Msa1156840:intron | 15.0% |
| !! | ACTTAATAAACAATTTATGA+CGG | + | chr7_4:45415160-45415179 | Msa1156840:intron | 15.0% |
| !! | AAGTTTATTGATGAATTATT+TGG | + | chr7_4:45415466-45415485 | Msa1156840:intron | 15.0% |
| !! | CAATTATATAATATACAGTA+AGG | - | chr7_4:45415899-45415918 | None:intergenic | 15.0% |
| !! | AAGAAAAATGTTAAGTTAAA+AGG | - | chr7_4:45415983-45416002 | None:intergenic | 15.0% |
| !!! | ATTTATTTTATTTTACGCAA+AGG | + | chr7_4:45416124-45416143 | Msa1156840:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr7_4:45416993-45417012 | None:intergenic | 15.0% |
| !!! | AAATTATCCTTTTTAACTAT+TGG | - | chr7_4:45417017-45417036 | None:intergenic | 15.0% |
| !! | AATAGTTAAAAAGGATAATT+TGG | + | chr7_4:45417016-45417035 | Msa1156840:intron | 15.0% |
| !! | AAAATCAAACTACATTTCAA+CGG | + | chr7_4:45408619-45408638 | Msa1156840:intron | 20.0% |
| !! | TAATTATGATAACTAGACTT+GGG | - | chr7_4:45409115-45409134 | None:intergenic | 20.0% |
| !! | ATAATTATGATAACTAGACT+TGG | - | chr7_4:45409116-45409135 | None:intergenic | 20.0% |
| !! | AATACATTATGAAATATCCA+AGG | - | chr7_4:45409822-45409841 | None:intergenic | 20.0% |
| !!! | TTTATTTTATACACCATATG+TGG | + | chr7_4:45409847-45409866 | Msa1156840:intron | 20.0% |
| !!! | TGTTCATAACTTCATTTTTA+TGG | + | chr7_4:45410523-45410542 | Msa1156840:intron | 20.0% |
| !! | GTATAATAAAATATCCTTCA+TGG | + | chr7_4:45410621-45410640 | Msa1156840:intron | 20.0% |
| !! | ACAAATCTCAATTCAAATAT+TGG | + | chr7_4:45411179-45411198 | Msa1156840:intron | 20.0% |
| !! | ATTGTAAAATGAATATTGCA+TGG | + | chr7_4:45411728-45411747 | Msa1156840:intron | 20.0% |
| !! | TGGAAAAAGAAATTTATTAG+AGG | + | chr7_4:45411758-45411777 | Msa1156840:intron | 20.0% |
| !! | GGAAAAAGAAATTTATTAGA+GGG | + | chr7_4:45411759-45411778 | Msa1156840:intron | 20.0% |
| !!! | AAAGACACTTTTTAAACTTT+AGG | + | chr7_4:45411840-45411859 | Msa1156840:intron | 20.0% |
| !!! | AAGACACTTTTTAAACTTTA+GGG | + | chr7_4:45411841-45411860 | Msa1156840:intron | 20.0% |
| !! | AACAACAACAACAATAATAA+TGG | - | chr7_4:45411901-45411920 | None:intergenic | 20.0% |
| !! | TCAAAAAAAAAAAACACCTA+TGG | - | chr7_4:45411941-45411960 | None:intergenic | 20.0% |
| !!! | AGGTGTTTTTTTTTTTTGAA+TGG | + | chr7_4:45411942-45411961 | Msa1156840:intron | 20.0% |
| !!! | ATATAGCATGTATAATTTTC+TGG | + | chr7_4:45412290-45412309 | Msa1156840:intron | 20.0% |
| !! | CGAAGTATATAGATTTAAAA+TGG | - | chr7_4:45412445-45412464 | None:intergenic | 20.0% |
| !! | TATAAATACAACAACTAACA+CGG | - | chr7_4:45412582-45412601 | None:intergenic | 20.0% |
| !!! | AAATTGGATTTTTCTAAAAC+TGG | + | chr7_4:45412806-45412825 | Msa1156840:intron | 20.0% |
| !! | AAAAATTATAGCGATAATCA+TGG | + | chr7_4:45413334-45413353 | Msa1156840:intron | 20.0% |
| !! | TAATATTGAAGCTAAAATCA+TGG | + | chr7_4:45413405-45413424 | Msa1156840:intron | 20.0% |
| !! | TAATTCAAAATGGAATAAAC+CGG | - | chr7_4:45413520-45413539 | None:intergenic | 20.0% |
| !!! | TGCATTGTTTTAATTCAAAA+TGG | - | chr7_4:45413530-45413549 | None:intergenic | 20.0% |
| !!! | AGTTTTTCTTAAAATGGTTT+TGG | + | chr7_4:45413554-45413573 | Msa1156840:intron | 20.0% |
| !! | ATACATGATTTCACTAATTT+AGG | - | chr7_4:45413800-45413819 | None:intergenic | 20.0% |
| !! | GAATTAAAATATCATAACCA+TGG | - | chr7_4:45414467-45414486 | None:intergenic | 20.0% |
| !! | TTGAAATGGATAGTATAAAA+TGG | - | chr7_4:45414576-45414595 | None:intergenic | 20.0% |
| !!! | ATTTTGTCCAAAGAAAAATA+TGG | - | chr7_4:45414797-45414816 | None:intergenic | 20.0% |
| !!! | ATATTTTTCTTTGGACAAAA+TGG | + | chr7_4:45414796-45414815 | Msa1156840:intron | 20.0% |
| !! | ATTATCCTTCATTATTTGTA+TGG | + | chr7_4:45415042-45415061 | Msa1156840:intron | 20.0% |
| !! | TTATCCTTCATTATTTGTAT+GGG | + | chr7_4:45415043-45415062 | Msa1156840:intron | 20.0% |
| !! | GAAAGAGAAATTAAAAGAAT+TGG | + | chr7_4:45415065-45415084 | Msa1156840:intron | 20.0% |
| !! | AAAGAGAAATAAATAGCAAA+GGG | + | chr7_4:45415094-45415113 | Msa1156840:intron | 20.0% |
| !! | GAAAATAAACAATGTTTCAT+TGG | + | chr7_4:45415125-45415144 | Msa1156840:intron | 20.0% |
| !!! | ATATTTTTATCTGTTGAACA+TGG | + | chr7_4:45415202-45415221 | Msa1156840:intron | 20.0% |
| !!! | TGTTACGTAAATTCTTTTAA+TGG | - | chr7_4:45415441-45415460 | None:intergenic | 20.0% |
| !!! | CAGTTTCAATTATTTTCATT+CGG | - | chr7_4:45415586-45415605 | None:intergenic | 20.0% |
| !!! | AGGAGTTATTGTTATTATTT+GGG | - | chr7_4:45415667-45415686 | None:intergenic | 20.0% |
| !!! | AAGGAGTTATTGTTATTATT+TGG | - | chr7_4:45415668-45415687 | None:intergenic | 20.0% |
| !! | ACAATATCAATAATAGACAT+AGG | - | chr7_4:45415816-45415835 | None:intergenic | 20.0% |
| !!! | CTTAACATTTTTCTTGTTAT+TGG | + | chr7_4:45415988-45416007 | Msa1156840:intron | 20.0% |
| !! | TATTATGTAATCCATTAACT+TGG | - | chr7_4:45416835-45416854 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr7_4:45416930-45416949 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAAAA+AGG | + | chr7_4:45417007-45417026 | Msa1156840:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr7_4:45417050-45417069 | None:intergenic | 20.0% |
| !! | AGTTAATGCTAATTTGAGAT+TGG | - | chr7_4:45408658-45408677 | None:intergenic | 25.0% |
| !! | TCTAAAGTGTGGATTAATAT+GGG | - | chr7_4:45408960-45408979 | None:intergenic | 25.0% |
| !!! | TTCTAAAGTGTGGATTAATA+TGG | - | chr7_4:45408961-45408980 | None:intergenic | 25.0% |
| !! | TTGAAGTTATGTTCCATTTT+AGG | + | chr7_4:45409211-45409230 | Msa1156840:intron | 25.0% |
| !!! | ATTTTTTCACGATTCTTTGA+GGG | - | chr7_4:45409495-45409514 | None:intergenic | 25.0% |
| ! | ATATATGATGTATCCACATA+TGG | - | chr7_4:45409863-45409882 | None:intergenic | 25.0% |
| ! | ATTTCAAAGCATAGCAAATT+AGG | - | chr7_4:45409886-45409905 | None:intergenic | 25.0% |
| !!! | AATTTGCTATGCTTTGAAAT+AGG | + | chr7_4:45409886-45409905 | Msa1156840:intron | 25.0% |
| ! | TCTACGTTTCGTTTATTATT+AGG | + | chr7_4:45409914-45409933 | Msa1156840:intron | 25.0% |
| !! | TTTACAAATTTATGCCCTTT+TGG | + | chr7_4:45410166-45410185 | Msa1156840:intron | 25.0% |
| ! | AATCTTAAGAAATACTGACA+TGG | + | chr7_4:45410279-45410298 | Msa1156840:intron | 25.0% |
| !! | TGCTTTAAGCAAAATTGAAA+TGG | + | chr7_4:45410648-45410667 | Msa1156840:intron | 25.0% |
| !!! | AATGTTGATAATGCAAGTTT+TGG | + | chr7_4:45410861-45410880 | Msa1156840:intron | 25.0% |
| ! | TTAGAGTTGAAGCATAAAAA+GGG | - | chr7_4:45411058-45411077 | None:intergenic | 25.0% |
| !! | TTTTTATGCTTCAACTCTAA+CGG | + | chr7_4:45411058-45411077 | Msa1156840:intron | 25.0% |
| !!! | ATTCAAATATTGGTTTTGTG+TGG | + | chr7_4:45411189-45411208 | Msa1156840:intron | 25.0% |
| ! | TTACAGTATAGTTCTTAACA+AGG | - | chr7_4:45411300-45411319 | None:intergenic | 25.0% |
| !!! | TATACTGTAAGTTGATATTC+TGG | + | chr7_4:45411310-45411329 | Msa1156840:intron | 25.0% |
| !!! | TTGATTTTAGTTGGAAATTC+TGG | + | chr7_4:45411376-45411395 | Msa1156840:intron | 25.0% |
| !!! | TTTTTTAGTTCCCTAACTTA+AGG | + | chr7_4:45411564-45411583 | Msa1156840:intron | 25.0% |
| ! | TTCAAAAGTAGTGTTACAAT+TGG | + | chr7_4:45411613-45411632 | Msa1156840:intron | 25.0% |
| ! | TTGAAATGTGCTACAATTAA+TGG | - | chr7_4:45411806-45411825 | None:intergenic | 25.0% |
| ! | TTATTATTATCCACTTCCAT+AGG | + | chr7_4:45411922-45411941 | Msa1156840:intron | 25.0% |
| ! | CATTACAAATATCTAAAAGC+AGG | - | chr7_4:45412614-45412633 | None:intergenic | 25.0% |
| !!! | CTGCTTTTAGATATTTGTAA+TGG | + | chr7_4:45412612-45412631 | Msa1156840:intron | 25.0% |
| ! | ATGATACTCATTTGGAAATA+CGG | - | chr7_4:45412664-45412683 | None:intergenic | 25.0% |
| ! | CTACTATAATGATACTCATT+TGG | - | chr7_4:45412672-45412691 | None:intergenic | 25.0% |
| ! | TCATTATAGTAGTCCTTAAA+TGG | + | chr7_4:45412680-45412699 | Msa1156840:intron | 25.0% |
| !!! | AAGAATTTACGCTTGTTATT+AGG | + | chr7_4:45412703-45412722 | Msa1156840:intron | 25.0% |
| !!! | AGAATTTACGCTTGTTATTA+GGG | + | chr7_4:45412704-45412723 | Msa1156840:intron | 25.0% |
| ! | AAATCTAATTTGGATCAGTT+TGG | - | chr7_4:45412747-45412766 | None:intergenic | 25.0% |
| ! | ACTGATCCAAATTAGATTTA+TGG | + | chr7_4:45412748-45412767 | Msa1156840:intron | 25.0% |
| ! | CTGTATCCATAAATCTAATT+TGG | - | chr7_4:45412757-45412776 | None:intergenic | 25.0% |
| ! | TTAGATTTATGGATACAGTT+TGG | + | chr7_4:45412759-45412778 | Msa1156840:intron | 25.0% |
| ! | TCTACTTTCACAAAACAAAT+TGG | + | chr7_4:45412790-45412809 | Msa1156840:intron | 25.0% |
| ! | AGATATAACAGAAGAAAAAG+TGG | - | chr7_4:45413060-45413079 | None:intergenic | 25.0% |
| !!! | GTTACTTTATCATTGACTTT+TGG | + | chr7_4:45413468-45413487 | Msa1156840:intron | 25.0% |
| ! | TTGGAAAACAATTCAGATAT+AGG | - | chr7_4:45413497-45413516 | None:intergenic | 25.0% |
| !! | CAGATCAGTTTTTCTTAAAA+TGG | + | chr7_4:45413548-45413567 | Msa1156840:intron | 25.0% |
| !!! | TGTGGTTTTAATAACAAGTA+GGG | - | chr7_4:45413643-45413662 | None:intergenic | 25.0% |
| !!! | ATGTGGTTTTAATAACAAGT+AGG | - | chr7_4:45413644-45413663 | None:intergenic | 25.0% |
| ! | AACATTAATCGTAAAATCGT+AGG | - | chr7_4:45413747-45413766 | None:intergenic | 25.0% |
| !! | TTTCACTAATTTAGGATTCT+GGG | - | chr7_4:45413792-45413811 | None:intergenic | 25.0% |
| !! | ATTTCACTAATTTAGGATTC+TGG | - | chr7_4:45413793-45413812 | None:intergenic | 25.0% |
| ! | ATCGTGAATTTAACGATTAA+GGG | - | chr7_4:45413831-45413850 | None:intergenic | 25.0% |
| !! | ATTTTACATATAATCCGCAA+GGG | - | chr7_4:45414151-45414170 | None:intergenic | 25.0% |
| !! | GCATTTTCAAAATATAGAAG+AGG | - | chr7_4:45414196-45414215 | None:intergenic | 25.0% |
| !!! | TATCAACACATAGTTTTAAG+TGG | + | chr7_4:45414262-45414281 | Msa1156840:CDS | 25.0% |
| ! | AAGGAGAAATAAACAATTAC+CGG | - | chr7_4:45414318-45414337 | None:intergenic | 25.0% |
| ! | GAAAATTAAACTAGTGAATG+AGG | - | chr7_4:45414436-45414455 | None:intergenic | 25.0% |
| !! | TTAATTTTCAGCTAAATCCA+TGG | + | chr7_4:45414447-45414466 | Msa1156840:intron | 25.0% |
| ! | CTATATACTAACCAGTTAAA+AGG | + | chr7_4:45414486-45414505 | Msa1156840:intron | 25.0% |
| !!! | CTTGTACATGTATTTTGAAA+TGG | - | chr7_4:45414590-45414609 | None:intergenic | 25.0% |
| ! | CATTATTGTTAGTGTAGAAT+TGG | + | chr7_4:45414641-45414660 | Msa1156840:intron | 25.0% |
| ! | ACAATAGGTGATCAAAAATA+TGG | - | chr7_4:45414747-45414766 | None:intergenic | 25.0% |
| !! | TCTAGAACTCTATTATATGT+TGG | + | chr7_4:45414821-45414840 | Msa1156840:intron | 25.0% |
| !! | GGAATGTAGTTAATTTTGTA+TGG | + | chr7_4:45414992-45415011 | Msa1156840:intron | 25.0% |
| ! | GAAAGAGAAATAAATAGCAA+AGG | + | chr7_4:45415093-45415112 | Msa1156840:intron | 25.0% |
| ! | TAATAAACAATTTATGACGG+AGG | + | chr7_4:45415163-45415182 | Msa1156840:intron | 25.0% |
| !! | AATAAACAATTTATGACGGA+GGG | + | chr7_4:45415164-45415183 | Msa1156840:intron | 25.0% |
| !!! | TAGACTTACCAACTTTATTT+TGG | - | chr7_4:45415267-45415286 | None:intergenic | 25.0% |
| !! | TCTTTTTCCAATCTGAAAAT+GGG | - | chr7_4:45415306-45415325 | None:intergenic | 25.0% |
| !! | TTCTTTTTCCAATCTGAAAA+TGG | - | chr7_4:45415307-45415326 | None:intergenic | 25.0% |
| ! | ATACACATGTAGAAAAAAGA+GGG | - | chr7_4:45415401-45415420 | None:intergenic | 25.0% |
| !! | GTTATTGTTATTATTTGGGT+AGG | - | chr7_4:45415663-45415682 | None:intergenic | 25.0% |
| !! | TAAGACATTGTTGGTTATTA+AGG | - | chr7_4:45415687-45415706 | None:intergenic | 25.0% |
| ! | TAGTAAGAATAGTAGGAAAA+TGG | - | chr7_4:45415710-45415729 | None:intergenic | 25.0% |
| !!! | AAGTACTGTTTTATAGTCAT+TGG | + | chr7_4:45415922-45415941 | Msa1156840:intron | 25.0% |
| !! | AGTACTGTTTTATAGTCATT+GGG | + | chr7_4:45415923-45415942 | Msa1156840:intron | 25.0% |
| !!! | ACCTTATATTTTAGTAGCTA+TGG | + | chr7_4:45416187-45416206 | Msa1156840:intron | 25.0% |
| ! | TCCATAGCTACTAAAATATA+AGG | - | chr7_4:45416191-45416210 | None:intergenic | 25.0% |
| !!! | ATACTCTAAAGTGAATAATG+TGG | - | chr7_4:45416322-45416341 | None:intergenic | 25.0% |
| ! | ACAATTGTAAACTTATGTGT+TGG | + | chr7_4:45416803-45416822 | Msa1156840:intron | 25.0% |
| ! | AAGCATTGCAAACACTATAT+GGG | - | chr7_4:45409048-45409067 | None:intergenic | 30.0% |
| ATATAGTGTTTGCAATGCTT+GGG | + | chr7_4:45409048-45409067 | Msa1156840:intron | 30.0% | |
| !! | ATCTTACAAGTCAGTTTTGT+TGG | + | chr7_4:45409079-45409098 | Msa1156840:intron | 30.0% |
| TTGAAAGCAGGAAAATAAAG+TGG | - | chr7_4:45409145-45409164 | None:intergenic | 30.0% | |
| CCAACAACAATATCCTAAAA+TGG | - | chr7_4:45409227-45409246 | None:intergenic | 30.0% | |
| !!! | CCATTTTAGGATATTGTTGT+TGG | + | chr7_4:45409224-45409243 | Msa1156840:intron | 30.0% |
| ATATCTTATCCTGTGAACAA+TGG | + | chr7_4:45409281-45409300 | Msa1156840:CDS | 30.0% | |
| !! | TTTGATTTTGTACCTAACTC+TGG | + | chr7_4:45409401-45409420 | Msa1156840:intron | 30.0% |
| !!! | TTTTTTCACGATTCTTTGAG+GGG | - | chr7_4:45409494-45409513 | None:intergenic | 30.0% |
| !!! | CATTTTTTCACGATTCTTTG+AGG | - | chr7_4:45409496-45409515 | None:intergenic | 30.0% |
| CTCAAAGAATCGTGAAAAAA+TGG | + | chr7_4:45409494-45409513 | Msa1156840:CDS | 30.0% | |
| TTTACATGATTTGACCTTGT+AGG | + | chr7_4:45409575-45409594 | Msa1156840:intron | 30.0% | |
| !! | TTTGAGAAGTACAATTTTGC+TGG | + | chr7_4:45409609-45409628 | Msa1156840:CDS | 30.0% |
| CATATAATGTTAGAACAGCT+TGG | - | chr7_4:45409650-45409669 | None:intergenic | 30.0% | |
| TATGGGTGTAAACTCTAATT+AGG | - | chr7_4:45409731-45409750 | None:intergenic | 30.0% | |
| GAATGAGTAACAGTAAGTAT+GGG | - | chr7_4:45409748-45409767 | None:intergenic | 30.0% | |
| AGAATGAGTAACAGTAAGTA+TGG | - | chr7_4:45409749-45409768 | None:intergenic | 30.0% | |
| TACTTACTGTTACTCATTCT+TGG | + | chr7_4:45409749-45409768 | Msa1156840:intron | 30.0% | |
| TCGTTTATTATTAGGTCTCT+TGG | + | chr7_4:45409922-45409941 | Msa1156840:intron | 30.0% | |
| CGTTTATTATTAGGTCTCTT+GGG | + | chr7_4:45409923-45409942 | Msa1156840:intron | 30.0% | |
| ! | TTTGTTATGAGCAACCAAAA+GGG | - | chr7_4:45410183-45410202 | None:intergenic | 30.0% |
| !! | ATTTGTTATGAGCAACCAAA+AGG | - | chr7_4:45410184-45410203 | None:intergenic | 30.0% |
| GACAAACTATATTGCAAAGT+TGG | + | chr7_4:45410318-45410337 | Msa1156840:intron | 30.0% | |
| ! | CTATATTGCAAAGTTGGTTA+TGG | + | chr7_4:45410324-45410343 | Msa1156840:intron | 30.0% |
| TATTCATACTACAGTCACAA+AGG | + | chr7_4:45410398-45410417 | Msa1156840:intron | 30.0% | |
| ATTCATACTACAGTCACAAA+GGG | + | chr7_4:45410399-45410418 | Msa1156840:intron | 30.0% | |
| !!! | CTACAATCTCTTGTTTTTCT+AGG | - | chr7_4:45410443-45410462 | None:intergenic | 30.0% |
| GAAAAACAAGAGATTGTAGT+TGG | + | chr7_4:45410444-45410463 | Msa1156840:intron | 30.0% | |
| ACATTCACCAATTATAGTGT+TGG | + | chr7_4:45410741-45410760 | Msa1156840:intron | 30.0% | |
| AGAAAGCAAATCAACAAGAT+AGG | - | chr7_4:45410972-45410991 | None:intergenic | 30.0% | |
| !! | ATCTTGTTGATTTGCTTTCT+AGG | + | chr7_4:45410972-45410991 | Msa1156840:CDS | 30.0% |
| GTTAGAGTTGAAGCATAAAA+AGG | - | chr7_4:45411059-45411078 | None:intergenic | 30.0% | |
| !!! | ATTCTGATTTTGAGACTGTA+AGG | + | chr7_4:45411120-45411139 | Msa1156840:CDS | 30.0% |
| !!! | TTCTGATTTTGAGACTGTAA+GGG | + | chr7_4:45411121-45411140 | Msa1156840:CDS | 30.0% |
| AAGAGAAACTGTGCTATATA+AGG | + | chr7_4:45411150-45411169 | Msa1156840:CDS | 30.0% | |
| ATAACTGCAGGAAAATAGAT+GGG | - | chr7_4:45411236-45411255 | None:intergenic | 30.0% | |
| ATAGTTCTTAACAAGGATTG+TGG | - | chr7_4:45411293-45411312 | None:intergenic | 30.0% | |
| AATAATCATTTACGCAGAAC+TGG | - | chr7_4:45411358-45411377 | None:intergenic | 30.0% | |
| !!! | ATTTTAGTTGGAAATTCTGG+TGG | + | chr7_4:45411379-45411398 | Msa1156840:intron | 30.0% |
| AAGGCACAAAAACAATGAAT+TGG | - | chr7_4:45411473-45411492 | None:intergenic | 30.0% | |
| CAAATTACAGACATGCATTA+AGG | - | chr7_4:45411492-45411511 | None:intergenic | 30.0% | |
| GAAAGTTTACAGACTAGAAT+CGG | - | chr7_4:45411596-45411615 | None:intergenic | 30.0% | |
| ! | GAATATTGCATGGACTAAAT+TGG | + | chr7_4:45411738-45411757 | Msa1156840:intron | 30.0% |
| AGGGACTAAAATAAAACAAC+TGG | + | chr7_4:45411778-45411797 | Msa1156840:intron | 30.0% | |
| CTGTAATTACTCCAAATGAA+TGG | + | chr7_4:45411871-45411890 | Msa1156840:intron | 30.0% | |
| TAATTACTCCAAATGAATGG+AGG | + | chr7_4:45411874-45411893 | Msa1156840:intron | 30.0% | |
| AAAAAAAACACCTATGGAAG+TGG | - | chr7_4:45411935-45411954 | None:intergenic | 30.0% | |
| ! | TTTTGAATGGTCACTTCTAT+AGG | + | chr7_4:45411955-45411974 | Msa1156840:intron | 30.0% |
| TTTGAATGGTCACTTCTATA+GGG | + | chr7_4:45411956-45411975 | Msa1156840:intron | 30.0% | |
| AATTTAATAACCCTTCCATC+TGG | - | chr7_4:45412068-45412087 | None:intergenic | 30.0% | |
| AGATGGAAGGGTTATTAAAT+TGG | + | chr7_4:45412067-45412086 | Msa1156840:CDS | 30.0% | |
| GATGGAAGGGTTATTAAATT+GGG | + | chr7_4:45412068-45412087 | Msa1156840:CDS | 30.0% | |
| AAGAAATGGATATTGACAAC+CGG | + | chr7_4:45412403-45412422 | Msa1156840:CDS | 30.0% | |
| ACAAATATCTAAAAGCAGGT+GGG | - | chr7_4:45412610-45412629 | None:intergenic | 30.0% | |
| TACAAATATCTAAAAGCAGG+TGG | - | chr7_4:45412611-45412630 | None:intergenic | 30.0% | |
| AGCGTAAATTCTTCCATTTA+AGG | - | chr7_4:45412696-45412715 | None:intergenic | 30.0% | |
| !! | GAATTTACGCTTGTTATTAG+GGG | + | chr7_4:45412705-45412724 | Msa1156840:intron | 30.0% |
| ! | CAGAAGAAAAACTGATTCAA+GGG | - | chr7_4:45412978-45412997 | None:intergenic | 30.0% |
| TCGCAAGATATTGATATCAA+GGG | - | chr7_4:45413174-45413193 | None:intergenic | 30.0% | |
| ATCGCAAGATATTGATATCA+AGG | - | chr7_4:45413175-45413194 | None:intergenic | 30.0% | |
| ! | TTTTTGTAAGGAAGAACCAT+TGG | - | chr7_4:45413273-45413292 | None:intergenic | 30.0% |
| !!! | ATTTTTTGAAGAAGCATCGA+AGG | - | chr7_4:45413310-45413329 | None:intergenic | 30.0% |
| ! | TATCTGAATTGTTTTCCAAC+CGG | + | chr7_4:45413498-45413517 | Msa1156840:intron | 30.0% |
| !!! | GTGGTTTTAATAACAAGTAG+GGG | - | chr7_4:45413642-45413661 | None:intergenic | 30.0% |
| ! | TTTTACGATTAATGTTGCCT+TGG | + | chr7_4:45413751-45413770 | Msa1156840:intron | 30.0% |
| GATCGTGAATTTAACGATTA+AGG | - | chr7_4:45413832-45413851 | None:intergenic | 30.0% | |
| ATGAATGATGCACTTAAACT+CGG | - | chr7_4:45413881-45413900 | None:intergenic | 30.0% | |
| TTTAAGTGCATCATTCATGT+AGG | + | chr7_4:45413883-45413902 | Msa1156840:intron | 30.0% | |
| GCATATAAAATGGCATACAT+AGG | - | chr7_4:45414054-45414073 | None:intergenic | 30.0% | |
| ! | TTTTACATATAATCCGCAAG+GGG | - | chr7_4:45414150-45414169 | None:intergenic | 30.0% |
| ! | GATTTTACATATAATCCGCA+AGG | - | chr7_4:45414152-45414171 | None:intergenic | 30.0% |
| AAAATATAGAAGAGGAAGCA+AGG | - | chr7_4:45414188-45414207 | None:intergenic | 30.0% | |
| AAAGCTGCAAGACAAAAAAT+CGG | - | chr7_4:45414243-45414262 | None:intergenic | 30.0% | |
| !!! | AACACATAGTTTTAAGTGGA+GGG | + | chr7_4:45414266-45414285 | Msa1156840:CDS | 30.0% |
| GACAATTAGAGCTAATGTAA+AGG | - | chr7_4:45414337-45414356 | None:intergenic | 30.0% | |
| ! | GACAATACATACCTTTTAAC+TGG | - | chr7_4:45414500-45414519 | None:intergenic | 30.0% |
| !!! | AGTGTAAATTAGTTTTACCC+TGG | + | chr7_4:45414520-45414539 | Msa1156840:intron | 30.0% |
| ATAGTGAAGTGAGTTCTTAT+TGG | - | chr7_4:45414549-45414568 | None:intergenic | 30.0% | |
| TCAAAATACATGTACAAGAG+TGG | + | chr7_4:45414592-45414611 | Msa1156840:intron | 30.0% | |
| CAAAATACATGTACAAGAGT+GGG | + | chr7_4:45414593-45414612 | Msa1156840:intron | 30.0% | |
| TGTAGAATTGGTTACATTGA+TGG | + | chr7_4:45414653-45414672 | Msa1156840:intron | 30.0% | |
| ATATGGAGCATGCATATATA+AGG | - | chr7_4:45414730-45414749 | None:intergenic | 30.0% | |
| ! | TGTACCTCCATATTTTTCTT+TGG | + | chr7_4:45414787-45414806 | Msa1156840:intron | 30.0% |
| TTGTCCAAAGAAAAATATGG+AGG | - | chr7_4:45414794-45414813 | None:intergenic | 30.0% | |
| !!! | TCATTTTAGCTGAGATGAAA+GGG | - | chr7_4:45414874-45414893 | None:intergenic | 30.0% |
| !!! | ATCATTTTAGCTGAGATGAA+AGG | - | chr7_4:45414875-45414894 | None:intergenic | 30.0% |
| TTCTATACATATTGCAAGCA+AGG | + | chr7_4:45414901-45414920 | Msa1156840:intron | 30.0% | |
| CCAAAGTGACTTATAATTTG+GGG | - | chr7_4:45414954-45414973 | None:intergenic | 30.0% | |
| GCCAAAGTGACTTATAATTT+GGG | - | chr7_4:45414955-45414974 | None:intergenic | 30.0% | |
| TGCCAAAGTGACTTATAATT+TGG | - | chr7_4:45414956-45414975 | None:intergenic | 30.0% | |
| TGGCAATTTCACACATATTA+AGG | + | chr7_4:45414971-45414990 | Msa1156840:intron | 30.0% | |
| CTTTCCCATACAAATAATGA+AGG | - | chr7_4:45415050-45415069 | None:intergenic | 30.0% | |
| CTGTGTTTCCAAAATAAAGT+TGG | + | chr7_4:45415256-45415275 | Msa1156840:intron | 30.0% | |
| ! | TTTTTCCAATCTGAAAATGG+GGG | - | chr7_4:45415304-45415323 | None:intergenic | 30.0% |
| ! | CTTTTTCCAATCTGAAAATG+GGG | - | chr7_4:45415305-45415324 | None:intergenic | 30.0% |
| AGAAATACATGATCGTTATC+TGG | + | chr7_4:45415323-45415342 | Msa1156840:CDS | 30.0% | |
| !!! | TTATCTGGATGTTGTTTTGA+AGG | + | chr7_4:45415338-45415357 | Msa1156840:CDS | 30.0% |
| !!! | TATCTGGATGTTGTTTTGAA+GGG | + | chr7_4:45415339-45415358 | Msa1156840:CDS | 30.0% |
| AAAAAGAGGGAAAAGAACAA+TGG | - | chr7_4:45415388-45415407 | None:intergenic | 30.0% | |
| GATACACATGTAGAAAAAAG+AGG | - | chr7_4:45415402-45415421 | None:intergenic | 30.0% | |
| GAAAACAATAGAAACTGAAC+TGG | + | chr7_4:45415541-45415560 | Msa1156840:intron | 30.0% | |
| GTGTTCTTAGTAAGAATAGT+AGG | - | chr7_4:45415717-45415736 | None:intergenic | 30.0% | |
| TTACTAAGAACACACACAAT+TGG | + | chr7_4:45415724-45415743 | Msa1156840:intron | 30.0% | |
| GAAATTACGATTGAGAATTG+AGG | + | chr7_4:45416017-45416036 | Msa1156840:intron | 30.0% | |
| TTAGTAGCTATGGATGTAAT+TGG | + | chr7_4:45416197-45416216 | Msa1156840:intron | 30.0% | |
| ATGACGCTTAATTTCAAACT+AGG | - | chr7_4:45416366-45416385 | None:intergenic | 30.0% | |
| !! | CTTATTTTCAGTGTGATTAC+TGG | - | chr7_4:45416515-45416534 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr7_4:45417098-45417117 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr7_4:45417099-45417118 | Msa1156840:intron | 30.0% |
| ! | ATTTGAGATTGGTGATTTCG+TGG | - | chr7_4:45408647-45408666 | None:intergenic | 35.0% |
| TTCATTCAGTATGTGAAGTG+TGG | + | chr7_4:45408745-45408764 | Msa1156840:intron | 35.0% | |
| CACAAGGAAAAACAGAAGTT+GGG | - | chr7_4:45408789-45408808 | None:intergenic | 35.0% | |
| ACACAAGGAAAAACAGAAGT+TGG | - | chr7_4:45408790-45408809 | None:intergenic | 35.0% | |
| !! | AACTTCTGTTTTTCCTTGTG+TGG | + | chr7_4:45408789-45408808 | Msa1156840:CDS | 35.0% |
| ATCGAAAAATCATGTTTGGC+TGG | - | chr7_4:45408873-45408892 | None:intergenic | 35.0% | |
| GCAGATCGAAAAATCATGTT+TGG | - | chr7_4:45408877-45408896 | None:intergenic | 35.0% | |
| ! | ATGCTCTAAATGTTTCGTCA+TGG | + | chr7_4:45408905-45408924 | Msa1156840:intron | 35.0% |
| TTAATATGGGTGGAGTAACA+AGG | - | chr7_4:45408947-45408966 | None:intergenic | 35.0% | |
| ! | AAAGTGTGGATTAATATGGG+TGG | - | chr7_4:45408957-45408976 | None:intergenic | 35.0% |
| !! | GATGTCTGAATTCTAAAGTG+TGG | - | chr7_4:45408971-45408990 | None:intergenic | 35.0% |
| CATCCATTTCTGAATCTAAG+CGG | + | chr7_4:45408987-45409006 | Msa1156840:intron | 35.0% | |
| ATCCATTTCTGAATCTAAGC+GGG | + | chr7_4:45408988-45409007 | Msa1156840:intron | 35.0% | |
| ATATGGGACATATCTCTAGT+TGG | - | chr7_4:45409032-45409051 | None:intergenic | 35.0% | |
| ! | CAAGCATTGCAAACACTATA+TGG | - | chr7_4:45409049-45409068 | None:intergenic | 35.0% |
| CATATAGTGTTTGCAATGCT+TGG | + | chr7_4:45409047-45409066 | Msa1156840:intron | 35.0% | |
| !! | CTAAGCAACATTTTGAAAGC+AGG | - | chr7_4:45409157-45409176 | None:intergenic | 35.0% |
| ! | CTGCTTTCAAAATGTTGCTT+AGG | + | chr7_4:45409155-45409174 | Msa1156840:intron | 35.0% |
| ACAATGGAATCGTTCAAAAC+TGG | + | chr7_4:45409297-45409316 | Msa1156840:CDS | 35.0% | |
| CAATGGAATCGTTCAAAACT+GGG | + | chr7_4:45409298-45409317 | Msa1156840:CDS | 35.0% | |
| GTAGAATCTTACAGTCTTGA+GGG | - | chr7_4:45409452-45409471 | None:intergenic | 35.0% | |
| AGTAGAATCTTACAGTCTTG+AGG | - | chr7_4:45409453-45409472 | None:intergenic | 35.0% | |
| ! | GCAACTAAGGATTAGCAAAA+GGG | - | chr7_4:45409541-45409560 | None:intergenic | 35.0% |
| ! | AGCAACTAAGGATTAGCAAA+AGG | - | chr7_4:45409542-45409561 | None:intergenic | 35.0% |
| AAACATTGTCTCAACCTACA+AGG | - | chr7_4:45409592-45409611 | None:intergenic | 35.0% | |
| GTTCTAACATTATATGCCCA+AGG | + | chr7_4:45409654-45409673 | Msa1156840:CDS | 35.0% | |
| CAAAGAACGCACACTAATAA+AGG | - | chr7_4:45409964-45409983 | None:intergenic | 35.0% | |
| !! | GACTGGATTAGTTATAGACT+CGG | + | chr7_4:45410022-45410041 | Msa1156840:CDS | 35.0% |
| !! | ACTGGATTAGTTATAGACTC+GGG | + | chr7_4:45410023-45410042 | Msa1156840:CDS | 35.0% |
| TGGTTGCTCATAACAAATAG+TGG | + | chr7_4:45410186-45410205 | Msa1156840:intron | 35.0% | |
| ! | AAGTTGGTTATGGATGAGTT+TGG | + | chr7_4:45410334-45410353 | Msa1156840:intron | 35.0% |
| !! | TTGGATGGATTAAAACCTGA+TGG | + | chr7_4:45410353-45410372 | Msa1156840:intron | 35.0% |
| !! | TGGATGGATTAAAACCTGAT+GGG | + | chr7_4:45410354-45410373 | Msa1156840:intron | 35.0% |
| TTCATACTACAGTCACAAAG+GGG | + | chr7_4:45410400-45410419 | Msa1156840:intron | 35.0% | |
| TTGTGTGCCAACACTATAAT+TGG | - | chr7_4:45410751-45410770 | None:intergenic | 35.0% | |
| TGATGTAGATCCATCGTTTA+AGG | + | chr7_4:45410774-45410793 | Msa1156840:intron | 35.0% | |
| ! | CATTTTGCTTCCTTAAACGA+TGG | - | chr7_4:45410787-45410806 | None:intergenic | 35.0% |
| TCGTTTAAGGAAGCAAAATG+TGG | + | chr7_4:45410787-45410806 | Msa1156840:intron | 35.0% | |
| !!! | CAAGTTTTGGATTTTGATCC+AGG | + | chr7_4:45410874-45410893 | Msa1156840:intron | 35.0% |
| AATGAATAGCCATCAACAAC+TGG | - | chr7_4:45410902-45410921 | None:intergenic | 35.0% | |
| CAAGATAGGAAGTTATGTGT+CGG | - | chr7_4:45410958-45410977 | None:intergenic | 35.0% | |
| !! | TTGTTGATTTGCTTTCTAGG+AGG | + | chr7_4:45410975-45410994 | Msa1156840:CDS | 35.0% |
| !! | TGTTGATTTGCTTTCTAGGA+GGG | + | chr7_4:45410976-45410995 | Msa1156840:CDS | 35.0% |
| CTTATTCACTGCATATCTTG+AGG | - | chr7_4:45411099-45411118 | None:intergenic | 35.0% | |
| GAAACTGTGCTATATAAGGT+TGG | + | chr7_4:45411154-45411173 | Msa1156840:intron | 35.0% | |
| CATAACTGCAGGAAAATAGA+TGG | - | chr7_4:45411237-45411256 | None:intergenic | 35.0% | |
| TACAAGAGGGAATATCAGTT+GGG | + | chr7_4:45411259-45411278 | Msa1156840:CDS | 35.0% | |
| ATAATGGTCCTCCATTCATT+TGG | - | chr7_4:45411885-45411904 | None:intergenic | 35.0% | |
| TTTCTAAATCAGCTTCCAGA+TGG | + | chr7_4:45412050-45412069 | Msa1156840:intron | 35.0% | |
| !! | TTATTAAATTGGGCACCGAA+AGG | + | chr7_4:45412078-45412097 | Msa1156840:CDS | 35.0% |
| AAAGCTGATGTAGAGAAAAC+AGG | - | chr7_4:45412159-45412178 | None:intergenic | 35.0% | |
| !!! | TTTTCTGGCTTATGATTGCT+TGG | + | chr7_4:45412305-45412324 | Msa1156840:intron | 35.0% |
| TCTATAAGTTCCTGCAAGAA+GGG | - | chr7_4:45412339-45412358 | None:intergenic | 35.0% | |
| ATCTATAAGTTCCTGCAAGA+AGG | - | chr7_4:45412340-45412359 | None:intergenic | 35.0% | |
| CAGGAACTTATAGATGTTGA+AGG | + | chr7_4:45412345-45412364 | Msa1156840:intron | 35.0% | |
| CTTATAGATGTTGAAGGTGA+TGG | + | chr7_4:45412351-45412370 | Msa1156840:CDS | 35.0% | |
| ATTTCGCTGCATTCAAGAAA+TGG | + | chr7_4:45412389-45412408 | Msa1156840:CDS | 35.0% | |
| CAAGACACAGTATTTCACTT+TGG | + | chr7_4:45412477-45412496 | Msa1156840:intron | 35.0% | |
| AAGGATTTATTTGGTCGAGT+TGG | - | chr7_4:45412556-45412575 | None:intergenic | 35.0% | |
| CAAATATCTAAAAGCAGGTG+GGG | - | chr7_4:45412609-45412628 | None:intergenic | 35.0% | |
| TTCATGCAAAAAAACGGTTC+GGG | - | chr7_4:45412908-45412927 | None:intergenic | 35.0% | |
| GTTCATGCAAAAAAACGGTT+CGG | - | chr7_4:45412909-45412928 | None:intergenic | 35.0% | |
| !!! | AACCGTTTTTTTGCATGAAC+CGG | + | chr7_4:45412909-45412928 | Msa1156840:intron | 35.0% |
| ! | AACCGGTTCATGCAAAAAAA+CGG | - | chr7_4:45412914-45412933 | None:intergenic | 35.0% |
| GATTCAAGGGTAAAAAAACC+AGG | - | chr7_4:45412965-45412984 | None:intergenic | 35.0% | |
| ! | GCAGAAGAAAAACTGATTCA+AGG | - | chr7_4:45412979-45412998 | None:intergenic | 35.0% |
| TCAAAATGGAATAAACCGGT+TGG | - | chr7_4:45413516-45413535 | None:intergenic | 35.0% | |
| GAACAGATCGATGCAATTAT+TGG | + | chr7_4:45413585-45413604 | Msa1156840:intron | 35.0% | |
| ! | GATCGATGCAATTATTGGTT+CGG | + | chr7_4:45413590-45413609 | Msa1156840:intron | 35.0% |
| TGAATGATGCACTTAAACTC+GGG | - | chr7_4:45413880-45413899 | None:intergenic | 35.0% | |
| CGTAACGTGGAATAATTGTA+TGG | - | chr7_4:45414218-45414237 | None:intergenic | 35.0% | |
| !!! | CAACACATAGTTTTAAGTGG+AGG | + | chr7_4:45414265-45414284 | Msa1156840:CDS | 35.0% |
| ! | GAAATAAACAATTACCGGCT+TGG | - | chr7_4:45414313-45414332 | None:intergenic | 35.0% |
| AGAGTCATGCAATACATGTT+CGG | - | chr7_4:45414411-45414430 | None:intergenic | 35.0% | |
| ! | CTCTTTTAAACTCACAGTGT+CGG | + | chr7_4:45414681-45414700 | Msa1156840:intron | 35.0% |
| !! | CATCTTAAGTACTGGACAAT+AGG | - | chr7_4:45414762-45414781 | None:intergenic | 35.0% |
| ACAGTGAACATCTTAAGTAC+TGG | - | chr7_4:45414770-45414789 | None:intergenic | 35.0% | |
| AAGTGACTTATAATTTGGGG+CGG | - | chr7_4:45414951-45414970 | None:intergenic | 35.0% | |
| CCCCAAATTATAAGTCACTT+TGG | + | chr7_4:45414951-45414970 | Msa1156840:intron | 35.0% | |
| !! | TGGCTCTTCTAAAATCGTTT+GGG | + | chr7_4:45415229-45415248 | Msa1156840:intron | 35.0% |
| ! | TTTTCCAATCTGAAAATGGG+GGG | - | chr7_4:45415303-45415322 | None:intergenic | 35.0% |
| TGAAACTGAACTTGACAAAC+AGG | + | chr7_4:45415598-45415617 | Msa1156840:intron | 35.0% | |
| GGAAAATGGTAAGACATTGT+TGG | - | chr7_4:45415696-45415715 | None:intergenic | 35.0% | |
| AAACTGACTGAAGTCAGTTA+TGG | + | chr7_4:45415784-45415803 | Msa1156840:intron | 35.0% | |
| TTATAGTCATTGGGAGAATG+AGG | + | chr7_4:45415932-45415951 | Msa1156840:intron | 35.0% | |
| TATAGTCATTGGGAGAATGA+GGG | + | chr7_4:45415933-45415952 | Msa1156840:intron | 35.0% | |
| AAACCTTCATTATTCCTGCA+AGG | - | chr7_4:45416086-45416105 | None:intergenic | 35.0% | |
| CATCCAAGAAAGTTTGTCTT+TGG | + | chr7_4:45416383-45416402 | Msa1156840:intron | 35.0% | |
| !!! | ACCAGAGTTTTGGATTAACA+GGG | + | chr7_4:45416425-45416444 | Msa1156840:CDS | 35.0% |
| AGGGAAGATTATCTAGAAGA+AGG | + | chr7_4:45416444-45416463 | Msa1156840:CDS | 35.0% | |
| TTACTGGAACTCAATAAGTC+AGG | - | chr7_4:45416499-45416518 | None:intergenic | 35.0% | |
| TGTGAACAAAATCACATCAG+AGG | + | chr7_4:45416544-45416563 | Msa1156840:three_prime_UTR | 35.0% | |
| TGTTTAATGCAAGCTGTTGA+AGG | - | chr7_4:45416611-45416630 | None:intergenic | 35.0% | |
| GTTGGCAATATCCAAGTTAA+TGG | + | chr7_4:45416821-45416840 | Msa1156840:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr7_4:45416864-45416883 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+AGG | - | chr7_4:45416964-45416983 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr7_4:45416968-45416987 | None:intergenic | 35.0% |
| !! | TATGTGAAGTGTGGTTTTGC+TGG | + | chr7_4:45408754-45408773 | Msa1156840:CDS | 40.0% |
| !! | ATGTGAAGTGTGGTTTTGCT+GGG | + | chr7_4:45408755-45408774 | Msa1156840:CDS | 40.0% |
| !! | TTCTGTTTTTCCTTGTGTGG+TGG | + | chr7_4:45408792-45408811 | Msa1156840:CDS | 40.0% |
| !! | TCTGTTTTTCCTTGTGTGGT+GGG | + | chr7_4:45408793-45408812 | Msa1156840:CDS | 40.0% |
| GATTCTTCGTAACGAAGCAT+TGG | - | chr7_4:45408823-45408842 | None:intergenic | 40.0% | |
| ! | TAGGATATTGTTGTTGGCGA+AGG | + | chr7_4:45409230-45409249 | Msa1156840:intron | 40.0% |
| TGAACGATTCCATTGTTCAC+AGG | - | chr7_4:45409293-45409312 | None:intergenic | 40.0% | |
| ! | GAAAAGCATGTACCAGAGTT+AGG | - | chr7_4:45409416-45409435 | None:intergenic | 40.0% |
| CTCATCTCTATAAGCACCTT+GGG | - | chr7_4:45409673-45409692 | None:intergenic | 40.0% | |
| ACTCATCTCTATAAGCACCT+TGG | - | chr7_4:45409674-45409693 | None:intergenic | 40.0% | |
| GTGCTTATAGAGATGAGTGA+AGG | + | chr7_4:45409676-45409695 | Msa1156840:intron | 40.0% | |
| GTGCATTCATAACAGTTCCT+TGG | + | chr7_4:45409983-45410002 | Msa1156840:intron | 40.0% | |
| TTAGTTATAGACTCGGGTGA+TGG | + | chr7_4:45410029-45410048 | Msa1156840:CDS | 40.0% | |
| TGGTTATGGATGAGTTTGGA+TGG | + | chr7_4:45410338-45410357 | Msa1156840:intron | 40.0% | |
| TCATACTACAGTCACAAAGG+GGG | + | chr7_4:45410401-45410420 | Msa1156840:intron | 40.0% | |
| AGTGACACATGCATACATTC+AGG | - | chr7_4:45410596-45410615 | None:intergenic | 40.0% | |
| GCTTAAAGCAAAAGCCATGA+AGG | - | chr7_4:45410638-45410657 | None:intergenic | 40.0% | |
| TCATTCGTTTCGTCAGATGA+GGG | - | chr7_4:45410925-45410944 | None:intergenic | 40.0% | |
| TTCATTCGTTTCGTCAGATG+AGG | - | chr7_4:45410926-45410945 | None:intergenic | 40.0% | |
| ACGAAACGAATGAATGTAGC+TGG | + | chr7_4:45410932-45410951 | Msa1156840:CDS | 40.0% | |
| !! | GTTGATTTGCTTTCTAGGAG+GGG | + | chr7_4:45410977-45410996 | Msa1156840:CDS | 40.0% |
| !! | TTGATTTGCTTTCTAGGAGG+GGG | + | chr7_4:45410978-45410997 | Msa1156840:CDS | 40.0% |
| CTGCAGTTATGACTACAAGA+GGG | + | chr7_4:45411246-45411265 | Msa1156840:intron | 40.0% | |
| CTACAAGAGGGAATATCAGT+TGG | + | chr7_4:45411258-45411277 | Msa1156840:CDS | 40.0% | |
| ACAAGAGGGAATATCAGTTG+GGG | + | chr7_4:45411260-45411279 | Msa1156840:CDS | 40.0% | |
| TCGGCAGTTACCTTAAGTTA+GGG | - | chr7_4:45411577-45411596 | None:intergenic | 40.0% | |
| ATCGGCAGTTACCTTAAGTT+AGG | - | chr7_4:45411578-45411597 | None:intergenic | 40.0% | |
| TAGGGTTCATGTATGTCACA+AGG | + | chr7_4:45411974-45411993 | Msa1156840:intron | 40.0% | |
| TAAATCAGCTTCCAGATGGA+AGG | + | chr7_4:45412054-45412073 | Msa1156840:intron | 40.0% | |
| AAATCAGCTTCCAGATGGAA+GGG | + | chr7_4:45412055-45412074 | Msa1156840:intron | 40.0% | |
| AATGAACACCAAGTACCTAC+CGG | - | chr7_4:45412131-45412150 | None:intergenic | 40.0% | |
| TATAAGTTCCTGCAAGAAGG+GGG | - | chr7_4:45412337-45412356 | None:intergenic | 40.0% | |
| CTATAAGTTCCTGCAAGAAG+GGG | - | chr7_4:45412338-45412357 | None:intergenic | 40.0% | |
| !! | AGATGTTGAAGGTGATGGAA+TGG | + | chr7_4:45412356-45412375 | Msa1156840:CDS | 40.0% |
| TGGTGAAAAAGGGTAAACTG+AGG | - | chr7_4:45412536-45412555 | None:intergenic | 40.0% | |
| !! | TTGGTCGAGTTGGTGAAAAA+GGG | - | chr7_4:45412546-45412565 | None:intergenic | 40.0% |
| !! | TTTGGTCGAGTTGGTGAAAA+AGG | - | chr7_4:45412547-45412566 | None:intergenic | 40.0% |
| ACACGGCTCAAGGATTTATT+TGG | - | chr7_4:45412565-45412584 | None:intergenic | 40.0% | |
| ! | TGTTATTAGGGGTGTGCAAA+TGG | + | chr7_4:45412716-45412735 | Msa1156840:intron | 40.0% |
| ! | GTTATTAGGGGTGTGCAAAT+GGG | + | chr7_4:45412717-45412736 | Msa1156840:intron | 40.0% |
| TGGTTTGATACAGTTCAGTC+CGG | + | chr7_4:45412826-45412845 | Msa1156840:intron | 40.0% | |
| ! | ATCTGGTTCAGGACAAAATC+CGG | - | chr7_4:45412878-45412897 | None:intergenic | 40.0% |
| AGGGTAAAAAAACCAGGTCA+GGG | - | chr7_4:45412959-45412978 | None:intergenic | 40.0% | |
| AAGGGTAAAAAAACCAGGTC+AGG | - | chr7_4:45412960-45412979 | None:intergenic | 40.0% | |
| ! | TGGTGTTGAGATGAGGAATA+CGG | - | chr7_4:45413040-45413059 | None:intergenic | 40.0% |
| ! | GAAAAAGTGGTGTTGAGATG+AGG | - | chr7_4:45413047-45413066 | None:intergenic | 40.0% |
| TCAATATCTTGCGATTCCGA+CGG | + | chr7_4:45413180-45413199 | Msa1156840:intron | 40.0% | |
| !! | TCTCTGACTTGGATCAGTAT+TGG | - | chr7_4:45413443-45413462 | None:intergenic | 40.0% |
| ATACTGATCCAAGTCAGAGA+CGG | + | chr7_4:45413443-45413462 | Msa1156840:intron | 40.0% | |
| !! | GTAGGGGTGTTCAAAAAAAC+TGG | - | chr7_4:45413626-45413645 | None:intergenic | 40.0% |
| TATATACTCGAGAGCTGATG+TGG | - | chr7_4:45413661-45413680 | None:intergenic | 40.0% | |
| !! | TTTTGACTACCATGAGAGGA+AGG | - | chr7_4:45413703-45413722 | None:intergenic | 40.0% |
| CCTCTCATGGTAGTCAAAAT+CGG | + | chr7_4:45413704-45413723 | Msa1156840:intron | 40.0% | |
| CTCTCATGGTAGTCAAAATC+GGG | + | chr7_4:45413705-45413724 | Msa1156840:intron | 40.0% | |
| TACGATTAATGTTGCCTTGG+AGG | + | chr7_4:45413754-45413773 | Msa1156840:intron | 40.0% | |
| GAAGCAAGGTAGTCAAAATC+GGG | - | chr7_4:45414174-45414193 | None:intergenic | 40.0% | |
| GGAAGCAAGGTAGTCAAAAT+CGG | - | chr7_4:45414175-45414194 | None:intergenic | 40.0% | |
| CAAAAAATCGGAACGTAACG+TGG | - | chr7_4:45414231-45414250 | None:intergenic | 40.0% | |
| CTGAGCAGCACAAAGAATTA+AGG | - | chr7_4:45414359-45414378 | None:intergenic | 40.0% | |
| TGAGTTCTTATTGGATGCCA+GGG | - | chr7_4:45414540-45414559 | None:intergenic | 40.0% | |
| TATCTGTTGAACATGGTGTC+TGG | + | chr7_4:45415209-45415228 | Msa1156840:intron | 40.0% | |
| !! | CTGGCTCTTCTAAAATCGTT+TGG | + | chr7_4:45415228-45415247 | Msa1156840:intron | 40.0% |
| !!! | GTTTTGAAGGGCAACAAAGA+TGG | + | chr7_4:45415351-45415370 | Msa1156840:CDS | 40.0% |
| TGAACTTGACAAACAGGACA+AGG | + | chr7_4:45415604-45415623 | Msa1156840:intron | 40.0% | |
| ! | CAAGCTCTCAAAGATTTGGT+AGG | - | chr7_4:45415633-45415652 | None:intergenic | 40.0% |
| GAAGCAAGCTCTCAAAGATT+TGG | - | chr7_4:45415637-45415656 | None:intergenic | 40.0% | |
| !! | ACTGACTTCAGTCAGTTTTG+TGG | - | chr7_4:45415782-45415801 | None:intergenic | 40.0% |
| TGTCCTTGCAGGAATAATGA+AGG | + | chr7_4:45416080-45416099 | Msa1156840:CDS | 40.0% | |
| CCACCAAAGACAAACTTTCT+TGG | - | chr7_4:45416389-45416408 | None:intergenic | 40.0% | |
| CCAAGAAAGTTTGTCTTTGG+TGG | + | chr7_4:45416386-45416405 | Msa1156840:intron | 40.0% | |
| ! | GTCTTTGGTGGTTAAAACAC+AGG | + | chr7_4:45416398-45416417 | Msa1156840:intron | 40.0% |
| !!! | CACCAGAGTTTTGGATTAAC+AGG | + | chr7_4:45416424-45416443 | Msa1156840:CDS | 40.0% |
| TCCCTGTTAATCCAAAACTC+TGG | - | chr7_4:45416429-45416448 | None:intergenic | 40.0% | |
| AAGGAATTGCTTGCCTTAGT+AGG | + | chr7_4:45416463-45416482 | Msa1156840:CDS | 40.0% | |
| !! | TGTTAGCCTTGTATAGCTGA+AGG | + | chr7_4:45416632-45416651 | Msa1156840:three_prime_UTR | 40.0% |
| !! | AACTAGCCTTCAGCTATACA+AGG | - | chr7_4:45416641-45416660 | None:intergenic | 40.0% |
| !!! | TAGCTGAAGGCTAGTTTTGT+AGG | + | chr7_4:45416645-45416664 | Msa1156840:three_prime_UTR | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+AGG | - | chr7_4:45417103-45417122 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr7_4:45417103-45417122 | Msa1156840:intron | 40.0% |
| ! | ACGTACTAAAGCACCAAGCA+CGG | - | chr7_4:45408478-45408497 | None:intergenic | 45.0% |
| ! | TGTCCATTTTGTGCTGCGAT+CGG | - | chr7_4:45408525-45408544 | None:intergenic | 45.0% |
| !! | TGTGAAGTGTGGTTTTGCTG+GGG | + | chr7_4:45408756-45408775 | Msa1156840:CDS | 45.0% |
| !! | CTGTTTTTCCTTGTGTGGTG+GGG | + | chr7_4:45408794-45408813 | Msa1156840:CDS | 45.0% |
| !! | GCATACCTTTAGCTCTTGCT+CGG | - | chr7_4:45408851-45408870 | None:intergenic | 45.0% |
| CACCCGCTTAGATTCAGAAA+TGG | - | chr7_4:45408993-45409012 | None:intergenic | 45.0% | |
| ! | GGACATATCTCTAGTTGGTG+TGG | - | chr7_4:45409027-45409046 | None:intergenic | 45.0% |
| ATATATCAAGCTGATGCCGC+AGG | - | chr7_4:45409265-45409284 | None:intergenic | 45.0% | |
| GGATGACATGTGTCATGTGT+GGG | + | chr7_4:45409319-45409338 | Msa1156840:CDS | 45.0% | |
| ! | CTCTGGTACATGCTTTTCCT+CGG | + | chr7_4:45409418-45409437 | Msa1156840:intron | 45.0% |
| ! | TTCTTTGAGGGGTTAAGAGG+TGG | - | chr7_4:45409483-45409502 | None:intergenic | 45.0% |
| ! | CGATTCTTTGAGGGGTTAAG+AGG | - | chr7_4:45409486-45409505 | None:intergenic | 45.0% |
| ! | AGCAAAAGGGAGCACACATT+TGG | - | chr7_4:45409528-45409547 | None:intergenic | 45.0% |
| AACAGTTCCTTGGTTGTCTC+AGG | + | chr7_4:45409993-45410012 | Msa1156840:intron | 45.0% | |
| TATCCCTCTGATCACTACGA+TGG | + | chr7_4:45410093-45410112 | Msa1156840:intron | 45.0% | |
| !! | ACTACGATGGTGCTATTGCT+AGG | + | chr7_4:45410106-45410125 | Msa1156840:intron | 45.0% |
| ! | AAAACCTGATGGGTGTCATC+TGG | + | chr7_4:45410364-45410383 | Msa1156840:intron | 45.0% |
| ! | TGTTTTTCTAGGCCTACGCA+TGG | - | chr7_4:45410432-45410451 | None:intergenic | 45.0% |
| ATCCAGGTTCCAGTTGTTGA+TGG | + | chr7_4:45410890-45410909 | Msa1156840:intron | 45.0% | |
| CCTCTTGTAGTCATAACTGC+AGG | - | chr7_4:45411248-45411267 | None:intergenic | 45.0% | |
| CCTGCAGTTATGACTACAAG+AGG | + | chr7_4:45411245-45411264 | Msa1156840:intron | 45.0% | |
| GGTTCATGTATGTCACAAGG+TGG | + | chr7_4:45411977-45411996 | Msa1156840:intron | 45.0% | |
| ATGAACACCAAGTACCTACC+GGG | - | chr7_4:45412130-45412149 | None:intergenic | 45.0% | |
| GGATATTGACAACCGGATGA+TGG | + | chr7_4:45412410-45412429 | Msa1156840:CDS | 45.0% | |
| ! | TGGAGCATCATACCATCATC+CGG | - | chr7_4:45412425-45412444 | None:intergenic | 45.0% |
| ACAACAACTAACACGGCTCA+AGG | - | chr7_4:45412575-45412594 | None:intergenic | 45.0% | |
| ! | ACCATGAACCAGTACTGAAC+CGG | - | chr7_4:45412848-45412867 | None:intergenic | 45.0% |
| TTCAGGACAAAATCCGGTTC+AGG | - | chr7_4:45412872-45412891 | None:intergenic | 45.0% | |
| ! | CGGGAATCAAAATCTGGTTC+AGG | - | chr7_4:45412889-45412908 | None:intergenic | 45.0% |
| ! | ACGGTTCGGGAATCAAAATC+TGG | - | chr7_4:45412895-45412914 | None:intergenic | 45.0% |
| AAACGGTTCAGGTGGAAAAC+CGG | - | chr7_4:45412931-45412950 | None:intergenic | 45.0% | |
| !! | AATACGGTGCGATAGTGGAT+CGG | - | chr7_4:45413024-45413043 | None:intergenic | 45.0% |
| GTCGTTATCCAGGATGAGAT+CGG | - | chr7_4:45413091-45413110 | None:intergenic | 45.0% | |
| TTGACTGATCGTCGTTATCC+AGG | - | chr7_4:45413101-45413120 | None:intergenic | 45.0% | |
| GGATAACGACGATCAGTCAA+CGG | + | chr7_4:45413101-45413120 | Msa1156840:intron | 45.0% | |
| CAATATCTTGCGATTCCGAC+GGG | + | chr7_4:45413181-45413200 | Msa1156840:intron | 45.0% | |
| !! | CTGACTTGGATCAGTATTGG+AGG | - | chr7_4:45413440-45413459 | None:intergenic | 45.0% |
| AACATTCCTCCTTCCTCTCA+TGG | + | chr7_4:45413691-45413710 | Msa1156840:intron | 45.0% | |
| !!! | CCGATTTTGACTACCATGAG+AGG | - | chr7_4:45413707-45413726 | None:intergenic | 45.0% |
| TACATATAATCCGCAAGGGG+AGG | - | chr7_4:45414147-45414166 | None:intergenic | 45.0% | |
| ! | GCTTGGTAATCCAGGATACA+TGG | - | chr7_4:45414296-45414315 | None:intergenic | 45.0% |
| TGTATCCTGGATTACCAAGC+CGG | + | chr7_4:45414296-45414315 | Msa1156840:CDS | 45.0% | |
| !! | AATTACCGGCTTGGTAATCC+AGG | - | chr7_4:45414304-45414323 | None:intergenic | 45.0% |
| GTGAGTTCTTATTGGATGCC+AGG | - | chr7_4:45414541-45414560 | None:intergenic | 45.0% | |
| CATGTACAAGAGTGGGATGA+CGG | + | chr7_4:45414600-45414619 | Msa1156840:intron | 45.0% | |
| ATGTACAAGAGTGGGATGAC+GGG | + | chr7_4:45414601-45414620 | Msa1156840:intron | 45.0% | |
| GGGCGGATGTATATATGCTT+AGG | - | chr7_4:45414934-45414953 | None:intergenic | 45.0% | |
| !! | GGGCAACAAAGATGGATTGA+AGG | + | chr7_4:45415359-45415378 | Msa1156840:CDS | 45.0% |
| ATTGCTTGCCTTAGTAGGTG+TGG | + | chr7_4:45416468-45416487 | Msa1156840:CDS | 45.0% | |
| GGAACTCAATAAGTCAGGCT+TGG | - | chr7_4:45416494-45416513 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr7_4:45417102-45417121 | Msa1156840:intron | 45.0% |
| !!! | AAGTTTTTTTTTTTTTTTTT+TGG | + | chr7_4:45411669-45411688 | Msa1156840:intron | 5.0% |
| !!! | AGTTTTTTTTTTTTTTTTTT+GGG | + | chr7_4:45411670-45411689 | Msa1156840:intron | 5.0% |
| !! | AGATAAAAATATTAAAAAAA+TGG | - | chr7_4:45415194-45415213 | None:intergenic | 5.0% |
| ! | CTAAAGCACCAAGCACGGTT+GGG | - | chr7_4:45408473-45408492 | None:intergenic | 50.0% |
| ! | ACTAAAGCACCAAGCACGGT+TGG | - | chr7_4:45408474-45408493 | None:intergenic | 50.0% |
| AGTACGTCATACATCTCCGC+CGG | + | chr7_4:45408491-45408510 | Msa1156840:five_prime_UTR | 50.0% | |
| CTACCGATCGCAGCACAAAA+TGG | + | chr7_4:45408519-45408538 | Msa1156840:exon | 50.0% | |
| AACGTCGTCGTTTGCGACAA+CGG | + | chr7_4:45408550-45408569 | Msa1156840:CDS | 50.0% | |
| !! | TTTTTCCTTGTGTGGTGGGG+AGG | + | chr7_4:45408797-45408816 | Msa1156840:CDS | 50.0% |
| GCTTACCGAGCAAGAGCTAA+AGG | + | chr7_4:45408843-45408862 | Msa1156840:CDS | 50.0% | |
| GGGATGACATGTGTCATGTG+TGG | + | chr7_4:45409318-45409337 | Msa1156840:CDS | 50.0% | |
| TCTTGAGGGTTAATCTGCCG+AGG | - | chr7_4:45409438-45409457 | None:intergenic | 50.0% | |
| CAGCAAACCTGAGACAACCA+AGG | - | chr7_4:45410003-45410022 | None:intergenic | 50.0% | |
| !! | GTTGTCTCAGGTTTGCTGAC+TGG | + | chr7_4:45410005-45410024 | Msa1156840:intron | 50.0% |
| !! | GGGTGATGGTGTTACTCATG+TGG | + | chr7_4:45410043-45410062 | Msa1156840:CDS | 50.0% |
| GCACCATCGTAGTGATCAGA+GGG | - | chr7_4:45410099-45410118 | None:intergenic | 50.0% | |
| AGCACCATCGTAGTGATCAG+AGG | - | chr7_4:45410100-45410119 | None:intergenic | 50.0% | |
| TGTACCAGATGACACCCATC+AGG | - | chr7_4:45410371-45410390 | None:intergenic | 50.0% | |
| AGCCATCAACAACTGGAACC+TGG | - | chr7_4:45410895-45410914 | None:intergenic | 50.0% | |
| ACTGGTCACGTACAGAGTTC+AGG | - | chr7_4:45411340-45411359 | None:intergenic | 50.0% | |
| ! | TTTTCACCCCGGTAGGTACT+TGG | + | chr7_4:45412120-45412139 | Msa1156840:intron | 50.0% |
| TGAACACCAAGTACCTACCG+GGG | - | chr7_4:45412129-45412148 | None:intergenic | 50.0% | |
| !! | AGGTGATGGAATGGCTGACA+TGG | + | chr7_4:45412365-45412384 | Msa1156840:CDS | 50.0% |
| AGTTCAGTCCGGTTCAGTAC+TGG | + | chr7_4:45412837-45412856 | Msa1156840:intron | 50.0% | |
| !! | TCCGGTTCAGTACTGGTTCA+TGG | + | chr7_4:45412844-45412863 | Msa1156840:intron | 50.0% |
| CTGGTTCATGGTACCTGAAC+CGG | + | chr7_4:45412856-45412875 | Msa1156840:intron | 50.0% | |
| TCAGGGCAGAAAAACGGTTC+AGG | - | chr7_4:45412942-45412961 | None:intergenic | 50.0% | |
| ACCAGGTCAGGGCAGAAAAA+CGG | - | chr7_4:45412948-45412967 | None:intergenic | 50.0% | |
| GTGGATCGGAGAGTTAGAGA+AGG | - | chr7_4:45413010-45413029 | None:intergenic | 50.0% | |
| TGAGGAATACGGTGCGATAG+TGG | - | chr7_4:45413029-45413048 | None:intergenic | 50.0% | |
| GTTTCTCTCCGATCTCATCC+TGG | + | chr7_4:45413080-45413099 | Msa1156840:intron | 50.0% | |
| AGTAACCACCGTCTCTGACT+TGG | - | chr7_4:45413454-45413473 | None:intergenic | 50.0% | |
| TGACTACCATGAGAGGAAGG+AGG | - | chr7_4:45413700-45413719 | None:intergenic | 50.0% | |
| GGTGTAGTCATGATCCTCCA+AGG | - | chr7_4:45413771-45413790 | None:intergenic | 50.0% | |
| TGTACAAGAGTGGGATGACG+GGG | + | chr7_4:45414602-45414621 | Msa1156840:intron | 50.0% | |
| !! | GGGATGACGGGGAAAAACAA+CGG | + | chr7_4:45414613-45414632 | Msa1156840:intron | 50.0% |
| ! | TCTGCCCCCCATTTTCAGAT+TGG | + | chr7_4:45415296-45415315 | Msa1156840:intron | 50.0% |
| ! | AGGAAGCACATGGTGTACCT+TGG | + | chr7_4:45416051-45416070 | Msa1156840:CDS | 50.0% |
| AAGCACATGGTGTACCTTGG+TGG | + | chr7_4:45416054-45416073 | Msa1156840:CDS | 50.0% | |
| ! | CACAGGATGCACCAGAGTTT+TGG | + | chr7_4:45416415-45416434 | Msa1156840:intron | 50.0% |
| GCTGCGATCGGTAGAAGTTC+CGG | - | chr7_4:45408513-45408532 | None:intergenic | 55.0% | |
| GTCGTTTGCGACAACGGAAC+TGG | + | chr7_4:45408556-45408575 | Msa1156840:CDS | 55.0% | |
| ! | TTGCTTTCTAGGAGGGGGTG+AGG | + | chr7_4:45410983-45411002 | Msa1156840:intron | 55.0% |
| !! | ATTGGGCACCGAAAGGTTCC+AGG | + | chr7_4:45412085-45412104 | Msa1156840:CDS | 55.0% |
| TTCAGGGGCCTGGAACCTTT+CGG | - | chr7_4:45412096-45412115 | None:intergenic | 55.0% | |
| TGAAAAGAGCTTCAGGGGCC+TGG | - | chr7_4:45412106-45412125 | None:intergenic | 55.0% | |
| CGGGGTGAAAAGAGCTTCAG+GGG | - | chr7_4:45412111-45412130 | None:intergenic | 55.0% | |
| CCGGGGTGAAAAGAGCTTCA+GGG | - | chr7_4:45412112-45412131 | None:intergenic | 55.0% | |
| ! | CCCTGAAGCTCTTTTCACCC+CGG | + | chr7_4:45412109-45412128 | Msa1156840:CDS | 55.0% |
| ACCGGGGTGAAAAGAGCTTC+AGG | - | chr7_4:45412113-45412132 | None:intergenic | 55.0% | |
| ! | GAAGCTCTTTTCACCCCGGT+AGG | + | chr7_4:45412113-45412132 | Msa1156840:intron | 55.0% |
| GGGCAGAAAAACGGTTCAGG+TGG | - | chr7_4:45412939-45412958 | None:intergenic | 55.0% | |
| !! | ACCGTTTTTCTGCCCTGACC+TGG | + | chr7_4:45412944-45412963 | Msa1156840:intron | 55.0% |
| CGACGATCAGTCAACGGAGA+CGG | + | chr7_4:45413107-45413126 | Msa1156840:intron | 55.0% | |
| ! | GTGAGAGTGTGAGAGACACG+AGG | - | chr7_4:45413136-45413155 | None:intergenic | 55.0% |
| ! | GACAAGGCTTTGTGAGGCGA+GGG | + | chr7_4:45413241-45413260 | Msa1156840:intron | 55.0% |
| CTGATCCAAGTCAGAGACGG+TGG | + | chr7_4:45413446-45413465 | Msa1156840:intron | 55.0% | |
| TGCGACTTTACCTCCCCTTG+CGG | + | chr7_4:45414134-45414153 | Msa1156840:intron | 55.0% | |
| GAATTGAGGATCCACCACGC+AGG | + | chr7_4:45416031-45416050 | Msa1156840:CDS | 55.0% | |
| TACACCATGTGCTTCCTGCG+TGG | - | chr7_4:45416048-45416067 | None:intergenic | 55.0% | |
| AGGCTTGGCCACACCTACTA+AGG | - | chr7_4:45416479-45416498 | None:intergenic | 55.0% | |
| !! | AAGCACGGTTGGGTTGGTGG+GGG | - | chr7_4:45408463-45408482 | None:intergenic | 60.0% |
| !! | CAAGCACGGTTGGGTTGGTG+GGG | - | chr7_4:45408464-45408483 | None:intergenic | 60.0% |
| !! | CCAAGCACGGTTGGGTTGGT+GGG | - | chr7_4:45408465-45408484 | None:intergenic | 60.0% |
| !! | ACCAAGCACGGTTGGGTTGG+TGG | - | chr7_4:45408466-45408485 | None:intergenic | 60.0% |
| AGCACCAAGCACGGTTGGGT+TGG | - | chr7_4:45408469-45408488 | None:intergenic | 60.0% | |
| GCGATCGGTAGAAGTTCCGG+CGG | - | chr7_4:45408510-45408529 | None:intergenic | 60.0% | |
| ! | ATTGGCCTCCCCACCACACA+AGG | - | chr7_4:45408805-45408824 | None:intergenic | 60.0% |
| GCGAAGGATGTGCAGACCTG+CGG | + | chr7_4:45409246-45409265 | Msa1156840:CDS | 60.0% | |
| !! | AAGGGGGAAGCACCATGCGT+AGG | + | chr7_4:45410417-45410436 | Msa1156840:intron | 60.0% |
| ! | GGCGTTTTCCCCCTTCTTGC+AGG | + | chr7_4:45412326-45412345 | Msa1156840:intron | 60.0% |
| !! | AACAAGCAGTGCCGGCGACA+AGG | + | chr7_4:45413225-45413244 | Msa1156840:intron | 60.0% |
| ! | GCCTCACAAAGCCTTGTCGC+CGG | - | chr7_4:45413239-45413258 | None:intergenic | 60.0% |
| ! | CGACAAGGCTTTGTGAGGCG+AGG | + | chr7_4:45413240-45413259 | Msa1156840:intron | 60.0% |
| ! | AAGGCTTTGTGAGGCGAGGG+AGG | + | chr7_4:45413244-45413263 | Msa1156840:intron | 60.0% |
| !! | GGAGGGAGCACCATGTATCC+TGG | + | chr7_4:45414283-45414302 | Msa1156840:CDS | 60.0% |
| ! | TCCACCACGCAGGAAGCACA+TGG | + | chr7_4:45416041-45416060 | Msa1156840:CDS | 60.0% |
| ACCATGTGCTTCCTGCGTGG+TGG | - | chr7_4:45416045-45416064 | None:intergenic | 60.0% | |
| CTGCAAGGACAGCACCACCA+AGG | - | chr7_4:45416071-45416090 | None:intergenic | 60.0% | |
| !! | CTTGGTGGTGCTGTCCTTGC+AGG | + | chr7_4:45416069-45416088 | Msa1156840:CDS | 60.0% |
| ! | GTTGGTGGGGGGACTCAGTG+TGG | - | chr7_4:45408451-45408470 | None:intergenic | 65.0% |
| !! | AGCACGGTTGGGTTGGTGGG+GGG | - | chr7_4:45408462-45408481 | None:intergenic | 65.0% |
| CCCACCAACCCAACCGTGCT+TGG | + | chr7_4:45408462-45408481 | Msa1156840:five_prime_UTR | 65.0% | |
| GGCACTGCTTGTTCCGTCGC+CGG | - | chr7_4:45413218-45413237 | None:intergenic | 65.0% | |
| GGCGACGGAACAAGCAGTGC+CGG | + | chr7_4:45413217-45413236 | Msa1156840:intron | 65.0% | |
| ! | GCCGGCGACAAGGCTTTGTG+AGG | + | chr7_4:45413235-45413254 | Msa1156840:intron | 65.0% |
| GAGGCGAGGGAGGAGACCAA+TGG | + | chr7_4:45413254-45413273 | Msa1156840:intron | 65.0% | |
| CCGGCGCTGCTTGTTCCCGT+CGG | - | chr7_4:45413199-45413218 | None:intergenic | 70.0% | |
| CCGACGGGAACAAGCAGCGC+CGG | + | chr7_4:45413196-45413215 | Msa1156840:intron | 70.0% | |
| !! | GGAACAAGCAGCGCCGGCGA+CGG | + | chr7_4:45413202-45413221 | Msa1156840:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 45408442 | 45417164 | 45408442 | ID=Msa1156840;Name=Msa1156840 |
| chr7_4 | mRNA | 45408442 | 45417164 | 45408442 | ID=Msa1156840-mRNA-1;Parent=Msa1156840;Name=Msa1156840-mRNA-1;_AED=0.14;_eAED=0.14;_QI=96|1|1|1|0.87|0.82|17|357|389 |
| chr7_4 | exon | 45408442 | 45408579 | 45408442 | ID=Msa1156840-mRNA-1:exon:11805;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45408754 | 45408864 | 45408754 | ID=Msa1156840-mRNA-1:exon:11806;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45409233 | 45409367 | 45409233 | ID=Msa1156840-mRNA-1:exon:11807;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45409444 | 45409515 | 45409444 | ID=Msa1156840-mRNA-1:exon:11808;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45409597 | 45409675 | 45409597 | ID=Msa1156840-mRNA-1:exon:11809;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45410015 | 45410064 | 45410015 | ID=Msa1156840-mRNA-1:exon:11810;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45410896 | 45410999 | 45410896 | ID=Msa1156840-mRNA-1:exon:11811;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45411103 | 45411171 | 45411103 | ID=Msa1156840-mRNA-1:exon:11812;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45411252 | 45411315 | 45411252 | ID=Msa1156840-mRNA-1:exon:11813;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45412062 | 45412130 | 45412062 | ID=Msa1156840-mRNA-1:exon:11814;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45412348 | 45412431 | 45412348 | ID=Msa1156840-mRNA-1:exon:11815;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45414259 | 45414317 | 45414259 | ID=Msa1156840-mRNA-1:exon:11816;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45415314 | 45415380 | 45415314 | ID=Msa1156840-mRNA-1:exon:11817;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45416018 | 45416101 | 45416018 | ID=Msa1156840-mRNA-1:exon:11818;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45416420 | 45416803 | 45416420 | ID=Msa1156840-mRNA-1:exon:11819;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45416836 | 45416848 | 45416836 | ID=Msa1156840-mRNA-1:exon:11820;Parent=Msa1156840-mRNA-1 |
| chr7_4 | exon | 45417124 | 45417164 | 45417124 | ID=Msa1156840-mRNA-1:exon:11821;Parent=Msa1156840-mRNA-1 |
| chr7_4 | five_prime_UTR | 45408442 | 45408537 | 45408442 | ID=Msa1156840-mRNA-1:five_prime_utr;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45408538 | 45408579 | 45408538 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45408754 | 45408864 | 45408754 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45409233 | 45409367 | 45409233 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45409444 | 45409515 | 45409444 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45409597 | 45409675 | 45409597 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45410015 | 45410064 | 45410015 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45410896 | 45410999 | 45410896 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45411103 | 45411171 | 45411103 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45411252 | 45411315 | 45411252 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45412062 | 45412130 | 45412062 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45412348 | 45412431 | 45412348 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45414259 | 45414317 | 45414259 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45415314 | 45415380 | 45415314 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45416018 | 45416101 | 45416018 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | CDS | 45416420 | 45416500 | 45416420 | ID=Msa1156840-mRNA-1:cds;Parent=Msa1156840-mRNA-1 |
| chr7_4 | three_prime_UTR | 45416501 | 45416803 | 45416501 | ID=Msa1156840-mRNA-1:three_prime_utr;Parent=Msa1156840-mRNA-1 |
| chr7_4 | three_prime_UTR | 45416836 | 45416848 | 45416836 | ID=Msa1156840-mRNA-1:three_prime_utr;Parent=Msa1156840-mRNA-1 |
| chr7_4 | three_prime_UTR | 45417124 | 45417164 | 45417124 | ID=Msa1156840-mRNA-1:three_prime_utr;Parent=Msa1156840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
