Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157060 | XP_024625246.1 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 7.32e-151 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157060 | A0A396H380 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 3.50e-151 | 428 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1157060 | Msa1373170 | 0.800427 | 1.448407e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157060 | MtrunA17_Chr7g0250781 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 6.73e-155 | 428 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157060 | AT1G67060.1 | 81.991 | 211 | 37 | 1 | 2 | 212 | 4 | 213 | 9.77e-124 | 350 |
| Msa1157060 | AT1G67060.2 | 84.354 | 147 | 22 | 1 | 66 | 212 | 1 | 146 | 2.52e-83 | 245 |
| Msa1157060 | AT1G67060.3 | 84.354 | 147 | 22 | 1 | 66 | 212 | 1 | 146 | 2.52e-83 | 245 |
Find 46 sgRNAs with CRISPR-Local
Find 586 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATCTTGGTTCATCATTT+TGG | 0.061517 | 7_4:+45843893 | Msa1157060:intron |
| ATATCGACTCTGTTCTATTT+TGG | 0.116444 | 7_4:+45845839 | Msa1157060:three_prime_UTR |
| CCTTGCCCTTGTAATGGTTT+TGG | 0.181287 | 7_4:+45844651 | Msa1157060:CDS |
| CAAAAGCAATGAAGAGTTTC+TGG | 0.208058 | 7_4:-45841424 | None:intergenic |
| ACATTTACAGATTGAGAAAT+TGG | 0.228530 | 7_4:+45845790 | Msa1157060:intron |
| AACACAGTGATGAGCTTAAA+AGG | 0.297704 | 7_4:-45842396 | None:intergenic |
| CCAATAGGTGGAGGGAATTC+AGG | 0.313772 | 7_4:+45843253 | Msa1157060:intron |
| AAATTATTATCAAAATTGAT+AGG | 0.370755 | 7_4:+45846293 | Msa1157060:three_prime_UTR |
| GAATAACATAGCGAAGGATA+TGG | 0.377399 | 7_4:-45844295 | None:intergenic |
| AGACTGTAGCAATGCCAAAC+TGG | 0.379720 | 7_4:+45841375 | Msa1157060:exon |
| ATGATGCTATGGGAGTAATT+TGG | 0.384786 | 7_4:-45845930 | None:intergenic |
| TGGTTGCTTTCTTGCTGCTC+TGG | 0.389334 | 7_4:+45843969 | Msa1157060:CDS |
| GTATCCAAGCTGTTTGTTGC+TGG | 0.390223 | 7_4:+45845812 | Msa1157060:three_prime_UTR |
| CGCTATGTTATTCTCTTCAT+CGG | 0.422285 | 7_4:+45844305 | Msa1157060:CDS |
| TACTGGTTGATCTTGCCTGC+TGG | 0.424141 | 7_4:+45843320 | Msa1157060:CDS |
| GTCTGCCCTTGCCCTTGTAA+TGG | 0.430059 | 7_4:+45844645 | Msa1157060:CDS |
| CAGTTCTTAAGCTCCCAGTT+TGG | 0.464484 | 7_4:-45841389 | None:intergenic |
| GGCTGCAAAGAATGATGCTA+TGG | 0.471853 | 7_4:-45845941 | None:intergenic |
| CTTACTGCAAGGATTGCTGC+TGG | 0.492007 | 7_4:+45843949 | Msa1157060:CDS |
| CCCCACCCAAAACCATTACA+AGG | 0.500731 | 7_4:-45844657 | None:intergenic |
| GACTGTAGCAATGCCAAACT+GGG | 0.512946 | 7_4:+45841376 | Msa1157060:exon |
| ATTGCCTGTTTGCTCACTTG+TGG | 0.516164 | 7_4:+45842441 | Msa1157060:CDS |
| CTGTTTGCTCACTTGTGGCA+AGG | 0.521314 | 7_4:+45842446 | Msa1157060:CDS |
| TATCCAAAAGTGGACACTGC+GGG | 0.526440 | 7_4:+45844119 | Msa1157060:intron |
| GGTTCATGCAAACGAGGGAG+GGG | 0.535060 | 7_4:+45843274 | Msa1157060:CDS |
| CTTGCCACAAGTGAGCAAAC+AGG | 0.537453 | 7_4:-45842445 | None:intergenic |
| CTACAAATATTCTTACTGCA+AGG | 0.548085 | 7_4:+45843938 | Msa1157060:CDS |
| AGGTTCATGCAAACGAGGGA+GGG | 0.551598 | 7_4:+45843273 | Msa1157060:CDS |
| CTTGCCAGCAACAAACAGCT+TGG | 0.561565 | 7_4:-45845816 | None:intergenic |
| ACACTGCGGGGACTCTGTAT+CGG | 0.572546 | 7_4:+45844132 | Msa1157060:CDS |
| CCAAAACCATTACAAGGGCA+AGG | 0.586840 | 7_4:-45844651 | None:intergenic |
| CAGGTTCATGCAAACGAGGG+AGG | 0.605633 | 7_4:+45843272 | Msa1157060:CDS |
| TGAAGAGAATAACATAGCGA+AGG | 0.615134 | 7_4:-45844301 | None:intergenic |
| GGGGTAACACAGACGCGTGG+TGG | 0.619279 | 7_4:+45843293 | Msa1157060:CDS |
| AATTCAGGTTCATGCAAACG+AGG | 0.624880 | 7_4:+45843268 | Msa1157060:CDS |
| GTTTGATGCCAATAGGTGGA+GGG | 0.627009 | 7_4:+45843245 | Msa1157060:intron |
| GCTGCAAAGAATGATGCTAT+GGG | 0.628527 | 7_4:-45845940 | None:intergenic |
| AAAGGTGAGAGAAAGTTGCA+AGG | 0.647876 | 7_4:-45841248 | None:intergenic |
| CAAAACCATTACAAGGGCAA+GGG | 0.650178 | 7_4:-45844650 | None:intergenic |
| ATCCAAAAGTGGACACTGCG+GGG | 0.667397 | 7_4:+45844120 | Msa1157060:intron |
| CCCACCCAAAACCATTACAA+GGG | 0.672104 | 7_4:-45844656 | None:intergenic |
| TGTGGTGATTACAGCTATGG+AGG | 0.679407 | 7_4:+45842358 | Msa1157060:intron |
| GGAGGGGTAACACAGACGCG+TGG | 0.683153 | 7_4:+45843290 | Msa1157060:CDS |
| AGGTACGAGGAGGATGACAA+CGG | 0.703171 | 7_4:-45841459 | None:intergenic |
| ATTCAGGTTCATGCAAACGA+GGG | 0.703449 | 7_4:+45843269 | Msa1157060:CDS |
| TTATCCAAAAGTGGACACTG+CGG | 0.740464 | 7_4:+45844118 | Msa1157060:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTCTGT+TGG | - | chr7_4:45841316-45841335 | None:intergenic | 10.0% |
| !!! | GAAGTTTTTATTTTTTTTAA+TGG | + | chr7_4:45843036-45843055 | Msa1157060:intron | 10.0% |
| !!! | TTTTCAGTTTTAATAAAATA+AGG | - | chr7_4:45843155-45843174 | None:intergenic | 10.0% |
| !!! | ATTTTACAATTAAAATAATC+AGG | - | chr7_4:45843464-45843483 | None:intergenic | 10.0% |
| !! | AAATTATTATCAAAATTGAT+AGG | + | chr7_4:45846293-45846312 | Msa1157060:three_prime_UTR | 10.0% |
| !!! | TTTTTTTTTTTTTTTTCTGT+TGG | - | chr7_4:45841316-45841335 | None:intergenic | 10.0% |
| !!! | GAAGTTTTTATTTTTTTTAA+TGG | + | chr7_4:45843036-45843055 | Msa1157060:intron | 10.0% |
| !!! | TTTTCAGTTTTAATAAAATA+AGG | - | chr7_4:45843155-45843174 | None:intergenic | 10.0% |
| !!! | ATTTTACAATTAAAATAATC+AGG | - | chr7_4:45843464-45843483 | None:intergenic | 10.0% |
| !! | AAATTATTATCAAAATTGAT+AGG | + | chr7_4:45846293-45846312 | Msa1157060:three_prime_UTR | 10.0% |
| !!! | AATTAAAATTTGTTTGAGAT+TGG | + | chr7_4:45841863-45841882 | Msa1157060:intron | 15.0% |
| !! | ATTTAGTATTTATTCTGATT+AGG | - | chr7_4:45842068-45842087 | None:intergenic | 15.0% |
| !!! | CTGTATTTTTAATTAATTTG+TGG | + | chr7_4:45842835-45842854 | Msa1157060:intron | 15.0% |
| !! | ATATTTATAAACCTCATTAT+TGG | - | chr7_4:45843752-45843771 | None:intergenic | 15.0% |
| !! | GATAATATTTAGATTTAGAT+AGG | - | chr7_4:45845456-45845475 | None:intergenic | 15.0% |
| !! | AATATTGCATATTACAATTT+AGG | - | chr7_4:45846169-45846188 | None:intergenic | 15.0% |
| !!! | AATTAAAATTTGTTTGAGAT+TGG | + | chr7_4:45841863-45841882 | Msa1157060:intron | 15.0% |
| !! | ATTTAGTATTTATTCTGATT+AGG | - | chr7_4:45842068-45842087 | None:intergenic | 15.0% |
| !!! | CTGTATTTTTAATTAATTTG+TGG | + | chr7_4:45842835-45842854 | Msa1157060:intron | 15.0% |
| !! | ATATTTATAAACCTCATTAT+TGG | - | chr7_4:45843752-45843771 | None:intergenic | 15.0% |
| !! | GATAATATTTAGATTTAGAT+AGG | - | chr7_4:45845456-45845475 | None:intergenic | 15.0% |
| !! | AATATTGCATATTACAATTT+AGG | - | chr7_4:45846169-45846188 | None:intergenic | 15.0% |
| !! | GAAAAATTGCTTATAAGAAA+AGG | - | chr7_4:45841215-45841234 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTGTTGAGTTTA+AGG | + | chr7_4:45841352-45841371 | Msa1157060:five_prime_UTR | 20.0% |
| !!! | CAATTGAATTTTTCAAAACA+AGG | + | chr7_4:45842135-45842154 | Msa1157060:intron | 20.0% |
| !! | TAGTATATGATAAAAGACTA+AGG | - | chr7_4:45842167-45842186 | None:intergenic | 20.0% |
| !!! | TGATGTAGTTTTTTTGTTTT+TGG | + | chr7_4:45842277-45842296 | Msa1157060:intron | 20.0% |
| !!! | GATGTAGTTTTTTTGTTTTT+GGG | + | chr7_4:45842278-45842297 | Msa1157060:intron | 20.0% |
| !!! | TATAATTCATTTTGATGTCA+AGG | - | chr7_4:45842665-45842684 | None:intergenic | 20.0% |
| !! | TGAATTATATGAACAGATAA+AGG | + | chr7_4:45842676-45842695 | Msa1157060:intron | 20.0% |
| !! | GAATTATATGAACAGATAAA+GGG | + | chr7_4:45842677-45842696 | Msa1157060:intron | 20.0% |
| !! | AATTATATGAACAGATAAAG+GGG | + | chr7_4:45842678-45842697 | Msa1157060:intron | 20.0% |
| !!! | TACAATCTTCTGAAATAAAA+AGG | + | chr7_4:45844165-45844184 | Msa1157060:intron | 20.0% |
| !!! | CTAATTATGATTTGATTTTC+AGG | + | chr7_4:45844433-45844452 | Msa1157060:intron | 20.0% |
| !! | AAAATGAAACGTATAAAAAG+TGG | - | chr7_4:45844500-45844519 | None:intergenic | 20.0% |
| !!! | TATACGTTTCATTTTCAATT+TGG | + | chr7_4:45844505-45844524 | Msa1157060:intron | 20.0% |
| !!! | TAGTAGGCTTTATTTATTAT+AGG | - | chr7_4:45844797-45844816 | None:intergenic | 20.0% |
| !! | AGTGAATTCACAAAATAAAT+AGG | + | chr7_4:45845012-45845031 | Msa1157060:intron | 20.0% |
| !! | ATTCACAAAATAAATAGGAT+AGG | + | chr7_4:45845017-45845036 | Msa1157060:intron | 20.0% |
| !!! | TATAATGTATTCCACTTTTA+GGG | + | chr7_4:45845209-45845228 | Msa1157060:intron | 20.0% |
| !! | CATGAAAGTAATTTGATTAT+TGG | - | chr7_4:45845549-45845568 | None:intergenic | 20.0% |
| !!! | GTGTGTTTTTGATAAAATTA+TGG | - | chr7_4:45845735-45845754 | None:intergenic | 20.0% |
| !!! | TACATTTTTTTTTCAATTGC+TGG | + | chr7_4:45845894-45845913 | Msa1157060:three_prime_UTR | 20.0% |
| !!! | ACATTTTTTTTTCAATTGCT+GGG | + | chr7_4:45845895-45845914 | Msa1157060:three_prime_UTR | 20.0% |
| !! | GAAAAATTGCTTATAAGAAA+AGG | - | chr7_4:45841215-45841234 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTGTTGAGTTTA+AGG | + | chr7_4:45841352-45841371 | Msa1157060:five_prime_UTR | 20.0% |
| !!! | CAATTGAATTTTTCAAAACA+AGG | + | chr7_4:45842135-45842154 | Msa1157060:intron | 20.0% |
| !! | TAGTATATGATAAAAGACTA+AGG | - | chr7_4:45842167-45842186 | None:intergenic | 20.0% |
| !!! | TGATGTAGTTTTTTTGTTTT+TGG | + | chr7_4:45842277-45842296 | Msa1157060:intron | 20.0% |
| !!! | GATGTAGTTTTTTTGTTTTT+GGG | + | chr7_4:45842278-45842297 | Msa1157060:intron | 20.0% |
| !!! | TATAATTCATTTTGATGTCA+AGG | - | chr7_4:45842665-45842684 | None:intergenic | 20.0% |
| !! | TGAATTATATGAACAGATAA+AGG | + | chr7_4:45842676-45842695 | Msa1157060:intron | 20.0% |
| !! | GAATTATATGAACAGATAAA+GGG | + | chr7_4:45842677-45842696 | Msa1157060:intron | 20.0% |
| !! | AATTATATGAACAGATAAAG+GGG | + | chr7_4:45842678-45842697 | Msa1157060:intron | 20.0% |
| !!! | TACAATCTTCTGAAATAAAA+AGG | + | chr7_4:45844165-45844184 | Msa1157060:intron | 20.0% |
| !!! | CTAATTATGATTTGATTTTC+AGG | + | chr7_4:45844433-45844452 | Msa1157060:intron | 20.0% |
| !! | AAAATGAAACGTATAAAAAG+TGG | - | chr7_4:45844500-45844519 | None:intergenic | 20.0% |
| !!! | TATACGTTTCATTTTCAATT+TGG | + | chr7_4:45844505-45844524 | Msa1157060:intron | 20.0% |
| !!! | TAGTAGGCTTTATTTATTAT+AGG | - | chr7_4:45844797-45844816 | None:intergenic | 20.0% |
| !! | AGTGAATTCACAAAATAAAT+AGG | + | chr7_4:45845012-45845031 | Msa1157060:intron | 20.0% |
| !! | ATTCACAAAATAAATAGGAT+AGG | + | chr7_4:45845017-45845036 | Msa1157060:intron | 20.0% |
| !!! | TATAATGTATTCCACTTTTA+GGG | + | chr7_4:45845209-45845228 | Msa1157060:intron | 20.0% |
| !! | CATGAAAGTAATTTGATTAT+TGG | - | chr7_4:45845549-45845568 | None:intergenic | 20.0% |
| !!! | GTGTGTTTTTGATAAAATTA+TGG | - | chr7_4:45845735-45845754 | None:intergenic | 20.0% |
| !!! | TACATTTTTTTTTCAATTGC+TGG | + | chr7_4:45845894-45845913 | Msa1157060:three_prime_UTR | 20.0% |
| !!! | ACATTTTTTTTTCAATTGCT+GGG | + | chr7_4:45845895-45845914 | Msa1157060:three_prime_UTR | 20.0% |
| !! | TTTCTGTTGGTAGATAAAAA+GGG | - | chr7_4:45841303-45841322 | None:intergenic | 25.0% |
| !!! | TTTTCTGTTGGTAGATAAAA+AGG | - | chr7_4:45841304-45841323 | None:intergenic | 25.0% |
| ! | CCTCAACAATAAAGAAAAAT+GGG | - | chr7_4:45841504-45841523 | None:intergenic | 25.0% |
| ! | TCCTCAACAATAAAGAAAAA+TGG | - | chr7_4:45841505-45841524 | None:intergenic | 25.0% |
| ! | TAGAAAAGAGCTTATGAATT+TGG | + | chr7_4:45841636-45841655 | Msa1157060:intron | 25.0% |
| !!! | TGCTCTATTGATTTGTTTTT+TGG | + | chr7_4:45841676-45841695 | Msa1157060:intron | 25.0% |
| ! | CTCATTTGCAATTAAAATCA+AGG | + | chr7_4:45841723-45841742 | Msa1157060:intron | 25.0% |
| ! | TATGATAAAAGACTAAGGTA+AGG | - | chr7_4:45842162-45842181 | None:intergenic | 25.0% |
| ! | TTTATGTGCTACATTGAATT+TGG | + | chr7_4:45842191-45842210 | Msa1157060:intron | 25.0% |
| ! | CTACATCACATAAATATCTA+AGG | - | chr7_4:45842265-45842284 | None:intergenic | 25.0% |
| ! | AAGGTAAAACTATTAAACGT+AGG | + | chr7_4:45842465-45842484 | Msa1157060:intron | 25.0% |
| !!! | AAGTTTTGATTTGACAACTA+GGG | + | chr7_4:45842603-45842622 | Msa1157060:intron | 25.0% |
| ! | ATTATATGAACAGATAAAGG+GGG | + | chr7_4:45842679-45842698 | Msa1157060:intron | 25.0% |
| ! | ATTATGGATTCATAGATTCA+AGG | + | chr7_4:45842896-45842915 | Msa1157060:intron | 25.0% |
| ! | TTAATAAAATAAGGCTGATG+AGG | - | chr7_4:45843146-45843165 | None:intergenic | 25.0% |
| !! | CTCTATTTGGTAAAAAGTAT+CGG | - | chr7_4:45843608-45843627 | None:intergenic | 25.0% |
| ! | TTTATAAACCTCATTATTGG+CGG | - | chr7_4:45843749-45843768 | None:intergenic | 25.0% |
| !!! | AAATCATATGCTTGCTTTTA+AGG | - | chr7_4:45843816-45843835 | None:intergenic | 25.0% |
| !!! | GTATTTACCATTTTTCTGAT+TGG | + | chr7_4:45843862-45843881 | Msa1157060:intron | 25.0% |
| ! | AGAAAAACCAATCAGAAAAA+TGG | - | chr7_4:45843872-45843891 | None:intergenic | 25.0% |
| ! | TTCTTGATCAATGAATATCA+GGG | + | chr7_4:45844222-45844241 | Msa1157060:intron | 25.0% |
| !!! | TTGTTTTTATTGCTGTCATT+TGG | + | chr7_4:45844249-45844268 | Msa1157060:CDS | 25.0% |
| ! | GACAAGTTCAAAATATTTGA+AGG | - | chr7_4:45844357-45844376 | None:intergenic | 25.0% |
| !!! | TGTCATTTCTTTGAAATGTA+TGG | + | chr7_4:45844392-45844411 | Msa1157060:intron | 25.0% |
| !!! | AACAGTTTGTTTTCAGTTTA+TGG | + | chr7_4:45844463-45844482 | Msa1157060:CDS | 25.0% |
| ! | ATTCAACCATATGATATAAG+TGG | - | chr7_4:45844549-45844568 | None:intergenic | 25.0% |
| !! | TCATATGGTTGAATTTTGTA+TGG | + | chr7_4:45844555-45844574 | Msa1157060:intron | 25.0% |
| !!! | ATTTGGTGAGTTTTTTCTTA+TGG | + | chr7_4:45844684-45844703 | Msa1157060:intron | 25.0% |
| !!! | TGGTTTTATAGGATTGAATT+TGG | + | chr7_4:45844751-45844770 | Msa1157060:intron | 25.0% |
| ! | AAACGAGCATAAAAAATAGT+AGG | - | chr7_4:45844813-45844832 | None:intergenic | 25.0% |
| ! | AACATCTGCAAAATTATTGT+AGG | + | chr7_4:45844917-45844936 | Msa1157060:intron | 25.0% |
| ! | TGGATGATTAATAAGGAAAA+AGG | + | chr7_4:45845044-45845063 | Msa1157060:intron | 25.0% |
| ! | ATGCTTATCATCTTTAACAT+TGG | + | chr7_4:45845079-45845098 | Msa1157060:intron | 25.0% |
| ! | AAGTGGAATACATTATAGAA+AGG | - | chr7_4:45845206-45845225 | None:intergenic | 25.0% |
| !!! | CTATAATGTATTCCACTTTT+AGG | + | chr7_4:45845208-45845227 | Msa1157060:intron | 25.0% |
| !!! | ATAATGTATTCCACTTTTAG+GGG | + | chr7_4:45845210-45845229 | Msa1157060:intron | 25.0% |
| ! | TAGATTTAGATAGGAGAAAA+AGG | - | chr7_4:45845447-45845466 | None:intergenic | 25.0% |
| ! | AGTAATTTGATTATTGGAGA+AGG | - | chr7_4:45845543-45845562 | None:intergenic | 25.0% |
| ! | ACATTTACAGATTGAGAAAT+TGG | + | chr7_4:45845790-45845809 | Msa1157060:intron | 25.0% |
| !!! | ATTGCTTTTGTATATGAAAC+TGG | + | chr7_4:45845989-45846008 | Msa1157060:intron | 25.0% |
| !! | GATTTTATCTGTCAATGTAT+TGG | - | chr7_4:45846272-45846291 | None:intergenic | 25.0% |
| !! | TTTCTGTTGGTAGATAAAAA+GGG | - | chr7_4:45841303-45841322 | None:intergenic | 25.0% |
| !!! | TTTTCTGTTGGTAGATAAAA+AGG | - | chr7_4:45841304-45841323 | None:intergenic | 25.0% |
| ! | CCTCAACAATAAAGAAAAAT+GGG | - | chr7_4:45841504-45841523 | None:intergenic | 25.0% |
| ! | TCCTCAACAATAAAGAAAAA+TGG | - | chr7_4:45841505-45841524 | None:intergenic | 25.0% |
| ! | TAGAAAAGAGCTTATGAATT+TGG | + | chr7_4:45841636-45841655 | Msa1157060:intron | 25.0% |
| !!! | TGCTCTATTGATTTGTTTTT+TGG | + | chr7_4:45841676-45841695 | Msa1157060:intron | 25.0% |
| ! | CTCATTTGCAATTAAAATCA+AGG | + | chr7_4:45841723-45841742 | Msa1157060:intron | 25.0% |
| ! | TATGATAAAAGACTAAGGTA+AGG | - | chr7_4:45842162-45842181 | None:intergenic | 25.0% |
| ! | TTTATGTGCTACATTGAATT+TGG | + | chr7_4:45842191-45842210 | Msa1157060:intron | 25.0% |
| ! | CTACATCACATAAATATCTA+AGG | - | chr7_4:45842265-45842284 | None:intergenic | 25.0% |
| ! | AAGGTAAAACTATTAAACGT+AGG | + | chr7_4:45842465-45842484 | Msa1157060:intron | 25.0% |
| !!! | AAGTTTTGATTTGACAACTA+GGG | + | chr7_4:45842603-45842622 | Msa1157060:intron | 25.0% |
| ! | ATTATATGAACAGATAAAGG+GGG | + | chr7_4:45842679-45842698 | Msa1157060:intron | 25.0% |
| ! | ATTATGGATTCATAGATTCA+AGG | + | chr7_4:45842896-45842915 | Msa1157060:intron | 25.0% |
| ! | TTAATAAAATAAGGCTGATG+AGG | - | chr7_4:45843146-45843165 | None:intergenic | 25.0% |
| !! | CTCTATTTGGTAAAAAGTAT+CGG | - | chr7_4:45843608-45843627 | None:intergenic | 25.0% |
| ! | TTTATAAACCTCATTATTGG+CGG | - | chr7_4:45843749-45843768 | None:intergenic | 25.0% |
| !!! | AAATCATATGCTTGCTTTTA+AGG | - | chr7_4:45843816-45843835 | None:intergenic | 25.0% |
| !!! | GTATTTACCATTTTTCTGAT+TGG | + | chr7_4:45843862-45843881 | Msa1157060:intron | 25.0% |
| ! | AGAAAAACCAATCAGAAAAA+TGG | - | chr7_4:45843872-45843891 | None:intergenic | 25.0% |
| ! | TTCTTGATCAATGAATATCA+GGG | + | chr7_4:45844222-45844241 | Msa1157060:intron | 25.0% |
| !!! | TTGTTTTTATTGCTGTCATT+TGG | + | chr7_4:45844249-45844268 | Msa1157060:CDS | 25.0% |
| ! | GACAAGTTCAAAATATTTGA+AGG | - | chr7_4:45844357-45844376 | None:intergenic | 25.0% |
| !!! | TGTCATTTCTTTGAAATGTA+TGG | + | chr7_4:45844392-45844411 | Msa1157060:intron | 25.0% |
| !!! | AACAGTTTGTTTTCAGTTTA+TGG | + | chr7_4:45844463-45844482 | Msa1157060:CDS | 25.0% |
| ! | ATTCAACCATATGATATAAG+TGG | - | chr7_4:45844549-45844568 | None:intergenic | 25.0% |
| !! | TCATATGGTTGAATTTTGTA+TGG | + | chr7_4:45844555-45844574 | Msa1157060:intron | 25.0% |
| !!! | ATTTGGTGAGTTTTTTCTTA+TGG | + | chr7_4:45844684-45844703 | Msa1157060:intron | 25.0% |
| !!! | TGGTTTTATAGGATTGAATT+TGG | + | chr7_4:45844751-45844770 | Msa1157060:intron | 25.0% |
| ! | AAACGAGCATAAAAAATAGT+AGG | - | chr7_4:45844813-45844832 | None:intergenic | 25.0% |
| ! | AACATCTGCAAAATTATTGT+AGG | + | chr7_4:45844917-45844936 | Msa1157060:intron | 25.0% |
| ! | TGGATGATTAATAAGGAAAA+AGG | + | chr7_4:45845044-45845063 | Msa1157060:intron | 25.0% |
| ! | ATGCTTATCATCTTTAACAT+TGG | + | chr7_4:45845079-45845098 | Msa1157060:intron | 25.0% |
| ! | AAGTGGAATACATTATAGAA+AGG | - | chr7_4:45845206-45845225 | None:intergenic | 25.0% |
| !!! | CTATAATGTATTCCACTTTT+AGG | + | chr7_4:45845208-45845227 | Msa1157060:intron | 25.0% |
| !!! | ATAATGTATTCCACTTTTAG+GGG | + | chr7_4:45845210-45845229 | Msa1157060:intron | 25.0% |
| ! | TAGATTTAGATAGGAGAAAA+AGG | - | chr7_4:45845447-45845466 | None:intergenic | 25.0% |
| ! | AGTAATTTGATTATTGGAGA+AGG | - | chr7_4:45845543-45845562 | None:intergenic | 25.0% |
| ! | ACATTTACAGATTGAGAAAT+TGG | + | chr7_4:45845790-45845809 | Msa1157060:intron | 25.0% |
| !!! | ATTGCTTTTGTATATGAAAC+TGG | + | chr7_4:45845989-45846008 | Msa1157060:intron | 25.0% |
| !! | GATTTTATCTGTCAATGTAT+TGG | - | chr7_4:45846272-45846291 | None:intergenic | 25.0% |
| !! | AAACTCTTCATTGCTTTTGT+TGG | + | chr7_4:45841428-45841447 | Msa1157060:CDS | 30.0% |
| !! | CCCATTTTTCTTTATTGTTG+AGG | + | chr7_4:45841501-45841520 | Msa1157060:intron | 30.0% |
| ! | AAACTACGAAGTTTAAGATC+TGG | - | chr7_4:45841829-45841848 | None:intergenic | 30.0% |
| AGTTTGGTAGATAGATCAAT+TGG | + | chr7_4:45842038-45842057 | Msa1157060:intron | 30.0% | |
| GTTTGGTAGATAGATCAATT+GGG | + | chr7_4:45842039-45842058 | Msa1157060:intron | 30.0% | |
| GTTATGCTAATACTTTGTTG+TGG | + | chr7_4:45842340-45842359 | Msa1157060:intron | 30.0% | |
| AGTAAGACTCAAACTTTGAA+AGG | + | chr7_4:45842523-45842542 | Msa1157060:intron | 30.0% | |
| ! | AATAGCTTCAAAAGAGTGTA+AGG | - | chr7_4:45842581-45842600 | None:intergenic | 30.0% |
| !!! | TTACACTCTTTTGAAGCTAT+TGG | + | chr7_4:45842580-45842599 | Msa1157060:intron | 30.0% |
| !!! | GAAGTTTTGATTTGACAACT+AGG | + | chr7_4:45842602-45842621 | Msa1157060:intron | 30.0% |
| AAGATTCTTGCATGTTTACA+AGG | - | chr7_4:45842795-45842814 | None:intergenic | 30.0% | |
| ACTATCCAGCTTACAAATTA+TGG | + | chr7_4:45842880-45842899 | Msa1157060:intron | 30.0% | |
| ! | TGAATCCATAATTTGTAAGC+TGG | - | chr7_4:45842888-45842907 | None:intergenic | 30.0% |
| TAACATGAAGCAGAATGTAT+TGG | - | chr7_4:45843093-45843112 | None:intergenic | 30.0% | |
| GCATGCATTGGAAATAAATA+TGG | - | chr7_4:45843212-45843231 | None:intergenic | 30.0% | |
| ! | ATTGTTAGTTTGATGCCAAT+AGG | + | chr7_4:45843238-45843257 | Msa1157060:intron | 30.0% |
| ATATGCGAACTGAAAACTAT+TGG | - | chr7_4:45843363-45843382 | None:intergenic | 30.0% | |
| ! | TCGCATATTAACTTTGAGTT+AGG | + | chr7_4:45843375-45843394 | Msa1157060:intron | 30.0% |
| ! | CAGATTGAATTTGAAGTGTT+TGG | - | chr7_4:45843557-45843576 | None:intergenic | 30.0% |
| CAGAAGATTTAGTCTCTATT+TGG | - | chr7_4:45843621-45843640 | None:intergenic | 30.0% | |
| !!! | TTCTGAAGCCAATTTTGAAA+TGG | + | chr7_4:45843636-45843655 | Msa1157060:intron | 30.0% |
| !!! | TCTGAAGCCAATTTTGAAAT+GGG | + | chr7_4:45843637-45843656 | Msa1157060:intron | 30.0% |
| ATAAAGCCCCATTTCAAAAT+TGG | - | chr7_4:45843647-45843666 | None:intergenic | 30.0% | |
| TTATAAACCTCATTATTGGC+GGG | - | chr7_4:45843748-45843767 | None:intergenic | 30.0% | |
| TCAATGCTATAAACCTTGAA+TGG | + | chr7_4:45843773-45843792 | Msa1157060:intron | 30.0% | |
| !!! | TATGCTTGCTTTTAAGGTTT+GGG | - | chr7_4:45843810-45843829 | None:intergenic | 30.0% |
| !!! | ATATGCTTGCTTTTAAGGTT+TGG | - | chr7_4:45843811-45843830 | None:intergenic | 30.0% |
| ! | AGATCTTGGTTCATCATTTT+GGG | + | chr7_4:45843894-45843913 | Msa1157060:intron | 30.0% |
| CTACAAATATTCTTACTGCA+AGG | + | chr7_4:45843938-45843957 | Msa1157060:CDS | 30.0% | |
| AACATACCTTTATCCAAAAG+TGG | + | chr7_4:45844109-45844128 | Msa1157060:intron | 30.0% | |
| CTTCTTGATCAATGAATATC+AGG | + | chr7_4:45844221-45844240 | Msa1157060:intron | 30.0% | |
| !! | AAATATTTTGAACTTGTCCC+TGG | + | chr7_4:45844359-45844378 | Msa1157060:intron | 30.0% |
| TTGACACCACTTATATCATA+TGG | + | chr7_4:45844540-45844559 | Msa1157060:intron | 30.0% | |
| ! | TCGATACAAAAAAGTCCTTT+TGG | + | chr7_4:45844716-45844735 | Msa1157060:intron | 30.0% |
| GAATTACCCACTTTCTTATT+TGG | + | chr7_4:45844967-45844986 | Msa1157060:intron | 30.0% | |
| AAATAAATAGGATAGGACAG+TGG | + | chr7_4:45845024-45845043 | Msa1157060:intron | 30.0% | |
| AGACGAAGAAAATACGATAA+CGG | + | chr7_4:45845102-45845121 | Msa1157060:intron | 30.0% | |
| AAATCTTTCCATAACCACTT+GGG | + | chr7_4:45845334-45845353 | Msa1157060:intron | 30.0% | |
| ATTGATCACAGATAACCATT+CGG | + | chr7_4:45845371-45845390 | Msa1157060:intron | 30.0% | |
| TTTACATTCTTTACACCGAA+TGG | - | chr7_4:45845389-45845408 | None:intergenic | 30.0% | |
| !! | ATTCGGTGTAAAGAATGTAA+AGG | + | chr7_4:45845388-45845407 | Msa1157060:intron | 30.0% |
| ! | TTTTCAGACTACAAATGTCA+AGG | - | chr7_4:45845414-45845433 | None:intergenic | 30.0% |
| TATTATCACATTATGCACAC+TGG | + | chr7_4:45845469-45845488 | Msa1157060:intron | 30.0% | |
| AAAAGAGAAAATTGAGCTCT+CGG | - | chr7_4:45845576-45845595 | None:intergenic | 30.0% | |
| AACTCGTCATCAATAATAAC+TGG | - | chr7_4:45845654-45845673 | None:intergenic | 30.0% | |
| !!! | ATATCGACTCTGTTCTATTT+TGG | + | chr7_4:45845839-45845858 | Msa1157060:three_prime_UTR | 30.0% |
| ! | ATTCTTTGCAGCCTATATTT+TGG | + | chr7_4:45845951-45845970 | Msa1157060:intron | 30.0% |
| ! | TTCTTTGCAGCCTATATTTT+GGG | + | chr7_4:45845952-45845971 | Msa1157060:intron | 30.0% |
| GTTATTGAGAAAAAAGAGAC+AGG | + | chr7_4:45846124-45846143 | Msa1157060:intron | 30.0% | |
| ! | GCAATGATGTATTGATATGT+CGG | + | chr7_4:45846208-45846227 | Msa1157060:intron | 30.0% |
| !! | AAACTCTTCATTGCTTTTGT+TGG | + | chr7_4:45841428-45841447 | Msa1157060:CDS | 30.0% |
| !! | CCCATTTTTCTTTATTGTTG+AGG | + | chr7_4:45841501-45841520 | Msa1157060:intron | 30.0% |
| ! | AAACTACGAAGTTTAAGATC+TGG | - | chr7_4:45841829-45841848 | None:intergenic | 30.0% |
| AGTTTGGTAGATAGATCAAT+TGG | + | chr7_4:45842038-45842057 | Msa1157060:intron | 30.0% | |
| GTTTGGTAGATAGATCAATT+GGG | + | chr7_4:45842039-45842058 | Msa1157060:intron | 30.0% | |
| GTTATGCTAATACTTTGTTG+TGG | + | chr7_4:45842340-45842359 | Msa1157060:intron | 30.0% | |
| AGTAAGACTCAAACTTTGAA+AGG | + | chr7_4:45842523-45842542 | Msa1157060:intron | 30.0% | |
| ! | AATAGCTTCAAAAGAGTGTA+AGG | - | chr7_4:45842581-45842600 | None:intergenic | 30.0% |
| !!! | TTACACTCTTTTGAAGCTAT+TGG | + | chr7_4:45842580-45842599 | Msa1157060:intron | 30.0% |
| !!! | GAAGTTTTGATTTGACAACT+AGG | + | chr7_4:45842602-45842621 | Msa1157060:intron | 30.0% |
| AAGATTCTTGCATGTTTACA+AGG | - | chr7_4:45842795-45842814 | None:intergenic | 30.0% | |
| ACTATCCAGCTTACAAATTA+TGG | + | chr7_4:45842880-45842899 | Msa1157060:intron | 30.0% | |
| ! | TGAATCCATAATTTGTAAGC+TGG | - | chr7_4:45842888-45842907 | None:intergenic | 30.0% |
| TAACATGAAGCAGAATGTAT+TGG | - | chr7_4:45843093-45843112 | None:intergenic | 30.0% | |
| GCATGCATTGGAAATAAATA+TGG | - | chr7_4:45843212-45843231 | None:intergenic | 30.0% | |
| ! | ATTGTTAGTTTGATGCCAAT+AGG | + | chr7_4:45843238-45843257 | Msa1157060:intron | 30.0% |
| ATATGCGAACTGAAAACTAT+TGG | - | chr7_4:45843363-45843382 | None:intergenic | 30.0% | |
| ! | TCGCATATTAACTTTGAGTT+AGG | + | chr7_4:45843375-45843394 | Msa1157060:intron | 30.0% |
| ! | CAGATTGAATTTGAAGTGTT+TGG | - | chr7_4:45843557-45843576 | None:intergenic | 30.0% |
| CAGAAGATTTAGTCTCTATT+TGG | - | chr7_4:45843621-45843640 | None:intergenic | 30.0% | |
| !!! | TTCTGAAGCCAATTTTGAAA+TGG | + | chr7_4:45843636-45843655 | Msa1157060:intron | 30.0% |
| !!! | TCTGAAGCCAATTTTGAAAT+GGG | + | chr7_4:45843637-45843656 | Msa1157060:intron | 30.0% |
| ATAAAGCCCCATTTCAAAAT+TGG | - | chr7_4:45843647-45843666 | None:intergenic | 30.0% | |
| TTATAAACCTCATTATTGGC+GGG | - | chr7_4:45843748-45843767 | None:intergenic | 30.0% | |
| TCAATGCTATAAACCTTGAA+TGG | + | chr7_4:45843773-45843792 | Msa1157060:intron | 30.0% | |
| !!! | TATGCTTGCTTTTAAGGTTT+GGG | - | chr7_4:45843810-45843829 | None:intergenic | 30.0% |
| !!! | ATATGCTTGCTTTTAAGGTT+TGG | - | chr7_4:45843811-45843830 | None:intergenic | 30.0% |
| ! | AGATCTTGGTTCATCATTTT+GGG | + | chr7_4:45843894-45843913 | Msa1157060:intron | 30.0% |
| CTACAAATATTCTTACTGCA+AGG | + | chr7_4:45843938-45843957 | Msa1157060:CDS | 30.0% | |
| AACATACCTTTATCCAAAAG+TGG | + | chr7_4:45844109-45844128 | Msa1157060:intron | 30.0% | |
| CTTCTTGATCAATGAATATC+AGG | + | chr7_4:45844221-45844240 | Msa1157060:intron | 30.0% | |
| !! | AAATATTTTGAACTTGTCCC+TGG | + | chr7_4:45844359-45844378 | Msa1157060:intron | 30.0% |
| TTGACACCACTTATATCATA+TGG | + | chr7_4:45844540-45844559 | Msa1157060:intron | 30.0% | |
| ! | TCGATACAAAAAAGTCCTTT+TGG | + | chr7_4:45844716-45844735 | Msa1157060:intron | 30.0% |
| GAATTACCCACTTTCTTATT+TGG | + | chr7_4:45844967-45844986 | Msa1157060:intron | 30.0% | |
| AAATAAATAGGATAGGACAG+TGG | + | chr7_4:45845024-45845043 | Msa1157060:intron | 30.0% | |
| AGACGAAGAAAATACGATAA+CGG | + | chr7_4:45845102-45845121 | Msa1157060:intron | 30.0% | |
| AAATCTTTCCATAACCACTT+GGG | + | chr7_4:45845334-45845353 | Msa1157060:intron | 30.0% | |
| ATTGATCACAGATAACCATT+CGG | + | chr7_4:45845371-45845390 | Msa1157060:intron | 30.0% | |
| TTTACATTCTTTACACCGAA+TGG | - | chr7_4:45845389-45845408 | None:intergenic | 30.0% | |
| !! | ATTCGGTGTAAAGAATGTAA+AGG | + | chr7_4:45845388-45845407 | Msa1157060:intron | 30.0% |
| ! | TTTTCAGACTACAAATGTCA+AGG | - | chr7_4:45845414-45845433 | None:intergenic | 30.0% |
| TATTATCACATTATGCACAC+TGG | + | chr7_4:45845469-45845488 | Msa1157060:intron | 30.0% | |
| AAAAGAGAAAATTGAGCTCT+CGG | - | chr7_4:45845576-45845595 | None:intergenic | 30.0% | |
| AACTCGTCATCAATAATAAC+TGG | - | chr7_4:45845654-45845673 | None:intergenic | 30.0% | |
| !!! | ATATCGACTCTGTTCTATTT+TGG | + | chr7_4:45845839-45845858 | Msa1157060:three_prime_UTR | 30.0% |
| ! | ATTCTTTGCAGCCTATATTT+TGG | + | chr7_4:45845951-45845970 | Msa1157060:intron | 30.0% |
| ! | TTCTTTGCAGCCTATATTTT+GGG | + | chr7_4:45845952-45845971 | Msa1157060:intron | 30.0% |
| GTTATTGAGAAAAAAGAGAC+AGG | + | chr7_4:45846124-45846143 | Msa1157060:intron | 30.0% | |
| ! | GCAATGATGTATTGATATGT+CGG | + | chr7_4:45846208-45846227 | Msa1157060:intron | 30.0% |
| !!! | TAAAAAGGGAGCGGTTTTTT+TGG | - | chr7_4:45841289-45841308 | None:intergenic | 35.0% |
| CAAAAGCAATGAAGAGTTTC+TGG | - | chr7_4:45841427-45841446 | None:intergenic | 35.0% | |
| TTAGTGATTGCATGCTCATA+TGG | + | chr7_4:45841788-45841807 | Msa1157060:intron | 35.0% | |
| ! | AGTCACAACTAATCTGAGAT+TGG | - | chr7_4:45842011-45842030 | None:intergenic | 35.0% |
| ! | AATCTCAGATTAGTTGTGAC+TGG | + | chr7_4:45842010-45842029 | Msa1157060:intron | 35.0% |
| ! | GGATTGTTGTTAAAACAGTG+AGG | + | chr7_4:45842212-45842231 | Msa1157060:intron | 35.0% |
| TGTTGTTAAAACAGTGAGGT+TGG | + | chr7_4:45842216-45842235 | Msa1157060:intron | 35.0% | |
| AACACAGTGATGAGCTTAAA+AGG | - | chr7_4:45842399-45842418 | None:intergenic | 35.0% | |
| ! | AGACTCAAACTTTGAAAGGT+AGG | + | chr7_4:45842527-45842546 | Msa1157060:intron | 35.0% |
| ! | GACTCAAACTTTGAAAGGTA+GGG | + | chr7_4:45842528-45842547 | Msa1157060:intron | 35.0% |
| ! | ACTCAAACTTTGAAAGGTAG+GGG | + | chr7_4:45842529-45842548 | Msa1157060:intron | 35.0% |
| AGGGGTTATAGAACTATTCT+TGG | + | chr7_4:45842547-45842566 | Msa1157060:intron | 35.0% | |
| AAGGGGGAAAAACACAAAAA+AGG | + | chr7_4:45842695-45842714 | Msa1157060:intron | 35.0% | |
| TACTGTCATGGAATACAAAC+AGG | - | chr7_4:45842723-45842742 | None:intergenic | 35.0% | |
| AAGAACTTGTAGTACTGTCA+TGG | - | chr7_4:45842735-45842754 | None:intergenic | 35.0% | |
| ! | CATAGTTCCTAAGAGTATGA+AGG | - | chr7_4:45842772-45842791 | None:intergenic | 35.0% |
| TGCTTCATGTTAGCATTATG+TGG | + | chr7_4:45843101-45843120 | Msa1157060:intron | 35.0% | |
| AACAATGATTCAGCATGCAT+TGG | - | chr7_4:45843224-45843243 | None:intergenic | 35.0% | |
| AAAAATGCATTACATCCAGC+AGG | - | chr7_4:45843338-45843357 | None:intergenic | 35.0% | |
| TCGGATAAGTTAGCAGATAA+AGG | - | chr7_4:45843589-45843608 | None:intergenic | 35.0% | |
| !!! | CTGAAGCCAATTTTGAAATG+GGG | + | chr7_4:45843638-45843657 | Msa1157060:intron | 35.0% |
| !! | GTGGTGTTGTTAGTATCAAA+AGG | - | chr7_4:45843677-45843696 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTTCTCCAGATCT+TGG | + | chr7_4:45843880-45843899 | Msa1157060:intron | 35.0% |
| CAAAATGATGAACCAAGATC+TGG | - | chr7_4:45843895-45843914 | None:intergenic | 35.0% | |
| ! | CAGATCTTGGTTCATCATTT+TGG | + | chr7_4:45843893-45843912 | Msa1157060:intron | 35.0% |
| ! | GATCTTGGTTCATCATTTTG+GGG | + | chr7_4:45843895-45843914 | Msa1157060:intron | 35.0% |
| TATGTTAGCGAGACAGAAAA+CGG | - | chr7_4:45844095-45844114 | None:intergenic | 35.0% | |
| AAAGGAAAGACGATAGCATT+AGG | + | chr7_4:45844183-45844202 | Msa1157060:intron | 35.0% | |
| AAGGAAAGACGATAGCATTA+GGG | + | chr7_4:45844184-45844203 | Msa1157060:intron | 35.0% | |
| GAATAACATAGCGAAGGATA+TGG | - | chr7_4:45844298-45844317 | None:intergenic | 35.0% | |
| TGAAGAGAATAACATAGCGA+AGG | - | chr7_4:45844304-45844323 | None:intergenic | 35.0% | |
| CGCTATGTTATTCTCTTCAT+CGG | + | chr7_4:45844305-45844324 | Msa1157060:CDS | 35.0% | |
| TTTGAAGGAAACATGTGAAG+AGG | - | chr7_4:45844342-45844361 | None:intergenic | 35.0% | |
| AATGACACAAATACCAACCA+GGG | - | chr7_4:45844379-45844398 | None:intergenic | 35.0% | |
| AAATGACACAAATACCAACC+AGG | - | chr7_4:45844380-45844399 | None:intergenic | 35.0% | |
| CCTATAAAACCAGTAACTGT+TGG | - | chr7_4:45844743-45844762 | None:intergenic | 35.0% | |
| !!! | CCAACAGTTACTGGTTTTAT+AGG | + | chr7_4:45844740-45844759 | Msa1157060:intron | 35.0% |
| ! | TTACCCACTTTCTTATTTGG+TGG | + | chr7_4:45844970-45844989 | Msa1157060:intron | 35.0% |
| ! | TACCCACTTTCTTATTTGGT+GGG | + | chr7_4:45844971-45844990 | Msa1157060:intron | 35.0% |
| TTCCCACCAAATAAGAAAGT+GGG | - | chr7_4:45844976-45844995 | None:intergenic | 35.0% | |
| AGGACAGTGGATGATTAATA+AGG | + | chr7_4:45845037-45845056 | Msa1157060:intron | 35.0% | |
| AACGGTAATAGTATAGCCAT+AGG | + | chr7_4:45845120-45845139 | Msa1157060:intron | 35.0% | |
| ACGGTAATAGTATAGCCATA+GGG | + | chr7_4:45845121-45845140 | Msa1157060:intron | 35.0% | |
| ATGATAATATGACCAGTCCA+AGG | - | chr7_4:45845272-45845291 | None:intergenic | 35.0% | |
| CAAATCTTTCCATAACCACT+TGG | + | chr7_4:45845333-45845352 | Msa1157060:intron | 35.0% | |
| ! | ATTTTCAACCCAAGTGGTTA+TGG | - | chr7_4:45845345-45845364 | None:intergenic | 35.0% |
| ATGATGCTATGGGAGTAATT+TGG | - | chr7_4:45845933-45845952 | None:intergenic | 35.0% | |
| TTGAGAAAAAAGAGACAGGT+AGG | + | chr7_4:45846128-45846147 | Msa1157060:intron | 35.0% | |
| TGAGAAAAAAGAGACAGGTA+GGG | + | chr7_4:45846129-45846148 | Msa1157060:intron | 35.0% | |
| TATTGATATGTCGGAGAAGT+AGG | + | chr7_4:45846217-45846236 | Msa1157060:intron | 35.0% | |
| !!! | TAAAAAGGGAGCGGTTTTTT+TGG | - | chr7_4:45841289-45841308 | None:intergenic | 35.0% |
| CAAAAGCAATGAAGAGTTTC+TGG | - | chr7_4:45841427-45841446 | None:intergenic | 35.0% | |
| TTAGTGATTGCATGCTCATA+TGG | + | chr7_4:45841788-45841807 | Msa1157060:intron | 35.0% | |
| ! | AGTCACAACTAATCTGAGAT+TGG | - | chr7_4:45842011-45842030 | None:intergenic | 35.0% |
| ! | AATCTCAGATTAGTTGTGAC+TGG | + | chr7_4:45842010-45842029 | Msa1157060:intron | 35.0% |
| ! | GGATTGTTGTTAAAACAGTG+AGG | + | chr7_4:45842212-45842231 | Msa1157060:intron | 35.0% |
| TGTTGTTAAAACAGTGAGGT+TGG | + | chr7_4:45842216-45842235 | Msa1157060:intron | 35.0% | |
| AACACAGTGATGAGCTTAAA+AGG | - | chr7_4:45842399-45842418 | None:intergenic | 35.0% | |
| ! | AGACTCAAACTTTGAAAGGT+AGG | + | chr7_4:45842527-45842546 | Msa1157060:intron | 35.0% |
| ! | GACTCAAACTTTGAAAGGTA+GGG | + | chr7_4:45842528-45842547 | Msa1157060:intron | 35.0% |
| ! | ACTCAAACTTTGAAAGGTAG+GGG | + | chr7_4:45842529-45842548 | Msa1157060:intron | 35.0% |
| AGGGGTTATAGAACTATTCT+TGG | + | chr7_4:45842547-45842566 | Msa1157060:intron | 35.0% | |
| AAGGGGGAAAAACACAAAAA+AGG | + | chr7_4:45842695-45842714 | Msa1157060:intron | 35.0% | |
| TACTGTCATGGAATACAAAC+AGG | - | chr7_4:45842723-45842742 | None:intergenic | 35.0% | |
| AAGAACTTGTAGTACTGTCA+TGG | - | chr7_4:45842735-45842754 | None:intergenic | 35.0% | |
| ! | CATAGTTCCTAAGAGTATGA+AGG | - | chr7_4:45842772-45842791 | None:intergenic | 35.0% |
| TGCTTCATGTTAGCATTATG+TGG | + | chr7_4:45843101-45843120 | Msa1157060:intron | 35.0% | |
| AACAATGATTCAGCATGCAT+TGG | - | chr7_4:45843224-45843243 | None:intergenic | 35.0% | |
| AAAAATGCATTACATCCAGC+AGG | - | chr7_4:45843338-45843357 | None:intergenic | 35.0% | |
| TCGGATAAGTTAGCAGATAA+AGG | - | chr7_4:45843589-45843608 | None:intergenic | 35.0% | |
| !!! | CTGAAGCCAATTTTGAAATG+GGG | + | chr7_4:45843638-45843657 | Msa1157060:intron | 35.0% |
| !! | GTGGTGTTGTTAGTATCAAA+AGG | - | chr7_4:45843677-45843696 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTTCTCCAGATCT+TGG | + | chr7_4:45843880-45843899 | Msa1157060:intron | 35.0% |
| CAAAATGATGAACCAAGATC+TGG | - | chr7_4:45843895-45843914 | None:intergenic | 35.0% | |
| ! | CAGATCTTGGTTCATCATTT+TGG | + | chr7_4:45843893-45843912 | Msa1157060:intron | 35.0% |
| ! | GATCTTGGTTCATCATTTTG+GGG | + | chr7_4:45843895-45843914 | Msa1157060:intron | 35.0% |
| TATGTTAGCGAGACAGAAAA+CGG | - | chr7_4:45844095-45844114 | None:intergenic | 35.0% | |
| AAAGGAAAGACGATAGCATT+AGG | + | chr7_4:45844183-45844202 | Msa1157060:intron | 35.0% | |
| AAGGAAAGACGATAGCATTA+GGG | + | chr7_4:45844184-45844203 | Msa1157060:intron | 35.0% | |
| GAATAACATAGCGAAGGATA+TGG | - | chr7_4:45844298-45844317 | None:intergenic | 35.0% | |
| TGAAGAGAATAACATAGCGA+AGG | - | chr7_4:45844304-45844323 | None:intergenic | 35.0% | |
| CGCTATGTTATTCTCTTCAT+CGG | + | chr7_4:45844305-45844324 | Msa1157060:CDS | 35.0% | |
| TTTGAAGGAAACATGTGAAG+AGG | - | chr7_4:45844342-45844361 | None:intergenic | 35.0% | |
| AATGACACAAATACCAACCA+GGG | - | chr7_4:45844379-45844398 | None:intergenic | 35.0% | |
| AAATGACACAAATACCAACC+AGG | - | chr7_4:45844380-45844399 | None:intergenic | 35.0% | |
| CCTATAAAACCAGTAACTGT+TGG | - | chr7_4:45844743-45844762 | None:intergenic | 35.0% | |
| !!! | CCAACAGTTACTGGTTTTAT+AGG | + | chr7_4:45844740-45844759 | Msa1157060:intron | 35.0% |
| ! | TTACCCACTTTCTTATTTGG+TGG | + | chr7_4:45844970-45844989 | Msa1157060:intron | 35.0% |
| ! | TACCCACTTTCTTATTTGGT+GGG | + | chr7_4:45844971-45844990 | Msa1157060:intron | 35.0% |
| TTCCCACCAAATAAGAAAGT+GGG | - | chr7_4:45844976-45844995 | None:intergenic | 35.0% | |
| AGGACAGTGGATGATTAATA+AGG | + | chr7_4:45845037-45845056 | Msa1157060:intron | 35.0% | |
| AACGGTAATAGTATAGCCAT+AGG | + | chr7_4:45845120-45845139 | Msa1157060:intron | 35.0% | |
| ACGGTAATAGTATAGCCATA+GGG | + | chr7_4:45845121-45845140 | Msa1157060:intron | 35.0% | |
| ATGATAATATGACCAGTCCA+AGG | - | chr7_4:45845272-45845291 | None:intergenic | 35.0% | |
| CAAATCTTTCCATAACCACT+TGG | + | chr7_4:45845333-45845352 | Msa1157060:intron | 35.0% | |
| ! | ATTTTCAACCCAAGTGGTTA+TGG | - | chr7_4:45845345-45845364 | None:intergenic | 35.0% |
| ATGATGCTATGGGAGTAATT+TGG | - | chr7_4:45845933-45845952 | None:intergenic | 35.0% | |
| TTGAGAAAAAAGAGACAGGT+AGG | + | chr7_4:45846128-45846147 | Msa1157060:intron | 35.0% | |
| TGAGAAAAAAGAGACAGGTA+GGG | + | chr7_4:45846129-45846148 | Msa1157060:intron | 35.0% | |
| TATTGATATGTCGGAGAAGT+AGG | + | chr7_4:45846217-45846236 | Msa1157060:intron | 35.0% | |
| AAAGGTGAGAGAAAGTTGCA+AGG | - | chr7_4:45841251-45841270 | None:intergenic | 40.0% | |
| !!! | AGCGGTTTTTTTGGTTTAGG+GGG | - | chr7_4:45841280-45841299 | None:intergenic | 40.0% |
| !!! | GAGCGGTTTTTTTGGTTTAG+GGG | - | chr7_4:45841281-45841300 | None:intergenic | 40.0% |
| !!! | GGAGCGGTTTTTTTGGTTTA+GGG | - | chr7_4:45841282-45841301 | None:intergenic | 40.0% |
| ! | GTTGGTAGATAAAAAGGGAG+CGG | - | chr7_4:45841298-45841317 | None:intergenic | 40.0% |
| CATGCTCATATGGTCAAGAT+CGG | + | chr7_4:45841798-45841817 | Msa1157060:intron | 40.0% | |
| GTTGTGACTGGATCAAAGTT+TGG | + | chr7_4:45842022-45842041 | Msa1157060:intron | 40.0% | |
| GTTGTTGAGTTCACACATTC+AGG | - | chr7_4:45842095-45842114 | None:intergenic | 40.0% | |
| AATGTGTGAACTCAACAACC+AGG | + | chr7_4:45842096-45842115 | Msa1157060:intron | 40.0% | |
| TGTCAAATGTGAAGTCAACC+TGG | - | chr7_4:45842117-45842136 | None:intergenic | 40.0% | |
| TACAATGTCATGTGTCTCAG+TGG | + | chr7_4:45842301-45842320 | Msa1157060:intron | 40.0% | |
| TGTTGTGGTGATTACAGCTA+TGG | + | chr7_4:45842355-45842374 | Msa1157060:intron | 40.0% | |
| ! | TTGATTTGACAACTAGGGAC+AGG | + | chr7_4:45842608-45842627 | Msa1157060:intron | 40.0% |
| TGTCTTGCCTTCATACTCTT+AGG | + | chr7_4:45842762-45842781 | Msa1157060:intron | 40.0% | |
| ! | CACTGATGCATTTGGAATTC+AGG | - | chr7_4:45842997-45843016 | None:intergenic | 40.0% |
| ! | ATTATGTGGTTTTCTGCTGC+TGG | + | chr7_4:45843115-45843134 | Msa1157060:intron | 40.0% |
| ! | GTTAGTTTGATGCCAATAGG+TGG | + | chr7_4:45843241-45843260 | Msa1157060:intron | 40.0% |
| ! | AATTCAGGTTCATGCAAACG+AGG | + | chr7_4:45843268-45843287 | Msa1157060:CDS | 40.0% |
| ! | ATTCAGGTTCATGCAAACGA+GGG | + | chr7_4:45843269-45843288 | Msa1157060:CDS | 40.0% |
| !! | TGGTTCATCATTTTGGGGAA+TGG | + | chr7_4:45843900-45843919 | Msa1157060:CDS | 40.0% |
| ATGTTAGCGAGACAGAAAAC+GGG | - | chr7_4:45844094-45844113 | None:intergenic | 40.0% | |
| !! | CAGTGTCCACTTTTGGATAA+AGG | - | chr7_4:45844118-45844137 | None:intergenic | 40.0% |
| TTATCCAAAAGTGGACACTG+CGG | + | chr7_4:45844118-45844137 | Msa1157060:intron | 40.0% | |
| ! | ATTTTGAACTTGTCCCTGGT+TGG | + | chr7_4:45844363-45844382 | Msa1157060:intron | 40.0% |
| CAAAACCATTACAAGGGCAA+GGG | - | chr7_4:45844653-45844672 | None:intergenic | 40.0% | |
| ! | CTTGCCCTTGTAATGGTTTT+GGG | + | chr7_4:45844652-45844671 | Msa1157060:CDS | 40.0% |
| CTTCCCACCAAATAAGAAAG+TGG | - | chr7_4:45844977-45844996 | None:intergenic | 40.0% | |
| ! | TTCTTATTTGGTGGGAAGAG+AGG | + | chr7_4:45844979-45844998 | Msa1157060:intron | 40.0% |
| ! | TCTTATTTGGTGGGAAGAGA+GGG | + | chr7_4:45844980-45844999 | Msa1157060:intron | 40.0% |
| CGGTAATAGTATAGCCATAG+GGG | + | chr7_4:45845122-45845141 | Msa1157060:intron | 40.0% | |
| GGTAATAGTATAGCCATAGG+GGG | + | chr7_4:45845123-45845142 | Msa1157060:intron | 40.0% | |
| CGATATCATTCCCCTAAAAG+TGG | - | chr7_4:45845223-45845242 | None:intergenic | 40.0% | |
| !! | GGACTGGTCATATTATCATG+AGG | + | chr7_4:45845273-45845292 | Msa1157060:intron | 40.0% |
| ! | CAAGACATTTTCAACCCAAG+TGG | - | chr7_4:45845351-45845370 | None:intergenic | 40.0% |
| TTGGAGAAGGCGATTATGAT+GGG | - | chr7_4:45845530-45845549 | None:intergenic | 40.0% | |
| ATTGGAGAAGGCGATTATGA+TGG | - | chr7_4:45845531-45845550 | None:intergenic | 40.0% | |
| GCTGCAAAGAATGATGCTAT+GGG | - | chr7_4:45845943-45845962 | None:intergenic | 40.0% | |
| !!! | AGCCTATATTTTGGGTTGCT+CGG | + | chr7_4:45845960-45845979 | Msa1157060:intron | 40.0% |
| TACCGAGCAACCCAAAATAT+AGG | - | chr7_4:45845965-45845984 | None:intergenic | 40.0% | |
| GAGAAAAAAGAGACAGGTAG+GGG | + | chr7_4:45846130-45846149 | Msa1157060:intron | 40.0% | |
| ! | ATTCATTAAGTTGCAGCGAC+AGG | + | chr7_4:45846186-45846205 | Msa1157060:intron | 40.0% |
| AAAGGTGAGAGAAAGTTGCA+AGG | - | chr7_4:45841251-45841270 | None:intergenic | 40.0% | |
| !!! | AGCGGTTTTTTTGGTTTAGG+GGG | - | chr7_4:45841280-45841299 | None:intergenic | 40.0% |
| !!! | GAGCGGTTTTTTTGGTTTAG+GGG | - | chr7_4:45841281-45841300 | None:intergenic | 40.0% |
| !!! | GGAGCGGTTTTTTTGGTTTA+GGG | - | chr7_4:45841282-45841301 | None:intergenic | 40.0% |
| ! | GTTGGTAGATAAAAAGGGAG+CGG | - | chr7_4:45841298-45841317 | None:intergenic | 40.0% |
| CATGCTCATATGGTCAAGAT+CGG | + | chr7_4:45841798-45841817 | Msa1157060:intron | 40.0% | |
| GTTGTGACTGGATCAAAGTT+TGG | + | chr7_4:45842022-45842041 | Msa1157060:intron | 40.0% | |
| GTTGTTGAGTTCACACATTC+AGG | - | chr7_4:45842095-45842114 | None:intergenic | 40.0% | |
| AATGTGTGAACTCAACAACC+AGG | + | chr7_4:45842096-45842115 | Msa1157060:intron | 40.0% | |
| TGTCAAATGTGAAGTCAACC+TGG | - | chr7_4:45842117-45842136 | None:intergenic | 40.0% | |
| TACAATGTCATGTGTCTCAG+TGG | + | chr7_4:45842301-45842320 | Msa1157060:intron | 40.0% | |
| TGTTGTGGTGATTACAGCTA+TGG | + | chr7_4:45842355-45842374 | Msa1157060:intron | 40.0% | |
| ! | TTGATTTGACAACTAGGGAC+AGG | + | chr7_4:45842608-45842627 | Msa1157060:intron | 40.0% |
| TGTCTTGCCTTCATACTCTT+AGG | + | chr7_4:45842762-45842781 | Msa1157060:intron | 40.0% | |
| ! | CACTGATGCATTTGGAATTC+AGG | - | chr7_4:45842997-45843016 | None:intergenic | 40.0% |
| ! | ATTATGTGGTTTTCTGCTGC+TGG | + | chr7_4:45843115-45843134 | Msa1157060:intron | 40.0% |
| ! | GTTAGTTTGATGCCAATAGG+TGG | + | chr7_4:45843241-45843260 | Msa1157060:intron | 40.0% |
| ! | AATTCAGGTTCATGCAAACG+AGG | + | chr7_4:45843268-45843287 | Msa1157060:CDS | 40.0% |
| ! | ATTCAGGTTCATGCAAACGA+GGG | + | chr7_4:45843269-45843288 | Msa1157060:CDS | 40.0% |
| !! | TGGTTCATCATTTTGGGGAA+TGG | + | chr7_4:45843900-45843919 | Msa1157060:CDS | 40.0% |
| ATGTTAGCGAGACAGAAAAC+GGG | - | chr7_4:45844094-45844113 | None:intergenic | 40.0% | |
| !! | CAGTGTCCACTTTTGGATAA+AGG | - | chr7_4:45844118-45844137 | None:intergenic | 40.0% |
| TTATCCAAAAGTGGACACTG+CGG | + | chr7_4:45844118-45844137 | Msa1157060:intron | 40.0% | |
| ! | ATTTTGAACTTGTCCCTGGT+TGG | + | chr7_4:45844363-45844382 | Msa1157060:intron | 40.0% |
| CAAAACCATTACAAGGGCAA+GGG | - | chr7_4:45844653-45844672 | None:intergenic | 40.0% | |
| ! | CTTGCCCTTGTAATGGTTTT+GGG | + | chr7_4:45844652-45844671 | Msa1157060:CDS | 40.0% |
| CTTCCCACCAAATAAGAAAG+TGG | - | chr7_4:45844977-45844996 | None:intergenic | 40.0% | |
| ! | TTCTTATTTGGTGGGAAGAG+AGG | + | chr7_4:45844979-45844998 | Msa1157060:intron | 40.0% |
| ! | TCTTATTTGGTGGGAAGAGA+GGG | + | chr7_4:45844980-45844999 | Msa1157060:intron | 40.0% |
| CGGTAATAGTATAGCCATAG+GGG | + | chr7_4:45845122-45845141 | Msa1157060:intron | 40.0% | |
| GGTAATAGTATAGCCATAGG+GGG | + | chr7_4:45845123-45845142 | Msa1157060:intron | 40.0% | |
| CGATATCATTCCCCTAAAAG+TGG | - | chr7_4:45845223-45845242 | None:intergenic | 40.0% | |
| !! | GGACTGGTCATATTATCATG+AGG | + | chr7_4:45845273-45845292 | Msa1157060:intron | 40.0% |
| ! | CAAGACATTTTCAACCCAAG+TGG | - | chr7_4:45845351-45845370 | None:intergenic | 40.0% |
| TTGGAGAAGGCGATTATGAT+GGG | - | chr7_4:45845530-45845549 | None:intergenic | 40.0% | |
| ATTGGAGAAGGCGATTATGA+TGG | - | chr7_4:45845531-45845550 | None:intergenic | 40.0% | |
| GCTGCAAAGAATGATGCTAT+GGG | - | chr7_4:45845943-45845962 | None:intergenic | 40.0% | |
| !!! | AGCCTATATTTTGGGTTGCT+CGG | + | chr7_4:45845960-45845979 | Msa1157060:intron | 40.0% |
| TACCGAGCAACCCAAAATAT+AGG | - | chr7_4:45845965-45845984 | None:intergenic | 40.0% | |
| GAGAAAAAAGAGACAGGTAG+GGG | + | chr7_4:45846130-45846149 | Msa1157060:intron | 40.0% | |
| ! | ATTCATTAAGTTGCAGCGAC+AGG | + | chr7_4:45846186-45846205 | Msa1157060:intron | 40.0% |
| !!! | TTTTTTTGGTTTAGGGGGGG+TGG | - | chr7_4:45841275-45841294 | None:intergenic | 45.0% |
| !!! | CGGTTTTTTTGGTTTAGGGG+GGG | - | chr7_4:45841278-45841297 | None:intergenic | 45.0% |
| !!! | GCGGTTTTTTTGGTTTAGGG+GGG | - | chr7_4:45841279-45841298 | None:intergenic | 45.0% |
| !!! | GGGAGCGGTTTTTTTGGTTT+AGG | - | chr7_4:45841283-45841302 | None:intergenic | 45.0% |
| AGACTGTAGCAATGCCAAAC+TGG | + | chr7_4:45841375-45841394 | Msa1157060:exon | 45.0% | |
| GACTGTAGCAATGCCAAACT+GGG | + | chr7_4:45841376-45841395 | Msa1157060:exon | 45.0% | |
| CAGTTCTTAAGCTCCCAGTT+TGG | - | chr7_4:45841392-45841411 | None:intergenic | 45.0% | |
| GTTTAGAGAGAGAGAGAGAG+AGG | - | chr7_4:45841482-45841501 | None:intergenic | 45.0% | |
| TCAATGACTGCACGGAATCT+CGG | - | chr7_4:45841750-45841769 | None:intergenic | 45.0% | |
| CTCATATGGTCAAGATCGGA+CGG | + | chr7_4:45841802-45841821 | Msa1157060:intron | 45.0% | |
| ACAATCTGATCGAGAGCAGA+CGG | - | chr7_4:45841890-45841909 | None:intergenic | 45.0% | |
| CTCTAAGCTATTCAATCGCG+TGG | - | chr7_4:45841956-45841975 | None:intergenic | 45.0% | |
| CACGCGATTGAATAGCTTAG+AGG | + | chr7_4:45841954-45841973 | Msa1157060:intron | 45.0% | |
| TGTGGTGATTACAGCTATGG+AGG | + | chr7_4:45842358-45842377 | Msa1157060:intron | 45.0% | |
| ATTGCCTGTTTGCTCACTTG+TGG | + | chr7_4:45842441-45842460 | Msa1157060:CDS | 45.0% | |
| !! | ACATGCAGCACTGATGCATT+TGG | - | chr7_4:45843005-45843024 | None:intergenic | 45.0% |
| AAAATAAGGCTGATGAGGCC+CGG | - | chr7_4:45843141-45843160 | None:intergenic | 45.0% | |
| AGTTTGATGCCAATAGGTGG+AGG | + | chr7_4:45843244-45843263 | Msa1157060:intron | 45.0% | |
| GTTTGATGCCAATAGGTGGA+GGG | + | chr7_4:45843245-45843264 | Msa1157060:intron | 45.0% | |
| ! | AGCTCTAACGCTACTTGAAG+TGG | - | chr7_4:45843422-45843441 | None:intergenic | 45.0% |
| CTCATTATTGGCGGGAACTT+AGG | - | chr7_4:45843740-45843759 | None:intergenic | 45.0% | |
| CTAAGTTCCCGCCAATAATG+AGG | + | chr7_4:45843738-45843757 | Msa1157060:intron | 45.0% | |
| GGTGTCTGTGTTTCCATTCA+AGG | - | chr7_4:45843789-45843808 | None:intergenic | 45.0% | |
| TATCCAAAAGTGGACACTGC+GGG | + | chr7_4:45844119-45844138 | Msa1157060:intron | 45.0% | |
| AGGAAACATGTGAAGAGGAC+AGG | - | chr7_4:45844337-45844356 | None:intergenic | 45.0% | |
| CCAAAACCATTACAAGGGCA+AGG | - | chr7_4:45844654-45844673 | None:intergenic | 45.0% | |
| ! | CCTTGCCCTTGTAATGGTTT+TGG | + | chr7_4:45844651-45844670 | Msa1157060:CDS | 45.0% |
| CCCACCCAAAACCATTACAA+GGG | - | chr7_4:45844659-45844678 | None:intergenic | 45.0% | |
| !!! | CCCTTGTAATGGTTTTGGGT+GGG | + | chr7_4:45844656-45844675 | Msa1157060:CDS | 45.0% |
| !!! | CCTTGTAATGGTTTTGGGTG+GGG | + | chr7_4:45844657-45844676 | Msa1157060:CDS | 45.0% |
| !! | GTTTTGGGTGGGGAGTTATT+TGG | + | chr7_4:45844667-45844686 | Msa1157060:CDS | 45.0% |
| CCAGTAACTGTTGGTCCAAA+AGG | - | chr7_4:45844734-45844753 | None:intergenic | 45.0% | |
| ! | CCTTTTGGACCAACAGTTAC+TGG | + | chr7_4:45844731-45844750 | Msa1157060:intron | 45.0% |
| CTTTGCGCATCTTTGTACCT+TGG | + | chr7_4:45845252-45845271 | Msa1157060:intron | 45.0% | |
| ! | GTATCCAAGCTGTTTGTTGC+TGG | + | chr7_4:45845812-45845831 | Msa1157060:three_prime_UTR | 45.0% |
| GGCTGCAAAGAATGATGCTA+TGG | - | chr7_4:45845944-45845963 | None:intergenic | 45.0% | |
| ! | TATGAAACTGGCTCATGCGT+CGG | + | chr7_4:45846001-45846020 | Msa1157060:intron | 45.0% |
| ! | TCGAGACTTGTTTCAGAGTG+AGG | + | chr7_4:45846068-45846087 | Msa1157060:intron | 45.0% |
| ! | AGACTTGTTTCAGAGTGAGG+AGG | + | chr7_4:45846071-45846090 | Msa1157060:intron | 45.0% |
| TTGTTTCAGAGTGAGGAGGA+TGG | + | chr7_4:45846075-45846094 | Msa1157060:intron | 45.0% | |
| AAAAAGAGACAGGTAGGGGA+TGG | + | chr7_4:45846134-45846153 | Msa1157060:intron | 45.0% | |
| !!! | TTTTTTTGGTTTAGGGGGGG+TGG | - | chr7_4:45841275-45841294 | None:intergenic | 45.0% |
| !!! | CGGTTTTTTTGGTTTAGGGG+GGG | - | chr7_4:45841278-45841297 | None:intergenic | 45.0% |
| !!! | GCGGTTTTTTTGGTTTAGGG+GGG | - | chr7_4:45841279-45841298 | None:intergenic | 45.0% |
| !!! | GGGAGCGGTTTTTTTGGTTT+AGG | - | chr7_4:45841283-45841302 | None:intergenic | 45.0% |
| AGACTGTAGCAATGCCAAAC+TGG | + | chr7_4:45841375-45841394 | Msa1157060:exon | 45.0% | |
| GACTGTAGCAATGCCAAACT+GGG | + | chr7_4:45841376-45841395 | Msa1157060:exon | 45.0% | |
| CAGTTCTTAAGCTCCCAGTT+TGG | - | chr7_4:45841392-45841411 | None:intergenic | 45.0% | |
| GTTTAGAGAGAGAGAGAGAG+AGG | - | chr7_4:45841482-45841501 | None:intergenic | 45.0% | |
| TCAATGACTGCACGGAATCT+CGG | - | chr7_4:45841750-45841769 | None:intergenic | 45.0% | |
| CTCATATGGTCAAGATCGGA+CGG | + | chr7_4:45841802-45841821 | Msa1157060:intron | 45.0% | |
| ACAATCTGATCGAGAGCAGA+CGG | - | chr7_4:45841890-45841909 | None:intergenic | 45.0% | |
| CTCTAAGCTATTCAATCGCG+TGG | - | chr7_4:45841956-45841975 | None:intergenic | 45.0% | |
| CACGCGATTGAATAGCTTAG+AGG | + | chr7_4:45841954-45841973 | Msa1157060:intron | 45.0% | |
| TGTGGTGATTACAGCTATGG+AGG | + | chr7_4:45842358-45842377 | Msa1157060:intron | 45.0% | |
| ATTGCCTGTTTGCTCACTTG+TGG | + | chr7_4:45842441-45842460 | Msa1157060:CDS | 45.0% | |
| !! | ACATGCAGCACTGATGCATT+TGG | - | chr7_4:45843005-45843024 | None:intergenic | 45.0% |
| AAAATAAGGCTGATGAGGCC+CGG | - | chr7_4:45843141-45843160 | None:intergenic | 45.0% | |
| AGTTTGATGCCAATAGGTGG+AGG | + | chr7_4:45843244-45843263 | Msa1157060:intron | 45.0% | |
| GTTTGATGCCAATAGGTGGA+GGG | + | chr7_4:45843245-45843264 | Msa1157060:intron | 45.0% | |
| ! | AGCTCTAACGCTACTTGAAG+TGG | - | chr7_4:45843422-45843441 | None:intergenic | 45.0% |
| CTCATTATTGGCGGGAACTT+AGG | - | chr7_4:45843740-45843759 | None:intergenic | 45.0% | |
| CTAAGTTCCCGCCAATAATG+AGG | + | chr7_4:45843738-45843757 | Msa1157060:intron | 45.0% | |
| GGTGTCTGTGTTTCCATTCA+AGG | - | chr7_4:45843789-45843808 | None:intergenic | 45.0% | |
| TATCCAAAAGTGGACACTGC+GGG | + | chr7_4:45844119-45844138 | Msa1157060:intron | 45.0% | |
| AGGAAACATGTGAAGAGGAC+AGG | - | chr7_4:45844337-45844356 | None:intergenic | 45.0% | |
| CCAAAACCATTACAAGGGCA+AGG | - | chr7_4:45844654-45844673 | None:intergenic | 45.0% | |
| ! | CCTTGCCCTTGTAATGGTTT+TGG | + | chr7_4:45844651-45844670 | Msa1157060:CDS | 45.0% |
| CCCACCCAAAACCATTACAA+GGG | - | chr7_4:45844659-45844678 | None:intergenic | 45.0% | |
| !!! | CCCTTGTAATGGTTTTGGGT+GGG | + | chr7_4:45844656-45844675 | Msa1157060:CDS | 45.0% |
| !!! | CCTTGTAATGGTTTTGGGTG+GGG | + | chr7_4:45844657-45844676 | Msa1157060:CDS | 45.0% |
| !! | GTTTTGGGTGGGGAGTTATT+TGG | + | chr7_4:45844667-45844686 | Msa1157060:CDS | 45.0% |
| CCAGTAACTGTTGGTCCAAA+AGG | - | chr7_4:45844734-45844753 | None:intergenic | 45.0% | |
| ! | CCTTTTGGACCAACAGTTAC+TGG | + | chr7_4:45844731-45844750 | Msa1157060:intron | 45.0% |
| CTTTGCGCATCTTTGTACCT+TGG | + | chr7_4:45845252-45845271 | Msa1157060:intron | 45.0% | |
| ! | GTATCCAAGCTGTTTGTTGC+TGG | + | chr7_4:45845812-45845831 | Msa1157060:three_prime_UTR | 45.0% |
| GGCTGCAAAGAATGATGCTA+TGG | - | chr7_4:45845944-45845963 | None:intergenic | 45.0% | |
| ! | TATGAAACTGGCTCATGCGT+CGG | + | chr7_4:45846001-45846020 | Msa1157060:intron | 45.0% |
| ! | TCGAGACTTGTTTCAGAGTG+AGG | + | chr7_4:45846068-45846087 | Msa1157060:intron | 45.0% |
| ! | AGACTTGTTTCAGAGTGAGG+AGG | + | chr7_4:45846071-45846090 | Msa1157060:intron | 45.0% |
| TTGTTTCAGAGTGAGGAGGA+TGG | + | chr7_4:45846075-45846094 | Msa1157060:intron | 45.0% | |
| AAAAAGAGACAGGTAGGGGA+TGG | + | chr7_4:45846134-45846153 | Msa1157060:intron | 45.0% | |
| AGGTACGAGGAGGATGACAA+CGG | - | chr7_4:45841462-45841481 | None:intergenic | 50.0% | |
| CTTGCCACAAGTGAGCAAAC+AGG | - | chr7_4:45842448-45842467 | None:intergenic | 50.0% | |
| CTGTTTGCTCACTTGTGGCA+AGG | + | chr7_4:45842446-45842465 | Msa1157060:CDS | 50.0% | |
| CCTGAATTCCCTCCACCTAT+TGG | - | chr7_4:45843256-45843275 | None:intergenic | 50.0% | |
| CCAATAGGTGGAGGGAATTC+AGG | + | chr7_4:45843253-45843272 | Msa1157060:intron | 50.0% | |
| AGGTTCATGCAAACGAGGGA+GGG | + | chr7_4:45843273-45843292 | Msa1157060:CDS | 50.0% | |
| ! | TACTGGTTGATCTTGCCTGC+TGG | + | chr7_4:45843320-45843339 | Msa1157060:CDS | 50.0% |
| CACCACAAGTTGCACTGCTA+TGG | + | chr7_4:45843691-45843710 | Msa1157060:intron | 50.0% | |
| AGCCATAGCAGTGCAACTTG+TGG | - | chr7_4:45843696-45843715 | None:intergenic | 50.0% | |
| CTTACTGCAAGGATTGCTGC+TGG | + | chr7_4:45843949-45843968 | Msa1157060:CDS | 50.0% | |
| ! | TGGTTGCTTTCTTGCTGCTC+TGG | + | chr7_4:45843969-45843988 | Msa1157060:CDS | 50.0% |
| ATCCAAAAGTGGACACTGCG+GGG | + | chr7_4:45844120-45844139 | Msa1157060:intron | 50.0% | |
| !!! | GCCCTTGTAATGGTTTTGGG+TGG | + | chr7_4:45844655-45844674 | Msa1157060:CDS | 50.0% |
| CCCCACCCAAAACCATTACA+AGG | - | chr7_4:45844660-45844679 | None:intergenic | 50.0% | |
| CTATCTCACTTTGCCCCCTA+TGG | - | chr7_4:45845139-45845158 | None:intergenic | 50.0% | |
| CGCATCTTTGTACCTTGGAC+TGG | + | chr7_4:45845257-45845276 | Msa1157060:intron | 50.0% | |
| CTTGCCAGCAACAAACAGCT+TGG | - | chr7_4:45845819-45845838 | None:intergenic | 50.0% | |
| ATTGGTCCAGAGACCAACTC+TGG | - | chr7_4:45846254-45846273 | None:intergenic | 50.0% | |
| AGGTACGAGGAGGATGACAA+CGG | - | chr7_4:45841462-45841481 | None:intergenic | 50.0% | |
| CTTGCCACAAGTGAGCAAAC+AGG | - | chr7_4:45842448-45842467 | None:intergenic | 50.0% | |
| CTGTTTGCTCACTTGTGGCA+AGG | + | chr7_4:45842446-45842465 | Msa1157060:CDS | 50.0% | |
| CCTGAATTCCCTCCACCTAT+TGG | - | chr7_4:45843256-45843275 | None:intergenic | 50.0% | |
| CCAATAGGTGGAGGGAATTC+AGG | + | chr7_4:45843253-45843272 | Msa1157060:intron | 50.0% | |
| AGGTTCATGCAAACGAGGGA+GGG | + | chr7_4:45843273-45843292 | Msa1157060:CDS | 50.0% | |
| ! | TACTGGTTGATCTTGCCTGC+TGG | + | chr7_4:45843320-45843339 | Msa1157060:CDS | 50.0% |
| CACCACAAGTTGCACTGCTA+TGG | + | chr7_4:45843691-45843710 | Msa1157060:intron | 50.0% | |
| AGCCATAGCAGTGCAACTTG+TGG | - | chr7_4:45843696-45843715 | None:intergenic | 50.0% | |
| CTTACTGCAAGGATTGCTGC+TGG | + | chr7_4:45843949-45843968 | Msa1157060:CDS | 50.0% | |
| ! | TGGTTGCTTTCTTGCTGCTC+TGG | + | chr7_4:45843969-45843988 | Msa1157060:CDS | 50.0% |
| ATCCAAAAGTGGACACTGCG+GGG | + | chr7_4:45844120-45844139 | Msa1157060:intron | 50.0% | |
| !!! | GCCCTTGTAATGGTTTTGGG+TGG | + | chr7_4:45844655-45844674 | Msa1157060:CDS | 50.0% |
| CCCCACCCAAAACCATTACA+AGG | - | chr7_4:45844660-45844679 | None:intergenic | 50.0% | |
| CTATCTCACTTTGCCCCCTA+TGG | - | chr7_4:45845139-45845158 | None:intergenic | 50.0% | |
| CGCATCTTTGTACCTTGGAC+TGG | + | chr7_4:45845257-45845276 | Msa1157060:intron | 50.0% | |
| CTTGCCAGCAACAAACAGCT+TGG | - | chr7_4:45845819-45845838 | None:intergenic | 50.0% | |
| ATTGGTCCAGAGACCAACTC+TGG | - | chr7_4:45846254-45846273 | None:intergenic | 50.0% | |
| TGGTTTAGGGGGGGTGGAAA+AGG | - | chr7_4:45841269-45841288 | None:intergenic | 55.0% | |
| ! | AGAGAGAGAGAGGTACGAGG+AGG | - | chr7_4:45841472-45841491 | None:intergenic | 55.0% |
| ! | GAGAGAGAGAGAGAGGTACG+AGG | - | chr7_4:45841475-45841494 | None:intergenic | 55.0% |
| GCGTGCAGTCAATGACTGCA+CGG | - | chr7_4:45841758-45841777 | None:intergenic | 55.0% | |
| ! | TGTGGTTTTCTGCTGCTGGC+CGG | + | chr7_4:45843119-45843138 | Msa1157060:intron | 55.0% |
| CAGGTTCATGCAAACGAGGG+AGG | + | chr7_4:45843272-45843291 | Msa1157060:CDS | 55.0% | |
| GGTTCATGCAAACGAGGGAG+GGG | + | chr7_4:45843274-45843293 | Msa1157060:CDS | 55.0% | |
| AGACGCGTGGTGGCATATAC+TGG | + | chr7_4:45843303-45843322 | Msa1157060:CDS | 55.0% | |
| ACACTGCGGGGACTCTGTAT+CGG | + | chr7_4:45844132-45844151 | Msa1157060:CDS | 55.0% | |
| GTCTGCCCTTGCCCTTGTAA+TGG | + | chr7_4:45844645-45844664 | Msa1157060:CDS | 55.0% | |
| GGTGGGAAGAGAGGGATTAC+AGG | + | chr7_4:45844988-45845007 | Msa1157060:intron | 55.0% | |
| GTCCAGAGACCAACTCTGGT+GGG | - | chr7_4:45846250-45846269 | None:intergenic | 55.0% | |
| TGGTTTAGGGGGGGTGGAAA+AGG | - | chr7_4:45841269-45841288 | None:intergenic | 55.0% | |
| ! | AGAGAGAGAGAGGTACGAGG+AGG | - | chr7_4:45841472-45841491 | None:intergenic | 55.0% |
| ! | GAGAGAGAGAGAGAGGTACG+AGG | - | chr7_4:45841475-45841494 | None:intergenic | 55.0% |
| GCGTGCAGTCAATGACTGCA+CGG | - | chr7_4:45841758-45841777 | None:intergenic | 55.0% | |
| ! | TGTGGTTTTCTGCTGCTGGC+CGG | + | chr7_4:45843119-45843138 | Msa1157060:intron | 55.0% |
| CAGGTTCATGCAAACGAGGG+AGG | + | chr7_4:45843272-45843291 | Msa1157060:CDS | 55.0% | |
| GGTTCATGCAAACGAGGGAG+GGG | + | chr7_4:45843274-45843293 | Msa1157060:CDS | 55.0% | |
| AGACGCGTGGTGGCATATAC+TGG | + | chr7_4:45843303-45843322 | Msa1157060:CDS | 55.0% | |
| ACACTGCGGGGACTCTGTAT+CGG | + | chr7_4:45844132-45844151 | Msa1157060:CDS | 55.0% | |
| GTCTGCCCTTGCCCTTGTAA+TGG | + | chr7_4:45844645-45844664 | Msa1157060:CDS | 55.0% | |
| GGTGGGAAGAGAGGGATTAC+AGG | + | chr7_4:45844988-45845007 | Msa1157060:intron | 55.0% | |
| GTCCAGAGACCAACTCTGGT+GGG | - | chr7_4:45846250-45846269 | None:intergenic | 55.0% | |
| ! | GTGGTTTTCTGCTGCTGGCC+GGG | + | chr7_4:45843120-45843139 | Msa1157060:intron | 60.0% |
| ! | GTCCCCGCAGTGTCCACTTT+TGG | - | chr7_4:45844125-45844144 | None:intergenic | 60.0% |
| GGAACGACACCCACCAGAGT+TGG | + | chr7_4:45846238-45846257 | Msa1157060:intron | 60.0% | |
| ! | CACCCACCAGAGTTGGTCTC+TGG | + | chr7_4:45846245-45846264 | Msa1157060:intron | 60.0% |
| GGTCCAGAGACCAACTCTGG+TGG | - | chr7_4:45846251-45846270 | None:intergenic | 60.0% | |
| ! | GTGGTTTTCTGCTGCTGGCC+GGG | + | chr7_4:45843120-45843139 | Msa1157060:intron | 60.0% |
| ! | GTCCCCGCAGTGTCCACTTT+TGG | - | chr7_4:45844125-45844144 | None:intergenic | 60.0% |
| GGAACGACACCCACCAGAGT+TGG | + | chr7_4:45846238-45846257 | Msa1157060:intron | 60.0% | |
| ! | CACCCACCAGAGTTGGTCTC+TGG | + | chr7_4:45846245-45846264 | Msa1157060:intron | 60.0% |
| GGTCCAGAGACCAACTCTGG+TGG | - | chr7_4:45846251-45846270 | None:intergenic | 60.0% | |
| GGAGGGGTAACACAGACGCG+TGG | + | chr7_4:45843290-45843309 | Msa1157060:CDS | 65.0% | |
| GGGGTAACACAGACGCGTGG+TGG | + | chr7_4:45843293-45843312 | Msa1157060:CDS | 65.0% | |
| GGAGGGGTAACACAGACGCG+TGG | + | chr7_4:45843290-45843309 | Msa1157060:CDS | 65.0% | |
| GGGGTAACACAGACGCGTGG+TGG | + | chr7_4:45843293-45843312 | Msa1157060:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 45841181 | 45846329 | 45841181 | ID=Msa1157060;Name=Msa1157060 |
| chr7_4 | mRNA | 45841181 | 45846329 | 45841181 | ID=Msa1157060-mRNA-1;Parent=Msa1157060;Name=Msa1157060-mRNA-1;_AED=0.19;_eAED=0.19;_QI=205|0.88|1|1|0.88|0.8|10|210|212 |
| chr7_4 | exon | 45841181 | 45841475 | 45841181 | ID=Msa1157060-mRNA-1:exon:11916;Parent=Msa1157060-mRNA-1 |
| chr7_4 | exon | 45842372 | 45842467 | 45842372 | ID=Msa1157060-mRNA-1:exon:11917;Parent=Msa1157060-mRNA-1 |
| chr7_4 | exon | 45843260 | 45843344 | 45843260 | ID=Msa1157060-mRNA-1:exon:11918;Parent=Msa1157060-mRNA-1 |
| chr7_4 | exon | 45843896 | 45844017 | 45843896 | ID=Msa1157060-mRNA-1:exon:11919;Parent=Msa1157060-mRNA-1 |
| chr7_4 | exon | 45844129 | 45844153 | 45844129 | ID=Msa1157060-mRNA-1:exon:11920;Parent=Msa1157060-mRNA-1 |
| chr7_4 | exon | 45844243 | 45844326 | 45844243 | ID=Msa1157060-mRNA-1:exon:11921;Parent=Msa1157060-mRNA-1 |
| chr7_4 | exon | 45844455 | 45844484 | 45844455 | ID=Msa1157060-mRNA-1:exon:11922;Parent=Msa1157060-mRNA-1 |
| chr7_4 | exon | 45844583 | 45844688 | 45844583 | ID=Msa1157060-mRNA-1:exon:11923;Parent=Msa1157060-mRNA-1 |
| chr7_4 | exon | 45845800 | 45845964 | 45845800 | ID=Msa1157060-mRNA-1:exon:11924;Parent=Msa1157060-mRNA-1 |
| chr7_4 | exon | 45846284 | 45846329 | 45846284 | ID=Msa1157060-mRNA-1:exon:11925;Parent=Msa1157060-mRNA-1 |
| chr7_4 | five_prime_UTR | 45841181 | 45841385 | 45841181 | ID=Msa1157060-mRNA-1:five_prime_utr;Parent=Msa1157060-mRNA-1 |
| chr7_4 | CDS | 45841386 | 45841475 | 45841386 | ID=Msa1157060-mRNA-1:cds;Parent=Msa1157060-mRNA-1 |
| chr7_4 | CDS | 45842372 | 45842467 | 45842372 | ID=Msa1157060-mRNA-1:cds;Parent=Msa1157060-mRNA-1 |
| chr7_4 | CDS | 45843260 | 45843344 | 45843260 | ID=Msa1157060-mRNA-1:cds;Parent=Msa1157060-mRNA-1 |
| chr7_4 | CDS | 45843896 | 45844017 | 45843896 | ID=Msa1157060-mRNA-1:cds;Parent=Msa1157060-mRNA-1 |
| chr7_4 | CDS | 45844129 | 45844153 | 45844129 | ID=Msa1157060-mRNA-1:cds;Parent=Msa1157060-mRNA-1 |
| chr7_4 | CDS | 45844243 | 45844326 | 45844243 | ID=Msa1157060-mRNA-1:cds;Parent=Msa1157060-mRNA-1 |
| chr7_4 | CDS | 45844455 | 45844484 | 45844455 | ID=Msa1157060-mRNA-1:cds;Parent=Msa1157060-mRNA-1 |
| chr7_4 | CDS | 45844583 | 45844688 | 45844583 | ID=Msa1157060-mRNA-1:cds;Parent=Msa1157060-mRNA-1 |
| chr7_4 | CDS | 45845800 | 45845800 | 45845800 | ID=Msa1157060-mRNA-1:cds;Parent=Msa1157060-mRNA-1 |
| chr7_4 | three_prime_UTR | 45845801 | 45845964 | 45845801 | ID=Msa1157060-mRNA-1:three_prime_utr;Parent=Msa1157060-mRNA-1 |
| chr7_4 | three_prime_UTR | 45846284 | 45846329 | 45846284 | ID=Msa1157060-mRNA-1:three_prime_utr;Parent=Msa1157060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
