AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1373170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1373170 MtrunA17_Chr7g0272641 95.783 664 14 2 1 650 1 664 0.0 1296
Msa1373170 MtrunA17_Chr1g0197401 43.976 498 248 7 171 642 12 504 9.15e-142 422
Msa1373170 MtrunA17_Chr4g0066851 35.119 336 200 4 169 486 79 414 1.13e-60 215
Msa1373170 MtrunA17_Chr2g0286241 33.968 315 191 3 169 466 71 385 2.87e-57 206
Msa1373170 MtrunA17_Chr1g0192821 33.784 296 166 12 174 446 15 303 1.18e-31 130
Msa1373170 MtrunA17_Chr4g0061581 27.946 297 155 6 170 455 61 309 1.48e-27 117
Msa1373170 MtrunA17_Chr1g0198221 32.886 149 90 5 279 419 20 166 1.43e-14 76.6
Msa1373170 MtrunA17_Chr1g0198221 25.267 281 150 7 170 433 50 287 1.13e-13 73.9
Msa1373170 MtrunA17_Chr1g0198221 23.113 212 123 4 180 389 13 186 8.56e-12 68.2
Msa1373170 MtrunA17_Chr2g0311721 26.744 258 139 7 170 423 4 215 1.93e-14 75.1
Msa1373170 MtrunA17_Chr4g0074871 25.000 292 174 13 190 453 281 555 3.10e-12 70.1
Msa1373170 MtrunA17_Chr4g0074871 30.233 172 106 5 291 456 294 457 1.55e-11 67.8
Msa1373170 MtrunA17_Chr1g0196221 32.877 146 75 6 288 414 45 186 5.54e-11 65.9
Msa1373170 MtrunA17_Chr8g0391901 30.282 142 93 4 278 414 315 455 7.28e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1373170 AT3G05420.2 72.090 670 161 7 3 649 1 667 0.0 985
Msa1373170 AT3G05420.1 72.090 670 160 8 3 649 1 666 0.0 980
Msa1373170 AT5G27630.3 68.373 664 182 9 5 643 4 664 0.0 908
Msa1373170 AT5G27630.4 68.079 661 175 9 5 643 4 650 0.0 898
Msa1373170 AT5G27630.1 68.030 660 171 9 5 643 4 644 0.0 889
Msa1373170 AT5G27630.2 68.539 534 145 6 5 518 4 534 0.0 742
Msa1373170 AT5G04420.2 44.622 502 233 6 171 637 19 510 2.29e-143 427
Msa1373170 AT5G04420.1 44.622 502 233 6 171 637 19 510 2.29e-143 427
Msa1373170 AT5G04420.3 44.622 502 233 6 171 637 19 510 2.29e-143 427
Msa1373170 AT5G18590.2 35.082 305 179 5 167 453 59 362 1.96e-54 198
Msa1373170 AT5G18590.1 35.082 305 179 5 167 453 59 362 1.96e-54 198
Msa1373170 AT1G18610.1 27.778 342 175 10 168 481 55 352 1.51e-27 117
Msa1373170 AT1G18610.2 27.778 342 175 10 168 481 55 352 1.51e-27 117
Msa1373170 AT1G74150.3 28.521 284 143 7 161 426 38 279 2.57e-26 114
Msa1373170 AT1G74150.2 28.521 284 143 7 161 426 38 279 2.65e-26 114
Msa1373170 AT1G74150.4 28.462 260 137 5 174 426 46 263 2.91e-26 114
Msa1373170 AT1G74150.4 31.875 160 97 5 313 465 42 196 2.94e-13 73.2
Msa1373170 AT1G74150.1 28.521 284 143 7 161 426 38 279 2.99e-26 114
Msa1373170 AT2G36360.2 27.240 279 142 8 170 402 50 313 2.80e-16 82.4
Msa1373170 AT2G36360.2 31.757 148 93 3 278 418 19 165 7.34e-16 81.3
Msa1373170 AT2G36360.2 25.000 212 121 5 179 389 12 186 4.68e-12 69.3
Msa1373170 AT2G36360.1 27.240 279 142 8 170 402 50 313 2.80e-16 82.4
Msa1373170 AT2G36360.1 31.757 148 93 3 278 418 19 165 7.34e-16 81.3
Msa1373170 AT2G36360.1 25.000 212 121 5 179 389 12 186 4.68e-12 69.3
Msa1373170 AT2G36360.3 27.240 279 142 8 170 402 50 313 2.98e-16 82.4
Msa1373170 AT2G36360.3 31.757 148 93 3 278 418 19 165 7.21e-16 81.3
Msa1373170 AT2G36360.3 25.000 212 121 5 179 389 12 186 4.80e-12 69.3
Msa1373170 AT2G36360.4 27.240 279 142 8 170 402 50 313 4.36e-16 82.0
Msa1373170 AT2G36360.4 31.757 148 93 3 278 418 19 165 9.12e-16 81.3
Msa1373170 AT2G36360.4 25.000 212 121 5 179 389 12 186 8.31e-12 68.6
Msa1373170 AT4G04670.1 30.070 143 99 1 278 420 324 465 2.55e-15 80.5
Msa1373170 AT4G04670.1 23.220 323 194 8 182 499 320 593 2.42e-12 70.9
Msa1373170 AT1G74150.6 34.127 126 77 3 278 398 14 138 4.07e-14 75.1
Msa1373170 AT1G74150.5 34.127 126 77 3 278 398 14 138 4.07e-14 75.1
Msa1373170 AT2G36360.5 26.389 288 142 9 170 402 50 322 4.31e-14 75.9
Msa1373170 AT2G36360.5 24.643 280 168 9 179 418 12 288 1.91e-11 67.4
Msa1373170 AT4G27780.2 30.508 118 78 1 16 133 106 219 1.99e-12 68.6
Msa1373170 AT4G27780.1 35.165 91 55 1 16 106 106 192 7.65e-12 67.8
Msa1373170 AT2G18915.2 28.772 285 158 15 232 490 248 513 2.60e-11 67.0
Msa1373170 AT2G18915.1 28.772 285 158 15 232 490 238 503 3.06e-11 67.0
Msa1373170 AT2G27210.2 37.168 113 66 4 306 414 153 264 5.19e-11 66.6
Msa1373170 AT2G27210.1 37.168 113 66 4 306 414 153 264 5.52e-11 66.6
Msa1373170 AT5G48180.1 25.890 309 165 13 170 465 4 261 7.35e-11 64.7
Msa1373170 AT5G57360.1 27.308 260 150 11 214 453 228 468 9.11e-11 65.5
Msa1373170 AT1G08420.2 36.283 113 67 4 306 414 164 275 9.42e-11 65.9
Msa1373170 AT1G08420.1 36.283 113 67 4 306 414 164 275 9.44e-11 65.9
Msa1373170 AT5G57360.2 27.308 260 150 11 214 453 228 468 9.78e-11 65.5

Find 194 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGAAGAGCGGTGGATTT+AGG 0.146379 tig0019363:+134195 None:intergenic
GGTCAGAAGCTCCAAAATTT+TGG 0.162657 tig0019363:-125597 Msa1373170:CDS
GAAGAAGAGCGGTGGATTTA+GGG 0.181306 tig0019363:+134196 None:intergenic
ATCCATGTTATGTTATTTAT+TGG 0.192924 tig0019363:+134552 None:intergenic
AATAAGATTTAGCTTCTATT+TGG 0.195736 tig0019363:-125327 Msa1373170:three_prime_UTR
TTTGTAATGTTCCAAAATTT+TGG 0.220477 tig0019363:+125586 None:intergenic
CGGGTAGCATTTGTAGCATT+TGG 0.236529 tig0019363:+127348 None:intergenic
GTGTTCCCATTCTCAATTAC+TGG 0.248320 tig0019363:+131864 None:intergenic
GACCGATACTTACTTATCTT+TGG 0.248494 tig0019363:-129458 Msa1373170:CDS
AAAACTATTTCCTCTGAAAA+TGG 0.248717 tig0019363:-131828 Msa1373170:CDS
GGCGTGTGGGGTTGGCTTGC+CGG 0.253275 tig0019363:-125483 Msa1373170:CDS
CTTGAATGACCTGCATATTC+TGG 0.261804 tig0019363:-129833 Msa1373170:CDS
AGGACATGAAGGGAAAATTT+TGG 0.262823 tig0019363:-127301 Msa1373170:CDS
TTCATTTGAACGTCTATTAC+AGG 0.265735 tig0019363:+132398 None:intergenic
TTCATTCATCATCTGCATTC+TGG 0.278937 tig0019363:+125451 None:intergenic
AAAACCTCATATCGGGCTTT+TGG 0.290754 tig0019363:+131705 None:intergenic
CGCGATACAGGATCTGAATT+TGG 0.295314 tig0019363:-127327 Msa1373170:CDS
CAAGATAAATTGTACATATA+TGG 0.314234 tig0019363:-131567 Msa1373170:CDS
GTTCTTCTCTCTCAGCCTTC+AGG 0.316569 tig0019363:+126637 None:intergenic
TTTGGACGTTGACCAGATAT+TGG 0.327554 tig0019363:+131723 None:intergenic
CTGAACAACAATGCTTCATT+TGG 0.327692 tig0019363:-125417 Msa1373170:three_prime_UTR
TCCATGTGCTGGCCATTCTT+TGG 0.327874 tig0019363:-131216 Msa1373170:intron
GAAGATGTACTTGTATCTTT+TGG 0.331794 tig0019363:-127574 Msa1373170:CDS
AAGAGATTTAGTTGGAGAAT+TGG 0.336776 tig0019363:+134230 None:intergenic
CTCAATTACTGGTTCAACTT+TGG 0.347352 tig0019363:+131875 None:intergenic
CGACGAGTCCTCTACAACTT+TGG 0.350805 tig0019363:-131240 Msa1373170:CDS
GGGTAGCATTTGTAGCATTT+GGG 0.363871 tig0019363:+127349 None:intergenic
GTCATTACAGGGCTTGAGTT+TGG 0.367865 tig0019363:-127617 Msa1373170:intron
TATTATACCTTGGATACTTT+CGG 0.369378 tig0019363:+131034 None:intergenic
TCTTCAATTCAAACTTAACT+TGG 0.369386 tig0019363:+134383 None:intergenic
CAGGTGGAGGTTGCTGAATT+AGG 0.373715 tig0019363:-125618 Msa1373170:CDS
ATAAGATTTAGCTTCTATTT+GGG 0.375495 tig0019363:-125326 Msa1373170:three_prime_UTR
TGCAAGGTCGATTTGTGGCT+TGG 0.377894 tig0019363:+127417 None:intergenic
GCCGCAGCGTAGAACCGTTC+TGG 0.381048 tig0019363:+134276 None:intergenic
GACTGATATGAGATCACCTT+TGG 0.382324 tig0019363:+126659 None:intergenic
GCTCAGGTGGCGTGTGGGGT+TGG 0.389166 tig0019363:-125491 Msa1373170:CDS
TCTCTATAGCTTATATCAAC+AGG 0.390597 tig0019363:-134175 Msa1373170:intron
TTATTGTGTATTAATTAATT+CGG 0.398423 tig0019363:-125366 Msa1373170:three_prime_UTR
AGAGACGGTTGTACTGAATA+TGG 0.398869 tig0019363:-127817 Msa1373170:CDS
TGGATTGCACCTCCAATATC+TGG 0.399536 tig0019363:-131735 Msa1373170:CDS
GGTTGGCTTGCCGGTACTCC+TGG 0.400632 tig0019363:-125474 Msa1373170:CDS
TTAGATGTAAGAGATTTAGT+TGG 0.402954 tig0019363:+134222 None:intergenic
TTGGTCAAAGCTTGAGGTTA+AGG 0.406832 tig0019363:-131267 Msa1373170:CDS
GATGTTGTTATGGAAGGCTT+TGG 0.411884 tig0019363:-131780 Msa1373170:CDS
ACATCCCAGAACCCAGTTCA+TGG 0.419192 tig0019363:-133120 Msa1373170:CDS
TTGGTTGTAAGTTCATATAA+TGG 0.423699 tig0019363:-127598 Msa1373170:CDS
AATAAGCTCCTGTCAATTGC+CGG 0.431161 tig0019363:-131074 Msa1373170:CDS
ACAAATGCTACCCGCGATAC+AGG 0.439068 tig0019363:-127339 Msa1373170:CDS
CAGCGGTATGATCAGACCTT+GGG 0.439160 tig0019363:+129492 None:intergenic
GCGATGGCGAGAGCAAGTTC+TGG 0.441233 tig0019363:-134309 Msa1373170:CDS
GCAGGGCTCAGGTGGCGTGT+GGG 0.442660 tig0019363:-125496 Msa1373170:CDS
TGCATTCTGGCCAGGAGTAC+CGG 0.445380 tig0019363:+125464 None:intergenic
CGATACTTACTTATCTTTGG+AGG 0.449279 tig0019363:-129455 Msa1373170:CDS
GTTGAACCAGTAATTGAGAA+TGG 0.449496 tig0019363:-131870 Msa1373170:CDS
ATGGAAGGCTTTGGTTCAGT+TGG 0.450341 tig0019363:-131771 Msa1373170:CDS
ACAGGATAAAGATGTTGTTA+TGG 0.450800 tig0019363:-131790 Msa1373170:CDS
GCCAATCAGTGTCCCTTGTC+GGG 0.450997 tig0019363:-129900 Msa1373170:CDS
CAAGAGCCAAAACCTCATAT+CGG 0.452451 tig0019363:+131697 None:intergenic
CGAGCTGACCACGTACTGAT+TGG 0.453315 tig0019363:+126132 None:intergenic
GTGTGACAGTAGGGGAGAAC+TGG 0.456299 tig0019363:-129235 Msa1373170:CDS
TGCGGCATCTTACGTCGGTT+TGG 0.458181 tig0019363:-134259 Msa1373170:CDS
TTGTGTGGCCGGCAATTGAC+AGG 0.459083 tig0019363:+131066 None:intergenic
GGCAGGGCTCAGGTGGCGTG+TGG 0.462148 tig0019363:-125497 Msa1373170:CDS
GTTTAATACAAACCAAAGAA+TGG 0.462569 tig0019363:+131204 None:intergenic
AGCTCGCTGCTGAGCAGTCA+AGG 0.464648 tig0019363:-126115 Msa1373170:CDS
TTTAAGTGCAAAACAGAGGC+AGG 0.465741 tig0019363:-125514 Msa1373170:CDS
TGGATTTGAGAAGCTGGACT+TGG 0.465890 tig0019363:-131286 Msa1373170:CDS
GGGGAGAACTGGTTCATTGT+TGG 0.466702 tig0019363:-129224 Msa1373170:CDS
CAGTTGGAGTCTATGATCAA+TGG 0.467355 tig0019363:-131755 Msa1373170:CDS
TGACCTGCATATTCTGGACT+TGG 0.470489 tig0019363:-129827 Msa1373170:CDS
TGAACTCCTCCAGCGGCAAA+AGG 0.472639 tig0019363:-125556 Msa1373170:CDS
TCTGAAAATGGAAATCAAGT+TGG 0.477894 tig0019363:-131816 Msa1373170:CDS
GGCCAATCAGTGTCCCTTGT+CGG 0.478649 tig0019363:-129901 Msa1373170:CDS
ATCAATTTCGTCCCATGTCA+TGG 0.481723 tig0019363:+129801 None:intergenic
ATGTTACCACTGACCAAGCC+AGG 0.482985 tig0019363:+127790 None:intergenic
TATGCTTTCTAGGTATCACT+TGG 0.484168 tig0019363:-130046 Msa1373170:intron
AAATTGTGGAGCATAGCAAA+TGG 0.484561 tig0019363:-133096 Msa1373170:CDS
GCATGTCCTGCACGTGGCGT+TGG 0.486099 tig0019363:+129260 None:intergenic
TCCCGACAAGGGACACTGAT+TGG 0.489111 tig0019363:+129899 None:intergenic
GCATCTTACGTCGGTTTGGA+TGG 0.491314 tig0019363:-134255 Msa1373170:CDS
TGGATTGCAAGGTCGATTTG+TGG 0.491543 tig0019363:+127412 None:intergenic
GACATGCTGGTGTGACAGTA+GGG 0.492988 tig0019363:-129244 Msa1373170:CDS
CTGGGTTCTGGGATGTTACA+AGG 0.494600 tig0019363:+133127 None:intergenic
GATACTTACTTATCTTTGGA+GGG 0.495002 tig0019363:-129454 Msa1373170:CDS
CAGGGCTCAGGTGGCGTGTG+GGG 0.498458 tig0019363:-125495 Msa1373170:CDS
CTTCAATTCAAACTTAACTT+GGG 0.499993 tig0019363:+134384 None:intergenic
ACTAGAATCATCACTCAGTA+AGG 0.502282 tig0019363:-126616 Msa1373170:CDS
GCAAAACAGAGGCAGGGCTC+AGG 0.503036 tig0019363:-125507 Msa1373170:CDS
CATAATATTATTATTAGTTG+AGG 0.508426 tig0019363:-134439 Msa1373170:five_prime_UTR
TCATCATCTGCATTCTGGCC+AGG 0.509974 tig0019363:+125456 None:intergenic
TTGAACCAGTAATTGAGAAT+GGG 0.511798 tig0019363:-131869 Msa1373170:CDS
GGCAGAAACACTGTCTGGTA+TGG 0.512137 tig0019363:+127374 None:intergenic
TGATGCAGTTGGAACCAGCT+TGG 0.513159 tig0019363:-132610 Msa1373170:intron
TACTTACTTATCTTTGGAGG+GGG 0.514190 tig0019363:-129452 Msa1373170:CDS
TAAAAGTAGTTACCTTGTAA+AGG 0.514368 tig0019363:+126532 None:intergenic
TTCTGCAGGGGCTTCAGAGA+CGG 0.519356 tig0019363:-127832 Msa1373170:intron
TGAATATGGCTACCCTGGCT+TGG 0.523714 tig0019363:-127803 Msa1373170:CDS
TCAGTGGTAACATCTGTTCA+AGG 0.525727 tig0019363:-127780 Msa1373170:CDS
CATGAAGATCACTAAGATAA+CGG 0.527182 tig0019363:+131529 None:intergenic
GAGAACTGGTTCATTGTTGG+TGG 0.528590 tig0019363:-129221 Msa1373170:CDS
AACTGGTTCATTGTTGGTGG+CGG 0.528677 tig0019363:-129218 Msa1373170:CDS
TGGAAGACATGTTTCCAAGC+TGG 0.531427 tig0019363:+132596 None:intergenic
TGGAATCTCACCTTGTTGTG+TGG 0.532017 tig0019363:+129280 None:intergenic
CTATGTCACTACAGATTGCA+TGG 0.533076 tig0019363:-131100 Msa1373170:intron
GAATTTGGAGCAGGACATGA+AGG 0.533920 tig0019363:-127312 Msa1373170:CDS
GTCAAGGTGTTTCAAACTTG+AGG 0.536182 tig0019363:-126099 Msa1373170:intron
AAGAGCCAAAACCTCATATC+GGG 0.537648 tig0019363:+131698 None:intergenic
ATCAGAAATGTCGATGGCGA+TGG 0.538481 tig0019363:-134325 Msa1373170:exon
GAGATTCCAACGCCACGTGC+AGG 0.540331 tig0019363:-129266 Msa1373170:CDS
GCGTGTTTCTGTTGCTAGTG+AGG 0.541577 tig0019363:-127757 Msa1373170:intron
AATTGTGGAGCATAGCAAAT+GGG 0.542441 tig0019363:-133095 Msa1373170:CDS
TTTAGCTTCTATTTGGGCGG+AGG 0.543422 tig0019363:-125320 Msa1373170:three_prime_UTR
TGGAGCATAGCAAATGGGCC+AGG 0.543498 tig0019363:-133090 Msa1373170:intron
TCAAAGCTTGAGGTTAAGGC+TGG 0.545236 tig0019363:-131263 Msa1373170:CDS
AAACAGAGGCAGGGCTCAGG+TGG 0.548572 tig0019363:-125504 Msa1373170:CDS
ATGCTTTCTAGGTATCACTT+GGG 0.551411 tig0019363:-130045 Msa1373170:intron
GGACGTTGACCAGATATTGG+AGG 0.551930 tig0019363:+131726 None:intergenic
ACGTCCAAAAGCCCGATATG+AGG 0.553043 tig0019363:-131709 Msa1373170:intron
GATAAAGATGTTGTTATGGA+AGG 0.553076 tig0019363:-131786 Msa1373170:CDS
CTGGACTTGGTCAAAGCTTG+AGG 0.558338 tig0019363:-131273 Msa1373170:CDS
AAATTCAGATCCTGTATCGC+GGG 0.560039 tig0019363:+127329 None:intergenic
GCAGCGGTATGATCAGACCT+TGG 0.560127 tig0019363:+129491 None:intergenic
GATAAATTGTACATATATGG+TGG 0.560376 tig0019363:-131564 Msa1373170:CDS
ACAGGATCTGAATTTGGAGC+AGG 0.561532 tig0019363:-127321 Msa1373170:CDS
TTGTCATTTCAGGCTAGTGT+AGG 0.561898 tig0019363:-133151 Msa1373170:intron
ATGTAAATCATTGTAGCAAG+TGG 0.562384 tig0019363:+129421 None:intergenic
ACAACTTTGGATCCATGTGC+TGG 0.563526 tig0019363:-131227 Msa1373170:CDS
ACGCCACGTGCAGGACATGC+TGG 0.566577 tig0019363:-129257 Msa1373170:CDS
ACCAAAGAATGGCCAGCACA+TGG 0.572956 tig0019363:+131215 None:intergenic
ATACTTACTTATCTTTGGAG+GGG 0.575466 tig0019363:-129453 Msa1373170:CDS
GGCTACCCTGGCTTGGTCAG+TGG 0.575689 tig0019363:-127796 Msa1373170:CDS
TGCTTTCTAGGTATCACTTG+GGG 0.576352 tig0019363:-130044 Msa1373170:intron
CTCCAAAGATAAGTAAGTAT+CGG 0.576573 tig0019363:+129456 None:intergenic
GCGGAGTGCCTCCTTCCCCA+AGG 0.579224 tig0019363:-129508 Msa1373170:CDS
GGGACGGCAGAAACACTGTC+TGG 0.580029 tig0019363:+127369 None:intergenic
TGATCTCATATCAGTCCTGA+AGG 0.580681 tig0019363:-126652 Msa1373170:CDS
ATTGTTGTTCAGTTAAGCCA+AGG 0.581686 tig0019363:+125428 None:intergenic
CTGGTTTGCAATATCCAGAA+CGG 0.583439 tig0019363:-134290 Msa1373170:CDS
TATGTCACTACAGATTGCAT+GGG 0.589491 tig0019363:-131099 Msa1373170:intron
TAATAACTCTGACCTTTACA+AGG 0.591192 tig0019363:-126544 Msa1373170:intron
AGCCAATAAATAACATAACA+TGG 0.591206 tig0019363:-134554 Msa1373170:five_prime_UTR
AGCATTTGTAGCATTTGGGA+CGG 0.593329 tig0019363:+127353 None:intergenic
TCATACCGCTGCTGTACATG+TGG 0.596367 tig0019363:-129480 Msa1373170:CDS
ACCCAGTTCATGGAAAATTG+TGG 0.599258 tig0019363:-133110 Msa1373170:CDS
TGATCAGACCTTGGGGAAGG+AGG 0.599374 tig0019363:+129500 None:intergenic
GGAATCTCACCTTGTTGTGT+GGG 0.600090 tig0019363:+129281 None:intergenic
TACGCTGCGGCATCTTACGT+CGG 0.601399 tig0019363:-134264 Msa1373170:CDS
TCTTCAACTAAAGCAAGAGC+TGG 0.604945 tig0019363:-126580 Msa1373170:CDS
GATCCTTCCGAAAGTATCCA+AGG 0.604958 tig0019363:-131041 Msa1373170:intron
GCTGATGACTGTATTCAAAG+TGG 0.605954 tig0019363:-125234 Msa1373170:three_prime_UTR
CAGTGGTAACATCTGTTCAA+GGG 0.607684 tig0019363:-127779 Msa1373170:CDS
ATACCTTGGATACTTTCGGA+AGG 0.608008 tig0019363:+131038 None:intergenic
GTTGTGTAGGAAGAAGATCC+TGG 0.609571 tig0019363:-132455 Msa1373170:intron
GGACATGCTGGTGTGACAGT+AGG 0.609684 tig0019363:-129245 Msa1373170:CDS
TGGAAATCAAGTTGGAACAC+AGG 0.610735 tig0019363:-131808 Msa1373170:CDS
TGGACTTGGAAACCATGACA+TGG 0.612583 tig0019363:-129813 Msa1373170:CDS
TGTACTGAATATGGCTACCC+TGG 0.613350 tig0019363:-127808 Msa1373170:CDS
GCTATAGAGAAGAAGAGCGG+TGG 0.614400 tig0019363:+134188 None:intergenic
TGCAGATGATGAATGAACCT+TGG 0.618446 tig0019363:-125445 Msa1373170:exon
ACATGGATCCAAAGTTGTAG+AGG 0.619016 tig0019363:+131232 None:intergenic
TTGGTGGGCAAGATGCAAAG+AGG 0.621524 tig0019363:-129861 Msa1373170:CDS
TGGTCTCGTCCCACACAACA+AGG 0.621932 tig0019363:-129290 Msa1373170:CDS
AGATTTAGCTTCTATTTGGG+CGG 0.624912 tig0019363:-125323 Msa1373170:three_prime_UTR
TTTCCAAGTCCAGAATATGC+AGG 0.626613 tig0019363:+129824 None:intergenic
ATAATAATCAGAAATGTCGA+TGG 0.631937 tig0019363:-134331 Msa1373170:exon
GATGCTCTTGAATACCAACC+AGG 0.635858 tig0019363:+132437 None:intergenic
GGTATCATACAGAAATCCAA+AGG 0.637667 tig0019363:-126675 Msa1373170:intron
TGTAGGAAGAAGATCCTGGT+TGG 0.638077 tig0019363:-132451 Msa1373170:intron
GTATGATCAGACCTTGGGGA+AGG 0.639783 tig0019363:+129497 None:intergenic
ATTATAGTATGATATAGTGA+AGG 0.640204 tig0019363:-125277 Msa1373170:three_prime_UTR
AAGGTCAGAGTTATTAGACT+CGG 0.646046 tig0019363:+126551 None:intergenic
ACACCAGCATGTCCTGCACG+TGG 0.646357 tig0019363:+129254 None:intergenic
GGACTTGGAAACCATGACAT+GGG 0.651250 tig0019363:-129812 Msa1373170:CDS
CAAATTCAGATCCTGTATCG+CGG 0.652255 tig0019363:+127328 None:intergenic
TTAAGTGCAAAACAGAGGCA+GGG 0.653026 tig0019363:-125513 Msa1373170:CDS
CATACTATAATCCTCATGTG+TGG 0.653100 tig0019363:+125289 None:intergenic
TACTAAGGTATTCCCGACAA+GGG 0.657707 tig0019363:+129888 None:intergenic
TGTTACCACTGACCAAGCCA+GGG 0.658834 tig0019363:+127791 None:intergenic
TTACTAAGGTATTCCCGACA+AGG 0.660142 tig0019363:+129887 None:intergenic
ACATGCTGGTGTGACAGTAG+GGG 0.662631 tig0019363:-129243 Msa1373170:CDS
CTGCTTTAAGTGCAAAACAG+AGG 0.668188 tig0019363:-125518 Msa1373170:CDS
TCCAGAACGGTTCTACGCTG+CGG 0.674199 tig0019363:-134277 Msa1373170:CDS
AATTTGGAGCAGGACATGAA+GGG 0.680238 tig0019363:-127311 Msa1373170:CDS
AGCGGTATGATCAGACCTTG+GGG 0.686103 tig0019363:+129493 None:intergenic
TCGGTCCACATGTACAGCAG+CGG 0.693231 tig0019363:+129475 None:intergenic
ATATATGGTGGAAATCACAA+TGG 0.695684 tig0019363:-131552 Msa1373170:CDS
TGTTGTATAAGAGTTATCCA+CGG 0.709908 tig0019363:+127272 None:intergenic
TAGGAGCTCCAATCAGTACG+TGG 0.711841 tig0019363:-126140 Msa1373170:CDS
ATGTCACTACAGATTGCATG+GGG 0.712245 tig0019363:-131098 Msa1373170:intron
TAAGCTATAGAGAAGAAGAG+CGG 0.722916 tig0019363:+134185 None:intergenic
AGGAGCTTGAACTCCTCCAG+CGG 0.723909 tig0019363:-125563 Msa1373170:CDS
GGTGGCGGTGACAACAAGAG+CGG 0.739017 tig0019363:-129203 Msa1373170:intron
GCTTTGTAGATATCACGTGG+AGG 0.759420 tig0019363:-129922 Msa1373170:intron
GATGCTTTGTAGATATCACG+TGG 0.778850 tig0019363:-129925 Msa1373170:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAATAAAATTAAAA+AGG - tig0019363:133322-133341 Msa1373170:intron 0.0%
!! AAATAAAATAAAATTAAAAA+GGG - tig0019363:133323-133342 Msa1373170:intron 0.0%
!! AACTTCAAAAATATATAAAT+GGG - tig0019363:126844-126863 Msa1373170:intron 10.0%
!!! TGATATTTTTTTTAACTAAA+TGG - tig0019363:128426-128445 Msa1373170:intron 10.0%
!!! ATTTTTTTTCTTTAATATCT+AGG - tig0019363:130051-130070 Msa1373170:intron 10.0%
!!! TTTTTTTTCTTTAATATCTA+GGG - tig0019363:130052-130071 Msa1373170:intron 10.0%
!! CAAATAAAAATAAAATGAAA+AGG - tig0019363:131566-131585 Msa1373170:CDS 10.0%
!!! TTAAAATTCCATTTTTATTT+TGG - tig0019363:133245-133264 Msa1373170:intron 10.0%
!! TTATTGTGTATTAATTAATT+CGG - tig0019363:134385-134404 Msa1373170:five_prime_UTR 10.0%
!! CATAATATTATTATTAGTTG+AGG - tig0019363:125312-125331 Msa1373170:three_prime_UTR 15.0%
!!! TGGTTTATTTAGTTATTTTT+GGG - tig0019363:126499-126518 Msa1373170:intron 15.0%
!! CAACTTCAAAAATATATAAA+TGG - tig0019363:126843-126862 Msa1373170:intron 15.0%
!! ACTTCAAAAATATATAAATG+GGG - tig0019363:126845-126864 Msa1373170:intron 15.0%
!! ATTATTATGCAATTATCTTA+TGG - tig0019363:127005-127024 Msa1373170:intron 15.0%
!!! ATACTAATTCTGTAATATTT+TGG - tig0019363:128620-128639 Msa1373170:intron 15.0%
!! TACATTAATATATTATACCT+TGG + tig0019363:128730-128749 None:intergenic 15.0%
!!! TAATGTGTTATAATTCTTTT+AGG - tig0019363:128751-128770 Msa1373170:intron 15.0%
!!! AATGTGTTATAATTCTTTTA+GGG - tig0019363:128752-128771 Msa1373170:intron 15.0%
!! ACAAAGAAATAAAAAATGAA+AGG + tig0019363:129632-129651 None:intergenic 15.0%
!!! TAAATTGGATTTTGTAAAAT+TGG - tig0019363:130773-130792 Msa1373170:intron 15.0%
!! TTAAAAATAATAACTGACAA+TGG + tig0019363:131115-131134 None:intergenic 15.0%
!!! GAATTTTATTTGATATAAGA+TGG + tig0019363:131330-131349 None:intergenic 15.0%
!! AATATAGTAATTCTCTAAAT+GGG - tig0019363:131396-131415 Msa1373170:intron 15.0%
!! AAACAAAACAAGAATTTATT+TGG + tig0019363:131636-131655 None:intergenic 15.0%
!!! ATAAATTCTTGTTTTGTTTA+TGG - tig0019363:131637-131656 Msa1373170:intron 15.0%
!! AAAAAGATGTATATTAACTT+AGG + tig0019363:131878-131897 None:intergenic 15.0%
!!! TTTTAATTATGTTAATCAGT+GGG + tig0019363:132109-132128 None:intergenic 15.0%
!!! ATTTTAATTATGTTAATCAG+TGG + tig0019363:132110-132129 None:intergenic 15.0%
!!! TATGGAATTTTCAATTATTT+TGG + tig0019363:132362-132381 None:intergenic 15.0%
!! ATGATTGAAGAAAATTTATT+TGG - tig0019363:133754-133773 Msa1373170:intron 15.0%
!! AACTTAAAAATATATATTCG+AGG - tig0019363:134079-134098 Msa1373170:intron 15.0%
!! ACTTAAAAATATATATTCGA+GGG - tig0019363:134080-134099 Msa1373170:intron 15.0%
!!! ATCCATGTTATGTTATTTAT+TGG + tig0019363:125202-125221 None:intergenic 20.0%
!!! GTATGAATTTTCTGAAATTT+TGG - tig0019363:125951-125970 Msa1373170:intron 20.0%
!!! ATGTAATAATGTTGATTTAC+TGG - tig0019363:126448-126467 Msa1373170:intron 20.0%
!!! GTGGTTTATTTAGTTATTTT+TGG - tig0019363:126498-126517 Msa1373170:intron 20.0%
!! TGCATAATAATATAAATGCT+TGG + tig0019363:126996-127015 None:intergenic 20.0%
!!! TTTTTTTAACATTTCTTCCT+TGG - tig0019363:127227-127246 Msa1373170:intron 20.0%
!! CAATATATTACATTATACCA+AGG + tig0019363:127247-127266 None:intergenic 20.0%
!! AAATAAAAACGAAAGTAATC+AGG + tig0019363:127270-127289 None:intergenic 20.0%
!!! TTTATTTTCTTTTGTTGTGT+AGG - tig0019363:127283-127302 Msa1373170:CDS 20.0%
!!! CAAGTAAGAAATCAATATTT+TGG - tig0019363:127543-127562 Msa1373170:intron 20.0%
!! TAGAAATAGATTCATTTAAG+AGG - tig0019363:127708-127727 Msa1373170:intron 20.0%
!! CAAGATAAATTGTACATATA+TGG - tig0019363:128184-128203 Msa1373170:intron 20.0%
!! TGAAATAATAGTTTATCTTG+TGG - tig0019363:128292-128311 Msa1373170:intron 20.0%
!! GAAATAATAGTTTATCTTGT+GGG - tig0019363:128293-128312 Msa1373170:intron 20.0%
!! AAATAATAGTTTATCTTGTG+GGG - tig0019363:128294-128313 Msa1373170:intron 20.0%
!! TACAATTACTTTCAAAATTG+TGG + tig0019363:128331-128350 None:intergenic 20.0%
!!! TTAACTTGGTCAATATAAAA+GGG + tig0019363:128397-128416 None:intergenic 20.0%
!!! TAATTCTGTAATATTTTGGT+CGG - tig0019363:128624-128643 Msa1373170:intron 20.0%
!!! ATGTGTTATAATTCTTTTAG+GGG - tig0019363:128753-128772 Msa1373170:intron 20.0%
!!! TATAGATAGTTTTAGAGAAT+AGG + tig0019363:128970-128989 None:intergenic 20.0%
!! GAACTAAGGATAATATTATT+AGG + tig0019363:129010-129029 None:intergenic 20.0%
!!! TTAATACTACTAGTTTATCT+TGG + tig0019363:129411-129430 None:intergenic 20.0%
!! GTATTAATAAGTGACTTATT+TGG - tig0019363:129424-129443 Msa1373170:CDS 20.0%
!! GACAAATATATCTAGTAATT+TGG - tig0019363:129456-129475 Msa1373170:CDS 20.0%
!!! AGACTGTTTTTTATTTGAAA+GGG - tig0019363:129497-129516 Msa1373170:CDS 20.0%
!! AGAAAAAATGAGTGAAAAAA+GGG + tig0019363:129744-129763 None:intergenic 20.0%
!! AAGAAAAAATGAGTGAAAAA+AGG + tig0019363:129745-129764 None:intergenic 20.0%
!!! TTTTAACTTATCAGAACTAT+GGG - tig0019363:130019-130038 Msa1373170:intron 20.0%
!! TTTAAATCTAAGTGATAAAG+CGG + tig0019363:130586-130605 None:intergenic 20.0%
!! AATATTTGTTCAACATATCT+AGG + tig0019363:130652-130671 None:intergenic 20.0%
!!! AAACATGATTTTCACTAAAT+TGG - tig0019363:130758-130777 Msa1373170:intron 20.0%
!!! ATAAAAAATAGCTTTTGCAT+TGG + tig0019363:130894-130913 None:intergenic 20.0%
!! AATATGATTTAATGCATGTT+TGG + tig0019363:131030-131049 None:intergenic 20.0%
!! GAATATAGTAATTCTCTAAA+TGG - tig0019363:131395-131414 Msa1373170:intron 20.0%
!!! AAGTATTCCTGTAATATTTT+CGG - tig0019363:131468-131487 Msa1373170:intron 20.0%
!! AATATCCTTTGATAAGTTAT+AGG + tig0019363:131527-131546 None:intergenic 20.0%
!! TTTATTTGATTAACAAACTC+AGG + tig0019363:131554-131573 None:intergenic 20.0%
!! ATAAAATGAAAAGGCTTATT+AGG - tig0019363:131575-131594 Msa1373170:CDS 20.0%
!!! TTGGTTTTATACTTTTAGAT+TGG - tig0019363:131713-131732 Msa1373170:CDS 20.0%
!! CTTTAAATTTATCTACTCTA+AGG - tig0019363:131787-131806 Msa1373170:CDS 20.0%
!! TTAGAAAAGAATTATGTTCA+TGG - tig0019363:132605-132624 Msa1373170:CDS 20.0%
!! TATAAAATTAGTCAGATCTT+TGG + tig0019363:132854-132873 None:intergenic 20.0%
!!! AAGATCTGACTAATTTTATA+TGG - tig0019363:132854-132873 Msa1373170:intron 20.0%
!!! AGATCTGACTAATTTTATAT+GGG - tig0019363:132855-132874 Msa1373170:intron 20.0%
!! GACTAAATCCAAAATAAAAA+TGG + tig0019363:133256-133275 None:intergenic 20.0%
!! ATTGATCTTATTGTTATCAA+AGG - tig0019363:133562-133581 Msa1373170:intron 20.0%
!! AAAGAAATATTCTTATCATG+AGG + tig0019363:133850-133869 None:intergenic 20.0%
!! AAATAATTCTTTGCAAAACT+GGG - tig0019363:133871-133890 Msa1373170:intron 20.0%
!!! TTTGTAATGTTCCAAAATTT+TGG + tig0019363:134168-134187 None:intergenic 20.0%
!!! AAATTTTGGAACATTACAAA+AGG - tig0019363:134168-134187 Msa1373170:intron 20.0%
!!! AATAAGATTTAGCTTCTATT+TGG - tig0019363:134424-134443 Msa1373170:five_prime_UTR 20.0%
!!! ATAAGATTTAGCTTCTATTT+GGG - tig0019363:134425-134444 Msa1373170:five_prime_UTR 20.0%
!! ATTATAGTATGATATAGTGA+AGG - tig0019363:134474-134493 Msa1373170:five_prime_UTR 20.0%
! AGCCAATAAATAACATAACA+TGG - tig0019363:125197-125216 Msa1373170:three_prime_UTR 25.0%
!!! TCTGATTTTGATTATTCAGA+GGG + tig0019363:125346-125365 None:intergenic 25.0%
!!! ATCTGATTTTGATTATTCAG+AGG + tig0019363:125347-125366 None:intergenic 25.0%
! CTTCAATTCAAACTTAACTT+GGG + tig0019363:125370-125389 None:intergenic 25.0%
! TCTTCAATTCAAACTTAACT+TGG + tig0019363:125371-125390 None:intergenic 25.0%
!! TGAATTGAAGAGTTTTCAAT+TGG - tig0019363:125380-125399 Msa1373170:three_prime_UTR 25.0%
! ATAATAATCAGAAATGTCGA+TGG - tig0019363:125420-125439 Msa1373170:three_prime_UTR 25.0%
! TTAGATGTAAGAGATTTAGT+TGG + tig0019363:125532-125551 None:intergenic 25.0%
!!! CTATGTGATTTTGATTTTCA+TGG - tig0019363:125654-125673 Msa1373170:intron 25.0%
! TTTACTTACTTTCTTTGTGT+TGG - tig0019363:125729-125748 Msa1373170:intron 25.0%
! CAAATCTACTATGTTATGTT+AGG + tig0019363:125890-125909 None:intergenic 25.0%
! TTCAGAAAATTCATACAGAT+CGG + tig0019363:125947-125966 None:intergenic 25.0%
!! AGTCAAACTGTTTTCATATA+AGG - tig0019363:126126-126145 Msa1373170:CDS 25.0%
!! ATATAAGGTATAAGCTTTTC+AGG - tig0019363:126141-126160 Msa1373170:intron 25.0%
!!! AAGTTATTTTGGAGTGATTA+TGG - tig0019363:126165-126184 Msa1373170:intron 25.0%
! AATAAGCGGAAAATAGTTTA+TGG - tig0019363:126189-126208 Msa1373170:intron 25.0%
! CATTAAACCTTTATCTTCTA+TGG - tig0019363:126745-126764 Msa1373170:intron 25.0%
! TAGAACTCAATGAGTTTAAA+TGG + tig0019363:126823-126842 None:intergenic 25.0%
! CAATGCAAACATATAGAATA+TGG + tig0019363:126944-126963 None:intergenic 25.0%
!! TCTATATGTTTGCATTGATA+TGG - tig0019363:126947-126966 Msa1373170:intron 25.0%
! TCTCGAGAATATTGTTAAAT+TGG - tig0019363:127111-127130 Msa1373170:intron 25.0%
!! TCTTTTTGTGAAAATATTGG+AGG - tig0019363:127191-127210 Msa1373170:intron 25.0%
!!! ATATTTTGGCCAATAGAATT+CGG - tig0019363:127557-127576 Msa1373170:CDS 25.0%
!! CATTTTCAGATTTCATGATA+TGG - tig0019363:127667-127686 Msa1373170:intron 25.0%
! GTTAATAGTGACAACAAAAA+TGG + tig0019363:127789-127808 None:intergenic 25.0%
!! AAAACTATTTCCTCTGAAAA+TGG - tig0019363:127923-127942 Msa1373170:intron 25.0%
! GATAAATTGTACATATATGG+TGG - tig0019363:128187-128206 Msa1373170:intron 25.0%
! TTAAATATCTTTGTTGCATG+AGG - tig0019363:128255-128274 Msa1373170:intron 25.0%
! TCTGTTCATAACACAAAATA+TGG + tig0019363:128357-128376 None:intergenic 25.0%
!! CTTAACTTGGTCAATATAAA+AGG + tig0019363:128398-128417 None:intergenic 25.0%
! TATCAACACATAACTTAACT+TGG + tig0019363:128411-128430 None:intergenic 25.0%
! AACTAAATGGAAACAAATAC+AGG - tig0019363:128439-128458 Msa1373170:intron 25.0%
! GTTTAATACAAACCAAAGAA+TGG + tig0019363:128550-128569 None:intergenic 25.0%
! TATTATACCTTGGATACTTT+CGG + tig0019363:128720-128739 None:intergenic 25.0%
!!! TTATAATTCTTTTAGGGGTT+GGG - tig0019363:128758-128777 Msa1373170:intron 25.0%
! TAAATGAAAATGTGAGGAAT+AGG - tig0019363:128795-128814 Msa1373170:intron 25.0%
! AAATGAAAATGTGAGGAATA+GGG - tig0019363:128796-128815 Msa1373170:intron 25.0%
!! CATTAGAAGAGTTATCTTTT+TGG - tig0019363:128840-128859 Msa1373170:intron 25.0%
! TGTTAAATATTATGACAGTG+AGG - tig0019363:129162-129181 Msa1373170:intron 25.0%
! GTTAAATATTATGACAGTGA+GGG - tig0019363:129163-129182 Msa1373170:intron 25.0%
! TAAACATAATAGACACATAC+CGG + tig0019363:129242-129261 None:intergenic 25.0%
! TGCTAAAGATGCTTATAAAA+AGG + tig0019363:129308-129327 None:intergenic 25.0%
!!! GAGACTGTTTTTTATTTGAA+AGG - tig0019363:129496-129515 Msa1373170:CDS 25.0%
!!! GACTGTTTTTTATTTGAAAG+GGG - tig0019363:129498-129517 Msa1373170:CDS 25.0%
!!! GTTTTAACTTATCAGAACTA+TGG - tig0019363:130018-130037 Msa1373170:intron 25.0%
!! TTTAACTTATCAGAACTATG+GGG - tig0019363:130020-130039 Msa1373170:intron 25.0%
!! TTTTTCTTTAATATCTAGGG+AGG - tig0019363:130055-130074 Msa1373170:intron 25.0%
! TCATCAAACAATGTTCTATA+AGG + tig0019363:130117-130136 None:intergenic 25.0%
!! CATCTTTGTTTATGCAATAT+TGG - tig0019363:130138-130157 Msa1373170:intron 25.0%
!!! AGTTTTTTTCCTCTTTTGAA+TGG + tig0019363:130174-130193 None:intergenic 25.0%
! TGTTCTAACTAAGTAATAAC+TGG - tig0019363:130218-130237 Msa1373170:intron 25.0%
!! GATTTAAATTTTCTGCATTG+AGG - tig0019363:130598-130617 Msa1373170:intron 25.0%
!! TAGGAATATTTTGTATAGTG+TGG + tig0019363:130633-130652 None:intergenic 25.0%
! AACCAAATAAGTGTGTATTT+AGG - tig0019363:130723-130742 Msa1373170:intron 25.0%
!! TGGATTTTGTAAAATTGGTT+TGG - tig0019363:130778-130797 Msa1373170:intron 25.0%
!!! TTTTACATCAAACTTGCTTT+TGG + tig0019363:130852-130871 None:intergenic 25.0%
!!! GATTTCAAGTCTTTTAAACA+TGG - tig0019363:131002-131021 Msa1373170:intron 25.0%
!!! TTTACCCATTTTAGAAGATT+GGG + tig0019363:131180-131199 None:intergenic 25.0%
!!! TTTTACCCATTTTAGAAGAT+TGG + tig0019363:131181-131200 None:intergenic 25.0%
! ACATATATGTTCAACATTAG+TGG - tig0019363:131201-131220 Msa1373170:intron 25.0%
!! TCTATAGTTTTTATTCCACA+AGG + tig0019363:131300-131319 None:intergenic 25.0%
!! AATACTTTTATTCCCTCATA+AGG + tig0019363:131455-131474 None:intergenic 25.0%
! TTAAGTTCCGAAAATATTAC+AGG + tig0019363:131478-131497 None:intergenic 25.0%
!!! ATTCTTGTTTTGTTTATGGA+TGG - tig0019363:131641-131660 Msa1373170:intron 25.0%
!! AATAATTGCTTCTGAAAGAT+TGG - tig0019363:131694-131713 Msa1373170:intron 25.0%
!!! TGTGAATTTACTGATTTTTC+TGG - tig0019363:131825-131844 Msa1373170:CDS 25.0%
!!! GTGAATTTACTGATTTTTCT+GGG - tig0019363:131826-131845 Msa1373170:CDS 25.0%
! ATTAAAATGTCTGTCATTAC+AGG - tig0019363:132122-132141 Msa1373170:intron 25.0%
! TTAAAATGTCTGTCATTACA+GGG - tig0019363:132123-132142 Msa1373170:intron 25.0%
! TTGGTTGTAAGTTCATATAA+TGG - tig0019363:132153-132172 Msa1373170:intron 25.0%
!!! TTCAATTATTTTGGATTGCA+AGG + tig0019363:132353-132372 None:intergenic 25.0%
! AAAAAACTGCTTCATAAAAC+TGG + tig0019363:132540-132559 None:intergenic 25.0%
!! TCTAACAAGATTCATTTTCT+TGG - tig0019363:132634-132653 Msa1373170:intron 25.0%
! TACAATTTAGATTCTCTGAA+AGG + tig0019363:132808-132827 None:intergenic 25.0%
! TCAGAGAATCTAAATTGTAT+TGG - tig0019363:132809-132828 Msa1373170:intron 25.0%
! ACCTTTCATTTGCATTAATA+AGG - tig0019363:132906-132925 Msa1373170:intron 25.0%
! TAAAAGTAGTTACCTTGTAA+AGG + tig0019363:133222-133241 None:intergenic 25.0%
! CTGAATAGATAATAAACACA+AGG + tig0019363:133411-133430 None:intergenic 25.0%
! GGATTAACTCATTTAATTGT+TGG + tig0019363:133829-133848 None:intergenic 25.0%
! CAAATAATTCTTTGCAAAAC+TGG - tig0019363:133870-133889 Msa1373170:intron 25.0%
! ACTCTACTATATGATAAGTT+AGG - tig0019363:133947-133966 Msa1373170:intron 25.0%
! CTATATGATAAGTTAGGTAT+TGG - tig0019363:133953-133972 Msa1373170:intron 25.0%
!! CTGACTTTGATTTAAAATTG+TGG - tig0019363:134010-134029 Msa1373170:intron 25.0%
AAGAGATTTAGTTGGAGAAT+TGG + tig0019363:125524-125543 None:intergenic 30.0%
TCTCTATAGCTTATATCAAC+AGG - tig0019363:125576-125595 Msa1373170:CDS 30.0%
TGATCCGTGTTATGAAAATT+AGG - tig0019363:125848-125867 Msa1373170:intron 30.0%
!!! CTGAAATTTTGGTTTTCGTT+AGG - tig0019363:125962-125981 Msa1373170:intron 30.0%
!!! GCTTTTCAGGTAAGTTATTT+TGG - tig0019363:126154-126173 Msa1373170:intron 30.0%
TCAAATAAGCTAATCCAAAC+AGG - tig0019363:126280-126299 Msa1373170:intron 30.0%
! TTTGTTGTGTTATCGTTCTA+TGG - tig0019363:126522-126541 Msa1373170:intron 30.0%
TTGATCAATGAAACGAATCA+AGG + tig0019363:126568-126587 None:intergenic 30.0%
GTTTAAAAAGCAAACAAACC+TGG + tig0019363:126682-126701 None:intergenic 30.0%
ATAGTAACAGCACATAAAAG+CGG + tig0019363:126718-126737 None:intergenic 30.0%
ACCTTTATCTTCTATGGATT+TGG - tig0019363:126751-126770 Msa1373170:intron 30.0%
TCCAAATCCATAGAAGATAA+AGG + tig0019363:126755-126774 None:intergenic 30.0%
TCTCACCATTAAAACTCATT+GGG + tig0019363:126871-126890 None:intergenic 30.0%
ATCTCACCATTAAAACTCAT+TGG + tig0019363:126872-126891 None:intergenic 30.0%
ATGTTTAAATCCAACATGAG+AGG + tig0019363:126907-126926 None:intergenic 30.0%
ATGTTGGATTTAAACATGAG+AGG - tig0019363:126910-126929 Msa1373170:intron 30.0%
! TTTGCATTGATATGGAATTC+TGG - tig0019363:126955-126974 Msa1373170:intron 30.0%
! TATTTTCACAAAAAGACGCA+TGG + tig0019363:127187-127206 None:intergenic 30.0%
! GCGTCTTTTTGTGAAAATAT+TGG - tig0019363:127188-127207 Msa1373170:intron 30.0%
TTCATTTGAACGTCTATTAC+AGG + tig0019363:127356-127375 None:intergenic 30.0%
!! AATACTGAGTCTTGTTCTTT+CGG - tig0019363:127401-127420 Msa1373170:CDS 30.0%
! CACGATATGGTTTTCATTAT+TGG - tig0019363:127515-127534 Msa1373170:intron 30.0%
!!! TATTTTGGCCAATAGAATTC+GGG - tig0019363:127558-127577 Msa1373170:CDS 30.0%
TTAGTTGCATGAATTGTTTG+CGG + tig0019363:127620-127639 None:intergenic 30.0%
! ATTTCTAAAGATCAAACCCT+TGG + tig0019363:127695-127714 None:intergenic 30.0%
TGACAACAAAAATGGAGAAT+AGG + tig0019363:127781-127800 None:intergenic 30.0%
AGACATTGGAAACAAAGAAA+CGG + tig0019363:127825-127844 None:intergenic 30.0%
TTGAACCAGTAATTGAGAAT+GGG - tig0019363:127882-127901 Msa1373170:intron 30.0%
! AACTTGATTTCCATTTTCAG+AGG + tig0019363:127936-127955 None:intergenic 30.0%
TCTGAAAATGGAAATCAAGT+TGG - tig0019363:127935-127954 Msa1373170:intron 30.0%
ACAGGATAAAGATGTTGTTA+TGG - tig0019363:127961-127980 Msa1373170:intron 30.0%
GATAAAGATGTTGTTATGGA+AGG - tig0019363:127965-127984 Msa1373170:intron 30.0%
! ATATATGGTGGAAATCACAA+TGG - tig0019363:128199-128218 Msa1373170:intron 30.0%
CATGAAGATCACTAAGATAA+CGG + tig0019363:128225-128244 None:intergenic 30.0%
! ATGGAAACAAATACAGGTTT+TGG - tig0019363:128445-128464 Msa1373170:intron 30.0%
TATAAGCAATCGACAAGAAA+TGG + tig0019363:128603-128622 None:intergenic 30.0%
!! GTTATAATTCTTTTAGGGGT+TGG - tig0019363:128757-128776 Msa1373170:intron 30.0%
TGTGCTTAAATGAAAATGTG+AGG - tig0019363:128789-128808 Msa1373170:intron 30.0%
GAGATCAAATTGATGAACTA+AGG + tig0019363:129024-129043 None:intergenic 30.0%
!!! ACTGCTGTTTTTTGTATTGT+TGG - tig0019363:129099-129118 Msa1373170:intron 30.0%
TTTGTGATTGCAACTAAGTA+TGG - tig0019363:129132-129151 Msa1373170:intron 30.0%
TTGTGATTGCAACTAAGTAT+GGG - tig0019363:129133-129152 Msa1373170:intron 30.0%
ATGCTTATAAAAAGGACAGA+GGG + tig0019363:129300-129319 None:intergenic 30.0%
TTTGAAAGGGGCTTATAATT+AGG - tig0019363:129510-129529 Msa1373170:CDS 30.0%
ATGTGCATTTCTATAACAAG+AGG - tig0019363:129572-129591 Msa1373170:intron 30.0%
AGAGGAAAAAAACTTGAGAA+TGG - tig0019363:130180-130199 Msa1373170:intron 30.0%
CTCCAAAGATAAGTAAGTAT+CGG + tig0019363:130298-130317 None:intergenic 30.0%
GATACTTACTTATCTTTGGA+GGG - tig0019363:130297-130316 Msa1373170:intron 30.0%
! ATACTTACTTATCTTTGGAG+GGG - tig0019363:130298-130317 Msa1373170:intron 30.0%
ATGTAAATCATTGTAGCAAG+TGG + tig0019363:130333-130352 None:intergenic 30.0%
AATTCCTGCAAACAATTAGA+TGG + tig0019363:130429-130448 None:intergenic 30.0%
CACCTAAATACACACTTATT+TGG + tig0019363:130728-130747 None:intergenic 30.0%
!! AAAATAGCTTTTGCATTGGT+TGG + tig0019363:130890-130909 None:intergenic 30.0%
AATAACTGACAATGGAAGTA+TGG + tig0019363:131107-131126 None:intergenic 30.0%
! GTAATCCCTTTTACTGTTTA+AGG - tig0019363:131253-131272 Msa1373170:CDS 30.0%
GAGTACCTTAAACAGTAAAA+GGG + tig0019363:131261-131280 None:intergenic 30.0%
! AGAGTACCTTAAACAGTAAA+AGG + tig0019363:131262-131281 None:intergenic 30.0%
TTTGATAAGTTATAGGTCCT+GGG + tig0019363:131520-131539 None:intergenic 30.0%
AGATCATTGATGCTAACAAT+TGG - tig0019363:131605-131624 Msa1373170:intron 30.0%
GATCATTGATGCTAACAATT+GGG - tig0019363:131606-131625 Msa1373170:intron 30.0%
! TTAGATTGGTTAATAGCTTC+TGG - tig0019363:131727-131746 Msa1373170:CDS 30.0%
!! AATTTATCTACTCTAAGGTG+TGG - tig0019363:131792-131811 Msa1373170:CDS 30.0%
! CTGGGATTTTATGACATTTT+TGG - tig0019363:131844-131863 Msa1373170:CDS 30.0%
! GAAGATGTACTTGTATCTTT+TGG - tig0019363:132177-132196 Msa1373170:intron 30.0%
TGTTGTATAAGAGTTATCCA+CGG + tig0019363:132482-132501 None:intergenic 30.0%
GAGAATCTAAATTGTATTGG+AGG - tig0019363:132812-132831 Msa1373170:intron 30.0%
! GCCTTATTAATGCAAATGAA+AGG + tig0019363:132910-132929 None:intergenic 30.0%
AATGGCACAAATGCATAAAA+TGG + tig0019363:133018-133037 None:intergenic 30.0%
!!! TGCCATTTTATTTTCTATCC+TGG - tig0019363:133031-133050 Msa1373170:intron 30.0%
TGCCAGGATAGAAAATAAAA+TGG + tig0019363:133036-133055 None:intergenic 30.0%
AGTACCTGCTTTAATATTTC+TGG - tig0019363:133055-133074 Msa1373170:intron 30.0%
GATACCAGAAATATTAAAGC+AGG + tig0019363:133062-133081 None:intergenic 30.0%
TAATAACTCTGACCTTTACA+AGG - tig0019363:133207-133226 Msa1373170:intron 30.0%
! ATTTTGGATTTAGTCCAGAA+TGG - tig0019363:133261-133280 Msa1373170:intron 30.0%
TATGATTCTTAGATCCATTC+TGG + tig0019363:133278-133297 None:intergenic 30.0%
!!! GCGTGTTTTTTAATAGAATC+TGG - tig0019363:133721-133740 Msa1373170:intron 30.0%
ACTTATCATATAGTAGAGTC+AGG + tig0019363:133946-133965 None:intergenic 30.0%
AGATTAGATCACAACAATGA+AGG + tig0019363:133986-134005 None:intergenic 30.0%
AAATATATATTTGAGTGCGC+AGG - tig0019363:134114-134133 Msa1373170:intron 30.0%
AATACAGTCATCAGCAAAAA+TGG + tig0019363:134512-134531 None:intergenic 30.0%
TAAGCTATAGAGAAGAAGAG+CGG + tig0019363:125569-125588 None:intergenic 35.0%
CAATGCAGGTAAAAGGAAAA+AGG + tig0019363:125607-125626 None:intergenic 35.0%
! CACGCCTAATTTTCATAACA+CGG + tig0019363:125855-125874 None:intergenic 35.0%
TAATTGCTTCCGACTGATTA+AGG - tig0019363:125910-125929 Msa1373170:intron 35.0%
! GCAAGTTTTCCTTAATCAGT+CGG + tig0019363:125922-125941 None:intergenic 35.0%
GGAGTGATTATGGAAATAAG+CGG - tig0019363:126175-126194 Msa1373170:intron 35.0%
TAGGCACTTGTGAAACTATT+TGG + tig0019363:126245-126264 None:intergenic 35.0%
TTGAACTTACCTACTGACAT+AGG + tig0019363:126264-126283 None:intergenic 35.0%
CTACAACAACTACAAGCTTA+TGG + tig0019363:126307-126326 None:intergenic 35.0%
AGATGAAGTGCACTGAATTA+CGG - tig0019363:126354-126373 Msa1373170:intron 35.0%
ATCGTTCTATGGAATTGAAG+TGG - tig0019363:126533-126552 Msa1373170:intron 35.0%
!! CGTGCTTAATTTGTCATTTC+AGG - tig0019363:126590-126609 Msa1373170:CDS 35.0%
! TCCACAATTTTCCATGAACT+GGG + tig0019363:126645-126664 None:intergenic 35.0%
AAATTGTGGAGCATAGCAAA+TGG - tig0019363:126655-126674 Msa1373170:CDS 35.0%
AATTGTGGAGCATAGCAAAT+GGG - tig0019363:126656-126675 Msa1373170:CDS 35.0%
! TCTTGTTTGAATCCAACATG+AGG - tig0019363:126777-126796 Msa1373170:intron 35.0%
CTTGTTTGAATCCAACATGA+GGG - tig0019363:126778-126797 Msa1373170:intron 35.0%
TGAAAATAACACCCTCATGT+TGG + tig0019363:126792-126811 None:intergenic 35.0%
TGAACATAATCCTCTCATGT+TGG - tig0019363:126894-126913 Msa1373170:intron 35.0%
TTAACAATATTCTCGAGAGC+AGG + tig0019363:127109-127128 None:intergenic 35.0%
! TTGGTAATTACTGATGCAGT+TGG - tig0019363:127130-127149 Msa1373170:intron 35.0%
! GGAGTTGTACTTATGCTTTT+TGG - tig0019363:127422-127441 Msa1373170:CDS 35.0%
!!! TGTACTTATGCTTTTTGGCT+TGG - tig0019363:127427-127446 Msa1373170:CDS 35.0%
!! ATTTTGGCCAATAGAATTCG+GGG - tig0019363:127559-127578 Msa1373170:CDS 35.0%
TACAATACCCCGAATTCTAT+TGG + tig0019363:127569-127588 None:intergenic 35.0%
TAGTTGCATGAATTGTTTGC+GGG + tig0019363:127619-127638 None:intergenic 35.0%
ATTCATGCAACTAAGATAGC+TGG - tig0019363:127626-127645 Msa1373170:intron 35.0%
TTCATGCAACTAAGATAGCT+GGG - tig0019363:127627-127646 Msa1373170:intron 35.0%
ATTTCATGATATGGCACCAA+GGG - tig0019363:127676-127695 Msa1373170:intron 35.0%
GACATTGGAAACAAAGAAAC+GGG + tig0019363:127824-127843 None:intergenic 35.0%
AGAAAGGTAGAATCAGACAT+TGG + tig0019363:127839-127858 None:intergenic 35.0%
AATGTCTGATTCTACCTTTC+TGG - tig0019363:127838-127857 Msa1373170:intron 35.0%
!! CTCAATTACTGGTTCAACTT+TGG + tig0019363:127879-127898 None:intergenic 35.0%
GTTGAACCAGTAATTGAGAA+TGG - tig0019363:127881-127900 Msa1373170:intron 35.0%
! GAGGAAATAGTTTTTGTCTC+TGG + tig0019363:127917-127936 None:intergenic 35.0%
AAATAAACGCACTTGGCTTA+GGG + tig0019363:128140-128159 None:intergenic 35.0%
TATGTCACTACAGATTGCAT+GGG - tig0019363:128652-128671 Msa1373170:intron 35.0%
AGTTACAGTGTATTTCTCCT+CGG - tig0019363:129054-129073 Msa1373170:intron 35.0%
GAACTAGAGTTATAAAACCG+AGG + tig0019363:129074-129093 None:intergenic 35.0%
TTGATCTACAAAGAGCAACA+TGG - tig0019363:129189-129208 Msa1373170:intron 35.0%
GATGCTTATAAAAAGGACAG+AGG + tig0019363:129301-129320 None:intergenic 35.0%
GGCTTATAATTAGGTAGAGA+GGG - tig0019363:129519-129538 Msa1373170:intron 35.0%
AAATGAAAGGAGAAGAGAGA+GGG + tig0019363:129619-129638 None:intergenic 35.0%
AAAATGAAAGGAGAAGAGAG+AGG + tig0019363:129620-129639 None:intergenic 35.0%
! AAGCATACATGATGGAAGAA+GGG + tig0019363:129692-129711 None:intergenic 35.0%
! AAAGCATACATGATGGAAGA+AGG + tig0019363:129693-129712 None:intergenic 35.0%
TTCCATCATGTATGCTTTCT+AGG - tig0019363:129695-129714 Msa1373170:intron 35.0%
! TACCTAGAAAGCATACATGA+TGG + tig0019363:129700-129719 None:intergenic 35.0%
TATGCTTTCTAGGTATCACT+TGG - tig0019363:129705-129724 Msa1373170:intron 35.0%
ATGCTTTCTAGGTATCACTT+GGG - tig0019363:129706-129725 Msa1373170:intron 35.0%
GTGAAAAAAGGGTCACAAAT+TGG + tig0019363:129733-129752 None:intergenic 35.0%
AAGCATCACATGACAAATGA+GGG + tig0019363:129813-129832 None:intergenic 35.0%
! AAAGCATCACATGACAAATG+AGG + tig0019363:129814-129833 None:intergenic 35.0%
CCATGAAGATAGAATTGCTT+CGG + tig0019363:129993-130012 None:intergenic 35.0%
ATATCTAGGGAGGACTTTAA+TGG - tig0019363:130065-130084 Msa1373170:intron 35.0%
TTTCTCTGACCATTCAAAAG+AGG - tig0019363:130162-130181 Msa1373170:intron 35.0%
AACTAAGTAATAACTGGCAG+CGG - tig0019363:130224-130243 Msa1373170:intron 35.0%
GACCGATACTTACTTATCTT+TGG - tig0019363:130293-130312 Msa1373170:intron 35.0%
CGATACTTACTTATCTTTGG+AGG - tig0019363:130296-130315 Msa1373170:intron 35.0%
! TACTTACTTATCTTTGGAGG+GGG - tig0019363:130299-130318 Msa1373170:intron 35.0%
CAAACAATTAGATGGAGTCT+CGG + tig0019363:130421-130440 None:intergenic 35.0%
TAAACCATTTGATGTACACG+CGG - tig0019363:130675-130694 Msa1373170:intron 35.0%
TATTACTTCAAGTCAAACCG+AGG - tig0019363:130911-130930 Msa1373170:intron 35.0%
! ATACTTTTGCCTACAAACCT+CGG + tig0019363:130931-130950 None:intergenic 35.0%
AGTACTGTACCATCAATTAC+TGG - tig0019363:131075-131094 Msa1373170:CDS 35.0%
ATATGTGTATCTCGACGTAT+AGG - tig0019363:131139-131158 Msa1373170:intron 35.0%
! CGTATAGGTTTGTTCACTAA+TGG - tig0019363:131154-131173 Msa1373170:intron 35.0%
! AATGGCCCAATCTTCTAAAA+TGG - tig0019363:131172-131191 Msa1373170:intron 35.0%
!! ATGGCCCAATCTTCTAAAAT+GGG - tig0019363:131173-131192 Msa1373170:intron 35.0%
! TGTTTAAGGTACTCTTGTTC+AGG - tig0019363:131267-131286 Msa1373170:CDS 35.0%
!! TCCTGGGTCATTTTAAATCT+AGG + tig0019363:131504-131523 None:intergenic 35.0%
CTTTGATAAGTTATAGGTCC+TGG + tig0019363:131521-131540 None:intergenic 35.0%
CAGGACCTATAACTTATCAA+AGG - tig0019363:131519-131538 Msa1373170:intron 35.0%
!! TGGATGGAGAACTACTTTTA+AGG - tig0019363:131657-131676 Msa1373170:intron 35.0%
AATCAGTAAATTCACAACCC+AGG + tig0019363:131821-131840 None:intergenic 35.0%
!! TATACTCCTTGTTATTCTGC+AGG - tig0019363:131905-131924 Msa1373170:intron 35.0%
!! ATACTCCTTGTTATTCTGCA+GGG - tig0019363:131906-131925 Msa1373170:intron 35.0%
! GATGTACTTGTATCTTTTGG+AGG - tig0019363:132180-132199 Msa1373170:intron 35.0%
!! GTATCTTTTGGAGGATACAA+TGG - tig0019363:132189-132208 Msa1373170:intron 35.0%
! AGGACATGAAGGGAAAATTT+TGG - tig0019363:132450-132469 Msa1373170:intron 35.0%
!! GAAAATTTTGGAAATTGCCG+TGG - tig0019363:132462-132481 Msa1373170:intron 35.0%
! AAGCTTTTAGATCCTCTGAA+AGG + tig0019363:132742-132761 None:intergenic 35.0%
AAATGACTCGATGACAGATT+TGG + tig0019363:132881-132900 None:intergenic 35.0%
GGTATCATACAGAAATCCAA+AGG - tig0019363:133076-133095 Msa1373170:intron 35.0%
ACTAGAATCATCACTCAGTA+AGG - tig0019363:133135-133154 Msa1373170:CDS 35.0%
AAGGTCAGAGTTATTAGACT+CGG + tig0019363:133203-133222 None:intergenic 35.0%
!! TTTCTAGAGCTTTGAGTTGT+AGG - tig0019363:133379-133398 Msa1373170:intron 35.0%
!! TTCTAGAGCTTTGAGTTGTA+GGG - tig0019363:133380-133399 Msa1373170:intron 35.0%
! AAACACTTTCTTTTGTCTCC+TGG - tig0019363:133439-133458 Msa1373170:intron 35.0%
TTGTCAGGGCACAAAATATA+AGG + tig0019363:133589-133608 None:intergenic 35.0%
TAGGTTAGTAGTCAGATGAA+TGG + tig0019363:133791-133810 None:intergenic 35.0%
ATCACAACAATGAAGGATTC+AGG + tig0019363:133979-133998 None:intergenic 35.0%
TTCATTCATCATCTGCATTC+TGG + tig0019363:134303-134322 None:intergenic 35.0%
! ATTGTTGTTCAGTTAAGCCA+AGG + tig0019363:134326-134345 None:intergenic 35.0%
CTGAACAACAATGCTTCATT+TGG - tig0019363:134334-134353 Msa1373170:exon 35.0%
! AGATTTAGCTTCTATTTGGG+CGG - tig0019363:134428-134447 Msa1373170:five_prime_UTR 35.0%
! AGGAAAATTTTCCACACATG+AGG - tig0019363:134451-134470 Msa1373170:five_prime_UTR 35.0%
CATACTATAATCCTCATGTG+TGG + tig0019363:134465-134484 None:intergenic 35.0%
! CTGGTTTGCAATATCCAGAA+CGG - tig0019363:125461-125480 Msa1373170:CDS 40.0%
CAAAAAACGCAATGCAATGC+AGG + tig0019363:125621-125640 None:intergenic 40.0%
CGTGTTATGAAAATTAGGCG+TGG - tig0019363:125853-125872 Msa1373170:intron 40.0%
! TTTTCGTTAGGAGTCAACAG+CGG - tig0019363:125974-125993 Msa1373170:intron 40.0%
ATGATCACTCGGTCTGATAT+AGG - tig0019363:126011-126030 Msa1373170:intron 40.0%
GGTCTGATATAGGATCTGTT+TGG - tig0019363:126021-126040 Msa1373170:intron 40.0%
TACAAGCTTATGGACCTGTT+TGG + tig0019363:126297-126316 None:intergenic 40.0%
GTTGTTGTAGCACTTGACAT+TGG - tig0019363:126317-126336 Msa1373170:intron 40.0%
AGTGCACTTCATCTGAATGT+AGG + tig0019363:126348-126367 None:intergenic 40.0%
! TTGTCATTTCAGGCTAGTGT+AGG - tig0019363:126600-126619 Msa1373170:CDS 40.0%
! TTTTCCATGAACTGGGTTCT+GGG + tig0019363:126638-126657 None:intergenic 40.0%
! ATTTTCCATGAACTGGGTTC+TGG + tig0019363:126639-126658 None:intergenic 40.0%
ACCCAGTTCATGGAAAATTG+TGG - tig0019363:126641-126660 Msa1373170:CDS 40.0%
! CTCCACAATTTTCCATGAAC+TGG + tig0019363:126646-126665 None:intergenic 40.0%
AATATTCTCGAGAGCAGGAA+TGG + tig0019363:127104-127123 None:intergenic 40.0%
AGTACTTACTGAGCACGATA+TGG - tig0019363:127502-127521 Msa1373170:intron 40.0%
GATTTCATGATATGGCACCA+AGG - tig0019363:127675-127694 Msa1373170:intron 40.0%
!! CTGATTCTACCTTTCTGGTT+TGG - tig0019363:127843-127862 Msa1373170:intron 40.0%
ATTATGCTGCCAAACCAGAA+AGG + tig0019363:127855-127874 None:intergenic 40.0%
GTGTTCCCATTCTCAATTAC+TGG + tig0019363:127890-127909 None:intergenic 40.0%
!! TGGAAATCAAGTTGGAACAC+AGG - tig0019363:127943-127962 Msa1373170:intron 40.0%
GATGTTGTTATGGAAGGCTT+TGG - tig0019363:127971-127990 Msa1373170:intron 40.0%
CAGTTGGAGTCTATGATCAA+TGG - tig0019363:127996-128015 Msa1373170:intron 40.0%
TTTGGACGTTGACCAGATAT+TGG + tig0019363:128031-128050 None:intergenic 40.0%
! AAAACCTCATATCGGGCTTT+TGG + tig0019363:128049-128068 None:intergenic 40.0%
! AAAAGCCCGATATGAGGTTT+TGG - tig0019363:128048-128067 Msa1373170:intron 40.0%
AAGAGCCAAAACCTCATATC+GGG + tig0019363:128056-128075 None:intergenic 40.0%
CAAGAGCCAAAACCTCATAT+CGG + tig0019363:128057-128076 None:intergenic 40.0%
CAAATAAACGCACTTGGCTT+AGG + tig0019363:128141-128160 None:intergenic 40.0%
GCTGAACAAATAAACGCACT+TGG + tig0019363:128147-128166 None:intergenic 40.0%
GTGCGTTTATTTGTTCAGCA+TGG - tig0019363:128148-128167 Msa1373170:intron 40.0%
!!! AGGTTTTGGATTTGAGAAGC+TGG - tig0019363:128459-128478 Msa1373170:intron 40.0%
TTGGTCAAAGCTTGAGGTTA+AGG - tig0019363:128484-128503 Msa1373170:intron 40.0%
ACATGGATCCAAAGTTGTAG+AGG + tig0019363:128522-128541 None:intergenic 40.0%
CTATGTCACTACAGATTGCA+TGG - tig0019363:128651-128670 Msa1373170:intron 40.0%
ATGTCACTACAGATTGCATG+GGG - tig0019363:128653-128672 Msa1373170:intron 40.0%
AATAAGCTCCTGTCAATTGC+CGG - tig0019363:128677-128696 Msa1373170:intron 40.0%
! TTTCGGAAGGATCTTTTGTG+TGG + tig0019363:128703-128722 None:intergenic 40.0%
ATACCTTGGATACTTTCGGA+AGG + tig0019363:128716-128735 None:intergenic 40.0%
! TGGTCAACTCTAAAGACCTA+TGG - tig0019363:129209-129228 Msa1373170:CDS 40.0%
! GGTCAACTCTAAAGACCTAT+GGG - tig0019363:129210-129229 Msa1373170:CDS 40.0%
ACATAATAGACACATACCGG+AGG + tig0019363:129239-129258 None:intergenic 40.0%
GGGCTTATAATTAGGTAGAG+AGG - tig0019363:129518-129537 Msa1373170:intron 40.0%
!! GTAGAGAGGGAGTATCATTT+AGG - tig0019363:129532-129551 Msa1373170:intron 40.0%
! AGCATACATGATGGAAGAAG+GGG + tig0019363:129691-129710 None:intergenic 40.0%
TGCTTTCTAGGTATCACTTG+GGG - tig0019363:129707-129726 Msa1373170:intron 40.0%
GACAAATGAGGGAACTAAAC+AGG + tig0019363:129802-129821 None:intergenic 40.0%
GATGCTTTGTAGATATCACG+TGG - tig0019363:129826-129845 Msa1373170:CDS 40.0%
! TACTAAGGTATTCCCGACAA+GGG + tig0019363:129866-129885 None:intergenic 40.0%
! TTACTAAGGTATTCCCGACA+AGG + tig0019363:129867-129886 None:intergenic 40.0%
CTTGAATGACCTGCATATTC+TGG - tig0019363:129918-129937 Msa1373170:intron 40.0%
TTTCCAAGTCCAGAATATGC+AGG + tig0019363:129930-129949 None:intergenic 40.0%
ATCAATTTCGTCCCATGTCA+TGG + tig0019363:129953-129972 None:intergenic 40.0%
CCGAAGCAATTCTATCTTCA+TGG - tig0019363:129990-130009 Msa1373170:intron 40.0%
AACTTATCAGAACTATGGGG+AGG - tig0019363:130023-130042 Msa1373170:intron 40.0%
ACTTATCAGAACTATGGGGA+GGG - tig0019363:130024-130043 Msa1373170:intron 40.0%
! AGGGAGGACTTTAATGGTTT+TGG - tig0019363:130071-130090 Msa1373170:intron 40.0%
! GGGAGGACTTTAATGGTTTT+GGG - tig0019363:130072-130091 Msa1373170:intron 40.0%
CTTCATAACTGATCAGGCAA+TGG + tig0019363:130380-130399 None:intergenic 40.0%
TTGCCTGATCAGTTATGAAG+TGG - tig0019363:130380-130399 Msa1373170:intron 40.0%
AGTCCACTTCATAACTGATC+AGG + tig0019363:130386-130405 None:intergenic 40.0%
TGATCAGTTATGAAGTGGAC+TGG - tig0019363:130385-130404 Msa1373170:intron 40.0%
GACTCCATCTAATTGTTTGC+AGG - tig0019363:130422-130441 Msa1373170:intron 40.0%
! GTTTGCAGGAATTTTGCAGA+TGG - tig0019363:130436-130455 Msa1373170:intron 40.0%
! CAGGAATTTTGCAGATGGAA+TGG - tig0019363:130441-130460 Msa1373170:intron 40.0%
!! TTTAGTTTGACCCACAGCAT+AGG + tig0019363:130705-130724 None:intergenic 40.0%
CTGTACCATCAATTACTGGT+TGG - tig0019363:131079-131098 Msa1373170:CDS 40.0%
TGGAACCAACCAGTAATTGA+TGG + tig0019363:131087-131106 None:intergenic 40.0%
AATGTAGAGCGAGATTCAAG+TGG - tig0019363:131227-131246 Msa1373170:CDS 40.0%
TGTTCAGGAAAAACACCTTG+TGG - tig0019363:131282-131301 Msa1373170:CDS 40.0%
!! AACGCGTTGATAACTCAAAC+AGG + tig0019363:131375-131394 None:intergenic 40.0%
TCCCTCATAAGGCAATTGAT+GGG + tig0019363:131444-131463 None:intergenic 40.0%
TTCCCTCATAAGGCAATTGA+TGG + tig0019363:131445-131464 None:intergenic 40.0%
! GCCTAGATTTAAAATGACCC+AGG - tig0019363:131500-131519 Msa1373170:intron 40.0%
!! TACTCCTTGTTATTCTGCAG+GGG - tig0019363:131907-131926 Msa1373170:intron 40.0%
AGAGACGGTTGTACTGAATA+TGG - tig0019363:131934-131953 Msa1373170:intron 40.0%
TCAGTGGTAACATCTGTTCA+AGG - tig0019363:131971-131990 Msa1373170:intron 40.0%
CAGTGGTAACATCTGTTCAA+GGG - tig0019363:131972-131991 Msa1373170:intron 40.0%
AAGGATGCCTAATGACATCA+AGG + tig0019363:132080-132099 None:intergenic 40.0%
AGGGATAACAGAGCAGAAAT+GGG + tig0019363:132254-132273 None:intergenic 40.0%
AAGGGATAACAGAGCAGAAA+TGG + tig0019363:132255-132274 None:intergenic 40.0%
AGCGAGAATGACAAAGCAAA+GGG + tig0019363:132273-132292 None:intergenic 40.0%
!! TGATTTGACTTGCTGCTTTC+AGG - tig0019363:132297-132316 Msa1373170:intron 40.0%
AGCATTTGTAGCATTTGGGA+CGG + tig0019363:132401-132420 None:intergenic 40.0%
GGGTAGCATTTGTAGCATTT+GGG + tig0019363:132405-132424 None:intergenic 40.0%
AAATTCAGATCCTGTATCGC+GGG + tig0019363:132425-132444 None:intergenic 40.0%
CAAATTCAGATCCTGTATCG+CGG + tig0019363:132426-132445 None:intergenic 40.0%
! AATTTGGAGCAGGACATGAA+GGG - tig0019363:132440-132459 Msa1373170:CDS 40.0%
!!! GAAGCAGTTTTTTCCAGCAT+TGG - tig0019363:132547-132566 Msa1373170:intron 40.0%
ATTGCTAACACAACCAATGC+TGG + tig0019363:132563-132582 None:intergenic 40.0%
! TTTTCTTGGTTGCATGCCTT+TGG - tig0019363:132648-132667 Msa1373170:intron 40.0%
TGAAAGGCTATAAACAGAGG+AGG + tig0019363:132726-132745 None:intergenic 40.0%
! CTCTGAAAGGCTATAAACAG+AGG + tig0019363:132729-132748 None:intergenic 40.0%
CTCTGTTTATAGCCTTTCAG+AGG - tig0019363:132727-132746 Msa1373170:intron 40.0%
TGAAAGGCTATAAACAGAGG+AGG + tig0019363:132726-132745 None:intergenic 40.0%
! CTCTGAAAGGCTATAAACAG+AGG + tig0019363:132729-132748 None:intergenic 40.0%
GCACACAGAACTTGCATTTA+TGG - tig0019363:132928-132947 Msa1373170:intron 40.0%
GCGCATCATTTAAATGATGC+AGG + tig0019363:132990-133009 None:intergenic 40.0%
! ATATTAAAGCAGGTACTGCC+AGG + tig0019363:133052-133071 None:intergenic 40.0%
GACTGATATGAGATCACCTT+TGG + tig0019363:133095-133114 None:intergenic 40.0%
TGATCTCATATCAGTCCTGA+AGG - tig0019363:133099-133118 Msa1373170:CDS 40.0%
TCTTCAACTAAAGCAAGAGC+TGG - tig0019363:133171-133190 Msa1373170:intron 40.0%
!! TCTTTTGTCTCCTGGTCTTT+TGG - tig0019363:133447-133466 Msa1373170:intron 40.0%
!! CTTTTGTCTCCTGGTCTTTT+GGG - tig0019363:133448-133467 Msa1373170:intron 40.0%
!! TTTTGTCTCCTGGTCTTTTG+GGG - tig0019363:133449-133468 Msa1373170:intron 40.0%
GTTGAGACGTAAGCAGAATA+AGG - tig0019363:133479-133498 Msa1373170:intron 40.0%
! ATTTTGTGCCCTGACAATGT+AGG - tig0019363:133592-133611 Msa1373170:intron 40.0%
! GTCAAGGTGTTTCAAACTTG+AGG - tig0019363:133652-133671 Msa1373170:intron 40.0%
AGGTATGCATTCATGCTTCT+TGG - tig0019363:133672-133691 Msa1373170:intron 40.0%
ACGCTCACAAGTCATAAAGA+CGG + tig0019363:133705-133724 None:intergenic 40.0%
TTGGCTGTTGCTCTATGAAT+AGG + tig0019363:133810-133829 None:intergenic 40.0%
TATATATTTGAGTGCGCAGG+TGG - tig0019363:134117-134136 Msa1373170:intron 40.0%
! GGTCAGAAGCTCCAAAATTT+TGG - tig0019363:134154-134173 Msa1373170:intron 40.0%
! CTGCTTTAAGTGCAAAACAG+AGG - tig0019363:134233-134252 Msa1373170:CDS 40.0%
TTTAAGTGCAAAACAGAGGC+AGG - tig0019363:134237-134256 Msa1373170:CDS 40.0%
TTAAGTGCAAAACAGAGGCA+GGG - tig0019363:134238-134257 Msa1373170:CDS 40.0%
TGCAGATGATGAATGAACCT+TGG - tig0019363:134306-134325 Msa1373170:CDS 40.0%
GCTGATGACTGTATTCAAAG+TGG - tig0019363:134517-134536 Msa1373170:five_prime_UTR 40.0%
ATCAGAAATGTCGATGGCGA+TGG - tig0019363:125426-125445 Msa1373170:three_prime_UTR 45.0%
! GAAGAAGAGCGGTGGATTTA+GGG + tig0019363:125558-125577 None:intergenic 45.0%
! AGAAGAAGAGCGGTGGATTT+AGG + tig0019363:125559-125578 None:intergenic 45.0%
CGCAATGCAATGCAGGTAAA+AGG + tig0019363:125614-125633 None:intergenic 45.0%
AGTGATCATGTAGCCAATGG+TGG + tig0019363:126000-126019 None:intergenic 45.0%
! CCATTGGCTACATGATCACT+CGG - tig0019363:126000-126019 Msa1373170:intron 45.0%
TCACAAGTGCCTATGTCAGT+AGG - tig0019363:126252-126271 Msa1373170:intron 45.0%
ACTGTTCAAGCTTCAGCTTG+TGG - tig0019363:126479-126498 Msa1373170:intron 45.0%
!! TGGGGCCCAATGAGTTTTAA+TGG - tig0019363:126863-126882 Msa1373170:intron 45.0%
TGGAAGACATGTTTCCAAGC+TGG + tig0019363:127158-127177 None:intergenic 45.0%
AAAAAGACGCATGGCTTCTG+TGG + tig0019363:127178-127197 None:intergenic 45.0%
GTTGTGTAGGAAGAAGATCC+TGG - tig0019363:127296-127315 Msa1373170:CDS 45.0%
TGTAGGAAGAAGATCCTGGT+TGG - tig0019363:127300-127319 Msa1373170:CDS 45.0%
GATGCTCTTGAATACCAACC+AGG + tig0019363:127317-127336 None:intergenic 45.0%
! ATGGAAGGCTTTGGTTCAGT+TGG - tig0019363:127980-127999 Msa1373170:intron 45.0%
TGGATTGCACCTCCAATATC+TGG - tig0019363:128016-128035 Msa1373170:intron 45.0%
TGGATTTGAGAAGCTGGACT+TGG - tig0019363:128465-128484 Msa1373170:intron 45.0%
TCAAAGCTTGAGGTTAAGGC+TGG - tig0019363:128488-128507 Msa1373170:intron 45.0%
ACAACTTTGGATCCATGTGC+TGG - tig0019363:128524-128543 Msa1373170:intron 45.0%
!! GATCCTTCCGAAAGTATCCA+AGG - tig0019363:128710-128729 Msa1373170:intron 45.0%
TAGGGAAACTCAAAGTGCAG+AGG + tig0019363:128897-128916 None:intergenic 45.0%
TTTCCCTAGTTCAGAGACGA+AGG - tig0019363:128909-128928 Msa1373170:intron 45.0%
ACTCCTTCGTCTCTGAACTA+GGG + tig0019363:128915-128934 None:intergenic 45.0%
AACTCCTTCGTCTCTGAACT+AGG + tig0019363:128916-128935 None:intergenic 45.0%
AAAGACCTATGGGAAACCTC+CGG - tig0019363:129220-129239 Msa1373170:CDS 45.0%
GCTTTGTAGATATCACGTGG+AGG - tig0019363:129829-129848 Msa1373170:CDS 45.0%
TGACCTGCATATTCTGGACT+TGG - tig0019363:129924-129943 Msa1373170:intron 45.0%
TGGACTTGGAAACCATGACA+TGG - tig0019363:129938-129957 Msa1373170:intron 45.0%
GGACTTGGAAACCATGACAT+GGG - tig0019363:129939-129958 Msa1373170:intron 45.0%
CTTATCAGAACTATGGGGAG+GGG - tig0019363:130025-130044 Msa1373170:intron 45.0%
! GGAATCTCACCTTGTTGTGT+GGG + tig0019363:130473-130492 None:intergenic 45.0%
! TGGAATCTCACCTTGTTGTG+TGG + tig0019363:130474-130493 None:intergenic 45.0%
! GAGAACTGGTTCATTGTTGG+TGG - tig0019363:130530-130549 Msa1373170:intron 45.0%
! AACTGGTTCATTGTTGGTGG+CGG - tig0019363:130533-130552 Msa1373170:intron 45.0%
CAAGTCAAACCGAGGTTTGT+AGG - tig0019363:130919-130938 Msa1373170:intron 45.0%
! AATGGGTGTGTTGTTCTGTG+TGG - tig0019363:131413-131432 Msa1373170:intron 45.0%
TCCCCATCAATTGCCTTATG+AGG - tig0019363:131439-131458 Msa1373170:intron 45.0%
CCCTCATAAGGCAATTGATG+GGG + tig0019363:131443-131462 None:intergenic 45.0%
CCCCATCAATTGCCTTATGA+GGG - tig0019363:131440-131459 Msa1373170:intron 45.0%
!! TACTCTAAGGTGTGGTTACC+TGG - tig0019363:131800-131819 Msa1373170:CDS 45.0%
!! ACTCTAAGGTGTGGTTACCT+GGG - tig0019363:131801-131820 Msa1373170:CDS 45.0%
TGTACTGAATATGGCTACCC+TGG - tig0019363:131943-131962 Msa1373170:intron 45.0%
ATCAAGGCGATAGCAACGAT+TGG + tig0019363:132064-132083 None:intergenic 45.0%
GCTATCGCCTTGATGTCATT+AGG - tig0019363:132070-132089 Msa1373170:intron 45.0%
GTTAATCAGTGGGCACTAGA+AGG + tig0019363:132099-132118 None:intergenic 45.0%
GTCATTACAGGGCTTGAGTT+TGG - tig0019363:132134-132153 Msa1373170:intron 45.0%
GGGATAACAGAGCAGAAATG+GGG + tig0019363:132253-132272 None:intergenic 45.0%
GAGCGAGAATGACAAAGCAA+AGG + tig0019363:132274-132293 None:intergenic 45.0%
!! TGGATTGCAAGGTCGATTTG+TGG + tig0019363:132342-132361 None:intergenic 45.0%
CGGGTAGCATTTGTAGCATT+TGG + tig0019363:132406-132425 None:intergenic 45.0%
CGCGATACAGGATCTGAATT+TGG - tig0019363:132424-132443 Msa1373170:CDS 45.0%
! ACAGGATCTGAATTTGGAGC+AGG - tig0019363:132430-132449 Msa1373170:CDS 45.0%
! GAATTTGGAGCAGGACATGA+AGG - tig0019363:132439-132458 Msa1373170:CDS 45.0%
!!! TCCTGGTCTTTTGGGGTAAT+CGG - tig0019363:133456-133475 Msa1373170:intron 45.0%
TTGGAGCTCCTACATTGTCA+GGG + tig0019363:133603-133622 None:intergenic 45.0%
ATTGGAGCTCCTACATTGTC+AGG + tig0019363:133604-133623 None:intergenic 45.0%
CGCTCACAAGTCATAAAGAC+GGG + tig0019363:133704-133723 None:intergenic 45.0%
! TTTAGCTTCTATTTGGGCGG+AGG - tig0019363:134431-134450 Msa1373170:five_prime_UTR 45.0%
!! GCATCTTACGTCGGTTTGGA+TGG - tig0019363:125496-125515 Msa1373170:CDS 50.0%
GCTATAGAGAAGAAGAGCGG+TGG + tig0019363:125566-125585 None:intergenic 50.0%
CCGAGTGATCATGTAGCCAA+TGG + tig0019363:126003-126022 None:intergenic 50.0%
!! CTGGGTTCTGGGATGTTACA+AGG + tig0019363:126627-126646 None:intergenic 50.0%
ACATCCCAGAACCCAGTTCA+TGG - tig0019363:126631-126650 Msa1373170:CDS 50.0%
TGATGCAGTTGGAACCAGCT+TGG - tig0019363:127141-127160 Msa1373170:intron 50.0%
GGACGTTGACCAGATATTGG+AGG + tig0019363:128028-128047 None:intergenic 50.0%
ACGTCCAAAAGCCCGATATG+AGG - tig0019363:128042-128061 Msa1373170:intron 50.0%
TAAACGCACTTGGCTTAGGG+AGG + tig0019363:128137-128156 None:intergenic 50.0%
! CTGGACTTGGTCAAAGCTTG+AGG - tig0019363:128478-128497 Msa1373170:intron 50.0%
CGACGAGTCCTCTACAACTT+TGG - tig0019363:128511-128530 Msa1373170:intron 50.0%
! TCCATGTGCTGGCCATTCTT+TGG - tig0019363:128535-128554 Msa1373170:intron 50.0%
ACCAAAGAATGGCCAGCACA+TGG + tig0019363:128539-128558 None:intergenic 50.0%
! GGAAGGATCTTTTGTGTGGC+CGG + tig0019363:128699-128718 None:intergenic 50.0%
GGAAACTCAAAGTGCAGAGG+CGG + tig0019363:128894-128913 None:intergenic 50.0%
ACATACCGGAGGTTTCCCAT+AGG + tig0019363:129228-129247 None:intergenic 50.0%
AAGGAGAAGAGAGAGGGAGT+GGG + tig0019363:129613-129632 None:intergenic 50.0%
AAAGGAGAAGAGAGAGGGAG+TGG + tig0019363:129614-129633 None:intergenic 50.0%
! TTGGTGGGCAAGATGCAAAG+AGG - tig0019363:129890-129909 Msa1373170:CDS 50.0%
GTATGATCAGACCTTGGGGA+AGG + tig0019363:130257-130276 None:intergenic 50.0%
AGCGGTATGATCAGACCTTG+GGG + tig0019363:130261-130280 None:intergenic 50.0%
CAGCGGTATGATCAGACCTT+GGG + tig0019363:130262-130281 None:intergenic 50.0%
TCATACCGCTGCTGTACATG+TGG - tig0019363:130271-130290 Msa1373170:intron 50.0%
GACATGCTGGTGTGACAGTA+GGG - tig0019363:130507-130526 Msa1373170:intron 50.0%
ACATGCTGGTGTGACAGTAG+GGG - tig0019363:130508-130527 Msa1373170:intron 50.0%
! GGGGAGAACTGGTTCATTGT+TGG - tig0019363:130527-130546 Msa1373170:intron 50.0%
GAAGCCCCTGCAGAATAACA+AGG + tig0019363:131914-131933 None:intergenic 50.0%
TGAATATGGCTACCCTGGCT+TGG - tig0019363:131948-131967 Msa1373170:intron 50.0%
TGTTACCACTGACCAAGCCA+GGG + tig0019363:131963-131982 None:intergenic 50.0%
ATGTTACCACTGACCAAGCC+AGG + tig0019363:131964-131983 None:intergenic 50.0%
! GCGTGTTTCTGTTGCTAGTG+AGG - tig0019363:131994-132013 Msa1373170:intron 50.0%
!! TGCAAGGTCGATTTGTGGCT+TGG + tig0019363:132337-132356 None:intergenic 50.0%
GGCAGAAACACTGTCTGGTA+TGG + tig0019363:132380-132399 None:intergenic 50.0%
ACAAATGCTACCCGCGATAC+AGG - tig0019363:132412-132431 Msa1373170:CDS 50.0%
GATCTACGCTTGTGAGCCAA+AGG + tig0019363:132667-132686 None:intergenic 50.0%
GGCAGAACATGCAGAGTTTG+AGG + tig0019363:132969-132988 None:intergenic 50.0%
GTTCTTCTCTCTCAGCCTTC+AGG + tig0019363:133117-133136 None:intergenic 50.0%
!!! CCTGGTCTTTTGGGGTAATC+GGG - tig0019363:133457-133476 Msa1373170:intron 50.0%
TAGGAGCTCCAATCAGTACG+TGG - tig0019363:133611-133630 Msa1373170:intron 50.0%
GTGGCATTTGCCTCCTTTCA+TGG - tig0019363:134029-134048 Msa1373170:intron 50.0%
TTGCCTCCTTTCATGGACGA+AGG - tig0019363:134036-134055 Msa1373170:intron 50.0%
CTTCCTTCGTCCATGAAAGG+AGG + tig0019363:134042-134061 None:intergenic 50.0%
CCACTTCCTTCGTCCATGAA+AGG + tig0019363:134045-134064 None:intergenic 50.0%
CCTTTCATGGACGAAGGAAG+TGG - tig0019363:134042-134061 Msa1373170:intron 50.0%
ATATTTGAGTGCGCAGGTGG+AGG - tig0019363:134120-134139 Msa1373170:intron 50.0%
CAGGTGGAGGTTGCTGAATT+AGG - tig0019363:134133-134152 Msa1373170:intron 50.0%
TCATCATCTGCATTCTGGCC+AGG + tig0019363:134298-134317 None:intergenic 50.0%
TCCAGAACGGTTCTACGCTG+CGG - tig0019363:125474-125493 Msa1373170:CDS 55.0%
TACGCTGCGGCATCTTACGT+CGG - tig0019363:125487-125506 Msa1373170:CDS 55.0%
! TGCGGCATCTTACGTCGGTT+TGG - tig0019363:125492-125511 Msa1373170:CDS 55.0%
TGGAGCATAGCAAATGGGCC+AGG - tig0019363:126661-126680 Msa1373170:CDS 55.0%
TTGTGTGGCCGGCAATTGAC+AGG + tig0019363:128688-128707 None:intergenic 55.0%
AGGAGAAGAGAGAGGGAGTG+GGG + tig0019363:129612-129631 None:intergenic 55.0%
GGCCAATCAGTGTCCCTTGT+CGG - tig0019363:129850-129869 Msa1373170:CDS 55.0%
GCCAATCAGTGTCCCTTGTC+GGG - tig0019363:129851-129870 Msa1373170:CDS 55.0%
TCCCGACAAGGGACACTGAT+TGG + tig0019363:129855-129874 None:intergenic 55.0%
TGATCAGACCTTGGGGAAGG+AGG + tig0019363:130254-130273 None:intergenic 55.0%
GCAGCGGTATGATCAGACCT+TGG + tig0019363:130263-130282 None:intergenic 55.0%
TCGGTCCACATGTACAGCAG+CGG + tig0019363:130279-130298 None:intergenic 55.0%
TGGTCTCGTCCCACACAACA+AGG - tig0019363:130461-130480 Msa1373170:intron 55.0%
GGACATGCTGGTGTGACAGT+AGG - tig0019363:130506-130525 Msa1373170:intron 55.0%
GTGTGACAGTAGGGGAGAAC+TGG - tig0019363:130516-130535 Msa1373170:intron 55.0%
TTCTGCAGGGGCTTCAGAGA+CGG - tig0019363:131919-131938 Msa1373170:intron 55.0%
CCCGATTACCCCAAAAGACC+AGG + tig0019363:133460-133479 None:intergenic 55.0%
! CGAGCTGACCACGTACTGAT+TGG + tig0019363:133622-133641 None:intergenic 55.0%
AGGAGCTTGAACTCCTCCAG+CGG - tig0019363:134188-134207 Msa1373170:CDS 55.0%
TGAACTCCTCCAGCGGCAAA+AGG - tig0019363:134195-134214 Msa1373170:CDS 55.0%
! TGCATTCTGGCCAGGAGTAC+CGG + tig0019363:134290-134309 None:intergenic 55.0%
GCGATGGCGAGAGCAAGTTC+TGG - tig0019363:125442-125461 Msa1373170:exon 60.0%
GAGTCAACAGCGGCCACCAT+TGG - tig0019363:125984-126003 Msa1373170:intron 60.0%
GGAGAAGAGAGAGGGAGTGG+GGG + tig0019363:129611-129630 None:intergenic 60.0%
GAGATTCCAACGCCACGTGC+AGG - tig0019363:130485-130504 Msa1373170:intron 60.0%
ACACCAGCATGTCCTGCACG+TGG + tig0019363:130500-130519 None:intergenic 60.0%
! GGTGGCGGTGACAACAAGAG+CGG - tig0019363:130548-130567 Msa1373170:intron 60.0%
CGCGCCGCGTGTACATCAAA+TGG + tig0019363:130682-130701 None:intergenic 60.0%
GGGACGGCAGAAACACTGTC+TGG + tig0019363:132385-132404 None:intergenic 60.0%
AGCTCGCTGCTGAGCAGTCA+AGG - tig0019363:133636-133655 Msa1373170:intron 60.0%
! ATGCAGCCTTTTGCCGCTGG+AGG + tig0019363:134204-134223 None:intergenic 60.0%
! CTGATGCAGCCTTTTGCCGC+TGG + tig0019363:134207-134226 None:intergenic 60.0%
GCAAAACAGAGGCAGGGCTC+AGG - tig0019363:134244-134263 Msa1373170:CDS 60.0%
AAACAGAGGCAGGGCTCAGG+TGG - tig0019363:134247-134266 Msa1373170:CDS 60.0%
GCCGCAGCGTAGAACCGTTC+TGG + tig0019363:125478-125497 None:intergenic 65.0%
AGAGAGAGGGAGTGGGGGCA+TGG + tig0019363:129606-129625 None:intergenic 65.0%
GCATGTCCTGCACGTGGCGT+TGG + tig0019363:130494-130513 None:intergenic 65.0%
ACGCCACGTGCAGGACATGC+TGG - tig0019363:130494-130513 Msa1373170:intron 65.0%
!! GGCTACCCTGGCTTGGTCAG+TGG - tig0019363:131955-131974 Msa1373170:intron 65.0%
!! GGTTGGCTTGCCGGTACTCC+TGG - tig0019363:134277-134296 Msa1373170:CDS 65.0%
! GCGGAGTGCCTCCTTCCCCA+AGG - tig0019363:130243-130262 Msa1373170:intron 70.0%
ACGCGGCGCGCCTATGCTGT+GGG - tig0019363:130692-130711 Msa1373170:intron 70.0%
GCAGGGCTCAGGTGGCGTGT+GGG - tig0019363:134255-134274 Msa1373170:CDS 70.0%
CAGGGCTCAGGTGGCGTGTG+GGG - tig0019363:134256-134275 Msa1373170:CDS 70.0%
GCTCAGGTGGCGTGTGGGGT+TGG - tig0019363:134260-134279 Msa1373170:CDS 70.0%
!! GGCGTGTGGGGTTGGCTTGC+CGG - tig0019363:134268-134287 Msa1373170:CDS 70.0%
CACGCGGCGCGCCTATGCTG+TGG - tig0019363:130691-130710 Msa1373170:intron 75.0%
GGCAGGGCTCAGGTGGCGTG+TGG - tig0019363:134254-134273 Msa1373170:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0019363 gene 125187 134586 125187 ID=Msa1373170;Name=Msa1373170
tig0019363 mRNA 125187 134586 125187 ID=Msa1373170-mRNA-1;Parent=Msa1373170;Name=Msa1373170-mRNA-1;_AED=0.09;_eAED=0.09;_QI=246|0.88|0.94|0.94|0.88|0.94|18|265|650
tig0019363 exon 125187 125637 125187 ID=Msa1373170-mRNA-1:exon:3144;Parent=Msa1373170-mRNA-1
tig0019363 exon 126100 126159 126100 ID=Msa1373170-mRNA-1:exon:3143;Parent=Msa1373170-mRNA-1
tig0019363 exon 126545 126685 126545 ID=Msa1373170-mRNA-1:exon:3142;Parent=Msa1373170-mRNA-1
tig0019363 exon 127272 127454 127272 ID=Msa1373170-mRNA-1:exon:3141;Parent=Msa1373170-mRNA-1
tig0019363 exon 127546 127629 127546 ID=Msa1373170-mRNA-1:exon:3140;Parent=Msa1373170-mRNA-1
tig0019363 exon 127758 127846 127758 ID=Msa1373170-mRNA-1:exon:3139;Parent=Msa1373170-mRNA-1
tig0019363 exon 129204 129318 129204 ID=Msa1373170-mRNA-1:exon:3138;Parent=Msa1373170-mRNA-1
tig0019363 exon 129403 129529 129403 ID=Msa1373170-mRNA-1:exon:3137;Parent=Msa1373170-mRNA-1
tig0019363 exon 129796 129935 129796 ID=Msa1373170-mRNA-1:exon:3136;Parent=Msa1373170-mRNA-1
tig0019363 exon 130037 130056 130037 ID=Msa1373170-mRNA-1:exon:3135;Parent=Msa1373170-mRNA-1
tig0019363 exon 131042 131108 131042 ID=Msa1373170-mRNA-1:exon:3134;Parent=Msa1373170-mRNA-1
tig0019363 exon 131217 131312 131217 ID=Msa1373170-mRNA-1:exon:3133;Parent=Msa1373170-mRNA-1
tig0019363 exon 131530 131607 131530 ID=Msa1373170-mRNA-1:exon:3132;Parent=Msa1373170-mRNA-1
tig0019363 exon 131710 131904 131710 ID=Msa1373170-mRNA-1:exon:3131;Parent=Msa1373170-mRNA-1
tig0019363 exon 132397 132468 132397 ID=Msa1373170-mRNA-1:exon:3130;Parent=Msa1373170-mRNA-1
tig0019363 exon 132561 132624 132561 ID=Msa1373170-mRNA-1:exon:3129;Parent=Msa1373170-mRNA-1
tig0019363 exon 133091 133161 133091 ID=Msa1373170-mRNA-1:exon:3128;Parent=Msa1373170-mRNA-1
tig0019363 exon 134176 134586 134176 ID=Msa1373170-mRNA-1:exon:3127;Parent=Msa1373170-mRNA-1
tig0019363 five_prime_UTR 134341 134586 134341 ID=Msa1373170-mRNA-1:five_prime_utr;Parent=Msa1373170-mRNA-1
tig0019363 CDS 134176 134340 134176 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 133091 133161 133091 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 132561 132624 132561 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 132397 132468 132397 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 131710 131904 131710 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 131530 131607 131530 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 131217 131312 131217 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 131042 131108 131042 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 130037 130056 130037 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 129796 129935 129796 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 129403 129529 129403 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 129204 129318 129204 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 127758 127846 127758 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 127546 127629 127546 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 127272 127454 127272 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 126545 126685 126545 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 126100 126159 126100 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 CDS 125452 125637 125452 ID=Msa1373170-mRNA-1:cds;Parent=Msa1373170-mRNA-1
tig0019363 three_prime_UTR 125187 125451 125187 ID=Msa1373170-mRNA-1:three_prime_utr;Parent=Msa1373170-mRNA-1
Gene Sequence

>Msa1373170

ATGTCGATGGCGATGGCGAGAGCAAGTTCTGGTTTGCAATATCCAGAACGGTTCTACGCTGCGGCATCTTACGTCGGTTTGGATGGATCCAATTCTCCAACTAAATCTCTTACATCTAAATTCCCTAAATCCACCGCTCTTCTTCTCTATAGCTTATATCAACAGGCTAGTGTAGGACCTTGTAACATCCCAGAACCCAGTTCATGGAAAATTGTGGAGCATAGCAAATGGGCCAGTTGGAACCAGCTTGGAAACATGTCTTCCACAGAAGCCATGCGTCTTTTTGTGAAAATATTGGAGGAAGAAGATCCTGGTTGGTATTCAAGAGCATCTAACTCTTTTGCAGAGCCTGTAATAGACGTTCAAATGAATCATAATTCCAAAGTTGAACCAGTAATTGAGAATGGGAACACTTATCCAGAGACAAAAACTATTTCCTCTGAAAATGGAAATCAAGTTGGAACACAGGATAAAGATGTTGTTATGGAAGGCTTTGGTTCAGTTGGAGTCTATGATCAATGGATTGCACCTCCAATATCTGGTCAACGTCCAAAAGCCCGATATGAGCATGGAGCTGCAGCTATGCAAGATAAATTGTACATATATGGTGGAAATCACAATGGCCGTTATCTTAGTGATCTTCATGTTTTGGATTTGAGAAGCTGGACTTGGTCAAAGCTTGAGGTTAAGGCTGGCGACGAGTCCTCTACAACTTTGGATCCATGTGCTGGCCATTCTTTGATTGCATGGGGAAATAAGCTCCTGTCAATTGCCGGCCACACAAAAGATCCTTCCGAAAGTATCCAAGGTATCACTTGGGGCCAATTTATATCACGTGGAGGCCAATCAGTGTCCCTTGTCGGGAATACCTTAGTAATTTTTGGTGGGCAAGATGCAAAGAGGACTCTCTTGAATGACCTGCATATTCTGGACTTGGAAACCATGACATGGGACGAAATTGATGCTGTCGGAGTGCCTCCTTCCCCAAGGTCTGATCATACCGCTGCTGTACATGTGGACCGATACTTACTTATCTTTGGAGGGGGTTCACATGCCACTTGCTACAATGATTTACATGTTCTCGATTTGCAAACTATGGAATGGTCTCGTCCCACACAACAAGGTGAGATTCCAACGCCACGTGCAGGACATGCTGGTGTGACAGTAGGGGAGAACTGGTTCATTGTTGGTGGCGGTGACAACAAGAGCGGGGCTTCAGAGACGGTTGTACTGAATATGGCTACCCTGGCTTGGTCAGTGGTAACATCTGTTCAAGGGCGTGTTTCTGTTGCTAGTGAGGGCTTGAGTTTGGTTGTAAGTTCATATAATGGCGAAGATGTACTTGTATCTTTTGGAGGATACAATGGACGTTACAACAGTGAAGTCTATGTTCTTAAACCAAGCCACAAATCGACCTTGCAATCCAAAATAATTGAAAATTCCATACCAGACAGTGTTTCTGCCGTCCCAAATGCTACAAATGCTACCCGCGATACAGGATCTGAATTTGGAGCAGGACATGAAGGGAAAATTTTGGAAATTGCCGTGGATAACTCTTATACAACAAAATCCAAAGGTGATCTCATATCAGTCCTGAAGGCTGAGAGAGAAGAACTAGAATCATCACTCAGTAAGGAGAAGCTGCATACTCTTCAACTAAAGCAAGAGCTGGCTGATGCCGAGTCTAATAACTCTGACCTTTACAAGGAGCTCCAATCAGTACGTGGTCAGCTCGCTGCTGAGCAGTCAAGGTGTTTCAAACTTGAGGTGGAGGTTGCTGAATTAGGTCAGAAGCTCCAAAATTTTGGAACATTACAAAAGGAGCTTGAACTCCTCCAGCGGCAAAAGGCTGCATCAGAGCAAGCTGCTTTAAGTGCAAAACAGAGGCAGGGCTCAGGTGGCGTGTGGGGTTGGCTTGCCGGTACTCCTGGCCAGAATGCAGATGATGAATGA
Protein sequence

>Msa1373170

MSMAMARASSGLQYPERFYAAASYVGLDGSNSPTKSLTSKFPKSTALLLYSLYQQASVGPCNIPEPSSWKIVEHSKWASWNQLGNMSSTEAMRLFVKILEEEDPGWYSRASNSFAEPVIDVQMNHNSKVEPVIENGNTYPETKTISSENGNQVGTQDKDVVMEGFGSVGVYDQWIAPPISGQRPKARYEHGAAAMQDKLYIYGGNHNGRYLSDLHVLDLRSWTWSKLEVKAGDESSTTLDPCAGHSLIAWGNKLLSIAGHTKDPSESIQGITWGQFISRGGQSVSLVGNTLVIFGGQDAKRTLLNDLHILDLETMTWDEIDAVGVPPSPRSDHTAAVHVDRYLLIFGGGSHATCYNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTVGENWFIVGGGDNKSGASETVVLNMATLAWSVVTSVQGRVSVASEGLSLVVSSYNGEDVLVSFGGYNGRYNSEVYVLKPSHKSTLQSKIIENSIPDSVSAVPNATNATRDTGSEFGAGHEGKILEIAVDNSYTTKSKGDLISVLKAEREELESSLSKEKLHTLQLKQELADAESNNSDLYKELQSVRGQLAAEQSRCFKLEVEVAELGQKLQNFGTLQKELELLQRQKAASEQAALSAKQRQGSGGVWGWLAGTPGQNADDE*